Multiple sequence alignment - TraesCS1D01G189700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G189700 chr1D 100.000 2478 0 0 450 2927 262016105 262018582 0.000000e+00 4577.0
1 TraesCS1D01G189700 chr1D 100.000 260 0 0 1 260 262015656 262015915 5.670000e-132 481.0
2 TraesCS1D01G189700 chr1A 88.962 1359 98 22 638 1966 337777436 337776100 0.000000e+00 1631.0
3 TraesCS1D01G189700 chr1A 86.292 766 62 18 606 1338 337812737 337811982 0.000000e+00 793.0
4 TraesCS1D01G189700 chr1A 86.438 730 63 14 638 1338 337782183 337781461 0.000000e+00 767.0
5 TraesCS1D01G189700 chr1A 85.479 730 70 15 638 1338 337807960 337807238 0.000000e+00 728.0
6 TraesCS1D01G189700 chr1A 76.341 317 65 9 1147 1458 337301739 337301428 8.390000e-36 161.0
7 TraesCS1D01G189700 chr1A 90.411 73 5 2 490 561 337813434 337813363 8.640000e-16 95.3
8 TraesCS1D01G189700 chr1B 88.959 1105 55 20 606 1672 349741493 349740418 0.000000e+00 1303.0
9 TraesCS1D01G189700 chr1B 95.817 263 11 0 1668 1930 349726142 349725880 2.700000e-115 425.0
10 TraesCS1D01G189700 chr1B 88.953 172 15 4 1 170 349742665 349742496 2.960000e-50 209.0
11 TraesCS1D01G189700 chr1B 90.260 154 14 1 2738 2890 253045784 253045937 1.780000e-47 200.0
12 TraesCS1D01G189700 chr5A 82.979 658 96 13 1995 2644 205008451 205009100 5.440000e-162 580.0
13 TraesCS1D01G189700 chrUn 82.827 658 102 8 1995 2644 67798450 67799104 1.960000e-161 579.0
14 TraesCS1D01G189700 chr3A 82.508 646 100 11 2004 2642 21010041 21009402 3.300000e-154 555.0
15 TraesCS1D01G189700 chr3A 90.000 150 14 1 2742 2890 382371546 382371695 2.980000e-45 193.0
16 TraesCS1D01G189700 chr5B 86.248 509 62 5 2097 2605 658884001 658883501 1.980000e-151 545.0
17 TraesCS1D01G189700 chr5B 86.051 509 63 5 2097 2605 658797289 658796789 9.230000e-150 540.0
18 TraesCS1D01G189700 chr5B 86.051 509 63 5 2097 2605 658832423 658831923 9.230000e-150 540.0
19 TraesCS1D01G189700 chr6A 81.487 659 107 11 1995 2644 431199522 431200174 7.180000e-146 527.0
20 TraesCS1D01G189700 chr6A 100.000 104 0 0 2738 2841 457093370 457093473 2.980000e-45 193.0
21 TraesCS1D01G189700 chr7B 81.591 641 107 8 2010 2646 665703711 665704344 1.200000e-143 520.0
22 TraesCS1D01G189700 chr3D 80.645 651 112 12 2000 2644 18817671 18817029 2.620000e-135 492.0
23 TraesCS1D01G189700 chr3D 100.000 29 0 0 450 478 581576997 581577025 1.000000e-03 54.7
24 TraesCS1D01G189700 chr7D 85.465 344 38 7 1132 1465 22624675 22624334 6.000000e-92 348.0
25 TraesCS1D01G189700 chr4A 100.000 149 0 0 2742 2890 606646827 606646679 2.870000e-70 276.0
26 TraesCS1D01G189700 chr4A 83.186 113 16 3 66 176 36399171 36399060 1.860000e-17 100.0
27 TraesCS1D01G189700 chr2A 98.701 154 2 0 2742 2895 44242216 44242063 1.030000e-69 274.0
28 TraesCS1D01G189700 chr4D 90.385 156 14 1 2736 2890 484618999 484619154 1.380000e-48 204.0
29 TraesCS1D01G189700 chr4B 90.789 152 13 1 2741 2891 291859871 291860022 4.950000e-48 202.0
30 TraesCS1D01G189700 chr4B 90.476 147 13 1 2742 2887 406552626 406552772 2.980000e-45 193.0
31 TraesCS1D01G189700 chr7A 84.426 122 8 1 2768 2889 608325519 608325629 3.080000e-20 110.0
32 TraesCS1D01G189700 chr3B 89.552 67 6 1 2577 2643 482492634 482492569 1.870000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G189700 chr1D 262015656 262018582 2926 False 2529.00 4577 100.0000 1 2927 2 chr1D.!!$F1 2926
1 TraesCS1D01G189700 chr1A 337776100 337777436 1336 True 1631.00 1631 88.9620 638 1966 1 chr1A.!!$R2 1328
2 TraesCS1D01G189700 chr1A 337781461 337782183 722 True 767.00 767 86.4380 638 1338 1 chr1A.!!$R3 700
3 TraesCS1D01G189700 chr1A 337807238 337807960 722 True 728.00 728 85.4790 638 1338 1 chr1A.!!$R4 700
4 TraesCS1D01G189700 chr1A 337811982 337813434 1452 True 444.15 793 88.3515 490 1338 2 chr1A.!!$R5 848
5 TraesCS1D01G189700 chr1B 349740418 349742665 2247 True 756.00 1303 88.9560 1 1672 2 chr1B.!!$R2 1671
6 TraesCS1D01G189700 chr5A 205008451 205009100 649 False 580.00 580 82.9790 1995 2644 1 chr5A.!!$F1 649
7 TraesCS1D01G189700 chrUn 67798450 67799104 654 False 579.00 579 82.8270 1995 2644 1 chrUn.!!$F1 649
8 TraesCS1D01G189700 chr3A 21009402 21010041 639 True 555.00 555 82.5080 2004 2642 1 chr3A.!!$R1 638
9 TraesCS1D01G189700 chr5B 658883501 658884001 500 True 545.00 545 86.2480 2097 2605 1 chr5B.!!$R3 508
10 TraesCS1D01G189700 chr5B 658796789 658797289 500 True 540.00 540 86.0510 2097 2605 1 chr5B.!!$R1 508
11 TraesCS1D01G189700 chr5B 658831923 658832423 500 True 540.00 540 86.0510 2097 2605 1 chr5B.!!$R2 508
12 TraesCS1D01G189700 chr6A 431199522 431200174 652 False 527.00 527 81.4870 1995 2644 1 chr6A.!!$F1 649
13 TraesCS1D01G189700 chr7B 665703711 665704344 633 False 520.00 520 81.5910 2010 2646 1 chr7B.!!$F1 636
14 TraesCS1D01G189700 chr3D 18817029 18817671 642 True 492.00 492 80.6450 2000 2644 1 chr3D.!!$R1 644

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
181 182 0.036483 TGGCTCAATACTTGCAGCGA 60.036 50.0 0.0 0.0 35.83 4.93 F
209 210 0.038526 CAACGAACTCCTACAGGCGT 60.039 55.0 0.0 0.0 38.45 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1909 2873 0.243636 AATTAGTTTGCTGTGGCGGC 59.756 50.000 0.0 0.0 42.25 6.53 R
2079 3044 2.167693 TGGCTAACGGACAATCGAGAAT 59.832 45.455 0.0 0.0 0.00 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 2.669229 TGCTCGTGTGCACCCATG 60.669 61.111 15.69 1.89 38.12 3.66
46 47 1.909781 CACCCATGTGCTTGCCCTT 60.910 57.895 0.00 0.00 35.31 3.95
48 49 2.263540 CCATGTGCTTGCCCTTGC 59.736 61.111 0.00 0.00 38.26 4.01
65 66 2.309528 TGCTTGTGTCCGTCCATATC 57.690 50.000 0.00 0.00 0.00 1.63
81 82 3.449018 CCATATCTATGACCCCTCTTCGG 59.551 52.174 0.00 0.00 35.75 4.30
82 83 2.777459 ATCTATGACCCCTCTTCGGT 57.223 50.000 0.00 0.00 35.88 4.69
88 89 2.045926 CCCCTCTTCGGTTGGCTG 60.046 66.667 0.00 0.00 0.00 4.85
103 104 0.399233 GGCTGGGTGGAGGTAGATCT 60.399 60.000 0.00 0.00 0.00 2.75
116 117 0.981183 TAGATCTTGTGGCGTTGGGT 59.019 50.000 0.00 0.00 0.00 4.51
117 118 0.981183 AGATCTTGTGGCGTTGGGTA 59.019 50.000 0.00 0.00 0.00 3.69
127 128 1.227263 CGTTGGGTAGATGGCCTCG 60.227 63.158 3.32 0.00 0.00 4.63
129 130 0.462047 GTTGGGTAGATGGCCTCGTG 60.462 60.000 3.32 0.00 0.00 4.35
163 164 2.877786 TGTGTACTCATGCAAGTGGTTG 59.122 45.455 1.14 0.00 36.67 3.77
165 166 1.200020 GTACTCATGCAAGTGGTTGGC 59.800 52.381 1.14 0.00 33.87 4.52
166 167 0.178981 ACTCATGCAAGTGGTTGGCT 60.179 50.000 0.00 0.00 33.87 4.75
167 168 0.524862 CTCATGCAAGTGGTTGGCTC 59.475 55.000 0.00 0.00 33.87 4.70
168 169 0.178995 TCATGCAAGTGGTTGGCTCA 60.179 50.000 0.00 0.00 33.87 4.26
169 170 0.675083 CATGCAAGTGGTTGGCTCAA 59.325 50.000 0.00 0.00 33.87 3.02
170 171 1.274167 CATGCAAGTGGTTGGCTCAAT 59.726 47.619 0.00 0.00 33.87 2.57
171 172 2.284754 TGCAAGTGGTTGGCTCAATA 57.715 45.000 0.00 0.00 33.87 1.90
172 173 1.885887 TGCAAGTGGTTGGCTCAATAC 59.114 47.619 0.00 0.00 33.87 1.89
173 174 2.162681 GCAAGTGGTTGGCTCAATACT 58.837 47.619 0.00 0.00 33.87 2.12
174 175 2.558359 GCAAGTGGTTGGCTCAATACTT 59.442 45.455 11.26 11.26 35.57 2.24
175 176 3.612479 GCAAGTGGTTGGCTCAATACTTG 60.612 47.826 24.10 24.10 44.43 3.16
176 177 2.162681 AGTGGTTGGCTCAATACTTGC 58.837 47.619 0.00 0.00 0.00 4.01
177 178 1.885887 GTGGTTGGCTCAATACTTGCA 59.114 47.619 0.00 0.00 0.00 4.08
178 179 2.095059 GTGGTTGGCTCAATACTTGCAG 60.095 50.000 0.00 0.00 0.00 4.41
179 180 1.135286 GGTTGGCTCAATACTTGCAGC 60.135 52.381 0.00 0.00 34.92 5.25
180 181 0.804364 TTGGCTCAATACTTGCAGCG 59.196 50.000 0.00 0.00 35.83 5.18
181 182 0.036483 TGGCTCAATACTTGCAGCGA 60.036 50.000 0.00 0.00 35.83 4.93
182 183 1.303309 GGCTCAATACTTGCAGCGAT 58.697 50.000 0.00 0.00 35.83 4.58
183 184 1.003116 GGCTCAATACTTGCAGCGATG 60.003 52.381 0.00 0.00 35.83 3.84
184 185 1.596464 GCTCAATACTTGCAGCGATGC 60.596 52.381 20.73 20.73 0.00 3.91
185 186 1.938577 CTCAATACTTGCAGCGATGCT 59.061 47.619 27.55 9.35 40.77 3.79
186 187 3.126073 CTCAATACTTGCAGCGATGCTA 58.874 45.455 27.55 18.86 36.40 3.49
187 188 2.866156 TCAATACTTGCAGCGATGCTAC 59.134 45.455 27.55 0.00 36.40 3.58
188 189 2.602257 ATACTTGCAGCGATGCTACA 57.398 45.000 27.55 9.82 36.40 2.74
189 190 2.602257 TACTTGCAGCGATGCTACAT 57.398 45.000 27.55 11.96 36.40 2.29
190 191 1.293924 ACTTGCAGCGATGCTACATC 58.706 50.000 27.55 0.00 36.40 3.06
191 192 1.292992 CTTGCAGCGATGCTACATCA 58.707 50.000 27.55 1.34 36.40 3.07
192 193 1.667212 CTTGCAGCGATGCTACATCAA 59.333 47.619 27.55 10.42 36.40 2.57
193 194 1.009078 TGCAGCGATGCTACATCAAC 58.991 50.000 27.55 0.00 36.40 3.18
194 195 0.042708 GCAGCGATGCTACATCAACG 60.043 55.000 20.22 0.00 36.40 4.10
195 196 1.559831 CAGCGATGCTACATCAACGA 58.440 50.000 8.21 0.00 36.40 3.85
196 197 1.926510 CAGCGATGCTACATCAACGAA 59.073 47.619 8.21 0.00 36.40 3.85
197 198 1.927174 AGCGATGCTACATCAACGAAC 59.073 47.619 8.21 0.00 36.99 3.95
198 199 1.927174 GCGATGCTACATCAACGAACT 59.073 47.619 8.21 0.00 34.76 3.01
199 200 2.034507 GCGATGCTACATCAACGAACTC 60.035 50.000 8.21 0.00 34.76 3.01
200 201 2.535984 CGATGCTACATCAACGAACTCC 59.464 50.000 8.21 0.00 34.76 3.85
201 202 3.735208 CGATGCTACATCAACGAACTCCT 60.735 47.826 8.21 0.00 34.76 3.69
202 203 4.497507 CGATGCTACATCAACGAACTCCTA 60.498 45.833 8.21 0.00 34.76 2.94
203 204 4.106029 TGCTACATCAACGAACTCCTAC 57.894 45.455 0.00 0.00 0.00 3.18
204 205 3.508402 TGCTACATCAACGAACTCCTACA 59.492 43.478 0.00 0.00 0.00 2.74
205 206 4.106197 GCTACATCAACGAACTCCTACAG 58.894 47.826 0.00 0.00 0.00 2.74
206 207 3.594603 ACATCAACGAACTCCTACAGG 57.405 47.619 0.00 0.00 0.00 4.00
207 208 2.271800 CATCAACGAACTCCTACAGGC 58.728 52.381 0.00 0.00 34.44 4.85
208 209 0.242825 TCAACGAACTCCTACAGGCG 59.757 55.000 0.00 0.00 34.44 5.52
209 210 0.038526 CAACGAACTCCTACAGGCGT 60.039 55.000 0.00 0.00 38.45 5.68
210 211 0.677842 AACGAACTCCTACAGGCGTT 59.322 50.000 3.32 3.32 44.96 4.84
211 212 0.677842 ACGAACTCCTACAGGCGTTT 59.322 50.000 5.18 0.00 42.61 3.60
212 213 1.069668 ACGAACTCCTACAGGCGTTTT 59.930 47.619 5.18 0.00 42.61 2.43
213 214 2.297033 ACGAACTCCTACAGGCGTTTTA 59.703 45.455 5.18 0.00 42.61 1.52
214 215 2.665052 CGAACTCCTACAGGCGTTTTAC 59.335 50.000 5.18 0.00 42.61 2.01
215 216 3.656559 GAACTCCTACAGGCGTTTTACA 58.343 45.455 5.18 0.00 42.61 2.41
216 217 3.314541 ACTCCTACAGGCGTTTTACAG 57.685 47.619 0.00 0.00 34.44 2.74
217 218 2.028385 ACTCCTACAGGCGTTTTACAGG 60.028 50.000 0.00 0.00 34.44 4.00
218 219 1.276989 TCCTACAGGCGTTTTACAGGG 59.723 52.381 0.00 0.00 34.44 4.45
219 220 1.002773 CCTACAGGCGTTTTACAGGGT 59.997 52.381 0.00 0.00 0.00 4.34
220 221 2.073816 CTACAGGCGTTTTACAGGGTG 58.926 52.381 0.00 0.00 0.00 4.61
221 222 0.470766 ACAGGCGTTTTACAGGGTGA 59.529 50.000 0.00 0.00 0.00 4.02
222 223 1.134037 ACAGGCGTTTTACAGGGTGAA 60.134 47.619 0.00 0.00 0.00 3.18
223 224 2.159382 CAGGCGTTTTACAGGGTGAAT 58.841 47.619 0.00 0.00 0.00 2.57
224 225 2.556622 CAGGCGTTTTACAGGGTGAATT 59.443 45.455 0.00 0.00 0.00 2.17
225 226 3.005367 CAGGCGTTTTACAGGGTGAATTT 59.995 43.478 0.00 0.00 0.00 1.82
226 227 3.005367 AGGCGTTTTACAGGGTGAATTTG 59.995 43.478 0.00 0.00 0.00 2.32
227 228 3.004944 GGCGTTTTACAGGGTGAATTTGA 59.995 43.478 0.00 0.00 0.00 2.69
228 229 4.226761 GCGTTTTACAGGGTGAATTTGAG 58.773 43.478 0.00 0.00 0.00 3.02
229 230 4.261447 GCGTTTTACAGGGTGAATTTGAGT 60.261 41.667 0.00 0.00 0.00 3.41
230 231 5.735070 GCGTTTTACAGGGTGAATTTGAGTT 60.735 40.000 0.00 0.00 0.00 3.01
231 232 5.685511 CGTTTTACAGGGTGAATTTGAGTTG 59.314 40.000 0.00 0.00 0.00 3.16
232 233 6.569780 GTTTTACAGGGTGAATTTGAGTTGT 58.430 36.000 0.00 0.00 0.00 3.32
233 234 6.385649 TTTACAGGGTGAATTTGAGTTGTC 57.614 37.500 0.00 0.00 0.00 3.18
234 235 3.897239 ACAGGGTGAATTTGAGTTGTCA 58.103 40.909 0.00 0.00 0.00 3.58
235 236 4.277476 ACAGGGTGAATTTGAGTTGTCAA 58.723 39.130 0.00 0.00 41.13 3.18
247 248 7.397892 TTTGAGTTGTCAAAGTGTTATTGGA 57.602 32.000 0.00 0.00 45.82 3.53
248 249 6.371809 TGAGTTGTCAAAGTGTTATTGGAC 57.628 37.500 0.00 0.00 0.00 4.02
249 250 5.883115 TGAGTTGTCAAAGTGTTATTGGACA 59.117 36.000 0.00 0.00 0.00 4.02
250 251 6.375736 TGAGTTGTCAAAGTGTTATTGGACAA 59.624 34.615 5.51 5.51 31.59 3.18
251 252 7.094162 TGAGTTGTCAAAGTGTTATTGGACAAA 60.094 33.333 10.20 0.00 33.69 2.83
252 253 7.257722 AGTTGTCAAAGTGTTATTGGACAAAG 58.742 34.615 10.20 0.00 33.69 2.77
253 254 5.587289 TGTCAAAGTGTTATTGGACAAAGC 58.413 37.500 0.00 0.00 0.00 3.51
254 255 4.675114 GTCAAAGTGTTATTGGACAAAGCG 59.325 41.667 0.00 0.00 0.00 4.68
255 256 4.576873 TCAAAGTGTTATTGGACAAAGCGA 59.423 37.500 0.00 0.00 0.00 4.93
256 257 4.749245 AAGTGTTATTGGACAAAGCGAG 57.251 40.909 0.00 0.00 0.00 5.03
257 258 3.074412 AGTGTTATTGGACAAAGCGAGG 58.926 45.455 0.00 0.00 0.00 4.63
258 259 2.161609 GTGTTATTGGACAAAGCGAGGG 59.838 50.000 0.00 0.00 0.00 4.30
259 260 1.743394 GTTATTGGACAAAGCGAGGGG 59.257 52.381 0.00 0.00 0.00 4.79
468 469 2.150397 ATTAAGCCCGTCGATGTAGC 57.850 50.000 3.52 6.34 0.00 3.58
469 470 0.818938 TTAAGCCCGTCGATGTAGCA 59.181 50.000 16.50 0.00 0.00 3.49
470 471 1.037493 TAAGCCCGTCGATGTAGCAT 58.963 50.000 16.50 9.08 0.00 3.79
471 472 0.178068 AAGCCCGTCGATGTAGCATT 59.822 50.000 16.50 7.39 0.00 3.56
472 473 0.178068 AGCCCGTCGATGTAGCATTT 59.822 50.000 16.50 0.00 0.00 2.32
473 474 1.014352 GCCCGTCGATGTAGCATTTT 58.986 50.000 10.99 0.00 0.00 1.82
474 475 1.400494 GCCCGTCGATGTAGCATTTTT 59.600 47.619 10.99 0.00 0.00 1.94
475 476 2.791158 GCCCGTCGATGTAGCATTTTTG 60.791 50.000 10.99 0.00 0.00 2.44
484 485 3.391965 TGTAGCATTTTTGCAAGGCTTG 58.608 40.909 22.75 22.75 36.10 4.01
488 489 1.264826 CATTTTTGCAAGGCTTGTGGC 59.735 47.619 26.71 14.43 40.90 5.01
498 499 1.078848 GCTTGTGGCTGATCCGTCT 60.079 57.895 0.00 0.00 37.80 4.18
520 521 5.764686 TCTCTATGATGTTTGTGTTGCAGTT 59.235 36.000 0.00 0.00 0.00 3.16
530 531 4.079980 TGTGTTGCAGTTGTAGTACCAT 57.920 40.909 0.00 0.00 0.00 3.55
565 1336 9.793252 CAATACTCAACTTTTCTCCCATTATTG 57.207 33.333 0.00 0.00 0.00 1.90
568 1339 8.250143 ACTCAACTTTTCTCCCATTATTGTTT 57.750 30.769 0.00 0.00 0.00 2.83
569 1340 8.704668 ACTCAACTTTTCTCCCATTATTGTTTT 58.295 29.630 0.00 0.00 0.00 2.43
571 1342 9.323985 TCAACTTTTCTCCCATTATTGTTTTTG 57.676 29.630 0.00 0.00 0.00 2.44
572 1343 9.108284 CAACTTTTCTCCCATTATTGTTTTTGT 57.892 29.630 0.00 0.00 0.00 2.83
574 1345 9.679661 ACTTTTCTCCCATTATTGTTTTTGTTT 57.320 25.926 0.00 0.00 0.00 2.83
601 1372 4.815108 GGGTGAACGCCCCATCCC 62.815 72.222 11.96 0.00 42.89 3.85
604 1375 1.379843 GTGAACGCCCCATCCCATT 60.380 57.895 0.00 0.00 0.00 3.16
623 1542 5.118510 CCCATTTATTGTTTTCAAGACGCAC 59.881 40.000 0.00 0.00 43.41 5.34
704 1624 3.308323 GCAAGATTCTCTTAGTCTTGGCG 59.692 47.826 14.07 0.00 45.51 5.69
718 1659 3.059120 GTCTTGGCGAAGTCCAAACTTAC 60.059 47.826 8.41 0.00 45.80 2.34
749 1690 1.273606 CATACTATGGCGTGGCTAGCT 59.726 52.381 15.72 0.00 34.52 3.32
763 1704 2.632377 GCTAGCTTTGCACCATACAGA 58.368 47.619 7.70 0.00 0.00 3.41
765 1706 2.566833 AGCTTTGCACCATACAGACA 57.433 45.000 0.00 0.00 0.00 3.41
766 1707 2.154462 AGCTTTGCACCATACAGACAC 58.846 47.619 0.00 0.00 0.00 3.67
768 1709 2.489329 GCTTTGCACCATACAGACACAT 59.511 45.455 0.00 0.00 0.00 3.21
783 1731 5.088739 CAGACACATAGGAACGATTTTTGC 58.911 41.667 0.00 0.00 0.00 3.68
794 1742 0.785979 GATTTTTGCGTGCAAGCTGG 59.214 50.000 24.81 0.00 37.24 4.85
829 1777 3.446873 TGAATGTGTGGCTGAAGTTTGTT 59.553 39.130 0.00 0.00 0.00 2.83
830 1778 4.081752 TGAATGTGTGGCTGAAGTTTGTTT 60.082 37.500 0.00 0.00 0.00 2.83
866 1814 2.380064 ACCTGTCCATGCCAAAGAAA 57.620 45.000 0.00 0.00 0.00 2.52
911 1860 6.419484 TCAGACTTGATTACTTGACCAAGA 57.581 37.500 15.84 0.00 40.79 3.02
932 1881 6.846325 AGACAGAAAAGTAAGTCGGAAAAG 57.154 37.500 0.00 0.00 36.18 2.27
942 1891 3.740631 AGTCGGAAAAGTAGACGGTTT 57.259 42.857 0.00 0.00 39.65 3.27
943 1892 4.063998 AGTCGGAAAAGTAGACGGTTTT 57.936 40.909 0.00 0.00 39.65 2.43
971 1920 6.263168 AGAATCAACCAAACAACTAGTCCTTG 59.737 38.462 0.00 0.25 0.00 3.61
983 1932 0.608640 AGTCCTTGGCACCGTTCTAG 59.391 55.000 0.00 0.00 0.00 2.43
985 1934 1.003839 CCTTGGCACCGTTCTAGCA 60.004 57.895 0.00 0.00 0.00 3.49
991 1940 1.634702 GCACCGTTCTAGCAGAAGAG 58.365 55.000 0.00 0.00 34.42 2.85
1006 1955 2.618241 AGAAGAGTCTCTGCTATGCTCG 59.382 50.000 8.80 0.00 28.16 5.03
1007 1956 2.051334 AGAGTCTCTGCTATGCTCGT 57.949 50.000 0.18 0.00 0.00 4.18
1008 1957 1.675483 AGAGTCTCTGCTATGCTCGTG 59.325 52.381 0.18 0.00 0.00 4.35
1009 1958 1.403679 GAGTCTCTGCTATGCTCGTGT 59.596 52.381 0.00 0.00 0.00 4.49
1010 1959 2.614520 GAGTCTCTGCTATGCTCGTGTA 59.385 50.000 0.00 0.00 0.00 2.90
1011 1960 3.218453 AGTCTCTGCTATGCTCGTGTAT 58.782 45.455 0.00 0.00 0.00 2.29
1012 1961 4.390264 AGTCTCTGCTATGCTCGTGTATA 58.610 43.478 0.00 0.00 0.00 1.47
1017 1969 4.578928 TCTGCTATGCTCGTGTATAACTCA 59.421 41.667 0.00 0.00 0.00 3.41
1030 1982 9.440773 TCGTGTATAACTCAATATATACCTCGT 57.559 33.333 0.00 0.00 35.20 4.18
1056 2008 3.248495 CTCCTCCGGAGTCTTAAAACC 57.752 52.381 29.25 0.00 44.25 3.27
1102 2055 2.205074 CGTGCAAAGTTCAGTCAGACT 58.795 47.619 0.00 0.00 0.00 3.24
1224 2177 0.622136 TCAGCATCAAGGGCATCAGT 59.378 50.000 0.00 0.00 0.00 3.41
1233 2186 3.704566 TCAAGGGCATCAGTTACGAGTAT 59.295 43.478 0.00 0.00 0.00 2.12
1235 2188 2.365617 AGGGCATCAGTTACGAGTATGG 59.634 50.000 0.00 0.00 0.00 2.74
1236 2189 2.548067 GGGCATCAGTTACGAGTATGGG 60.548 54.545 0.00 0.00 0.00 4.00
1368 2321 1.002684 CTACAGTACATCGACGAGGCC 60.003 57.143 9.79 0.00 0.00 5.19
1477 2441 0.815734 ATTGATCGTTCGACCCGTCT 59.184 50.000 0.00 0.00 0.00 4.18
1478 2442 0.599558 TTGATCGTTCGACCCGTCTT 59.400 50.000 0.00 0.00 0.00 3.01
1504 2468 2.929641 TGTGTGCTTTGAGATTGTGGA 58.070 42.857 0.00 0.00 0.00 4.02
1506 2470 1.872952 TGTGCTTTGAGATTGTGGACG 59.127 47.619 0.00 0.00 0.00 4.79
1509 2473 3.002791 TGCTTTGAGATTGTGGACGATC 58.997 45.455 0.00 0.00 37.09 3.69
1598 2562 1.554583 AAGACGGAGGGGGAGAAAGC 61.555 60.000 0.00 0.00 0.00 3.51
1631 2595 3.782244 GGCGACTGCTGCGTTGAG 61.782 66.667 13.51 0.41 42.25 3.02
1632 2596 3.782244 GCGACTGCTGCGTTGAGG 61.782 66.667 13.51 0.00 38.39 3.86
1680 2644 0.115152 CCAAGGGGAAGCCCTTCTTT 59.885 55.000 4.18 0.00 46.11 2.52
1683 2647 0.776080 AGGGGAAGCCCTTCTTTGGA 60.776 55.000 7.85 0.00 44.66 3.53
1693 2657 1.630244 CTTCTTTGGAGGCGACAGCG 61.630 60.000 0.00 0.00 46.35 5.18
1779 2743 2.747686 GTCAAGGCCTTCGACCCA 59.252 61.111 25.55 3.98 0.00 4.51
1839 2803 4.681978 GCTCTGGACGCGGTGGTT 62.682 66.667 12.47 0.00 0.00 3.67
1866 2830 2.357517 CCGGACGTGAGCAAGCTT 60.358 61.111 0.00 0.00 0.00 3.74
1894 2858 0.299895 CTTCATCACGATGCACGCTC 59.700 55.000 8.31 0.00 46.94 5.03
1895 2859 0.389687 TTCATCACGATGCACGCTCA 60.390 50.000 8.31 0.00 46.94 4.26
1897 2861 1.066908 TCATCACGATGCACGCTCATA 59.933 47.619 8.31 0.00 46.94 2.15
1908 2872 3.248029 GCTCATATTGCGGCCGAG 58.752 61.111 33.48 16.93 0.00 4.63
1909 2873 2.320587 GCTCATATTGCGGCCGAGG 61.321 63.158 33.48 10.11 0.00 4.63
1910 2874 2.280797 TCATATTGCGGCCGAGGC 60.281 61.111 33.48 12.57 41.06 4.70
1923 2887 4.043200 GAGGCCGCCACAGCAAAC 62.043 66.667 13.15 0.00 39.83 2.93
1924 2888 4.586235 AGGCCGCCACAGCAAACT 62.586 61.111 13.15 0.00 39.83 2.66
1925 2889 2.671619 GGCCGCCACAGCAAACTA 60.672 61.111 3.91 0.00 39.83 2.24
1926 2890 2.265182 GGCCGCCACAGCAAACTAA 61.265 57.895 3.91 0.00 39.83 2.24
1927 2891 1.595093 GGCCGCCACAGCAAACTAAT 61.595 55.000 3.91 0.00 39.83 1.73
1991 2955 6.945938 TGTTACCATTATTTATTGGACCCG 57.054 37.500 5.70 0.00 36.79 5.28
1992 2956 5.828859 TGTTACCATTATTTATTGGACCCGG 59.171 40.000 0.00 0.00 36.79 5.73
1993 2957 4.799715 ACCATTATTTATTGGACCCGGA 57.200 40.909 0.73 0.00 36.79 5.14
2002 2966 2.973983 TTGGACCCGGATAACCAAAA 57.026 45.000 0.73 0.00 39.07 2.44
2011 2975 7.363968 GGACCCGGATAACCAAAAATAATTTGA 60.364 37.037 0.73 0.00 35.59 2.69
2031 2995 2.614829 TAAAGCGAAGATGGGTAGGC 57.385 50.000 0.00 0.00 0.00 3.93
2039 3003 0.031716 AGATGGGTAGGCAGCTCTCA 60.032 55.000 0.00 0.00 0.00 3.27
2050 3014 3.005155 AGGCAGCTCTCAATGTTGTTTTC 59.995 43.478 0.00 0.00 0.00 2.29
2053 3017 2.030805 AGCTCTCAATGTTGTTTTCGCC 60.031 45.455 0.00 0.00 0.00 5.54
2055 3019 3.612479 GCTCTCAATGTTGTTTTCGCCAT 60.612 43.478 0.00 0.00 0.00 4.40
2079 3044 7.239763 TCAGATGAAACTATACAACACCTCA 57.760 36.000 0.00 0.00 0.00 3.86
2177 3142 7.825270 AGTATTAACACGTTATTTGGGACATGA 59.175 33.333 0.00 0.00 39.30 3.07
2185 3150 6.882140 ACGTTATTTGGGACATGACTAAATGA 59.118 34.615 18.83 12.27 39.30 2.57
2192 3157 4.878397 GGGACATGACTAAATGAAGTGGAG 59.122 45.833 0.00 0.00 0.00 3.86
2206 3171 3.627395 AGTGGAGTCAAATATTGCGGA 57.373 42.857 0.00 0.00 0.00 5.54
2220 3185 8.397906 CAAATATTGCGGAACATATTCGGATAT 58.602 33.333 0.00 0.00 37.34 1.63
2238 3203 5.277011 CGGATATGGATATGCGCACTATTTG 60.277 44.000 14.90 0.00 45.03 2.32
2317 3282 9.167311 CAACTTTTTGCAGGTTATCTATAGAGT 57.833 33.333 8.70 0.00 0.00 3.24
2360 3325 3.429547 GGTCGTTACTCACTCATGCAGAT 60.430 47.826 0.00 0.00 0.00 2.90
2362 3327 4.627467 GTCGTTACTCACTCATGCAGATTT 59.373 41.667 0.00 0.00 0.00 2.17
2365 3330 5.445142 CGTTACTCACTCATGCAGATTTCAC 60.445 44.000 0.00 0.00 0.00 3.18
2374 3339 1.806542 TGCAGATTTCACGGAGCTTTC 59.193 47.619 0.00 0.00 0.00 2.62
2383 3348 0.669625 ACGGAGCTTTCGGTTACTGC 60.670 55.000 13.55 0.00 0.00 4.40
2420 3385 3.050619 GACGGTAGCACGGATTATCTTG 58.949 50.000 0.00 0.00 38.39 3.02
2423 3388 4.116961 CGGTAGCACGGATTATCTTGAAA 58.883 43.478 0.00 0.00 0.00 2.69
2435 3400 7.254761 CGGATTATCTTGAAACGATTTGGATGA 60.255 37.037 0.00 0.00 0.00 2.92
2447 3412 5.462398 ACGATTTGGATGACGAGCTAATAAC 59.538 40.000 0.00 0.00 0.00 1.89
2472 3437 5.484290 AGGCTAGGTGTTTAGTCATTGTAGT 59.516 40.000 0.00 0.00 0.00 2.73
2476 3441 7.980099 GCTAGGTGTTTAGTCATTGTAGTATGT 59.020 37.037 0.00 0.00 0.00 2.29
2564 3542 7.439381 CAGTACTGGACCTTAGACTTTGTTTA 58.561 38.462 15.49 0.00 0.00 2.01
2593 3571 8.031848 ACTTTTGGTTAATAAATTGCATGCAG 57.968 30.769 21.50 5.30 0.00 4.41
2672 3650 9.812347 AAAATTATTGGACCTAGATATGCATCA 57.188 29.630 0.19 0.00 33.21 3.07
2673 3651 9.458727 AAATTATTGGACCTAGATATGCATCAG 57.541 33.333 0.19 0.00 33.21 2.90
2674 3652 7.797121 TTATTGGACCTAGATATGCATCAGA 57.203 36.000 0.19 0.00 33.21 3.27
2675 3653 6.692849 ATTGGACCTAGATATGCATCAGAA 57.307 37.500 0.19 0.00 33.21 3.02
2676 3654 5.735285 TGGACCTAGATATGCATCAGAAG 57.265 43.478 0.19 0.00 33.21 2.85
2677 3655 5.150715 TGGACCTAGATATGCATCAGAAGT 58.849 41.667 0.19 0.00 33.21 3.01
2678 3656 5.604231 TGGACCTAGATATGCATCAGAAGTT 59.396 40.000 0.19 0.00 33.21 2.66
2679 3657 6.782494 TGGACCTAGATATGCATCAGAAGTTA 59.218 38.462 0.19 0.00 33.21 2.24
2680 3658 7.039434 TGGACCTAGATATGCATCAGAAGTTAG 60.039 40.741 0.19 0.00 33.21 2.34
2681 3659 7.177568 GGACCTAGATATGCATCAGAAGTTAGA 59.822 40.741 0.19 0.00 33.21 2.10
2682 3660 8.663209 ACCTAGATATGCATCAGAAGTTAGAT 57.337 34.615 0.19 0.00 33.21 1.98
2683 3661 9.099071 ACCTAGATATGCATCAGAAGTTAGATT 57.901 33.333 0.19 0.00 33.21 2.40
2684 3662 9.941325 CCTAGATATGCATCAGAAGTTAGATTT 57.059 33.333 0.19 0.00 33.21 2.17
2690 3668 7.088589 TGCATCAGAAGTTAGATTTTTAGGC 57.911 36.000 0.00 0.00 0.00 3.93
2691 3669 6.658816 TGCATCAGAAGTTAGATTTTTAGGCA 59.341 34.615 0.00 0.00 0.00 4.75
2692 3670 7.148188 TGCATCAGAAGTTAGATTTTTAGGCAG 60.148 37.037 0.00 0.00 0.00 4.85
2693 3671 7.148171 GCATCAGAAGTTAGATTTTTAGGCAGT 60.148 37.037 0.00 0.00 0.00 4.40
2694 3672 8.734386 CATCAGAAGTTAGATTTTTAGGCAGTT 58.266 33.333 0.00 0.00 0.00 3.16
2695 3673 8.324163 TCAGAAGTTAGATTTTTAGGCAGTTC 57.676 34.615 0.00 0.00 0.00 3.01
2696 3674 7.117812 TCAGAAGTTAGATTTTTAGGCAGTTCG 59.882 37.037 0.00 0.00 0.00 3.95
2697 3675 6.935208 AGAAGTTAGATTTTTAGGCAGTTCGT 59.065 34.615 0.00 0.00 0.00 3.85
2698 3676 8.092687 AGAAGTTAGATTTTTAGGCAGTTCGTA 58.907 33.333 0.00 0.00 0.00 3.43
2699 3677 7.829378 AGTTAGATTTTTAGGCAGTTCGTAG 57.171 36.000 0.00 0.00 0.00 3.51
2700 3678 6.817140 AGTTAGATTTTTAGGCAGTTCGTAGG 59.183 38.462 0.00 0.00 0.00 3.18
2701 3679 5.416271 AGATTTTTAGGCAGTTCGTAGGA 57.584 39.130 0.00 0.00 0.00 2.94
2702 3680 5.990668 AGATTTTTAGGCAGTTCGTAGGAT 58.009 37.500 0.00 0.00 0.00 3.24
2703 3681 5.817816 AGATTTTTAGGCAGTTCGTAGGATG 59.182 40.000 0.00 0.00 0.00 3.51
2704 3682 4.546829 TTTTAGGCAGTTCGTAGGATGT 57.453 40.909 0.00 0.00 0.00 3.06
2705 3683 4.546829 TTTAGGCAGTTCGTAGGATGTT 57.453 40.909 0.00 0.00 0.00 2.71
2706 3684 5.664294 TTTAGGCAGTTCGTAGGATGTTA 57.336 39.130 0.00 0.00 0.00 2.41
2707 3685 5.864418 TTAGGCAGTTCGTAGGATGTTAT 57.136 39.130 0.00 0.00 0.00 1.89
2708 3686 4.323553 AGGCAGTTCGTAGGATGTTATC 57.676 45.455 0.00 0.00 0.00 1.75
2719 3697 3.528597 GGATGTTATCCCTATCTCCGC 57.471 52.381 0.00 0.00 43.88 5.54
2720 3698 2.168728 GGATGTTATCCCTATCTCCGCC 59.831 54.545 0.00 0.00 43.88 6.13
2721 3699 2.391926 TGTTATCCCTATCTCCGCCA 57.608 50.000 0.00 0.00 0.00 5.69
2722 3700 2.684943 TGTTATCCCTATCTCCGCCAA 58.315 47.619 0.00 0.00 0.00 4.52
2723 3701 3.042682 TGTTATCCCTATCTCCGCCAAA 58.957 45.455 0.00 0.00 0.00 3.28
2724 3702 3.650942 TGTTATCCCTATCTCCGCCAAAT 59.349 43.478 0.00 0.00 0.00 2.32
2725 3703 4.254492 GTTATCCCTATCTCCGCCAAATC 58.746 47.826 0.00 0.00 0.00 2.17
2726 3704 0.679505 TCCCTATCTCCGCCAAATCG 59.320 55.000 0.00 0.00 0.00 3.34
2727 3705 0.951040 CCCTATCTCCGCCAAATCGC 60.951 60.000 0.00 0.00 0.00 4.58
2728 3706 0.951040 CCTATCTCCGCCAAATCGCC 60.951 60.000 0.00 0.00 0.00 5.54
2729 3707 1.284982 CTATCTCCGCCAAATCGCCG 61.285 60.000 0.00 0.00 0.00 6.46
2730 3708 2.709125 TATCTCCGCCAAATCGCCGG 62.709 60.000 0.00 0.00 43.21 6.13
2732 3710 3.726595 CTCCGCCAAATCGCCGGTA 62.727 63.158 1.90 0.00 42.48 4.02
2733 3711 2.820479 CCGCCAAATCGCCGGTAA 60.820 61.111 1.90 0.00 37.36 2.85
2734 3712 2.707039 CGCCAAATCGCCGGTAAG 59.293 61.111 1.90 0.00 0.00 2.34
2735 3713 2.104253 CGCCAAATCGCCGGTAAGT 61.104 57.895 1.90 0.00 0.00 2.24
2736 3714 1.427819 GCCAAATCGCCGGTAAGTG 59.572 57.895 1.90 0.00 0.00 3.16
2737 3715 1.988834 GCCAAATCGCCGGTAAGTGG 61.989 60.000 1.90 6.13 0.00 4.00
2738 3716 0.391927 CCAAATCGCCGGTAAGTGGA 60.392 55.000 1.90 0.00 0.00 4.02
2739 3717 1.444836 CAAATCGCCGGTAAGTGGAA 58.555 50.000 1.90 0.00 0.00 3.53
2740 3718 1.807742 CAAATCGCCGGTAAGTGGAAA 59.192 47.619 1.90 0.00 0.00 3.13
2741 3719 1.445871 AATCGCCGGTAAGTGGAAAC 58.554 50.000 1.90 0.00 0.00 2.78
2742 3720 0.738412 ATCGCCGGTAAGTGGAAACG 60.738 55.000 1.90 0.00 0.00 3.60
2743 3721 1.373246 CGCCGGTAAGTGGAAACGA 60.373 57.895 1.90 0.00 0.00 3.85
2744 3722 0.945265 CGCCGGTAAGTGGAAACGAA 60.945 55.000 1.90 0.00 0.00 3.85
2745 3723 1.228533 GCCGGTAAGTGGAAACGAAA 58.771 50.000 1.90 0.00 0.00 3.46
2746 3724 1.069703 GCCGGTAAGTGGAAACGAAAC 60.070 52.381 1.90 0.00 0.00 2.78
2747 3725 2.486918 CCGGTAAGTGGAAACGAAACT 58.513 47.619 0.00 0.00 0.00 2.66
2748 3726 2.222445 CCGGTAAGTGGAAACGAAACTG 59.778 50.000 0.00 0.00 0.00 3.16
2749 3727 2.349155 CGGTAAGTGGAAACGAAACTGC 60.349 50.000 0.00 0.00 0.00 4.40
2750 3728 2.876550 GGTAAGTGGAAACGAAACTGCT 59.123 45.455 0.00 0.00 0.00 4.24
2751 3729 3.059120 GGTAAGTGGAAACGAAACTGCTC 60.059 47.826 0.00 0.00 0.00 4.26
2752 3730 1.594331 AGTGGAAACGAAACTGCTCC 58.406 50.000 0.00 0.00 0.00 4.70
2753 3731 1.134220 AGTGGAAACGAAACTGCTCCA 60.134 47.619 0.00 0.00 33.77 3.86
2754 3732 1.002792 GTGGAAACGAAACTGCTCCAC 60.003 52.381 3.95 3.95 46.70 4.02
2755 3733 1.305201 GGAAACGAAACTGCTCCACA 58.695 50.000 0.00 0.00 0.00 4.17
2766 3744 1.795768 TGCTCCACAGACGATGTTTC 58.204 50.000 0.00 0.00 41.41 2.78
2767 3745 1.344438 TGCTCCACAGACGATGTTTCT 59.656 47.619 0.00 0.00 41.41 2.52
2768 3746 1.728971 GCTCCACAGACGATGTTTCTG 59.271 52.381 0.00 0.00 41.41 3.02
2769 3747 1.728971 CTCCACAGACGATGTTTCTGC 59.271 52.381 0.00 0.00 43.79 4.26
2770 3748 0.798776 CCACAGACGATGTTTCTGCC 59.201 55.000 0.00 0.00 43.79 4.85
2771 3749 0.798776 CACAGACGATGTTTCTGCCC 59.201 55.000 0.00 0.00 43.79 5.36
2772 3750 0.670546 ACAGACGATGTTTCTGCCCG 60.671 55.000 0.00 0.00 43.79 6.13
2773 3751 0.389817 CAGACGATGTTTCTGCCCGA 60.390 55.000 0.00 0.00 34.41 5.14
2774 3752 0.389948 AGACGATGTTTCTGCCCGAC 60.390 55.000 0.00 0.00 0.00 4.79
2775 3753 1.359459 GACGATGTTTCTGCCCGACC 61.359 60.000 0.00 0.00 0.00 4.79
2776 3754 1.079127 CGATGTTTCTGCCCGACCT 60.079 57.895 0.00 0.00 0.00 3.85
2777 3755 0.174845 CGATGTTTCTGCCCGACCTA 59.825 55.000 0.00 0.00 0.00 3.08
2778 3756 1.202533 CGATGTTTCTGCCCGACCTAT 60.203 52.381 0.00 0.00 0.00 2.57
2779 3757 2.213499 GATGTTTCTGCCCGACCTATG 58.787 52.381 0.00 0.00 0.00 2.23
2780 3758 0.392461 TGTTTCTGCCCGACCTATGC 60.392 55.000 0.00 0.00 0.00 3.14
2781 3759 0.392461 GTTTCTGCCCGACCTATGCA 60.392 55.000 0.00 0.00 0.00 3.96
2782 3760 0.392461 TTTCTGCCCGACCTATGCAC 60.392 55.000 0.00 0.00 0.00 4.57
2783 3761 2.572095 TTCTGCCCGACCTATGCACG 62.572 60.000 0.00 0.00 0.00 5.34
2784 3762 3.071837 TGCCCGACCTATGCACGA 61.072 61.111 0.00 0.00 0.00 4.35
2785 3763 2.585247 GCCCGACCTATGCACGAC 60.585 66.667 0.00 0.00 0.00 4.34
2786 3764 2.106332 CCCGACCTATGCACGACC 59.894 66.667 0.00 0.00 0.00 4.79
2787 3765 2.423898 CCCGACCTATGCACGACCT 61.424 63.158 0.00 0.00 0.00 3.85
2788 3766 1.226974 CCGACCTATGCACGACCTG 60.227 63.158 0.00 0.00 0.00 4.00
2789 3767 1.663379 CCGACCTATGCACGACCTGA 61.663 60.000 0.00 0.00 0.00 3.86
2790 3768 0.172578 CGACCTATGCACGACCTGAA 59.827 55.000 0.00 0.00 0.00 3.02
2791 3769 1.403647 CGACCTATGCACGACCTGAAA 60.404 52.381 0.00 0.00 0.00 2.69
2792 3770 2.695359 GACCTATGCACGACCTGAAAA 58.305 47.619 0.00 0.00 0.00 2.29
2793 3771 3.270877 GACCTATGCACGACCTGAAAAT 58.729 45.455 0.00 0.00 0.00 1.82
2794 3772 3.270877 ACCTATGCACGACCTGAAAATC 58.729 45.455 0.00 0.00 0.00 2.17
2795 3773 2.614057 CCTATGCACGACCTGAAAATCC 59.386 50.000 0.00 0.00 0.00 3.01
2796 3774 2.198827 ATGCACGACCTGAAAATCCA 57.801 45.000 0.00 0.00 0.00 3.41
2797 3775 1.522668 TGCACGACCTGAAAATCCAG 58.477 50.000 0.00 0.00 0.00 3.86
2798 3776 0.169009 GCACGACCTGAAAATCCAGC 59.831 55.000 0.00 0.00 32.97 4.85
2799 3777 0.443869 CACGACCTGAAAATCCAGCG 59.556 55.000 0.00 0.00 32.97 5.18
2800 3778 0.673644 ACGACCTGAAAATCCAGCGG 60.674 55.000 0.00 0.00 32.97 5.52
2801 3779 1.803289 GACCTGAAAATCCAGCGGC 59.197 57.895 0.00 0.00 32.97 6.53
2802 3780 1.657751 GACCTGAAAATCCAGCGGCC 61.658 60.000 0.00 0.00 32.97 6.13
2803 3781 2.764314 CCTGAAAATCCAGCGGCCG 61.764 63.158 24.05 24.05 32.97 6.13
2804 3782 2.749839 TGAAAATCCAGCGGCCGG 60.750 61.111 29.38 11.34 0.00 6.13
2805 3783 2.750237 GAAAATCCAGCGGCCGGT 60.750 61.111 26.97 26.97 0.00 5.28
2806 3784 1.450669 GAAAATCCAGCGGCCGGTA 60.451 57.895 31.92 16.97 0.00 4.02
2807 3785 1.712018 GAAAATCCAGCGGCCGGTAC 61.712 60.000 31.92 11.93 0.00 3.34
2808 3786 3.692370 AAATCCAGCGGCCGGTACC 62.692 63.158 31.92 11.50 0.00 3.34
2815 3793 3.463585 CGGCCGGTACCCTGCTTA 61.464 66.667 20.10 0.00 34.18 3.09
2816 3794 2.803817 CGGCCGGTACCCTGCTTAT 61.804 63.158 20.10 0.00 34.18 1.73
2817 3795 1.070957 GGCCGGTACCCTGCTTATC 59.929 63.158 17.84 1.33 34.18 1.75
2818 3796 1.692173 GGCCGGTACCCTGCTTATCA 61.692 60.000 17.84 0.00 34.18 2.15
2819 3797 0.396811 GCCGGTACCCTGCTTATCAT 59.603 55.000 6.25 0.00 31.02 2.45
2820 3798 1.878102 GCCGGTACCCTGCTTATCATG 60.878 57.143 6.25 0.00 31.02 3.07
2821 3799 1.512926 CGGTACCCTGCTTATCATGC 58.487 55.000 6.25 0.00 0.00 4.06
2822 3800 1.512926 GGTACCCTGCTTATCATGCG 58.487 55.000 0.00 0.00 0.00 4.73
2823 3801 0.868406 GTACCCTGCTTATCATGCGC 59.132 55.000 0.00 0.00 0.00 6.09
2824 3802 0.467804 TACCCTGCTTATCATGCGCA 59.532 50.000 14.96 14.96 0.00 6.09
2825 3803 0.179009 ACCCTGCTTATCATGCGCAT 60.179 50.000 19.28 19.28 32.62 4.73
2826 3804 0.240145 CCCTGCTTATCATGCGCATG 59.760 55.000 38.48 38.48 40.09 4.06
2827 3805 0.949397 CCTGCTTATCATGCGCATGT 59.051 50.000 40.57 30.95 39.72 3.21
2828 3806 1.335810 CCTGCTTATCATGCGCATGTT 59.664 47.619 40.57 35.41 39.72 2.71
2829 3807 2.603892 CCTGCTTATCATGCGCATGTTC 60.604 50.000 40.57 27.12 39.72 3.18
2830 3808 1.003652 TGCTTATCATGCGCATGTTCG 60.004 47.619 40.57 28.46 39.72 3.95
2831 3809 1.661178 GCTTATCATGCGCATGTTCGG 60.661 52.381 40.57 29.86 39.72 4.30
2832 3810 1.599071 CTTATCATGCGCATGTTCGGT 59.401 47.619 40.57 26.38 39.72 4.69
2833 3811 1.662517 TATCATGCGCATGTTCGGTT 58.337 45.000 40.57 24.28 39.72 4.44
2834 3812 0.099259 ATCATGCGCATGTTCGGTTG 59.901 50.000 40.57 21.58 39.72 3.77
2835 3813 1.514657 CATGCGCATGTTCGGTTGG 60.515 57.895 36.45 12.78 34.23 3.77
2836 3814 1.673993 ATGCGCATGTTCGGTTGGA 60.674 52.632 24.69 0.00 0.00 3.53
2837 3815 1.031571 ATGCGCATGTTCGGTTGGAT 61.032 50.000 24.69 0.00 0.00 3.41
2838 3816 1.240641 TGCGCATGTTCGGTTGGATT 61.241 50.000 5.66 0.00 0.00 3.01
2839 3817 0.109319 GCGCATGTTCGGTTGGATTT 60.109 50.000 0.30 0.00 0.00 2.17
2840 3818 1.131504 GCGCATGTTCGGTTGGATTTA 59.868 47.619 0.30 0.00 0.00 1.40
2841 3819 2.223479 GCGCATGTTCGGTTGGATTTAT 60.223 45.455 0.30 0.00 0.00 1.40
2842 3820 3.362295 CGCATGTTCGGTTGGATTTATG 58.638 45.455 0.00 0.00 0.00 1.90
2843 3821 3.181501 CGCATGTTCGGTTGGATTTATGT 60.182 43.478 0.00 0.00 0.00 2.29
2844 3822 4.104776 GCATGTTCGGTTGGATTTATGTG 58.895 43.478 0.00 0.00 0.00 3.21
2845 3823 4.380444 GCATGTTCGGTTGGATTTATGTGT 60.380 41.667 0.00 0.00 0.00 3.72
2846 3824 5.331902 CATGTTCGGTTGGATTTATGTGTC 58.668 41.667 0.00 0.00 0.00 3.67
2847 3825 3.433957 TGTTCGGTTGGATTTATGTGTCG 59.566 43.478 0.00 0.00 0.00 4.35
2848 3826 3.322211 TCGGTTGGATTTATGTGTCGT 57.678 42.857 0.00 0.00 0.00 4.34
2849 3827 2.997303 TCGGTTGGATTTATGTGTCGTG 59.003 45.455 0.00 0.00 0.00 4.35
2850 3828 2.739913 CGGTTGGATTTATGTGTCGTGT 59.260 45.455 0.00 0.00 0.00 4.49
2851 3829 3.424302 CGGTTGGATTTATGTGTCGTGTG 60.424 47.826 0.00 0.00 0.00 3.82
2852 3830 3.500680 GGTTGGATTTATGTGTCGTGTGT 59.499 43.478 0.00 0.00 0.00 3.72
2853 3831 4.463209 GTTGGATTTATGTGTCGTGTGTG 58.537 43.478 0.00 0.00 0.00 3.82
2854 3832 2.482336 TGGATTTATGTGTCGTGTGTGC 59.518 45.455 0.00 0.00 0.00 4.57
2855 3833 2.482336 GGATTTATGTGTCGTGTGTGCA 59.518 45.455 0.00 0.00 0.00 4.57
2856 3834 3.126858 GGATTTATGTGTCGTGTGTGCAT 59.873 43.478 0.00 0.00 0.00 3.96
2857 3835 3.804518 TTTATGTGTCGTGTGTGCATC 57.195 42.857 0.00 0.00 0.00 3.91
2858 3836 1.345410 TATGTGTCGTGTGTGCATCG 58.655 50.000 0.00 0.00 0.00 3.84
2859 3837 0.599991 ATGTGTCGTGTGTGCATCGT 60.600 50.000 0.00 0.00 0.00 3.73
2860 3838 1.212455 TGTGTCGTGTGTGCATCGTC 61.212 55.000 0.00 0.00 0.00 4.20
2861 3839 0.939577 GTGTCGTGTGTGCATCGTCT 60.940 55.000 0.00 0.00 0.00 4.18
2862 3840 0.939106 TGTCGTGTGTGCATCGTCTG 60.939 55.000 0.00 0.00 0.00 3.51
2863 3841 0.663269 GTCGTGTGTGCATCGTCTGA 60.663 55.000 0.00 0.00 0.00 3.27
2864 3842 0.031449 TCGTGTGTGCATCGTCTGAA 59.969 50.000 0.00 0.00 0.00 3.02
2865 3843 1.070821 CGTGTGTGCATCGTCTGAAT 58.929 50.000 0.00 0.00 0.00 2.57
2866 3844 1.460743 CGTGTGTGCATCGTCTGAATT 59.539 47.619 0.00 0.00 0.00 2.17
2867 3845 2.722706 CGTGTGTGCATCGTCTGAATTG 60.723 50.000 0.00 0.00 0.00 2.32
2868 3846 2.224079 GTGTGTGCATCGTCTGAATTGT 59.776 45.455 0.00 0.00 0.00 2.71
2869 3847 2.223845 TGTGTGCATCGTCTGAATTGTG 59.776 45.455 0.00 0.00 0.00 3.33
2870 3848 2.224079 GTGTGCATCGTCTGAATTGTGT 59.776 45.455 0.00 0.00 0.00 3.72
2871 3849 2.480037 TGTGCATCGTCTGAATTGTGTC 59.520 45.455 0.00 0.00 0.00 3.67
2872 3850 1.726248 TGCATCGTCTGAATTGTGTCG 59.274 47.619 0.00 0.00 0.00 4.35
2873 3851 1.726791 GCATCGTCTGAATTGTGTCGT 59.273 47.619 0.00 0.00 0.00 4.34
2874 3852 2.222596 GCATCGTCTGAATTGTGTCGTC 60.223 50.000 0.00 0.00 0.00 4.20
2875 3853 2.060326 TCGTCTGAATTGTGTCGTCC 57.940 50.000 0.00 0.00 0.00 4.79
2876 3854 0.708370 CGTCTGAATTGTGTCGTCCG 59.292 55.000 0.00 0.00 0.00 4.79
2877 3855 0.438830 GTCTGAATTGTGTCGTCCGC 59.561 55.000 0.00 0.00 0.00 5.54
2878 3856 0.032815 TCTGAATTGTGTCGTCCGCA 59.967 50.000 0.00 0.00 0.00 5.69
2879 3857 1.078709 CTGAATTGTGTCGTCCGCAT 58.921 50.000 0.00 0.00 32.58 4.73
2880 3858 2.094442 TCTGAATTGTGTCGTCCGCATA 60.094 45.455 0.00 0.00 32.58 3.14
2881 3859 2.267426 TGAATTGTGTCGTCCGCATAG 58.733 47.619 0.00 0.00 32.58 2.23
2882 3860 1.004927 GAATTGTGTCGTCCGCATAGC 60.005 52.381 0.00 0.00 32.58 2.97
2883 3861 0.108377 ATTGTGTCGTCCGCATAGCA 60.108 50.000 0.00 0.00 32.58 3.49
2884 3862 1.011968 TTGTGTCGTCCGCATAGCAC 61.012 55.000 0.00 0.00 32.58 4.40
2885 3863 1.153823 GTGTCGTCCGCATAGCACT 60.154 57.895 0.00 0.00 0.00 4.40
2886 3864 1.153842 TGTCGTCCGCATAGCACTG 60.154 57.895 0.00 0.00 0.00 3.66
2887 3865 2.202743 TCGTCCGCATAGCACTGC 60.203 61.111 0.00 0.00 38.81 4.40
2888 3866 2.202797 CGTCCGCATAGCACTGCT 60.203 61.111 8.95 8.95 43.41 4.24
2889 3867 2.520039 CGTCCGCATAGCACTGCTG 61.520 63.158 14.15 0.00 40.10 4.41
2890 3868 1.153568 GTCCGCATAGCACTGCTGA 60.154 57.895 14.15 0.00 40.10 4.26
2891 3869 0.740868 GTCCGCATAGCACTGCTGAA 60.741 55.000 14.15 0.00 40.10 3.02
2892 3870 0.460811 TCCGCATAGCACTGCTGAAG 60.461 55.000 14.15 4.51 40.10 3.02
2893 3871 0.742281 CCGCATAGCACTGCTGAAGT 60.742 55.000 14.15 0.00 40.10 3.01
2901 3879 3.421567 ACTGCTGAAGTGGAAACCC 57.578 52.632 0.00 0.00 37.88 4.11
2902 3880 0.550914 ACTGCTGAAGTGGAAACCCA 59.449 50.000 0.00 0.00 37.88 4.51
2903 3881 1.242076 CTGCTGAAGTGGAAACCCAG 58.758 55.000 0.00 0.00 33.65 4.45
2904 3882 0.178992 TGCTGAAGTGGAAACCCAGG 60.179 55.000 0.00 0.00 33.65 4.45
2905 3883 1.527433 GCTGAAGTGGAAACCCAGGC 61.527 60.000 0.00 0.00 33.65 4.85
2906 3884 0.178992 CTGAAGTGGAAACCCAGGCA 60.179 55.000 0.00 0.00 33.65 4.75
2907 3885 0.482446 TGAAGTGGAAACCCAGGCAT 59.518 50.000 0.00 0.00 33.65 4.40
2908 3886 1.707989 TGAAGTGGAAACCCAGGCATA 59.292 47.619 0.00 0.00 33.65 3.14
2909 3887 2.109128 TGAAGTGGAAACCCAGGCATAA 59.891 45.455 0.00 0.00 33.65 1.90
2910 3888 2.514458 AGTGGAAACCCAGGCATAAG 57.486 50.000 0.00 0.00 33.65 1.73
2911 3889 1.710809 AGTGGAAACCCAGGCATAAGT 59.289 47.619 0.00 0.00 33.65 2.24
2912 3890 1.818674 GTGGAAACCCAGGCATAAGTG 59.181 52.381 0.00 0.00 33.65 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 0.036952 ACACGAGCACCAAGGATGAG 60.037 55.000 0.00 0.00 0.00 2.90
30 31 2.975536 CAAGGGCAAGCACATGGG 59.024 61.111 0.00 0.00 0.00 4.00
33 34 1.117142 ACAAGCAAGGGCAAGCACAT 61.117 50.000 0.00 0.00 44.61 3.21
35 36 1.300388 CACAAGCAAGGGCAAGCAC 60.300 57.895 0.00 0.00 44.61 4.40
40 41 2.594303 CGGACACAAGCAAGGGCA 60.594 61.111 0.00 0.00 44.61 5.36
41 42 2.594592 ACGGACACAAGCAAGGGC 60.595 61.111 0.00 0.00 41.61 5.19
44 45 2.093306 TATGGACGGACACAAGCAAG 57.907 50.000 0.00 0.00 0.00 4.01
46 47 1.831106 AGATATGGACGGACACAAGCA 59.169 47.619 0.00 0.00 0.00 3.91
48 49 5.223382 GTCATAGATATGGACGGACACAAG 58.777 45.833 0.19 0.00 34.50 3.16
65 66 1.139058 CCAACCGAAGAGGGGTCATAG 59.861 57.143 0.00 0.00 46.96 2.23
81 82 1.198759 TCTACCTCCACCCAGCCAAC 61.199 60.000 0.00 0.00 0.00 3.77
82 83 0.253160 ATCTACCTCCACCCAGCCAA 60.253 55.000 0.00 0.00 0.00 4.52
88 89 1.486726 CCACAAGATCTACCTCCACCC 59.513 57.143 0.00 0.00 0.00 4.61
103 104 0.322098 CCATCTACCCAACGCCACAA 60.322 55.000 0.00 0.00 0.00 3.33
116 117 0.251916 CCAAACCACGAGGCCATCTA 59.748 55.000 5.01 0.00 39.06 1.98
117 118 1.002134 CCAAACCACGAGGCCATCT 60.002 57.895 5.01 0.00 39.06 2.90
127 128 3.692593 AGTACACAACTTCACCAAACCAC 59.307 43.478 0.00 0.00 33.35 4.16
129 130 3.942748 TGAGTACACAACTTCACCAAACC 59.057 43.478 0.00 0.00 39.07 3.27
176 177 1.559831 TCGTTGATGTAGCATCGCTG 58.440 50.000 0.00 0.00 40.10 5.18
177 178 1.927174 GTTCGTTGATGTAGCATCGCT 59.073 47.619 4.89 0.00 43.41 4.93
178 179 1.927174 AGTTCGTTGATGTAGCATCGC 59.073 47.619 4.89 0.58 32.60 4.58
179 180 2.535984 GGAGTTCGTTGATGTAGCATCG 59.464 50.000 4.89 0.00 33.53 3.84
180 181 3.786635 AGGAGTTCGTTGATGTAGCATC 58.213 45.455 2.44 2.44 0.00 3.91
181 182 3.895232 AGGAGTTCGTTGATGTAGCAT 57.105 42.857 0.00 0.00 0.00 3.79
182 183 3.508402 TGTAGGAGTTCGTTGATGTAGCA 59.492 43.478 0.00 0.00 0.00 3.49
183 184 4.106029 TGTAGGAGTTCGTTGATGTAGC 57.894 45.455 0.00 0.00 0.00 3.58
184 185 4.673441 CCTGTAGGAGTTCGTTGATGTAG 58.327 47.826 0.00 0.00 37.39 2.74
185 186 3.119245 GCCTGTAGGAGTTCGTTGATGTA 60.119 47.826 1.17 0.00 37.39 2.29
186 187 2.353803 GCCTGTAGGAGTTCGTTGATGT 60.354 50.000 1.17 0.00 37.39 3.06
187 188 2.271800 GCCTGTAGGAGTTCGTTGATG 58.728 52.381 1.17 0.00 37.39 3.07
188 189 1.135083 CGCCTGTAGGAGTTCGTTGAT 60.135 52.381 1.17 0.00 37.39 2.57
189 190 0.242825 CGCCTGTAGGAGTTCGTTGA 59.757 55.000 1.17 0.00 37.39 3.18
190 191 0.038526 ACGCCTGTAGGAGTTCGTTG 60.039 55.000 1.17 0.00 46.20 4.10
191 192 2.348665 ACGCCTGTAGGAGTTCGTT 58.651 52.632 1.17 0.00 46.20 3.85
192 193 4.092343 ACGCCTGTAGGAGTTCGT 57.908 55.556 1.17 0.00 46.20 3.85
197 198 2.618053 CCTGTAAAACGCCTGTAGGAG 58.382 52.381 1.17 0.42 41.06 3.69
198 199 1.276989 CCCTGTAAAACGCCTGTAGGA 59.723 52.381 1.17 0.00 37.39 2.94
199 200 1.002773 ACCCTGTAAAACGCCTGTAGG 59.997 52.381 0.00 0.00 38.53 3.18
200 201 2.073816 CACCCTGTAAAACGCCTGTAG 58.926 52.381 0.00 0.00 0.00 2.74
201 202 1.693062 TCACCCTGTAAAACGCCTGTA 59.307 47.619 0.00 0.00 0.00 2.74
202 203 0.470766 TCACCCTGTAAAACGCCTGT 59.529 50.000 0.00 0.00 0.00 4.00
203 204 1.600023 TTCACCCTGTAAAACGCCTG 58.400 50.000 0.00 0.00 0.00 4.85
204 205 2.579410 ATTCACCCTGTAAAACGCCT 57.421 45.000 0.00 0.00 0.00 5.52
205 206 3.004944 TCAAATTCACCCTGTAAAACGCC 59.995 43.478 0.00 0.00 0.00 5.68
206 207 4.226761 CTCAAATTCACCCTGTAAAACGC 58.773 43.478 0.00 0.00 0.00 4.84
207 208 5.432885 ACTCAAATTCACCCTGTAAAACG 57.567 39.130 0.00 0.00 0.00 3.60
208 209 6.569780 ACAACTCAAATTCACCCTGTAAAAC 58.430 36.000 0.00 0.00 0.00 2.43
209 210 6.378564 TGACAACTCAAATTCACCCTGTAAAA 59.621 34.615 0.00 0.00 0.00 1.52
210 211 5.888724 TGACAACTCAAATTCACCCTGTAAA 59.111 36.000 0.00 0.00 0.00 2.01
211 212 5.441500 TGACAACTCAAATTCACCCTGTAA 58.558 37.500 0.00 0.00 0.00 2.41
212 213 5.042463 TGACAACTCAAATTCACCCTGTA 57.958 39.130 0.00 0.00 0.00 2.74
213 214 3.897239 TGACAACTCAAATTCACCCTGT 58.103 40.909 0.00 0.00 0.00 4.00
214 215 4.916983 TTGACAACTCAAATTCACCCTG 57.083 40.909 0.00 0.00 33.20 4.45
215 216 4.956075 ACTTTGACAACTCAAATTCACCCT 59.044 37.500 0.00 0.00 43.89 4.34
216 217 5.043248 CACTTTGACAACTCAAATTCACCC 58.957 41.667 0.00 0.00 43.89 4.61
217 218 5.650543 ACACTTTGACAACTCAAATTCACC 58.349 37.500 0.00 0.00 43.89 4.02
218 219 8.856490 ATAACACTTTGACAACTCAAATTCAC 57.144 30.769 0.00 0.00 43.89 3.18
219 220 9.299963 CAATAACACTTTGACAACTCAAATTCA 57.700 29.630 0.00 0.00 43.89 2.57
220 221 8.755018 CCAATAACACTTTGACAACTCAAATTC 58.245 33.333 0.00 0.00 43.89 2.17
221 222 8.474025 TCCAATAACACTTTGACAACTCAAATT 58.526 29.630 0.00 0.00 43.89 1.82
222 223 7.920682 GTCCAATAACACTTTGACAACTCAAAT 59.079 33.333 0.00 0.00 43.89 2.32
223 224 7.094162 TGTCCAATAACACTTTGACAACTCAAA 60.094 33.333 0.00 0.00 42.93 2.69
224 225 6.375736 TGTCCAATAACACTTTGACAACTCAA 59.624 34.615 0.00 0.00 34.39 3.02
225 226 5.883115 TGTCCAATAACACTTTGACAACTCA 59.117 36.000 0.00 0.00 0.00 3.41
226 227 6.371809 TGTCCAATAACACTTTGACAACTC 57.628 37.500 0.00 0.00 0.00 3.01
227 228 6.767524 TTGTCCAATAACACTTTGACAACT 57.232 33.333 0.00 0.00 0.00 3.16
228 229 6.019881 GCTTTGTCCAATAACACTTTGACAAC 60.020 38.462 0.00 0.00 30.84 3.32
229 230 6.039616 GCTTTGTCCAATAACACTTTGACAA 58.960 36.000 0.00 0.00 0.00 3.18
230 231 5.587289 GCTTTGTCCAATAACACTTTGACA 58.413 37.500 0.00 0.00 0.00 3.58
231 232 4.675114 CGCTTTGTCCAATAACACTTTGAC 59.325 41.667 0.00 0.00 0.00 3.18
232 233 4.576873 TCGCTTTGTCCAATAACACTTTGA 59.423 37.500 0.00 0.00 0.00 2.69
233 234 4.854399 TCGCTTTGTCCAATAACACTTTG 58.146 39.130 0.00 0.00 0.00 2.77
234 235 4.023193 CCTCGCTTTGTCCAATAACACTTT 60.023 41.667 0.00 0.00 0.00 2.66
235 236 3.502211 CCTCGCTTTGTCCAATAACACTT 59.498 43.478 0.00 0.00 0.00 3.16
236 237 3.074412 CCTCGCTTTGTCCAATAACACT 58.926 45.455 0.00 0.00 0.00 3.55
237 238 2.161609 CCCTCGCTTTGTCCAATAACAC 59.838 50.000 0.00 0.00 0.00 3.32
238 239 2.432444 CCCTCGCTTTGTCCAATAACA 58.568 47.619 0.00 0.00 0.00 2.41
239 240 1.743394 CCCCTCGCTTTGTCCAATAAC 59.257 52.381 0.00 0.00 0.00 1.89
240 241 2.122783 CCCCTCGCTTTGTCCAATAA 57.877 50.000 0.00 0.00 0.00 1.40
241 242 3.873781 CCCCTCGCTTTGTCCAATA 57.126 52.632 0.00 0.00 0.00 1.90
242 243 4.743018 CCCCTCGCTTTGTCCAAT 57.257 55.556 0.00 0.00 0.00 3.16
449 450 1.411246 TGCTACATCGACGGGCTTAAT 59.589 47.619 0.00 0.00 0.00 1.40
450 451 0.818938 TGCTACATCGACGGGCTTAA 59.181 50.000 0.00 0.00 0.00 1.85
451 452 1.037493 ATGCTACATCGACGGGCTTA 58.963 50.000 0.00 0.00 0.00 3.09
452 453 0.178068 AATGCTACATCGACGGGCTT 59.822 50.000 0.00 0.00 0.00 4.35
453 454 0.178068 AAATGCTACATCGACGGGCT 59.822 50.000 0.00 0.00 0.00 5.19
454 455 1.014352 AAAATGCTACATCGACGGGC 58.986 50.000 0.00 0.00 0.00 6.13
455 456 2.791158 GCAAAAATGCTACATCGACGGG 60.791 50.000 0.00 0.00 0.00 5.28
456 457 2.159585 TGCAAAAATGCTACATCGACGG 60.160 45.455 2.22 0.00 35.49 4.79
457 458 3.116063 TGCAAAAATGCTACATCGACG 57.884 42.857 2.22 0.00 35.49 5.12
458 459 3.853671 CCTTGCAAAAATGCTACATCGAC 59.146 43.478 0.00 0.00 35.49 4.20
459 460 3.673052 GCCTTGCAAAAATGCTACATCGA 60.673 43.478 0.00 0.00 35.49 3.59
460 461 2.599973 GCCTTGCAAAAATGCTACATCG 59.400 45.455 0.00 0.00 35.49 3.84
461 462 3.853475 AGCCTTGCAAAAATGCTACATC 58.147 40.909 0.00 0.00 35.49 3.06
462 463 3.967332 AGCCTTGCAAAAATGCTACAT 57.033 38.095 0.00 0.00 35.49 2.29
463 464 3.181467 ACAAGCCTTGCAAAAATGCTACA 60.181 39.130 3.88 0.00 35.49 2.74
464 465 3.184986 CACAAGCCTTGCAAAAATGCTAC 59.815 43.478 3.88 0.00 35.49 3.58
465 466 3.391965 CACAAGCCTTGCAAAAATGCTA 58.608 40.909 3.88 0.00 35.49 3.49
466 467 2.215196 CACAAGCCTTGCAAAAATGCT 58.785 42.857 3.88 3.59 35.49 3.79
467 468 1.264826 CCACAAGCCTTGCAAAAATGC 59.735 47.619 3.88 1.06 0.00 3.56
468 469 1.264826 GCCACAAGCCTTGCAAAAATG 59.735 47.619 3.88 0.10 34.35 2.32
469 470 1.141455 AGCCACAAGCCTTGCAAAAAT 59.859 42.857 3.88 0.00 45.47 1.82
470 471 0.540923 AGCCACAAGCCTTGCAAAAA 59.459 45.000 3.88 0.00 45.47 1.94
471 472 0.179078 CAGCCACAAGCCTTGCAAAA 60.179 50.000 3.88 0.00 45.47 2.44
472 473 1.042003 TCAGCCACAAGCCTTGCAAA 61.042 50.000 3.88 0.00 45.47 3.68
473 474 0.828762 ATCAGCCACAAGCCTTGCAA 60.829 50.000 3.88 0.00 45.47 4.08
474 475 1.228644 ATCAGCCACAAGCCTTGCA 60.229 52.632 3.88 0.00 45.47 4.08
475 476 1.509923 GATCAGCCACAAGCCTTGC 59.490 57.895 3.88 0.00 45.47 4.01
484 485 1.957177 TCATAGAGACGGATCAGCCAC 59.043 52.381 0.00 0.00 35.94 5.01
488 489 5.461407 CACAAACATCATAGAGACGGATCAG 59.539 44.000 0.00 0.00 0.00 2.90
494 495 4.152223 TGCAACACAAACATCATAGAGACG 59.848 41.667 0.00 0.00 0.00 4.18
498 499 5.299028 ACAACTGCAACACAAACATCATAGA 59.701 36.000 0.00 0.00 0.00 1.98
520 521 8.029782 AGTATTGCCAATCTTATGGTACTACA 57.970 34.615 12.09 0.00 40.93 2.74
530 531 8.635765 AGAAAAGTTGAGTATTGCCAATCTTA 57.364 30.769 0.00 0.00 0.00 2.10
585 1356 2.854300 AATGGGATGGGGCGTTCACC 62.854 60.000 0.00 0.00 0.00 4.02
586 1357 0.970427 AAATGGGATGGGGCGTTCAC 60.970 55.000 0.00 0.00 0.00 3.18
587 1358 0.626382 TAAATGGGATGGGGCGTTCA 59.374 50.000 0.00 0.00 0.00 3.18
588 1359 1.995376 ATAAATGGGATGGGGCGTTC 58.005 50.000 0.00 0.00 0.00 3.95
590 1361 1.063266 ACAATAAATGGGATGGGGCGT 60.063 47.619 0.00 0.00 0.00 5.68
592 1363 4.080638 TGAAAACAATAAATGGGATGGGGC 60.081 41.667 0.00 0.00 0.00 5.80
593 1364 5.690464 TGAAAACAATAAATGGGATGGGG 57.310 39.130 0.00 0.00 0.00 4.96
594 1365 6.818142 GTCTTGAAAACAATAAATGGGATGGG 59.182 38.462 0.00 0.00 0.00 4.00
595 1366 6.531240 CGTCTTGAAAACAATAAATGGGATGG 59.469 38.462 0.00 0.00 0.00 3.51
598 1369 5.010112 TGCGTCTTGAAAACAATAAATGGGA 59.990 36.000 0.00 0.00 0.00 4.37
599 1370 5.118510 GTGCGTCTTGAAAACAATAAATGGG 59.881 40.000 0.00 0.00 0.00 4.00
601 1372 5.689514 TGGTGCGTCTTGAAAACAATAAATG 59.310 36.000 0.00 0.00 0.00 2.32
604 1375 4.902443 TGGTGCGTCTTGAAAACAATAA 57.098 36.364 0.00 0.00 0.00 1.40
718 1659 3.002656 CGCCATAGTATGCCAAAGTTGAG 59.997 47.826 4.47 0.00 0.00 3.02
749 1690 4.019771 TCCTATGTGTCTGTATGGTGCAAA 60.020 41.667 0.00 0.00 0.00 3.68
763 1704 3.500680 ACGCAAAAATCGTTCCTATGTGT 59.499 39.130 0.00 0.00 36.72 3.72
765 1706 3.669557 GCACGCAAAAATCGTTCCTATGT 60.670 43.478 0.00 0.00 38.19 2.29
766 1707 2.845967 GCACGCAAAAATCGTTCCTATG 59.154 45.455 0.00 0.00 38.19 2.23
768 1709 1.874231 TGCACGCAAAAATCGTTCCTA 59.126 42.857 0.00 0.00 38.19 2.94
783 1731 1.659335 CTGTTTGCCAGCTTGCACG 60.659 57.895 12.77 0.00 41.88 5.34
794 1742 5.740406 CCACACATTCATTTTTCTGTTTGC 58.260 37.500 0.00 0.00 0.00 3.68
802 1750 5.280654 ACTTCAGCCACACATTCATTTTT 57.719 34.783 0.00 0.00 0.00 1.94
803 1751 4.942761 ACTTCAGCCACACATTCATTTT 57.057 36.364 0.00 0.00 0.00 1.82
866 1814 2.083835 ATATGTCCCGCGCGCTTACT 62.084 55.000 30.48 10.99 0.00 2.24
911 1860 7.437565 GTCTACTTTTCCGACTTACTTTTCTGT 59.562 37.037 0.00 0.00 0.00 3.41
932 1881 5.237779 TGGTTGATTCTTCAAAACCGTCTAC 59.762 40.000 0.00 0.00 43.29 2.59
942 1891 7.201785 GGACTAGTTGTTTGGTTGATTCTTCAA 60.202 37.037 0.00 0.00 39.54 2.69
943 1892 6.262273 GGACTAGTTGTTTGGTTGATTCTTCA 59.738 38.462 0.00 0.00 0.00 3.02
971 1920 0.246635 TCTTCTGCTAGAACGGTGCC 59.753 55.000 0.00 0.00 29.89 5.01
985 1934 2.618241 CGAGCATAGCAGAGACTCTTCT 59.382 50.000 9.65 9.65 33.37 2.85
991 1940 3.634568 ATACACGAGCATAGCAGAGAC 57.365 47.619 0.00 0.00 0.00 3.36
1010 1959 9.909644 GAACACACGAGGTATATATTGAGTTAT 57.090 33.333 0.00 0.00 0.00 1.89
1011 1960 9.128404 AGAACACACGAGGTATATATTGAGTTA 57.872 33.333 0.00 0.00 0.00 2.24
1012 1961 8.008513 AGAACACACGAGGTATATATTGAGTT 57.991 34.615 0.00 0.00 0.00 3.01
1017 1969 6.208994 GGAGGAGAACACACGAGGTATATATT 59.791 42.308 0.00 0.00 0.00 1.28
1024 1976 1.524863 CGGAGGAGAACACACGAGGT 61.525 60.000 0.00 0.00 0.00 3.85
1056 2008 1.067250 CTTGTGTTTTGGTGCCCCG 59.933 57.895 0.00 0.00 0.00 5.73
1058 2010 1.036707 TAGCTTGTGTTTTGGTGCCC 58.963 50.000 0.00 0.00 0.00 5.36
1074 2027 1.788308 TGAACTTTGCACGTACGTAGC 59.212 47.619 22.34 24.46 0.00 3.58
1102 2055 3.006940 GTGTGGTGTCTGTCAACTCAAA 58.993 45.455 0.00 0.00 38.66 2.69
1224 2177 1.854939 TCCTCCTCCCCATACTCGTAA 59.145 52.381 0.00 0.00 0.00 3.18
1335 2288 1.781786 ACTGTAGGATGACCAGCGAT 58.218 50.000 0.00 0.00 38.94 4.58
1477 2441 4.717233 ATCTCAAAGCACACAAACACAA 57.283 36.364 0.00 0.00 0.00 3.33
1478 2442 4.082300 ACAATCTCAAAGCACACAAACACA 60.082 37.500 0.00 0.00 0.00 3.72
1504 2468 4.175489 CGCCGGTCAGACGATCGT 62.175 66.667 22.97 22.97 44.58 3.73
1598 2562 1.971695 GCCTGTTTGTTCCCCTCCG 60.972 63.158 0.00 0.00 0.00 4.63
1693 2657 1.594293 CGATGTCCACATACCCGGC 60.594 63.158 0.00 0.00 36.57 6.13
1779 2743 3.071206 AGGAGCGGCATCGTGACT 61.071 61.111 1.45 0.00 38.89 3.41
1824 2788 4.980805 GCAACCACCGCGTCCAGA 62.981 66.667 4.92 0.00 0.00 3.86
1866 2830 1.256812 TCGTGATGAAGAGCTCCACA 58.743 50.000 10.93 11.46 0.00 4.17
1906 2870 4.043200 GTTTGCTGTGGCGGCCTC 62.043 66.667 21.46 17.55 42.25 4.70
1908 2872 1.595093 ATTAGTTTGCTGTGGCGGCC 61.595 55.000 13.32 13.32 42.25 6.13
1909 2873 0.243636 AATTAGTTTGCTGTGGCGGC 59.756 50.000 0.00 0.00 42.25 6.53
1910 2874 3.006940 TCTAATTAGTTTGCTGTGGCGG 58.993 45.455 12.19 0.00 42.25 6.13
1911 2875 4.678509 TTCTAATTAGTTTGCTGTGGCG 57.321 40.909 12.19 0.00 42.25 5.69
1912 2876 6.677913 TCTTTTCTAATTAGTTTGCTGTGGC 58.322 36.000 12.19 0.00 39.26 5.01
1969 2933 6.063404 TCCGGGTCCAATAAATAATGGTAAC 58.937 40.000 0.00 0.00 37.94 2.50
1970 2934 6.263412 TCCGGGTCCAATAAATAATGGTAA 57.737 37.500 0.00 0.00 37.94 2.85
1971 2935 5.908562 TCCGGGTCCAATAAATAATGGTA 57.091 39.130 0.00 0.00 37.94 3.25
1972 2936 4.799715 TCCGGGTCCAATAAATAATGGT 57.200 40.909 0.00 0.00 37.94 3.55
1973 2937 6.152154 GGTTATCCGGGTCCAATAAATAATGG 59.848 42.308 0.00 0.00 38.09 3.16
1974 2938 6.717540 TGGTTATCCGGGTCCAATAAATAATG 59.282 38.462 0.00 0.00 36.30 1.90
1975 2939 6.854578 TGGTTATCCGGGTCCAATAAATAAT 58.145 36.000 0.00 0.00 36.30 1.28
1976 2940 6.263412 TGGTTATCCGGGTCCAATAAATAA 57.737 37.500 0.00 0.00 36.30 1.40
1977 2941 5.908562 TGGTTATCCGGGTCCAATAAATA 57.091 39.130 0.00 0.00 36.30 1.40
1978 2942 4.799715 TGGTTATCCGGGTCCAATAAAT 57.200 40.909 0.00 0.00 36.30 1.40
1979 2943 4.587976 TTGGTTATCCGGGTCCAATAAA 57.412 40.909 3.75 0.00 35.42 1.40
1980 2944 4.587976 TTTGGTTATCCGGGTCCAATAA 57.412 40.909 8.61 0.00 39.27 1.40
1981 2945 4.587976 TTTTGGTTATCCGGGTCCAATA 57.412 40.909 8.61 1.82 39.27 1.90
1982 2946 3.459710 TTTTGGTTATCCGGGTCCAAT 57.540 42.857 8.61 0.00 39.27 3.16
1983 2947 2.973983 TTTTGGTTATCCGGGTCCAA 57.026 45.000 3.75 3.75 38.04 3.53
1984 2948 2.973983 TTTTTGGTTATCCGGGTCCA 57.026 45.000 0.00 0.00 36.30 4.02
1985 2949 6.474140 AATTATTTTTGGTTATCCGGGTCC 57.526 37.500 0.00 0.00 36.30 4.46
1986 2950 7.548967 TCAAATTATTTTTGGTTATCCGGGTC 58.451 34.615 0.00 0.00 36.30 4.46
1987 2951 7.483580 TCAAATTATTTTTGGTTATCCGGGT 57.516 32.000 0.00 0.00 36.30 5.28
2002 2966 8.237811 ACCCATCTTCGCTTTATCAAATTATT 57.762 30.769 0.00 0.00 0.00 1.40
2011 2975 2.438021 TGCCTACCCATCTTCGCTTTAT 59.562 45.455 0.00 0.00 0.00 1.40
2031 2995 2.975851 GCGAAAACAACATTGAGAGCTG 59.024 45.455 0.00 0.00 0.00 4.24
2039 3003 4.218200 TCATCTGATGGCGAAAACAACATT 59.782 37.500 17.06 0.00 0.00 2.71
2050 3014 5.523552 TGTTGTATAGTTTCATCTGATGGCG 59.476 40.000 17.06 0.00 0.00 5.69
2053 3017 7.765819 TGAGGTGTTGTATAGTTTCATCTGATG 59.234 37.037 11.42 11.42 0.00 3.07
2055 3019 7.239763 TGAGGTGTTGTATAGTTTCATCTGA 57.760 36.000 0.00 0.00 0.00 3.27
2079 3044 2.167693 TGGCTAACGGACAATCGAGAAT 59.832 45.455 0.00 0.00 0.00 2.40
2153 3118 7.825270 AGTCATGTCCCAAATAACGTGTTAATA 59.175 33.333 0.00 0.00 34.66 0.98
2177 3142 8.462016 GCAATATTTGACTCCACTTCATTTAGT 58.538 33.333 0.00 0.00 0.00 2.24
2185 3150 3.950397 TCCGCAATATTTGACTCCACTT 58.050 40.909 0.00 0.00 0.00 3.16
2192 3157 5.851177 CCGAATATGTTCCGCAATATTTGAC 59.149 40.000 0.00 0.00 0.00 3.18
2206 3171 5.466728 GCGCATATCCATATCCGAATATGTT 59.533 40.000 0.30 0.00 42.15 2.71
2220 3185 2.503331 CCCAAATAGTGCGCATATCCA 58.497 47.619 15.91 0.00 0.00 3.41
2238 3203 1.699634 TCTGCAGTTCCATATAGCCCC 59.300 52.381 14.67 0.00 0.00 5.80
2312 3277 1.751351 CGGATCCAAGCAGTGACTCTA 59.249 52.381 13.41 0.00 0.00 2.43
2317 3282 1.831106 ACATACGGATCCAAGCAGTGA 59.169 47.619 13.41 0.00 0.00 3.41
2360 3325 2.137523 GTAACCGAAAGCTCCGTGAAA 58.862 47.619 7.54 0.00 0.00 2.69
2362 3327 0.963962 AGTAACCGAAAGCTCCGTGA 59.036 50.000 7.54 0.00 0.00 4.35
2365 3330 1.683790 CGCAGTAACCGAAAGCTCCG 61.684 60.000 0.00 0.00 0.00 4.63
2383 3348 1.278637 GTCTTCCAACGGTTGCACG 59.721 57.895 15.31 0.00 40.31 5.34
2420 3385 2.673368 AGCTCGTCATCCAAATCGTTTC 59.327 45.455 0.00 0.00 0.00 2.78
2423 3388 3.520290 TTAGCTCGTCATCCAAATCGT 57.480 42.857 0.00 0.00 0.00 3.73
2435 3400 3.068307 CACCTAGCCTGTTATTAGCTCGT 59.932 47.826 0.00 0.00 38.06 4.18
2447 3412 4.579869 ACAATGACTAAACACCTAGCCTG 58.420 43.478 0.00 0.00 0.00 4.85
2490 3457 5.990120 AAAGATAAAAAGATGCCACAGCT 57.010 34.783 0.00 0.00 40.80 4.24
2564 3542 9.134734 CATGCAATTTATTAACCAAAAGTACGT 57.865 29.630 0.00 0.00 0.00 3.57
2646 3624 9.812347 TGATGCATATCTAGGTCCAATAATTTT 57.188 29.630 0.00 0.00 34.31 1.82
2647 3625 9.458727 CTGATGCATATCTAGGTCCAATAATTT 57.541 33.333 0.00 0.00 34.31 1.82
2648 3626 8.829746 TCTGATGCATATCTAGGTCCAATAATT 58.170 33.333 0.00 0.00 34.31 1.40
2649 3627 8.384693 TCTGATGCATATCTAGGTCCAATAAT 57.615 34.615 0.00 0.00 34.31 1.28
2650 3628 7.797121 TCTGATGCATATCTAGGTCCAATAA 57.203 36.000 0.00 0.00 34.31 1.40
2651 3629 7.455953 ACTTCTGATGCATATCTAGGTCCAATA 59.544 37.037 0.00 0.00 34.31 1.90
2652 3630 6.271857 ACTTCTGATGCATATCTAGGTCCAAT 59.728 38.462 0.00 0.00 34.31 3.16
2653 3631 5.604231 ACTTCTGATGCATATCTAGGTCCAA 59.396 40.000 0.00 0.00 34.31 3.53
2654 3632 5.150715 ACTTCTGATGCATATCTAGGTCCA 58.849 41.667 0.00 0.00 34.31 4.02
2655 3633 5.736951 ACTTCTGATGCATATCTAGGTCC 57.263 43.478 0.00 0.00 34.31 4.46
2656 3634 8.116651 TCTAACTTCTGATGCATATCTAGGTC 57.883 38.462 0.00 0.00 34.31 3.85
2657 3635 8.663209 ATCTAACTTCTGATGCATATCTAGGT 57.337 34.615 0.00 0.00 34.31 3.08
2658 3636 9.941325 AAATCTAACTTCTGATGCATATCTAGG 57.059 33.333 0.00 0.00 34.31 3.02
2664 3642 8.840321 GCCTAAAAATCTAACTTCTGATGCATA 58.160 33.333 0.00 0.00 0.00 3.14
2665 3643 7.340232 TGCCTAAAAATCTAACTTCTGATGCAT 59.660 33.333 0.00 0.00 0.00 3.96
2666 3644 6.658816 TGCCTAAAAATCTAACTTCTGATGCA 59.341 34.615 0.00 0.00 0.00 3.96
2667 3645 7.088589 TGCCTAAAAATCTAACTTCTGATGC 57.911 36.000 0.00 0.00 0.00 3.91
2668 3646 8.273780 ACTGCCTAAAAATCTAACTTCTGATG 57.726 34.615 0.00 0.00 0.00 3.07
2669 3647 8.870075 AACTGCCTAAAAATCTAACTTCTGAT 57.130 30.769 0.00 0.00 0.00 2.90
2670 3648 7.117812 CGAACTGCCTAAAAATCTAACTTCTGA 59.882 37.037 0.00 0.00 0.00 3.27
2671 3649 7.095187 ACGAACTGCCTAAAAATCTAACTTCTG 60.095 37.037 0.00 0.00 0.00 3.02
2672 3650 6.935208 ACGAACTGCCTAAAAATCTAACTTCT 59.065 34.615 0.00 0.00 0.00 2.85
2673 3651 7.130303 ACGAACTGCCTAAAAATCTAACTTC 57.870 36.000 0.00 0.00 0.00 3.01
2674 3652 7.333672 CCTACGAACTGCCTAAAAATCTAACTT 59.666 37.037 0.00 0.00 0.00 2.66
2675 3653 6.817140 CCTACGAACTGCCTAAAAATCTAACT 59.183 38.462 0.00 0.00 0.00 2.24
2676 3654 6.815142 TCCTACGAACTGCCTAAAAATCTAAC 59.185 38.462 0.00 0.00 0.00 2.34
2677 3655 6.938507 TCCTACGAACTGCCTAAAAATCTAA 58.061 36.000 0.00 0.00 0.00 2.10
2678 3656 6.534475 TCCTACGAACTGCCTAAAAATCTA 57.466 37.500 0.00 0.00 0.00 1.98
2679 3657 5.416271 TCCTACGAACTGCCTAAAAATCT 57.584 39.130 0.00 0.00 0.00 2.40
2680 3658 5.585047 ACATCCTACGAACTGCCTAAAAATC 59.415 40.000 0.00 0.00 0.00 2.17
2681 3659 5.497474 ACATCCTACGAACTGCCTAAAAAT 58.503 37.500 0.00 0.00 0.00 1.82
2682 3660 4.901868 ACATCCTACGAACTGCCTAAAAA 58.098 39.130 0.00 0.00 0.00 1.94
2683 3661 4.546829 ACATCCTACGAACTGCCTAAAA 57.453 40.909 0.00 0.00 0.00 1.52
2684 3662 4.546829 AACATCCTACGAACTGCCTAAA 57.453 40.909 0.00 0.00 0.00 1.85
2685 3663 5.221382 GGATAACATCCTACGAACTGCCTAA 60.221 44.000 0.00 0.00 46.19 2.69
2686 3664 4.280174 GGATAACATCCTACGAACTGCCTA 59.720 45.833 0.00 0.00 46.19 3.93
2687 3665 3.069729 GGATAACATCCTACGAACTGCCT 59.930 47.826 0.00 0.00 46.19 4.75
2688 3666 3.391049 GGATAACATCCTACGAACTGCC 58.609 50.000 0.00 0.00 46.19 4.85
2700 3678 2.832129 TGGCGGAGATAGGGATAACATC 59.168 50.000 0.00 0.00 0.00 3.06
2701 3679 2.902608 TGGCGGAGATAGGGATAACAT 58.097 47.619 0.00 0.00 0.00 2.71
2702 3680 2.391926 TGGCGGAGATAGGGATAACA 57.608 50.000 0.00 0.00 0.00 2.41
2703 3681 3.764237 TTTGGCGGAGATAGGGATAAC 57.236 47.619 0.00 0.00 0.00 1.89
2704 3682 3.056107 CGATTTGGCGGAGATAGGGATAA 60.056 47.826 0.00 0.00 0.00 1.75
2705 3683 2.496070 CGATTTGGCGGAGATAGGGATA 59.504 50.000 0.00 0.00 0.00 2.59
2706 3684 1.276421 CGATTTGGCGGAGATAGGGAT 59.724 52.381 0.00 0.00 0.00 3.85
2707 3685 0.679505 CGATTTGGCGGAGATAGGGA 59.320 55.000 0.00 0.00 0.00 4.20
2708 3686 0.951040 GCGATTTGGCGGAGATAGGG 60.951 60.000 0.00 0.00 0.00 3.53
2709 3687 0.951040 GGCGATTTGGCGGAGATAGG 60.951 60.000 0.00 0.00 0.00 2.57
2710 3688 2.533318 GGCGATTTGGCGGAGATAG 58.467 57.895 0.00 0.00 0.00 2.08
2711 3689 4.771127 GGCGATTTGGCGGAGATA 57.229 55.556 0.00 0.00 0.00 1.98
2718 3696 1.427819 CACTTACCGGCGATTTGGC 59.572 57.895 9.30 0.00 40.44 4.52
2719 3697 0.391927 TCCACTTACCGGCGATTTGG 60.392 55.000 9.30 7.56 0.00 3.28
2720 3698 1.444836 TTCCACTTACCGGCGATTTG 58.555 50.000 9.30 0.00 0.00 2.32
2721 3699 1.808343 GTTTCCACTTACCGGCGATTT 59.192 47.619 9.30 0.00 0.00 2.17
2722 3700 1.445871 GTTTCCACTTACCGGCGATT 58.554 50.000 9.30 0.00 0.00 3.34
2723 3701 0.738412 CGTTTCCACTTACCGGCGAT 60.738 55.000 9.30 0.00 0.00 4.58
2724 3702 1.373246 CGTTTCCACTTACCGGCGA 60.373 57.895 9.30 0.00 0.00 5.54
2725 3703 0.945265 TTCGTTTCCACTTACCGGCG 60.945 55.000 0.00 0.00 0.00 6.46
2726 3704 1.069703 GTTTCGTTTCCACTTACCGGC 60.070 52.381 0.00 0.00 0.00 6.13
2727 3705 2.222445 CAGTTTCGTTTCCACTTACCGG 59.778 50.000 0.00 0.00 0.00 5.28
2728 3706 2.349155 GCAGTTTCGTTTCCACTTACCG 60.349 50.000 0.00 0.00 0.00 4.02
2729 3707 2.876550 AGCAGTTTCGTTTCCACTTACC 59.123 45.455 0.00 0.00 0.00 2.85
2730 3708 3.059120 GGAGCAGTTTCGTTTCCACTTAC 60.059 47.826 0.00 0.00 0.00 2.34
2731 3709 3.135994 GGAGCAGTTTCGTTTCCACTTA 58.864 45.455 0.00 0.00 0.00 2.24
2732 3710 1.947456 GGAGCAGTTTCGTTTCCACTT 59.053 47.619 0.00 0.00 0.00 3.16
2733 3711 1.134220 TGGAGCAGTTTCGTTTCCACT 60.134 47.619 0.00 0.00 33.21 4.00
2734 3712 1.305201 TGGAGCAGTTTCGTTTCCAC 58.695 50.000 0.00 0.00 33.21 4.02
2735 3713 1.305201 GTGGAGCAGTTTCGTTTCCA 58.695 50.000 0.00 0.00 35.67 3.53
2736 3714 1.264288 CTGTGGAGCAGTTTCGTTTCC 59.736 52.381 0.00 0.00 40.27 3.13
2737 3715 2.032808 GTCTGTGGAGCAGTTTCGTTTC 60.033 50.000 0.00 0.00 45.23 2.78
2738 3716 1.940613 GTCTGTGGAGCAGTTTCGTTT 59.059 47.619 0.00 0.00 45.23 3.60
2739 3717 1.583054 GTCTGTGGAGCAGTTTCGTT 58.417 50.000 0.00 0.00 45.23 3.85
2740 3718 0.597637 CGTCTGTGGAGCAGTTTCGT 60.598 55.000 0.00 0.00 45.23 3.85
2741 3719 0.318699 TCGTCTGTGGAGCAGTTTCG 60.319 55.000 0.00 0.00 45.23 3.46
2742 3720 1.728971 CATCGTCTGTGGAGCAGTTTC 59.271 52.381 0.00 0.00 45.23 2.78
2743 3721 1.070758 ACATCGTCTGTGGAGCAGTTT 59.929 47.619 0.00 0.00 45.23 2.66
2744 3722 0.681733 ACATCGTCTGTGGAGCAGTT 59.318 50.000 0.00 0.00 45.23 3.16
2745 3723 0.681733 AACATCGTCTGTGGAGCAGT 59.318 50.000 0.00 0.00 45.23 4.40
2746 3724 1.728971 GAAACATCGTCTGTGGAGCAG 59.271 52.381 0.00 0.00 46.34 4.24
2747 3725 1.344438 AGAAACATCGTCTGTGGAGCA 59.656 47.619 0.00 0.00 38.39 4.26
2748 3726 1.728971 CAGAAACATCGTCTGTGGAGC 59.271 52.381 0.00 0.00 38.39 4.70
2749 3727 1.728971 GCAGAAACATCGTCTGTGGAG 59.271 52.381 3.58 0.00 43.71 3.86
2750 3728 1.608025 GGCAGAAACATCGTCTGTGGA 60.608 52.381 3.58 0.00 43.71 4.02
2751 3729 0.798776 GGCAGAAACATCGTCTGTGG 59.201 55.000 3.58 0.00 43.71 4.17
2752 3730 0.798776 GGGCAGAAACATCGTCTGTG 59.201 55.000 3.58 0.00 43.71 3.66
2753 3731 0.670546 CGGGCAGAAACATCGTCTGT 60.671 55.000 3.58 0.00 43.71 3.41
2754 3732 0.389817 TCGGGCAGAAACATCGTCTG 60.390 55.000 0.00 0.00 44.48 3.51
2755 3733 0.389948 GTCGGGCAGAAACATCGTCT 60.390 55.000 0.00 0.00 0.00 4.18
2756 3734 1.359459 GGTCGGGCAGAAACATCGTC 61.359 60.000 0.00 0.00 0.00 4.20
2757 3735 1.375523 GGTCGGGCAGAAACATCGT 60.376 57.895 0.00 0.00 0.00 3.73
2758 3736 0.174845 TAGGTCGGGCAGAAACATCG 59.825 55.000 0.00 0.00 0.00 3.84
2759 3737 2.213499 CATAGGTCGGGCAGAAACATC 58.787 52.381 0.00 0.00 0.00 3.06
2760 3738 1.747206 GCATAGGTCGGGCAGAAACAT 60.747 52.381 0.00 0.00 0.00 2.71
2761 3739 0.392461 GCATAGGTCGGGCAGAAACA 60.392 55.000 0.00 0.00 0.00 2.83
2762 3740 0.392461 TGCATAGGTCGGGCAGAAAC 60.392 55.000 0.00 0.00 32.95 2.78
2763 3741 0.392461 GTGCATAGGTCGGGCAGAAA 60.392 55.000 0.00 0.00 38.38 2.52
2764 3742 1.220749 GTGCATAGGTCGGGCAGAA 59.779 57.895 0.00 0.00 38.38 3.02
2765 3743 2.900273 GTGCATAGGTCGGGCAGA 59.100 61.111 0.00 0.00 38.38 4.26
2766 3744 2.586079 CGTGCATAGGTCGGGCAG 60.586 66.667 0.00 0.00 38.38 4.85
2767 3745 3.071837 TCGTGCATAGGTCGGGCA 61.072 61.111 0.00 0.00 34.70 5.36
2768 3746 2.585247 GTCGTGCATAGGTCGGGC 60.585 66.667 0.00 0.00 0.00 6.13
2769 3747 2.106332 GGTCGTGCATAGGTCGGG 59.894 66.667 0.00 0.00 0.00 5.14
2770 3748 1.226974 CAGGTCGTGCATAGGTCGG 60.227 63.158 0.00 0.00 0.00 4.79
2771 3749 0.172578 TTCAGGTCGTGCATAGGTCG 59.827 55.000 0.00 0.00 0.00 4.79
2772 3750 2.380084 TTTCAGGTCGTGCATAGGTC 57.620 50.000 0.00 0.00 0.00 3.85
2773 3751 2.851263 TTTTCAGGTCGTGCATAGGT 57.149 45.000 0.00 0.00 0.00 3.08
2774 3752 2.614057 GGATTTTCAGGTCGTGCATAGG 59.386 50.000 0.00 0.00 0.00 2.57
2775 3753 3.270027 TGGATTTTCAGGTCGTGCATAG 58.730 45.455 0.00 0.00 0.00 2.23
2776 3754 3.270027 CTGGATTTTCAGGTCGTGCATA 58.730 45.455 0.00 0.00 0.00 3.14
2777 3755 2.086869 CTGGATTTTCAGGTCGTGCAT 58.913 47.619 0.00 0.00 0.00 3.96
2778 3756 1.522668 CTGGATTTTCAGGTCGTGCA 58.477 50.000 0.00 0.00 0.00 4.57
2779 3757 0.169009 GCTGGATTTTCAGGTCGTGC 59.831 55.000 0.00 0.00 35.43 5.34
2780 3758 0.443869 CGCTGGATTTTCAGGTCGTG 59.556 55.000 0.00 0.00 35.43 4.35
2781 3759 0.673644 CCGCTGGATTTTCAGGTCGT 60.674 55.000 0.00 0.00 35.43 4.34
2782 3760 1.982073 GCCGCTGGATTTTCAGGTCG 61.982 60.000 0.00 0.00 35.43 4.79
2783 3761 1.657751 GGCCGCTGGATTTTCAGGTC 61.658 60.000 0.00 0.00 35.43 3.85
2784 3762 1.678970 GGCCGCTGGATTTTCAGGT 60.679 57.895 0.00 0.00 35.43 4.00
2785 3763 2.764314 CGGCCGCTGGATTTTCAGG 61.764 63.158 14.67 0.00 35.43 3.86
2786 3764 2.764314 CCGGCCGCTGGATTTTCAG 61.764 63.158 22.85 0.00 37.79 3.02
2787 3765 2.186602 TACCGGCCGCTGGATTTTCA 62.187 55.000 25.65 0.00 33.36 2.69
2788 3766 1.450669 TACCGGCCGCTGGATTTTC 60.451 57.895 25.65 0.00 33.36 2.29
2789 3767 1.747745 GTACCGGCCGCTGGATTTT 60.748 57.895 25.65 4.70 33.36 1.82
2790 3768 2.124860 GTACCGGCCGCTGGATTT 60.125 61.111 25.65 5.10 33.36 2.17
2791 3769 4.171103 GGTACCGGCCGCTGGATT 62.171 66.667 25.65 5.88 33.36 3.01
2804 3782 0.868406 GCGCATGATAAGCAGGGTAC 59.132 55.000 0.30 0.00 0.00 3.34
2805 3783 0.467804 TGCGCATGATAAGCAGGGTA 59.532 50.000 5.66 0.00 35.81 3.69
2806 3784 0.179009 ATGCGCATGATAAGCAGGGT 60.179 50.000 24.69 0.00 44.55 4.34
2807 3785 0.240145 CATGCGCATGATAAGCAGGG 59.760 55.000 40.62 13.37 44.55 4.45
2808 3786 0.949397 ACATGCGCATGATAAGCAGG 59.051 50.000 46.90 24.15 46.43 4.85
2809 3787 2.647337 GAACATGCGCATGATAAGCAG 58.353 47.619 46.90 24.84 44.55 4.24
2810 3788 1.003652 CGAACATGCGCATGATAAGCA 60.004 47.619 46.90 9.29 45.46 3.91
2811 3789 1.661178 CCGAACATGCGCATGATAAGC 60.661 52.381 46.90 29.77 41.20 3.09
2812 3790 1.599071 ACCGAACATGCGCATGATAAG 59.401 47.619 46.90 33.78 41.20 1.73
2813 3791 1.662517 ACCGAACATGCGCATGATAA 58.337 45.000 46.90 11.83 41.20 1.75
2814 3792 1.330213 CAACCGAACATGCGCATGATA 59.670 47.619 46.90 12.68 41.20 2.15
2815 3793 0.099259 CAACCGAACATGCGCATGAT 59.901 50.000 46.90 39.08 41.20 2.45
2816 3794 1.501292 CAACCGAACATGCGCATGA 59.499 52.632 46.90 13.55 41.20 3.07
2817 3795 1.514657 CCAACCGAACATGCGCATG 60.515 57.895 41.02 41.02 44.15 4.06
2818 3796 1.031571 ATCCAACCGAACATGCGCAT 61.032 50.000 19.28 19.28 0.00 4.73
2819 3797 1.240641 AATCCAACCGAACATGCGCA 61.241 50.000 14.96 14.96 0.00 6.09
2820 3798 0.109319 AAATCCAACCGAACATGCGC 60.109 50.000 0.00 0.00 0.00 6.09
2821 3799 3.181501 ACATAAATCCAACCGAACATGCG 60.182 43.478 0.00 0.00 0.00 4.73
2822 3800 4.104776 CACATAAATCCAACCGAACATGC 58.895 43.478 0.00 0.00 0.00 4.06
2823 3801 5.309323 ACACATAAATCCAACCGAACATG 57.691 39.130 0.00 0.00 0.00 3.21
2824 3802 4.094294 CGACACATAAATCCAACCGAACAT 59.906 41.667 0.00 0.00 0.00 2.71
2825 3803 3.433957 CGACACATAAATCCAACCGAACA 59.566 43.478 0.00 0.00 0.00 3.18
2826 3804 3.434299 ACGACACATAAATCCAACCGAAC 59.566 43.478 0.00 0.00 0.00 3.95
2827 3805 3.433957 CACGACACATAAATCCAACCGAA 59.566 43.478 0.00 0.00 0.00 4.30
2828 3806 2.997303 CACGACACATAAATCCAACCGA 59.003 45.455 0.00 0.00 0.00 4.69
2829 3807 2.739913 ACACGACACATAAATCCAACCG 59.260 45.455 0.00 0.00 0.00 4.44
2830 3808 3.500680 ACACACGACACATAAATCCAACC 59.499 43.478 0.00 0.00 0.00 3.77
2831 3809 4.463209 CACACACGACACATAAATCCAAC 58.537 43.478 0.00 0.00 0.00 3.77
2832 3810 3.058570 GCACACACGACACATAAATCCAA 60.059 43.478 0.00 0.00 0.00 3.53
2833 3811 2.482336 GCACACACGACACATAAATCCA 59.518 45.455 0.00 0.00 0.00 3.41
2834 3812 2.482336 TGCACACACGACACATAAATCC 59.518 45.455 0.00 0.00 0.00 3.01
2835 3813 3.804518 TGCACACACGACACATAAATC 57.195 42.857 0.00 0.00 0.00 2.17
2836 3814 3.181521 CGATGCACACACGACACATAAAT 60.182 43.478 0.00 0.00 0.00 1.40
2837 3815 2.156697 CGATGCACACACGACACATAAA 59.843 45.455 0.00 0.00 0.00 1.40
2838 3816 1.724082 CGATGCACACACGACACATAA 59.276 47.619 0.00 0.00 0.00 1.90
2839 3817 1.336424 ACGATGCACACACGACACATA 60.336 47.619 10.44 0.00 0.00 2.29
2840 3818 0.599991 ACGATGCACACACGACACAT 60.600 50.000 10.44 0.00 0.00 3.21
2841 3819 1.212455 GACGATGCACACACGACACA 61.212 55.000 10.44 0.00 0.00 3.72
2842 3820 0.939577 AGACGATGCACACACGACAC 60.940 55.000 10.44 3.58 0.00 3.67
2843 3821 0.939106 CAGACGATGCACACACGACA 60.939 55.000 10.44 0.00 0.00 4.35
2844 3822 0.663269 TCAGACGATGCACACACGAC 60.663 55.000 10.44 5.45 0.00 4.34
2845 3823 0.031449 TTCAGACGATGCACACACGA 59.969 50.000 10.44 0.00 0.00 4.35
2846 3824 1.070821 ATTCAGACGATGCACACACG 58.929 50.000 0.00 0.00 0.00 4.49
2847 3825 2.224079 ACAATTCAGACGATGCACACAC 59.776 45.455 0.00 0.00 0.00 3.82
2848 3826 2.223845 CACAATTCAGACGATGCACACA 59.776 45.455 0.00 0.00 0.00 3.72
2849 3827 2.224079 ACACAATTCAGACGATGCACAC 59.776 45.455 0.00 0.00 0.00 3.82
2850 3828 2.480037 GACACAATTCAGACGATGCACA 59.520 45.455 0.00 0.00 0.00 4.57
2851 3829 2.472886 CGACACAATTCAGACGATGCAC 60.473 50.000 0.00 0.00 0.00 4.57
2852 3830 1.726248 CGACACAATTCAGACGATGCA 59.274 47.619 0.00 0.00 0.00 3.96
2853 3831 1.726791 ACGACACAATTCAGACGATGC 59.273 47.619 0.00 0.00 0.00 3.91
2854 3832 2.345641 GGACGACACAATTCAGACGATG 59.654 50.000 0.00 0.00 0.00 3.84
2855 3833 2.607187 GGACGACACAATTCAGACGAT 58.393 47.619 0.00 0.00 0.00 3.73
2856 3834 1.664874 CGGACGACACAATTCAGACGA 60.665 52.381 0.00 0.00 0.00 4.20
2857 3835 0.708370 CGGACGACACAATTCAGACG 59.292 55.000 0.00 0.00 0.00 4.18
2858 3836 0.438830 GCGGACGACACAATTCAGAC 59.561 55.000 0.00 0.00 0.00 3.51
2859 3837 0.032815 TGCGGACGACACAATTCAGA 59.967 50.000 0.00 0.00 0.00 3.27
2860 3838 1.078709 ATGCGGACGACACAATTCAG 58.921 50.000 0.00 0.00 0.00 3.02
2861 3839 2.267426 CTATGCGGACGACACAATTCA 58.733 47.619 0.00 0.00 0.00 2.57
2862 3840 1.004927 GCTATGCGGACGACACAATTC 60.005 52.381 0.00 0.00 0.00 2.17
2863 3841 1.006832 GCTATGCGGACGACACAATT 58.993 50.000 0.00 0.00 0.00 2.32
2864 3842 0.108377 TGCTATGCGGACGACACAAT 60.108 50.000 0.00 0.00 0.00 2.71
2865 3843 1.011968 GTGCTATGCGGACGACACAA 61.012 55.000 0.00 0.00 0.00 3.33
2866 3844 1.445410 GTGCTATGCGGACGACACA 60.445 57.895 0.00 0.00 0.00 3.72
2867 3845 1.153823 AGTGCTATGCGGACGACAC 60.154 57.895 0.00 0.00 39.22 3.67
2868 3846 1.153842 CAGTGCTATGCGGACGACA 60.154 57.895 0.00 0.00 39.22 4.35
2869 3847 2.517450 GCAGTGCTATGCGGACGAC 61.517 63.158 8.18 0.00 39.22 4.34
2870 3848 2.202743 GCAGTGCTATGCGGACGA 60.203 61.111 8.18 0.00 39.22 4.20
2883 3861 0.550914 TGGGTTTCCACTTCAGCAGT 59.449 50.000 0.00 0.00 38.32 4.40
2884 3862 1.242076 CTGGGTTTCCACTTCAGCAG 58.758 55.000 0.00 0.00 38.32 4.24
2885 3863 0.178992 CCTGGGTTTCCACTTCAGCA 60.179 55.000 0.00 0.00 38.32 4.41
2886 3864 1.527433 GCCTGGGTTTCCACTTCAGC 61.527 60.000 0.00 0.00 38.32 4.26
2887 3865 0.178992 TGCCTGGGTTTCCACTTCAG 60.179 55.000 0.00 0.00 38.32 3.02
2888 3866 0.482446 ATGCCTGGGTTTCCACTTCA 59.518 50.000 0.00 0.00 38.32 3.02
2889 3867 2.507407 TATGCCTGGGTTTCCACTTC 57.493 50.000 0.00 0.00 38.32 3.01
2890 3868 2.110011 ACTTATGCCTGGGTTTCCACTT 59.890 45.455 0.00 0.00 38.32 3.16
2891 3869 1.710809 ACTTATGCCTGGGTTTCCACT 59.289 47.619 0.00 0.00 38.32 4.00
2892 3870 1.818674 CACTTATGCCTGGGTTTCCAC 59.181 52.381 0.00 0.00 38.32 4.02
2893 3871 1.890573 GCACTTATGCCTGGGTTTCCA 60.891 52.381 0.00 0.00 46.97 3.53
2894 3872 0.817654 GCACTTATGCCTGGGTTTCC 59.182 55.000 0.00 0.00 46.97 3.13
2905 3883 2.931969 TGAGATCGTGCTTGCACTTATG 59.068 45.455 21.17 7.87 0.00 1.90
2906 3884 3.251479 TGAGATCGTGCTTGCACTTAT 57.749 42.857 21.17 14.85 0.00 1.73
2907 3885 2.741759 TGAGATCGTGCTTGCACTTA 57.258 45.000 21.17 11.16 0.00 2.24
2908 3886 3.612517 TGAGATCGTGCTTGCACTT 57.387 47.368 21.17 10.27 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.