>input_sequence_68489
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----------ATGGAGTCATCTACAACTGATGCCGGTGATAAGCATTTGGAGAGCTACCTGACATTGGGTTTGACAGTAT
CGCAGTCAAAGAAAGGGAATACCAAGTTTCCAAAGGTCCTGTCGCTTCTTGCCACATATCTGGGCAGATCAGTTCAGAAG
AATGAAGAATTACTAGGTTCAAATGGAATAAAGGAGGCAGCCACCATCTTTCATGGCCAGAAGGTGCCAGATCTCAGTAT
ACAGCTCTATGCAGAACGCATC-TTCAAGTATGCTGAGTGCAGTCCATCCTG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTTTGTGTTGGCACTTGTCTACATGGAGAGATATCTACAGCAGC------------------
--------------------------------------------------------CAAATGTGTACATGACGCCCTTCA
GCGTTCATCGCTTGCTGATTACAAGTGTGGTGGTTGCTGCCAAATTCACAGATGACGCGTA------AG--TAC----CC
ACTGCACGTGGAATTCAGCTGTATTTTG-----TG-----TATATCGCAAACATGTACAGGTTTCCCAGTAACTTTCTCA
A---------------TGCATGTCGTGCAGGTTTTTCAACAATGCATTCTACGC----TAGAGTGGGAGGAATCCGCACA
ATCGAGATGAATCGGCTTGAACTGGATTTGTTATTTAATCTGGACTTCAGGCTGAAAGTGAACCTAGAGACG--TTTGGG
AGCTACTGCTTGCAACTGGAGAAACATGCACCGGTGTCACCAGAGAGACTGCCGGTTCAGGTTCATC------GTGTCAA
TGGATCTAAAGATTTGAGCTATAGCAACAGC---AGCGCCGACGAGTTTTGCCAGAGCAAGCTTGT------AAGCTACA
GCAGCCAGGCTCTCCAAGGATGCAGCTGA---------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr1D_1_TraesCS1D01G248800
ATCTCTATCTACCAAGCCTCTCCCTCCCGTGCGGGTTGTTAGCTGG------TAGATCTCAAGTTGCACAACATATAATG
CTATCCTACCTACCTTTGTAAGTAGCTAGGTGCGGCATTTGGGTCTAG-AGATGGGATTCCGGCCCAATCTGCCGCGCTC
TTCTTGCTCTGATCTCTCATCTCTTTCGAGCGAGCTAGGGTTGTGATCCCGAAGGAGCGCAGGAGGGTCGGGGAAGCAGA
AATCTGCTTGCCCGCGTGGTCTGATGGGGTCGTGTGCCGGGTACTTCGGA--------ATGGATTTGGGGGCAGCTGCAT
CAGGAAGGAGTGTTTCTTGCCACCTC-TTCATGGTTGTTTA-CCCCTCCTTTTGGTTGAGGGTTTAGGATTTCCCTTTAC
AAATGAGGCGAAATATTACCT------------------------TACCAAAAATAGAAGAGGAATAACCCTGTGGGTGG
CCCAAAAGGGAGCAACACCCAGCTCCCTACTTTGTACTACTGCTT----ATCTTCTGAAGCAGCTTGATGGTCGCAGAAA
AGGAAAAGGAAATAAGCAGATCCATGTTGATGTCTGTGGGTAGTACTCTACAACTTTGTACTAAATCAGCGACGAGTAAT
ATGGAGCGGAAGGAGTATATTCTTGCGTGTATTTGACACACTCCTTAGAGAATGCCAAGACTTGGAAACTGTATTTTCGA
TTGCTATGTTGTGCAATGAGAGGGGTCAATTCAGAGCAACGTGTGGAGGTAGCTTCTAAATTTAGTATATTCTTGGTTTG
GCTCCGCACCTT--ACGAGAATAGACGCAGCTATGGGTTTTGGTGCAATGCTATAATCCTG-GGGAAATTAGCTTCAGCC
TTCCTCTTCATCGTCTGATGTCCATCTTTAAATTTCTGCGTGGTTGACTGGTTGTACATAAACTGTCATCAACTTTTTTC
CACACCTTCAGCTTGTCTACTGTTTTCTCTACAGAAAATCTTGTTGATTAATAACTTGCTTCACC--TTTTACAGCACTT
ATGTCTGCCTATGGAGTCATCTACAACTGATGCCGGTGATAAGCATTTGGAGAGCTACCTGACATTGGGTTTGACAGTAT
CGCAGTCAAAGAAAGGGAATACCAAGTTTCCAAAGGTCCTGTCGCTTCTTGCCACATATCTGGGCAGATCAGTTCAGAAG
AATGAAGAATTACTAGGTTCAAATGGAATAAAGGAGGCAGCCACCATCTTTCATGGCCAGAAGGTGCCAGATCTCAGTAT
ACAGCTCTATGCAGAACGCATC-TTCAAGTATGCTGAGTGCAGTCCATCCTG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTTTGTGTTGGCACTTGTCTACATGGAGAGATATCTACAGCAGC------------------
--------------------------------------------------------CAAATGTGTACATGACGCCCTTCA
GCGTTCATCGCTTGCTGATTACAAGTGTGGTGGTTGCTGCCAAATTCACAGATGACGCGTA------AG--TAC----CC
ACTGCACGTGGAATTCAGCTGTATTTTG-----TG-----TATATCGCAAACATGTACAGGTTTCCCAGTAACTTTCTCA
A---------------TGCATGTCGTGCAGGTTTTTCAACAATGCATTCTACGC----TAGAGTGGGAGGAATCCGCACA
ATCGAGATGAATCGGCTTGAACTGGATTTGTTATTTAATCTGGACTTCAGGCTGAAAGTGAACCTAGAGACG--TTTGGG
AGCTACTGCTTGCAACTGGAGAAACATGCACCGGTGTCACCAGAGAGACTGCCGGTTCAGGTTCATC------GTGTCAA
TGGATCTAAAGATTTGAGCTATAGCAACAGC---AGCGCCGACGAGTTTTGCCAGAGCAAGCTTGT------AAGCTACA
GCAGCCAGGCTCTCCAAGGATGCAGCTGACCAATCTATTTATGGCCTAAAGTTTTGCAAAGCATGTGACCTGATTACTGA
TAATTCTTTTAGATCTGACATTTGTGCATTCAGATTGCATTAAGTTGTTCTGAGGGTGTTTGATTAGTAGGGATTCGATT
CTG--------------------------------------------------------CTTTACTTGTGTAACACTGTA
ATTCTTGCAAACCACTTTGTTTAAAATGTTCACAATCTAGTTGGGAAACACCAGGTCTGAATATTATTCA-GTCCTGTGA
T-TCCAATGCCGC--------------------------------------GGTTTTACCGGATCTGCTGCCAAGTAACC
TGTCGGC-AAGATGAATCTGGCTTTTCCAAGATCTGTGAATGGCCTGTGTTCGTTCTCTGTGCATCTTCTGATTCAG-TT
GAGTCGCATAACAGGATGTGTGATGATTTTCACCGGCATTGTTGCGACGAGGAATTTATAAAACGAATTACTTTCCTGAA
CACGAGACTATAACCACGAGGGACATCGCCGAAGCATGAAAACAGAACCAACACCTCGGATGCAAATTCAAGTCAGAATA
TTTGAGTGATGTAGCATATCATTCGAAACAGATGCTATGAAATGACTGGAACCACCAGCAGCTTCAACACCCCC----AC
GCTACTCTAGTTTTGTTATCTGTA----AGTAACATAAGC-AATTAGTTTTATGAGGGGG-AGAAACCATCCATACTGGT
GTTTTTCTG--------TCAGCTTTAAATTTCTTTATGTGTTATCTGGGCAGTCCTCAAACGTTATCCCTTAATTAGACT
ACCAGAGTTGATATCTGGGCAGTCGCAAAGAAAGCCACAATTCTAGTCACGAGGGGATTGTAAAATTAACTACTCCCTCC
GATCCATATTAATCGAGAGGGGAT--TGTAC----------GTGCAAGGAAAGGAAAATTCATATTCCTATGC-TTCTCC
TCCACTTTTCCTATGGATCAAAGAACAACTTGTCACCAGAGTACAAAGATAAAACAA---T-------------------
------ACAAATAATGTGATAGTAGTACACATGCATATTTATTACTATTCATTATTCAGGAGAAAG
>chr1B_1
ATCTCTATCTACCAAGCCTCTCCCTCCCGTGCGGTTTGTTGGCTAGTACTCCTAGATCTCAAGTTGCACAGC--ATAATG
CTATCCTACCTACTACCTGCGC-AGCTAGGTGCGGCATTTGGGTCTG---GATGGGATTCCCACTCAATCTGCCGTGCCC
TTCTTGCTCTAT-------TCTCTTTCGAGCGAGCTAGGGTTGG--TCCCGAAGGAGCGCAGGAGCGTCGGGGAAGCACA
AATCTGCTTGCCCGCGTGCTCTGATGGGGCGGTGTGCCGGCTACTTTGGG--------GTGGATTTGGGCGCAGCTGCGT
CAGGAAGGAGTGTTTCTTGCCACCTC-TTTATGGTTGTTTATCCCCTCCGTTTGGTTGAGGGTTTAGGATTTCCCTTTAT
AAATGAGGCGAAATATACCAAAAATACTTGTTTCAAAAATAATAATACCAAAAATAGAAGACGAATAACCCTCTGGATGC
CCCAAAAGGGAGCAACACCCAGCTACTTTGTGTCT-----TGCGT----ATCTTCTGA-------------------ATG
GGAAAAGGGAAAGGATTAGATTCATGCTGATGCTTGT-------------------------------------------
---------------TAATTTCTTGTGTGTGT------TTTGGTGCATTCCTTGCCAAGAC--TGAAACTGTATTC-CGA
TCAGTATGTTGTGCAATGAGAGAGCTAAGCATGGTGGTAGTACACCACTGCCTC----ACGG------AATCTTGGTTCG
GCTCCGCATCTTGTACAAGAACAGACGCGGCTGCGAGTTTTGTGCAGCAACTCTAAGCCTG-GGAAAAATACCTCCAGCC
TTCTTGCATTGAACTAGGATCAACTTTC----------------------------------------------TTGTGC
CAAACCTTCAAAGTATCTACTGTCTGCTCTACCCATT--TTTTTTACCAACAACTGTTCTGT--C--TTGTACAGTACTT
ATGTCTGCACATGGAGTCATCTACAGCTGATGCCGGTGACAAGCATCTGGGGAGCTACCTGACATTGGGTTTGACAGTAT
CGCAGTCAAAGAAAGGGGATACTAAGTTTCCAAAGGTCCTGTCGCTTCTTGCCACATATCTGGGCAGATCAGTTCAGAAG
AATGAAGAATTACTAGGTTCTAATGGAATAAAGGAGTCGACCACCATCTTTCATGGCCAGAAGGTGCCAGATCTCAGTAT
ACAGCTCTATGCAGAGCGCATT-TTCAAATATGCCGAGTGCAGTCCATCCTG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTTTGTGTTGGCACTTGTCTACATGGAGAGATATCTACAGCAGC------------------
--------------------------------------------------------CAAATGTGTACATGACGCCCTTCA
GTGTTCATCGCTTGCTGATTACAAGTGTGGTGGTTGCTGCCAAATTCACAGATGATGCGTA------AGTGTAC----CC
AATGCAACTGCAATTCAGCTGTATTTTG-----TG-----TATATCACAAACATGTACAGGTTTCCCAGAAACTTTCTCA
AAATCTCAA-------TGCATCTCCTGCAGGTTTTTCAACAATGCATTCTATGC----TAGGGTGGGAGGAATCAGCACA
ATTGAGATGAATCGTCTCGAGCTGGATTTGTTGTTTAATCTGGACTTCAGGCTTAAAGTGAACCTAGAGACA--TTCGGG
AGCTACTGCTTGCAGCTGGAGAAACATGCACCTGTGTCACCAGAGAGACTGCCGGTTCAGGTTCATTGTGTCAGTGTCAA
AGGATCTAAAGATTTGAGCTATAGCAGCAGTGCTAGCGCCGACGAGTTTTGCCAGAGCAAGCTTGTTCGCCAAAGCTACA
GCAGTCAGGCTCTCCAAGGATGCAGCTGACCAATCTATTTATGGCCTAAAGTTTTGCAAAGCACGTGACCTGATTACTGA
TAATTCTTTTAGATCTGACATTTGTGGATTCAGATTGCATTAAGTTGTTCTGGGGGTGTTTGATTAGTAGGGCTTTGATT
CTACTCCCTCTGTAAAGTAGATGATCTAAACGATCTTATATTTCTTTACAGAGGGAGTATTTTACTTCTGTAACACTGTA
ATTCTTGCAAACCACTTTGTTTAAAATGTTCACAATCGAGTTGGGAAACAACAGGTCTGAACATTGTTCATGTCCTGTGA
TATCCAATGCCGC--------------------------------------GGTTTAACCGGTTCTGTTGCCAAGTAGCC
TGTCGGCAAAGATGAATCAAGGTTTTCCAAGATCTGTGAATGGAC--TGTTCATTCTCCATGCATCTTCTGATTCTGTTT
GAGTCGCATAACAGGATCTGTGATGATTCCCACCGGCATTGTTGCAACAAGGAATTTATAAAACGAATTACTTTCCTGAA
CACAAGACCATGACTACGAGAGACATTGCCAAAGCATGAAAACAGAGCCAACGCCTCAGATGCACATTCGACTCAGAATA
TTTGAGTGGTGCAGCATATAATTCGAAACAGATGCTATGAAAAGGCTGGACCCACCTGCAGCTTCAACACCCCC----AC
GCTACTCTAGTTTTGTTATCTGTA----AGTAACATGAGCAAATTAGTTTTATGAGGGGA-AGAGACCATCCAGACTGGT
ATTTTTCTGTCTGATACTCAGCTTTAAATTTCTGTACGTGTTCTCTGGGCAGTCCTCAAACGTTATCCCTTAATTAGACT
AGTAGAGTAGATATCTGGGCAGTCGTAAAGAAATCCACAATTCTAGTCATGAGCGGATTGTAAAATTAACTACTCCCTCC
GATCCATATTAATCGAGAGAGGGGATTGTACTACAATTTAGGTGCAAGGAAAGGAGAATTCATATTCCTATG-TTTTTCC
TCCACTTGTCCTATGAATCAAAGAACAACTTGTCACCAGAATACAAAGATAAAACAATACT-------------------
------ACAAATAATGTGATAGTAGTACACATGTATATTTATTACTATTCATTATTCAGGAGAAAG
>chr1A_20
-------------------CTCCCTCCCGTGCGGGTTGTTGGCTGGTACTCCTAGATCTCAAGTTGCACAGC--ATAATG
CTATCCTACCTACCTGCGTACTATCTCCT-TGCGGCATTTGGGTCTACTAGATGGGATTCCCACCCAATCTGCTGTGCCT
TTCTTGTG-------CTCATCTCTTTCGAGCGAGCTAGGGTTGG--TCCCGAAGGAGCGCAGGAGGGTCGGGGAGGCGGA
AATCTGCATGCCCGCGTGGTCCGATGGGGCGGTGTGCCGGCTACTTTGGGCGGGGGCAGTGGATTTGGGTGCGGCTGCAT
CAGGAAGGAGTGTTTCTTGCCACCTCTTTTATGGTTGTTTATCCCCTCCTTTTGGTTGAGGGTTTAGGATTTCCCTTTAT
AAATCAGGCGAAATAC-----------------------------TACCAGAAATAGAAGAGGAATAACCCTCTGGGTGG
CCCAAAAGGGAGCAACACCCAGCTACTACTTTGTTTGTTGCCTATCTTCATCTTCTGA-------------------AAG
GGAAACGGGAATGAACTAGATTCATGCTGATGCTTGT-------------------------------------------
---------------TAAATTCTTGTGTGTGTGTGTGTTTTGGTGCATTCCTTGCCAAGAC--GGAAACTGTATTC-CGA
TTAGTATGCTGCGCGATGAGCGAGCTAAATTTAAAGTTCAGTGTGGAGGTACCAAACAACGG------AATCGTGGCTCG
GCTCCGCATTTTATACGCAGATCGACGCAGCTATGAGTTT--GTGCAATGCTGTTACAGCCTGGGAAAATACCTCCAG--
-------ATTGAACTAGGATCAACTTTC----------------------------------------------TTTTGC
CCAACCTTCAAAGTATCTACTATCTGCTGTGCCCATTTATTTTTCACTAACAACTGCTTTAT--CTTTTATACAGTACTT
ATGTCTGCCCATGGAGTCATCTAAAATTGATGCCAGTGACAAGCATCTGGAGAGCTACCTGACATTGGGTTTGACAGTAT
CACAGTCAAAGAAAGGAAGTACCAAGTTTCCTAAGGTCCTGTCGCTTCTTGCCACATATCTGGGCCGATCAGTTCAGAAG
AATGAAGAATTACTGGGTTCTAATGGAATAAAGGAGTCGACCACTATTTTTCATGGCCAGAAGGTGCCAGATCTCAGTAT
ACAGCTCTATGCAGAACGCATT-TTCAAATATGCCGAGTGCAGTCCATCTTG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTTTGTGTTGGCACTTGTCTACATGGAGAGATATCTACAGCAGC------------------
--------------------------------------------------------CAAATGTGTACATGACGCTCTTCA
GCGTTCATCGCTTGCTAATTACAAGTGTGGTGGTTGCTGCCAAATTCACAGATGATGCGTA------AGTGTAC----CC
AATGCAACTGCAATTCAGCTGTATTTCTTTCTTTG-----TATATCACAAACATGCACAGGTTTCCCAGTAACTTTCT--
------CAA-------TGCATGTCGTGCAGGTTTTTCAACAATGCATTCTATGC----CAGAGTGGGAGGAATCAGCACA
ATCGAGATGAATCGGCTTGAACTGGATTTGTTGTTTAATCTGGACTTCAGGCTGAAAGTGAACCTAGGGACA--TTCGGG
AGCTACTGCTTGCAGCTGGAGAAACATGCACCGGTGTCACCAGAGAGACTGCCTGTTCAGGTTCATTGTGTCAGTGTCAA
AGGATCTAAAGATTTGGGCTATAGCAGCAGTGGTAGCGCCGACGAATTTTGCCAGAGCAAGCTTGTTCGCCAAAGCTACA
GCAGTCAGGCTCTCCAAGGATGCAGCTGACCAATCTATTTATGGCCTAAAGTTTTGCAAAGCATGTGACCTGATTACTGA
TAATTCTTTTAGATCTGACATTTGA-----------GCATTAAGTTGTTCTGGGGGTGTTTGATTAGTAGGGATTCAATT
ATG--------------------------------------------------------TTTTACTTCTGTAACACTGTA
ATTCTTGCAACCCACTTTGTTTAAAATGTTCACAATCTAGTTGGGAAACAACCGGCCTGAACATTACTCA-GTCCTGTGA
TATCCAATGCCGTGGTTTAACTGGATCTATTATTTATTTATTTTAAGAAAAGGTTTAACCTGATCTGTTGCCAAGTAACC
TGTTGGCAA-GATGAATCTGGCTTTTCCAAGATCTGCGAATGGCC--TGCTTC--CTCTGTGCTTCTTATGATTCTGTTT
CAGTCGCATAACAGGATCTGTGATGATTTACACTGGCATTGTTGCAACAAGGAATTTATAAAACGAATTACTTTCCTGAA
CACGAGACTATGACTATGAGTGACATCGCCAAAGCATGAAAACAGAGC---------AGATGCACATTCGAGTCAGAATA
TTTGAGTGATGTAGCGTA-----------------------------------ACCTGCAGCGTCAACACCCCTACGGAC
GCTACTCTAGTTTTGTTATCTGTATATAAGTAACATAAGC-AATTAGTTTTATGAGGGGGGAGAAACCATCCATACTGGT
GTTTCTCTGTCTGATATTCAGCTTTAAATTTCTGCATGTGTTATCTGGGCAGTCCTCAAACGTTATCCCTTAATTAGACT
ACCAGAGTTGATATCTGGGCAGTCGTAAAGAAAGCCACAATTCTAGTCACAAGGGGATTGTAAAATTA--TACTCCCTCC
AATCCATATTAATCGAGAGGGGAC--TGTACTACAATTTCAGTGCAAGGAAAGGAAAATTCATATTCCTACGATTTTTCC
TCCACTTCTCCTATGAATCAAAGAAGAACTTGTCACCAGAGTAGAAAGATAAGACAATACAAATAATGTGATAGAATTTG
CTCAAAACAAATAACGTGATAGTAGTACACATGCATATTTATTACTATTCATTATGCAGGAGAAAG
>chr1A_998
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-------CCTATGGGGTCATCTACAACTGATGCTAGTGATAAGCATTTGGAGAGCTACCTGACATGGGGTTTGACAGTAT
CATAATCAAAGAAAGGACATACCAAGTTTCCAAAGGTGCTGTCACTTCTTGCAACGTATCTTGGCAGGTCGATTCAGAAA
AATAAAAAAGTACTAGGTTCTAATGTCAG-----------------------------------------------GTAT
ACAGTTCTATGCAGAACGTATT-TTCAAGTATGCTGAGTGTAGGCCATCTTG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CCTTGTGTTGGCACTAGTGTACATGGAGATATAGCTA--GCAAC------------------
--------------------------------------------------------CAGATGTGCACATGACGCCCTTTA
GTGTTCACCGCTTGCTAATTACAGGTGTGGTGGTTGCTGCCAGATTCACTGATGATGCGTA------AGTACCCACTGGC
ACAGCAACTGCAAT-----TGTTTTATC------G-----TATATCACAAACATGCACAGGTTTTCCAGTAATA------
------------------CATGTGTTGCAGGTTTTCCAACAGTGCATTCTAACATGCATAGGGTGGGAGGAATCAGTGCA
TTGGATATGAATCAGCCTGAGTTGGATTTGCTGTTTAATCTGGACTTCAGGCTGAAAGTGAACCTGGAGACA--TTTGGG
AGCTGCTGCTTGCAGCTGGAGAAACATGCAGCGGTTTCACTAGAGAT--TGCCGGTTCAGGTTCATTGT-TCA------A
TGGATGAAAAGATTCAAGCTATAGT------GGTAGTGCCAGTGAGTTTTGCTAGAGCAAGCT-----------------
------------------------------------ATGTAGGGCCTACAG-----------------------------
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>chr1A_1007
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----------------TCATCTACAACTAATGCTGGTGATGAGCATTTGGAGAGCTACCGGACATTGGGTTTGACAGTAT
CGCGGTCAAAGAAAGGGGATACGAAGTTTCCAAAGGTCTTGTCGCTTCTTGCCACATATCTGGGCAGATCAGTTCAGAAG
AGTGAAGAATTACTAGGTTCTGATGGAATAAAGGAGTCGTCCACTATCTTTCATGGCCAGAGGGTGCCAGATCCCAGTAT
ACAGCTCTATGCAGAACGCATTTTTCAAGTATGCTGAGTGCAGTCCATCCTG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTTTGTGTTGGCACTTGTCTACATGGTGAGACATCTACATCAGC------------------
--------------------------------------------------------CAAATGTGTACATGACGCCCTTCA
GTGTTCATCGCTTACTAATTACAAGTGTGGTGGTTGATGCCAAATTCACAGATGATGCGTAGTGTGTAGTGTAC----CC
AATGCAGCCGCAATTCCGTTGTATTT----CTTTGCATATCATATCACAAACATGCACAGGTTTCCCAGTAACTTTCT--
------CAAATCTCAATGCATCTCCTGCAGGTTTTTCAACAACGCATTATATGC----TAGGGTGGGAGGAATCAACACA
ATCGAGATGAATCGTCTCGAGCTGGATTTGTTGTTTAATCTGGACTTCGGGTTGAAAGTGAACCTAGAGACT--TTTGGG
AGCTACTACTTGCAACTGGAGAAACATGCACCGGTGTCACCAGAGAGACTGCCGGTT-----------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr3A_1007
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----------------TCATCTACAATTGATGCCGGTGATAAGCATTTGGAGAGCTACTGGACATTGGGTTTAACAGTAT
CACAGTCAAAGAAAGGGGATACCAAGTTTCCAAATGTCCTGTCGCTTCTTGCCACATATCTGAGCAGATCAGTTCAGAAG
AATGAAGAATTACTAGGTTCTGATGGAATGAAGGAGTCGTCCACTATCTTTCATGGCCAGAGGGTGACAGATCTCAGTAT
ACAGCTCTATGCAGAACGCATT-TTCAAGTATGCTGAGTGCAGTCACTAGTAGAAAACGGGCCTATTGTCCCGGTTCGTA
AGGATCTTTTGTCCTGGTTCCTGAACCGGGACTAAAGGGTCGTTACTAATGCCCTGACCCTTTAGTCCCGGTTCTAACCA
GAACCGGGACAGATGGGTCTCCACGTGGCCTGCGCGCTGAGCCCAGGCAGGAGGGCCTTTGGTCCCGGTTGGTGGCACCA
ACCGGGACCAATAGGCATCCACGCGTCAGCATTTCTGTGGCTGGGGTTTTTATTTTTTTTGAAAGCGGGGGGGTTTGGGG
GTTAATTTAGGTATTTCATATATTGTGTCACAAACATGACGCCCTTCAGTGTACGTCAAATGTGTACATGACGCCCTTCA
GTGTTCATCGCTTGCTAATTACAAGTGTGGCGGTTGCTGCCAAATTCACAGATGATGCGTA------AGTGTAC----TC
AATGCAGCCGCAATTCAGCTGTATTT----CTTTG-----CATATCACAAACATGCACTGGTTTCCCACTAACTTTCT--
------CAAATCTCAATGCATCTCCTGCAGGTTTTTCAACAATACATTCTATGC----TAGGGTGGGAGGAATCAACACA
ATCGAGATGAATCGTCTCGAGCTGCATTTGTTGTTTAATCTGGACTTCAGGCTGAAAGTGAACCTAGAGACTTTTTTGGG
AGCTACTGCTTGCAACTGGAGAAACATGCACCGGTGTCACCAGAGAGACTGTCGGTTCAGGTTCATTGTGTCA------A
ATGATCTAAAGATTTGAGCTATAGC-------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1D_1224
TCAGGT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AT
ACAGCTCTATGCAGAACGCATT-TTCAAGTACGCCGAGTGCGGGCCATCTTG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTTTGTGTTGGCACTTGTCTACATGGAGAGATAGCTA--GCAAG------------------
--------------------------------------------------------CAAATGTGCACATGATGCTCTTTA
GTGTTCATCGCTTGCTAATTACAGGTGTGGTG-TTGCTGCCAAATTCATTGATGATGCGTA------AGTACCCACTGCC
ACAGCAACTGCAAT-----TGTATTATC-----TT-----TATATCACAAACATGCACAGGTTTCCCAGTAATA------
------------------CATGTGTTGCAGGTTTTTCAACAGTGCATTCTAACATGCATAGGGTGGGAGGAATCAGTGCA
TGCGAGATGAATCGGCCTGAGTTGGATTTGCTGTTTAATCTGGACTTCAGGCTGAAAGTGAACCTGGAGTCA--TTTGGG
AGCTGCTGCTTGCAGCTGGAGAAACATGCAGCGCGTTCACC--AGAGACTGCCGGTTCAGGTTCATTGTGTCA------A
TGGATGAAAAGATTTGAGCTATAGC------GGTAGCGCCCATGAGTTTTGCTAGAGCAAGCT-----------------
------------------------------------ATGTA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>SNPs
----------------------------------------S-----------------------------S-SS------
---------------SS---SSS------------------------S-------------SS------------S--S-
----------SSSSS----------------------------SSS----------------------------------
-----------------------------SS---------S-----S--S--------S----------S----------
-----------------------------S-------------------------------------------------S
----------------SS-SS---------------------------------------------------S-------
------------------------S-S-SS---S-SS-SS---S--------------SSSSSSSSSSSSSSSSSSS--S
S-S---S-----S--SS----S----S-----SS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS--S-------S----S-S--SSSSSSSSSSS-SSSSS---------SS------------SS---
--SS------------------S-S-S----S----SS-S-----------S-SSSS--SSSSSSSSS-S--------S-
--------S--------------------------S----------------S---S-----------S--S--S-----
---S-SSSSSSSSSSS-SSSSSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-
--S-------SSS-S--------S-S------SS-SSSSS--S--SS-S-SS-SSS-S--SSSS-----S-----S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S---------------S-SS----------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
------SS--S-----------------------------------S---------------------------------
---------------------------------------------------S----------------------S-----
--------------------------------S--------------------------------------S--------
------------------------------------------------------------------S-------------
--------------------------S---S-------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------S-------------------------S---------------------------
-----------------------------------------------------------S-------S------------
--------------------------------------------------S----------S------------------
--------------------------------------------------------S----------S------------
---------------------------------------------SS-----S----------------------S----
-----------------S-----------S---------------S--S-------------------------------
-----------S--S-----S---------S---------------S-----S----S------S----S----------
-------------------S----------------------S-S-----S-----S-----------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
-------------------------S------------------------------------------------------
-----------------------S------------------------------------------------S---S---
-------S-------S----------------------------------------------------------------
------------------------------------------------------------------
>forward_932
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--------------------------------TTTCTGCGTGGTTGACTGGT----------------------------
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>reverse_2767
--------------------------------------------------------------------------------
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----------------------------------------------ACCAACACCTCGGATGCAAA--------------
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------------------------------------------------------------------
