Multiple sequence alignment - TraesCS1D01G177400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G177400 chr1D 100.000 3458 0 0 1 3458 252530385 252526928 0.000000e+00 6386.0
1 TraesCS1D01G177400 chr1D 85.299 619 91 0 1690 2308 8713590 8714208 1.050000e-179 640.0
2 TraesCS1D01G177400 chr1D 86.250 400 55 0 1164 1563 8712948 8713347 5.300000e-118 435.0
3 TraesCS1D01G177400 chr1D 95.312 64 3 0 999 1062 8712802 8712865 6.110000e-18 102.0
4 TraesCS1D01G177400 chr1D 97.778 45 1 0 3413 3457 57124720 57124764 1.030000e-10 78.7
5 TraesCS1D01G177400 chr1B 95.326 2653 88 16 1 2634 360807077 360809712 0.000000e+00 4180.0
6 TraesCS1D01G177400 chr1B 85.460 619 90 0 1690 2308 11859025 11859643 0.000000e+00 645.0
7 TraesCS1D01G177400 chr1B 86.000 400 56 0 1164 1563 11858381 11858780 2.470000e-116 429.0
8 TraesCS1D01G177400 chr1B 80.597 402 78 0 1165 1566 492792191 492791790 9.320000e-81 311.0
9 TraesCS1D01G177400 chr1B 90.909 165 12 2 2695 2859 360809709 360809870 5.810000e-53 219.0
10 TraesCS1D01G177400 chr1A 94.311 2531 96 19 514 3014 323644282 323641770 0.000000e+00 3832.0
11 TraesCS1D01G177400 chr1A 85.945 619 87 0 1690 2308 10068030 10068648 0.000000e+00 662.0
12 TraesCS1D01G177400 chr1A 87.890 545 33 23 1 519 323645009 323644472 8.210000e-171 610.0
13 TraesCS1D01G177400 chr1A 87.250 400 51 0 1164 1563 10067342 10067741 1.130000e-124 457.0
14 TraesCS1D01G177400 chr1A 87.395 238 16 4 2998 3221 323634544 323634307 9.520000e-66 261.0
15 TraesCS1D01G177400 chr1A 93.750 64 4 0 999 1062 10067167 10067230 2.840000e-16 97.1
16 TraesCS1D01G177400 chr5B 84.355 620 95 2 1690 2308 680360028 680359410 1.060000e-169 606.0
17 TraesCS1D01G177400 chr5B 84.304 618 97 0 1690 2307 223984464 223983847 3.820000e-169 604.0
18 TraesCS1D01G177400 chr5D 84.304 618 97 0 1690 2307 210375308 210374691 3.820000e-169 604.0
19 TraesCS1D01G177400 chr5D 97.826 46 1 0 3412 3457 159093761 159093716 2.860000e-11 80.5
20 TraesCS1D01G177400 chr5A 84.142 618 98 0 1690 2307 272132567 272131950 1.780000e-167 599.0
21 TraesCS1D01G177400 chr5A 95.918 49 2 0 3409 3457 692751809 692751761 2.860000e-11 80.5
22 TraesCS1D01G177400 chr4B 83.668 398 65 0 1165 1562 39120609 39121006 3.260000e-100 375.0
23 TraesCS1D01G177400 chr7B 97.872 47 1 0 3411 3457 272520922 272520876 7.950000e-12 82.4
24 TraesCS1D01G177400 chr4A 97.826 46 1 0 3413 3458 27177835 27177880 2.860000e-11 80.5
25 TraesCS1D01G177400 chr6D 97.778 45 1 0 3413 3457 309921900 309921856 1.030000e-10 78.7
26 TraesCS1D01G177400 chr6A 97.778 45 1 0 3413 3457 268565870 268565826 1.030000e-10 78.7
27 TraesCS1D01G177400 chr3D 97.778 45 1 0 3413 3457 96641737 96641693 1.030000e-10 78.7
28 TraesCS1D01G177400 chr2D 97.778 45 1 0 3413 3457 600096026 600095982 1.030000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G177400 chr1D 252526928 252530385 3457 True 6386.000000 6386 100.000000 1 3458 1 chr1D.!!$R1 3457
1 TraesCS1D01G177400 chr1D 8712802 8714208 1406 False 392.333333 640 88.953667 999 2308 3 chr1D.!!$F2 1309
2 TraesCS1D01G177400 chr1B 360807077 360809870 2793 False 2199.500000 4180 93.117500 1 2859 2 chr1B.!!$F2 2858
3 TraesCS1D01G177400 chr1B 11858381 11859643 1262 False 537.000000 645 85.730000 1164 2308 2 chr1B.!!$F1 1144
4 TraesCS1D01G177400 chr1A 323641770 323645009 3239 True 2221.000000 3832 91.100500 1 3014 2 chr1A.!!$R2 3013
5 TraesCS1D01G177400 chr1A 10067167 10068648 1481 False 405.366667 662 88.981667 999 2308 3 chr1A.!!$F1 1309
6 TraesCS1D01G177400 chr5B 680359410 680360028 618 True 606.000000 606 84.355000 1690 2308 1 chr5B.!!$R2 618
7 TraesCS1D01G177400 chr5B 223983847 223984464 617 True 604.000000 604 84.304000 1690 2307 1 chr5B.!!$R1 617
8 TraesCS1D01G177400 chr5D 210374691 210375308 617 True 604.000000 604 84.304000 1690 2307 1 chr5D.!!$R2 617
9 TraesCS1D01G177400 chr5A 272131950 272132567 617 True 599.000000 599 84.142000 1690 2307 1 chr5A.!!$R1 617

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
156 158 0.680061 TGCGTGTGTATGTGGTGGTA 59.320 50.0 0.00 0.0 0.00 3.25 F
715 972 0.793861 TGGCGCTTTTCGATGTACAC 59.206 50.0 7.64 0.0 41.67 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1707 2190 3.425578 GTGACTGACACCATCTCCG 57.574 57.895 0.0 0.0 43.05 4.63 R
2699 3184 0.889994 TGCCAAGCAAAGCCATACAG 59.110 50.000 0.0 0.0 34.76 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 101 7.475840 GGCTAGTGGAAAAATCTGAGTATTTG 58.524 38.462 0.00 0.00 0.00 2.32
101 102 7.336931 GGCTAGTGGAAAAATCTGAGTATTTGA 59.663 37.037 0.00 0.00 0.00 2.69
102 103 8.178313 GCTAGTGGAAAAATCTGAGTATTTGAC 58.822 37.037 0.00 0.00 0.00 3.18
103 104 9.442047 CTAGTGGAAAAATCTGAGTATTTGACT 57.558 33.333 0.00 0.00 42.90 3.41
105 106 9.965902 AGTGGAAAAATCTGAGTATTTGACTAT 57.034 29.630 0.00 0.00 39.06 2.12
156 158 0.680061 TGCGTGTGTATGTGGTGGTA 59.320 50.000 0.00 0.00 0.00 3.25
237 261 9.485206 GTTTATGGAGTAGTAGTTCACAAAAGA 57.515 33.333 0.00 0.00 0.00 2.52
311 337 8.382875 GGCAAAAATAACATGTTTTCTATCTGC 58.617 33.333 17.78 15.55 31.50 4.26
392 428 3.990092 TGTTCACGACCATATATGCCTC 58.010 45.455 7.24 3.30 0.00 4.70
434 470 6.680810 TCAGAAAATGACCAATGCTTTGTAG 58.319 36.000 11.03 0.15 31.12 2.74
467 503 7.272084 GTCAGACAAATCATAAATTGTGCAGTC 59.728 37.037 0.00 0.00 39.73 3.51
499 535 3.127895 GTCGTTTTAGCCACCAATGCATA 59.872 43.478 0.00 0.00 0.00 3.14
562 793 4.819088 GCGTTAACCTACTAGGCTACTACT 59.181 45.833 1.55 0.00 39.63 2.57
616 847 4.023365 GCTTCAGAGTTCAGACAAGCATTT 60.023 41.667 0.00 0.00 36.94 2.32
657 889 9.793252 ATTTTCTTGAATGATGTATACTGTTGC 57.207 29.630 4.17 0.00 0.00 4.17
715 972 0.793861 TGGCGCTTTTCGATGTACAC 59.206 50.000 7.64 0.00 41.67 2.90
792 1049 6.286240 ACTGCTGTAAATGTATCTCAGTGA 57.714 37.500 0.00 0.00 32.96 3.41
879 1137 8.438676 AATATATTGCTGTCCTTGTAACTCAC 57.561 34.615 0.00 0.00 0.00 3.51
883 1141 2.870411 GCTGTCCTTGTAACTCACGTTT 59.130 45.455 0.00 0.00 34.59 3.60
885 1143 3.864243 TGTCCTTGTAACTCACGTTTGT 58.136 40.909 0.00 0.00 34.59 2.83
888 1146 4.093850 GTCCTTGTAACTCACGTTTGTGTT 59.906 41.667 0.00 0.00 46.49 3.32
898 1156 3.692101 TCACGTTTGTGTTGGAAGAACAT 59.308 39.130 0.00 0.00 46.49 2.71
904 1162 5.756195 TTGTGTTGGAAGAACATCTCTTG 57.244 39.130 0.00 0.00 44.82 3.02
922 1180 5.243060 TCTCTTGTTTCTTCGTATGGTCAGA 59.757 40.000 0.00 0.00 0.00 3.27
949 1208 8.409358 AATCTGTATTAGTTGGCAGTTTTTCT 57.591 30.769 0.00 0.00 0.00 2.52
961 1220 3.824443 GCAGTTTTTCTAGGCCCTGTTTA 59.176 43.478 0.00 0.00 0.00 2.01
1073 1332 7.467267 CGGAATGGTCAAGGTAATTGTGATTAG 60.467 40.741 0.00 0.00 40.05 1.73
1615 2009 6.141462 GCATATTCTCTTTTGCTGCTATGTC 58.859 40.000 0.00 0.00 32.41 3.06
1707 2190 6.486993 GGTCAATAGGTATTGTCTTGGATTCC 59.513 42.308 9.10 0.00 42.70 3.01
2370 2853 9.944376 ACTCATGCTACTATTTGAAAGTTTCTA 57.056 29.630 16.33 6.41 0.00 2.10
2462 2945 2.028567 ACAGGAAGTGCTTCTAGACAGC 60.029 50.000 15.74 15.74 39.45 4.40
2467 2950 6.121757 GGAAGTGCTTCTAGACAGCTGTCT 62.122 50.000 42.19 42.19 44.93 3.41
2638 3123 4.214437 CAACTTCATCGCTGTTTCAACTC 58.786 43.478 0.00 0.00 0.00 3.01
2639 3124 2.476619 ACTTCATCGCTGTTTCAACTCG 59.523 45.455 0.00 0.00 0.00 4.18
2640 3125 1.428448 TCATCGCTGTTTCAACTCGG 58.572 50.000 5.52 0.00 0.00 4.63
2641 3126 0.443869 CATCGCTGTTTCAACTCGGG 59.556 55.000 0.00 0.00 0.00 5.14
2642 3127 0.034896 ATCGCTGTTTCAACTCGGGT 59.965 50.000 0.00 0.00 0.00 5.28
2643 3128 0.599204 TCGCTGTTTCAACTCGGGTC 60.599 55.000 0.00 0.00 0.00 4.46
2644 3129 1.566018 CGCTGTTTCAACTCGGGTCC 61.566 60.000 0.00 0.00 0.00 4.46
2655 3140 2.202570 CGGGTCCGTTACTCGCTG 60.203 66.667 0.55 0.00 46.91 5.18
2657 3142 2.183555 GGTCCGTTACTCGCTGGG 59.816 66.667 0.00 0.00 38.35 4.45
2743 3228 0.886490 CAGCTTTGCGTCCCACTTCT 60.886 55.000 0.00 0.00 0.00 2.85
2744 3229 0.886490 AGCTTTGCGTCCCACTTCTG 60.886 55.000 0.00 0.00 0.00 3.02
2747 3232 0.179234 TTTGCGTCCCACTTCTGTCA 59.821 50.000 0.00 0.00 0.00 3.58
2748 3233 0.249868 TTGCGTCCCACTTCTGTCAG 60.250 55.000 0.00 0.00 0.00 3.51
2757 3242 2.224378 CCACTTCTGTCAGAGGCTTTGA 60.224 50.000 11.69 3.21 0.00 2.69
2793 3278 0.110823 CGGTGTAGTTTGCTTGCGAC 60.111 55.000 0.00 0.00 0.00 5.19
2798 3283 1.332375 GTAGTTTGCTTGCGACCAACA 59.668 47.619 0.00 0.00 0.00 3.33
2801 3286 2.159114 AGTTTGCTTGCGACCAACAATT 60.159 40.909 0.00 0.00 0.00 2.32
2846 3331 4.492604 TTTTTGCTGGACGGAGGG 57.507 55.556 0.00 0.00 0.00 4.30
2859 3344 1.964223 ACGGAGGGTGAGCATATACTG 59.036 52.381 0.00 0.00 0.00 2.74
2860 3345 1.964223 CGGAGGGTGAGCATATACTGT 59.036 52.381 0.00 0.00 0.00 3.55
2902 3387 0.739813 AGCACCGTATCGTCAAAGCC 60.740 55.000 0.00 0.00 0.00 4.35
2996 3482 3.003897 ACGGACGCTTTTCTTTTATGCAA 59.996 39.130 0.00 0.00 0.00 4.08
3015 3501 5.903764 GCAAGTTGCAACAATGTTATTCA 57.096 34.783 30.11 0.00 44.26 2.57
3016 3502 5.669122 GCAAGTTGCAACAATGTTATTCAC 58.331 37.500 30.11 10.68 44.26 3.18
3017 3503 5.233902 GCAAGTTGCAACAATGTTATTCACA 59.766 36.000 30.11 0.00 44.26 3.58
3018 3504 6.639212 CAAGTTGCAACAATGTTATTCACAC 58.361 36.000 30.11 0.00 38.61 3.82
3019 3505 5.900425 AGTTGCAACAATGTTATTCACACA 58.100 33.333 30.11 0.00 38.61 3.72
3020 3506 5.748152 AGTTGCAACAATGTTATTCACACAC 59.252 36.000 30.11 0.00 38.61 3.82
3021 3507 5.254339 TGCAACAATGTTATTCACACACA 57.746 34.783 0.00 0.00 38.61 3.72
3022 3508 5.840715 TGCAACAATGTTATTCACACACAT 58.159 33.333 0.00 0.00 38.61 3.21
3023 3509 6.974965 TGCAACAATGTTATTCACACACATA 58.025 32.000 0.00 0.00 38.61 2.29
3024 3510 6.860539 TGCAACAATGTTATTCACACACATAC 59.139 34.615 0.00 0.00 38.61 2.39
3025 3511 6.860539 GCAACAATGTTATTCACACACATACA 59.139 34.615 0.00 0.00 38.61 2.29
3026 3512 7.060979 GCAACAATGTTATTCACACACATACAG 59.939 37.037 0.00 0.00 38.61 2.74
3027 3513 7.144722 ACAATGTTATTCACACACATACAGG 57.855 36.000 0.00 0.00 38.61 4.00
3028 3514 6.939730 ACAATGTTATTCACACACATACAGGA 59.060 34.615 0.00 0.00 38.61 3.86
3029 3515 7.446931 ACAATGTTATTCACACACATACAGGAA 59.553 33.333 0.00 0.00 38.61 3.36
3030 3516 8.461222 CAATGTTATTCACACACATACAGGAAT 58.539 33.333 0.00 0.00 38.61 3.01
3031 3517 7.994425 TGTTATTCACACACATACAGGAATT 57.006 32.000 0.00 0.00 0.00 2.17
3032 3518 8.039603 TGTTATTCACACACATACAGGAATTC 57.960 34.615 0.00 0.00 0.00 2.17
3033 3519 7.663493 TGTTATTCACACACATACAGGAATTCA 59.337 33.333 7.93 0.00 0.00 2.57
3034 3520 8.677300 GTTATTCACACACATACAGGAATTCAT 58.323 33.333 7.93 0.00 0.00 2.57
3035 3521 9.898152 TTATTCACACACATACAGGAATTCATA 57.102 29.630 7.93 0.00 0.00 2.15
3036 3522 8.985315 ATTCACACACATACAGGAATTCATAT 57.015 30.769 7.93 0.00 0.00 1.78
3037 3523 8.806429 TTCACACACATACAGGAATTCATATT 57.194 30.769 7.93 0.00 0.00 1.28
3038 3524 8.437360 TCACACACATACAGGAATTCATATTC 57.563 34.615 7.93 0.00 39.57 1.75
3039 3525 7.224557 TCACACACATACAGGAATTCATATTCG 59.775 37.037 7.93 0.00 40.91 3.34
3040 3526 7.224557 CACACACATACAGGAATTCATATTCGA 59.775 37.037 7.93 0.00 40.91 3.71
3041 3527 7.439356 ACACACATACAGGAATTCATATTCGAG 59.561 37.037 7.93 0.00 40.91 4.04
3042 3528 6.931281 ACACATACAGGAATTCATATTCGAGG 59.069 38.462 7.93 0.00 40.91 4.63
3043 3529 7.154656 CACATACAGGAATTCATATTCGAGGA 58.845 38.462 7.93 0.00 40.91 3.71
3044 3530 7.657354 CACATACAGGAATTCATATTCGAGGAA 59.343 37.037 7.93 0.00 40.91 3.36
3045 3531 7.875041 ACATACAGGAATTCATATTCGAGGAAG 59.125 37.037 7.93 0.00 40.91 3.46
3046 3532 5.615289 ACAGGAATTCATATTCGAGGAAGG 58.385 41.667 7.93 0.00 40.91 3.46
3047 3533 5.366768 ACAGGAATTCATATTCGAGGAAGGA 59.633 40.000 7.93 0.00 40.91 3.36
3048 3534 6.126768 ACAGGAATTCATATTCGAGGAAGGAA 60.127 38.462 7.93 0.00 40.91 3.36
3049 3535 6.426328 CAGGAATTCATATTCGAGGAAGGAAG 59.574 42.308 7.93 0.00 40.91 3.46
3050 3536 5.703130 GGAATTCATATTCGAGGAAGGAAGG 59.297 44.000 7.93 0.00 40.91 3.46
3051 3537 4.689612 TTCATATTCGAGGAAGGAAGGG 57.310 45.455 0.00 0.00 0.00 3.95
3052 3538 3.923648 TCATATTCGAGGAAGGAAGGGA 58.076 45.455 0.00 0.00 0.00 4.20
3053 3539 3.898123 TCATATTCGAGGAAGGAAGGGAG 59.102 47.826 0.00 0.00 0.00 4.30
3054 3540 1.501582 ATTCGAGGAAGGAAGGGAGG 58.498 55.000 0.00 0.00 0.00 4.30
3055 3541 0.116541 TTCGAGGAAGGAAGGGAGGT 59.883 55.000 0.00 0.00 0.00 3.85
3056 3542 1.005228 TCGAGGAAGGAAGGGAGGTA 58.995 55.000 0.00 0.00 0.00 3.08
3057 3543 1.112950 CGAGGAAGGAAGGGAGGTAC 58.887 60.000 0.00 0.00 0.00 3.34
3058 3544 1.112950 GAGGAAGGAAGGGAGGTACG 58.887 60.000 0.00 0.00 0.00 3.67
3059 3545 0.412640 AGGAAGGAAGGGAGGTACGT 59.587 55.000 0.00 0.00 0.00 3.57
3060 3546 1.642762 AGGAAGGAAGGGAGGTACGTA 59.357 52.381 0.00 0.00 0.00 3.57
3061 3547 2.030371 GGAAGGAAGGGAGGTACGTAG 58.970 57.143 0.00 0.00 0.00 3.51
3062 3548 2.030371 GAAGGAAGGGAGGTACGTAGG 58.970 57.143 0.00 0.00 0.00 3.18
3063 3549 1.302907 AGGAAGGGAGGTACGTAGGA 58.697 55.000 0.00 0.00 0.00 2.94
3064 3550 1.642762 AGGAAGGGAGGTACGTAGGAA 59.357 52.381 0.00 0.00 0.00 3.36
3065 3551 2.246849 AGGAAGGGAGGTACGTAGGAAT 59.753 50.000 0.00 0.00 0.00 3.01
3066 3552 3.464833 AGGAAGGGAGGTACGTAGGAATA 59.535 47.826 0.00 0.00 0.00 1.75
3067 3553 4.107636 AGGAAGGGAGGTACGTAGGAATAT 59.892 45.833 0.00 0.00 0.00 1.28
3068 3554 4.462132 GGAAGGGAGGTACGTAGGAATATC 59.538 50.000 0.00 0.00 0.00 1.63
3069 3555 4.736611 AGGGAGGTACGTAGGAATATCA 57.263 45.455 0.00 0.00 0.00 2.15
3070 3556 4.664392 AGGGAGGTACGTAGGAATATCAG 58.336 47.826 0.00 0.00 0.00 2.90
3071 3557 4.353191 AGGGAGGTACGTAGGAATATCAGA 59.647 45.833 0.00 0.00 0.00 3.27
3072 3558 5.015391 AGGGAGGTACGTAGGAATATCAGAT 59.985 44.000 0.00 0.00 0.00 2.90
3073 3559 5.125739 GGGAGGTACGTAGGAATATCAGATG 59.874 48.000 0.00 0.00 0.00 2.90
3074 3560 5.393243 GGAGGTACGTAGGAATATCAGATGC 60.393 48.000 0.00 0.00 0.00 3.91
3075 3561 5.326069 AGGTACGTAGGAATATCAGATGCT 58.674 41.667 0.00 0.00 0.00 3.79
3076 3562 5.184096 AGGTACGTAGGAATATCAGATGCTG 59.816 44.000 0.00 0.00 0.00 4.41
3077 3563 5.183331 GGTACGTAGGAATATCAGATGCTGA 59.817 44.000 0.00 0.00 44.99 4.26
3078 3564 5.384063 ACGTAGGAATATCAGATGCTGAG 57.616 43.478 3.36 0.00 44.08 3.35
3079 3565 4.172505 CGTAGGAATATCAGATGCTGAGC 58.827 47.826 0.00 0.00 44.08 4.26
3080 3566 4.082300 CGTAGGAATATCAGATGCTGAGCT 60.082 45.833 5.83 0.00 44.08 4.09
3081 3567 4.274602 AGGAATATCAGATGCTGAGCTG 57.725 45.455 5.83 0.00 44.08 4.24
3082 3568 3.647113 AGGAATATCAGATGCTGAGCTGT 59.353 43.478 5.83 0.00 44.08 4.40
3083 3569 4.837298 AGGAATATCAGATGCTGAGCTGTA 59.163 41.667 5.83 0.00 44.08 2.74
3084 3570 5.047164 AGGAATATCAGATGCTGAGCTGTAG 60.047 44.000 5.83 0.00 44.08 2.74
3085 3571 5.047448 GGAATATCAGATGCTGAGCTGTAGA 60.047 44.000 5.83 0.00 44.08 2.59
3086 3572 5.648178 ATATCAGATGCTGAGCTGTAGAG 57.352 43.478 5.83 0.00 44.08 2.43
3087 3573 2.030371 TCAGATGCTGAGCTGTAGAGG 58.970 52.381 5.83 0.00 36.91 3.69
3088 3574 1.755959 CAGATGCTGAGCTGTAGAGGT 59.244 52.381 5.83 0.00 32.44 3.85
3089 3575 2.031120 AGATGCTGAGCTGTAGAGGTC 58.969 52.381 11.92 11.92 45.46 3.85
3096 3582 3.518634 GAGCTGTAGAGGTCAAAGAGG 57.481 52.381 13.76 0.00 44.74 3.69
3097 3583 3.093057 GAGCTGTAGAGGTCAAAGAGGA 58.907 50.000 13.76 0.00 44.74 3.71
3098 3584 3.511477 AGCTGTAGAGGTCAAAGAGGAA 58.489 45.455 0.00 0.00 0.00 3.36
3099 3585 3.904339 AGCTGTAGAGGTCAAAGAGGAAA 59.096 43.478 0.00 0.00 0.00 3.13
3100 3586 4.534103 AGCTGTAGAGGTCAAAGAGGAAAT 59.466 41.667 0.00 0.00 0.00 2.17
3101 3587 4.633565 GCTGTAGAGGTCAAAGAGGAAATG 59.366 45.833 0.00 0.00 0.00 2.32
3102 3588 5.799213 CTGTAGAGGTCAAAGAGGAAATGT 58.201 41.667 0.00 0.00 0.00 2.71
3103 3589 6.187727 TGTAGAGGTCAAAGAGGAAATGTT 57.812 37.500 0.00 0.00 0.00 2.71
3104 3590 6.231211 TGTAGAGGTCAAAGAGGAAATGTTC 58.769 40.000 0.00 0.00 0.00 3.18
3105 3591 5.574970 AGAGGTCAAAGAGGAAATGTTCT 57.425 39.130 0.00 0.00 0.00 3.01
3106 3592 5.555966 AGAGGTCAAAGAGGAAATGTTCTC 58.444 41.667 0.00 0.00 0.00 2.87
3107 3593 5.309282 AGAGGTCAAAGAGGAAATGTTCTCT 59.691 40.000 0.00 0.00 41.63 3.10
3108 3594 5.555966 AGGTCAAAGAGGAAATGTTCTCTC 58.444 41.667 0.00 0.00 39.22 3.20
3109 3595 5.309282 AGGTCAAAGAGGAAATGTTCTCTCT 59.691 40.000 0.00 0.11 39.22 3.10
3110 3596 6.498651 AGGTCAAAGAGGAAATGTTCTCTCTA 59.501 38.462 0.00 0.00 39.22 2.43
3111 3597 6.816140 GGTCAAAGAGGAAATGTTCTCTCTAG 59.184 42.308 0.00 0.00 39.22 2.43
3112 3598 7.382898 GTCAAAGAGGAAATGTTCTCTCTAGT 58.617 38.462 0.00 0.00 39.22 2.57
3113 3599 7.544217 GTCAAAGAGGAAATGTTCTCTCTAGTC 59.456 40.741 0.00 0.00 39.22 2.59
3114 3600 5.828299 AGAGGAAATGTTCTCTCTAGTCG 57.172 43.478 0.00 0.00 35.65 4.18
3115 3601 4.097286 AGAGGAAATGTTCTCTCTAGTCGC 59.903 45.833 0.00 0.00 35.65 5.19
3116 3602 3.131400 AGGAAATGTTCTCTCTAGTCGCC 59.869 47.826 0.00 0.00 0.00 5.54
3117 3603 3.449632 GAAATGTTCTCTCTAGTCGCCC 58.550 50.000 0.00 0.00 0.00 6.13
3118 3604 1.404843 ATGTTCTCTCTAGTCGCCCC 58.595 55.000 0.00 0.00 0.00 5.80
3119 3605 0.683504 TGTTCTCTCTAGTCGCCCCC 60.684 60.000 0.00 0.00 0.00 5.40
3133 3619 4.437587 CCCCCTGCCCTCTGCTTG 62.438 72.222 0.00 0.00 42.00 4.01
3137 3623 4.044439 CTGCCCTCTGCTTGCCCT 62.044 66.667 0.00 0.00 42.00 5.19
3138 3624 3.991725 CTGCCCTCTGCTTGCCCTC 62.992 68.421 0.00 0.00 42.00 4.30
3140 3626 3.710722 CCCTCTGCTTGCCCTCGT 61.711 66.667 0.00 0.00 0.00 4.18
3141 3627 2.125350 CCTCTGCTTGCCCTCGTC 60.125 66.667 0.00 0.00 0.00 4.20
3142 3628 2.654079 CCTCTGCTTGCCCTCGTCT 61.654 63.158 0.00 0.00 0.00 4.18
3143 3629 1.294780 CTCTGCTTGCCCTCGTCTT 59.705 57.895 0.00 0.00 0.00 3.01
3144 3630 0.321122 CTCTGCTTGCCCTCGTCTTT 60.321 55.000 0.00 0.00 0.00 2.52
3145 3631 0.108585 TCTGCTTGCCCTCGTCTTTT 59.891 50.000 0.00 0.00 0.00 2.27
3146 3632 1.346395 TCTGCTTGCCCTCGTCTTTTA 59.654 47.619 0.00 0.00 0.00 1.52
3147 3633 2.027192 TCTGCTTGCCCTCGTCTTTTAT 60.027 45.455 0.00 0.00 0.00 1.40
3148 3634 2.352960 CTGCTTGCCCTCGTCTTTTATC 59.647 50.000 0.00 0.00 0.00 1.75
3149 3635 2.027192 TGCTTGCCCTCGTCTTTTATCT 60.027 45.455 0.00 0.00 0.00 1.98
3150 3636 2.609916 GCTTGCCCTCGTCTTTTATCTC 59.390 50.000 0.00 0.00 0.00 2.75
3151 3637 3.680196 GCTTGCCCTCGTCTTTTATCTCT 60.680 47.826 0.00 0.00 0.00 3.10
3152 3638 4.508662 CTTGCCCTCGTCTTTTATCTCTT 58.491 43.478 0.00 0.00 0.00 2.85
3153 3639 4.553330 TGCCCTCGTCTTTTATCTCTTT 57.447 40.909 0.00 0.00 0.00 2.52
3154 3640 4.504858 TGCCCTCGTCTTTTATCTCTTTC 58.495 43.478 0.00 0.00 0.00 2.62
3155 3641 3.872182 GCCCTCGTCTTTTATCTCTTTCC 59.128 47.826 0.00 0.00 0.00 3.13
3156 3642 4.443621 CCCTCGTCTTTTATCTCTTTCCC 58.556 47.826 0.00 0.00 0.00 3.97
3157 3643 4.162509 CCCTCGTCTTTTATCTCTTTCCCT 59.837 45.833 0.00 0.00 0.00 4.20
3158 3644 5.338463 CCCTCGTCTTTTATCTCTTTCCCTT 60.338 44.000 0.00 0.00 0.00 3.95
3159 3645 6.174049 CCTCGTCTTTTATCTCTTTCCCTTT 58.826 40.000 0.00 0.00 0.00 3.11
3160 3646 6.314152 CCTCGTCTTTTATCTCTTTCCCTTTC 59.686 42.308 0.00 0.00 0.00 2.62
3161 3647 7.005709 TCGTCTTTTATCTCTTTCCCTTTCT 57.994 36.000 0.00 0.00 0.00 2.52
3162 3648 8.130671 TCGTCTTTTATCTCTTTCCCTTTCTA 57.869 34.615 0.00 0.00 0.00 2.10
3163 3649 8.033626 TCGTCTTTTATCTCTTTCCCTTTCTAC 58.966 37.037 0.00 0.00 0.00 2.59
3164 3650 7.009357 CGTCTTTTATCTCTTTCCCTTTCTACG 59.991 40.741 0.00 0.00 0.00 3.51
3165 3651 8.033626 GTCTTTTATCTCTTTCCCTTTCTACGA 58.966 37.037 0.00 0.00 0.00 3.43
3166 3652 8.251721 TCTTTTATCTCTTTCCCTTTCTACGAG 58.748 37.037 0.00 0.00 0.00 4.18
3167 3653 6.466885 TTATCTCTTTCCCTTTCTACGAGG 57.533 41.667 0.00 0.00 0.00 4.63
3168 3654 3.775910 TCTCTTTCCCTTTCTACGAGGT 58.224 45.455 0.00 0.00 32.15 3.85
3169 3655 4.158015 TCTCTTTCCCTTTCTACGAGGTT 58.842 43.478 0.00 0.00 32.15 3.50
3170 3656 4.021368 TCTCTTTCCCTTTCTACGAGGTTG 60.021 45.833 0.00 0.00 32.15 3.77
3171 3657 3.899360 TCTTTCCCTTTCTACGAGGTTGA 59.101 43.478 0.00 0.00 32.15 3.18
3172 3658 4.345837 TCTTTCCCTTTCTACGAGGTTGAA 59.654 41.667 0.00 0.00 32.15 2.69
3173 3659 4.693042 TTCCCTTTCTACGAGGTTGAAA 57.307 40.909 0.00 5.53 35.65 2.69
3174 3660 4.267349 TCCCTTTCTACGAGGTTGAAAG 57.733 45.455 19.01 19.01 46.57 2.62
3178 3664 5.847670 CTTTCTACGAGGTTGAAAGGAAG 57.152 43.478 18.51 0.00 44.85 3.46
3179 3665 5.539048 CTTTCTACGAGGTTGAAAGGAAGA 58.461 41.667 18.51 0.00 44.85 2.87
3180 3666 4.785511 TCTACGAGGTTGAAAGGAAGAG 57.214 45.455 0.00 0.00 0.00 2.85
3181 3667 4.404640 TCTACGAGGTTGAAAGGAAGAGA 58.595 43.478 0.00 0.00 0.00 3.10
3182 3668 5.017490 TCTACGAGGTTGAAAGGAAGAGAT 58.983 41.667 0.00 0.00 0.00 2.75
3183 3669 6.185511 TCTACGAGGTTGAAAGGAAGAGATA 58.814 40.000 0.00 0.00 0.00 1.98
3184 3670 5.941555 ACGAGGTTGAAAGGAAGAGATAT 57.058 39.130 0.00 0.00 0.00 1.63
3185 3671 5.665459 ACGAGGTTGAAAGGAAGAGATATG 58.335 41.667 0.00 0.00 0.00 1.78
3186 3672 5.187967 ACGAGGTTGAAAGGAAGAGATATGT 59.812 40.000 0.00 0.00 0.00 2.29
3187 3673 5.521735 CGAGGTTGAAAGGAAGAGATATGTG 59.478 44.000 0.00 0.00 0.00 3.21
3188 3674 5.749462 AGGTTGAAAGGAAGAGATATGTGG 58.251 41.667 0.00 0.00 0.00 4.17
3189 3675 4.336713 GGTTGAAAGGAAGAGATATGTGGC 59.663 45.833 0.00 0.00 0.00 5.01
3190 3676 5.189180 GTTGAAAGGAAGAGATATGTGGCT 58.811 41.667 0.00 0.00 0.00 4.75
3191 3677 6.349300 GTTGAAAGGAAGAGATATGTGGCTA 58.651 40.000 0.00 0.00 0.00 3.93
3192 3678 6.166984 TGAAAGGAAGAGATATGTGGCTAG 57.833 41.667 0.00 0.00 0.00 3.42
3193 3679 4.615588 AAGGAAGAGATATGTGGCTAGC 57.384 45.455 6.04 6.04 0.00 3.42
3194 3680 2.903135 AGGAAGAGATATGTGGCTAGCC 59.097 50.000 27.71 27.71 0.00 3.93
3195 3681 2.353208 GGAAGAGATATGTGGCTAGCCG 60.353 54.545 28.28 0.00 39.42 5.52
3196 3682 2.002505 AGAGATATGTGGCTAGCCGT 57.997 50.000 28.28 18.66 39.42 5.68
3197 3683 3.156288 AGAGATATGTGGCTAGCCGTA 57.844 47.619 28.28 19.69 39.42 4.02
3198 3684 2.820787 AGAGATATGTGGCTAGCCGTAC 59.179 50.000 28.28 21.59 39.42 3.67
3199 3685 2.557056 GAGATATGTGGCTAGCCGTACA 59.443 50.000 28.28 26.26 39.42 2.90
3200 3686 3.165875 AGATATGTGGCTAGCCGTACAT 58.834 45.455 31.35 31.35 36.85 2.29
3201 3687 2.812358 TATGTGGCTAGCCGTACATG 57.188 50.000 34.05 0.00 34.77 3.21
3202 3688 0.532862 ATGTGGCTAGCCGTACATGC 60.533 55.000 29.51 14.99 39.42 4.06
3203 3689 1.887707 GTGGCTAGCCGTACATGCC 60.888 63.158 28.28 2.86 43.49 4.40
3204 3690 2.063979 TGGCTAGCCGTACATGCCT 61.064 57.895 28.28 0.00 43.57 4.75
3205 3691 0.757561 TGGCTAGCCGTACATGCCTA 60.758 55.000 28.28 4.00 43.57 3.93
3206 3692 0.319641 GGCTAGCCGTACATGCCTAC 60.320 60.000 20.16 0.00 40.36 3.18
3207 3693 0.319641 GCTAGCCGTACATGCCTACC 60.320 60.000 2.29 0.00 0.00 3.18
3208 3694 1.037493 CTAGCCGTACATGCCTACCA 58.963 55.000 0.00 0.00 0.00 3.25
3209 3695 1.411246 CTAGCCGTACATGCCTACCAA 59.589 52.381 0.00 0.00 0.00 3.67
3210 3696 0.616371 AGCCGTACATGCCTACCAAA 59.384 50.000 0.00 0.00 0.00 3.28
3211 3697 1.211949 AGCCGTACATGCCTACCAAAT 59.788 47.619 0.00 0.00 0.00 2.32
3212 3698 2.021457 GCCGTACATGCCTACCAAATT 58.979 47.619 0.00 0.00 0.00 1.82
3213 3699 2.032924 GCCGTACATGCCTACCAAATTC 59.967 50.000 0.00 0.00 0.00 2.17
3214 3700 3.275143 CCGTACATGCCTACCAAATTCA 58.725 45.455 0.00 0.00 0.00 2.57
3215 3701 3.312421 CCGTACATGCCTACCAAATTCAG 59.688 47.826 0.00 0.00 0.00 3.02
3216 3702 4.188462 CGTACATGCCTACCAAATTCAGA 58.812 43.478 0.00 0.00 0.00 3.27
3217 3703 4.271049 CGTACATGCCTACCAAATTCAGAG 59.729 45.833 0.00 0.00 0.00 3.35
3218 3704 4.574674 ACATGCCTACCAAATTCAGAGA 57.425 40.909 0.00 0.00 0.00 3.10
3219 3705 5.121380 ACATGCCTACCAAATTCAGAGAT 57.879 39.130 0.00 0.00 0.00 2.75
3220 3706 6.252599 ACATGCCTACCAAATTCAGAGATA 57.747 37.500 0.00 0.00 0.00 1.98
3221 3707 6.662755 ACATGCCTACCAAATTCAGAGATAA 58.337 36.000 0.00 0.00 0.00 1.75
3222 3708 7.118723 ACATGCCTACCAAATTCAGAGATAAA 58.881 34.615 0.00 0.00 0.00 1.40
3223 3709 7.284034 ACATGCCTACCAAATTCAGAGATAAAG 59.716 37.037 0.00 0.00 0.00 1.85
3224 3710 6.957631 TGCCTACCAAATTCAGAGATAAAGA 58.042 36.000 0.00 0.00 0.00 2.52
3225 3711 7.402054 TGCCTACCAAATTCAGAGATAAAGAA 58.598 34.615 0.00 0.00 0.00 2.52
3226 3712 7.888021 TGCCTACCAAATTCAGAGATAAAGAAA 59.112 33.333 0.00 0.00 0.00 2.52
3227 3713 8.739972 GCCTACCAAATTCAGAGATAAAGAAAA 58.260 33.333 0.00 0.00 0.00 2.29
3245 3731 7.851387 AAGAAAATTTAGCTAGACTACCAGC 57.149 36.000 0.00 0.00 38.09 4.85
3247 3733 7.625469 AGAAAATTTAGCTAGACTACCAGCTT 58.375 34.615 3.61 0.00 45.80 3.74
3248 3734 7.766738 AGAAAATTTAGCTAGACTACCAGCTTC 59.233 37.037 3.61 0.00 45.80 3.86
3249 3735 5.538849 ATTTAGCTAGACTACCAGCTTCC 57.461 43.478 3.61 0.00 45.80 3.46
3250 3736 1.394618 AGCTAGACTACCAGCTTCCG 58.605 55.000 0.00 0.00 45.80 4.30
3251 3737 1.064611 AGCTAGACTACCAGCTTCCGA 60.065 52.381 0.00 0.00 45.80 4.55
3252 3738 1.335496 GCTAGACTACCAGCTTCCGAG 59.665 57.143 0.00 0.00 34.86 4.63
3253 3739 2.645802 CTAGACTACCAGCTTCCGAGT 58.354 52.381 0.00 0.00 0.00 4.18
3254 3740 1.926108 AGACTACCAGCTTCCGAGTT 58.074 50.000 0.00 0.00 0.00 3.01
3255 3741 2.249139 AGACTACCAGCTTCCGAGTTT 58.751 47.619 0.00 0.00 0.00 2.66
3256 3742 2.231721 AGACTACCAGCTTCCGAGTTTC 59.768 50.000 0.00 0.00 0.00 2.78
3257 3743 2.231721 GACTACCAGCTTCCGAGTTTCT 59.768 50.000 0.00 0.00 0.00 2.52
3258 3744 2.633481 ACTACCAGCTTCCGAGTTTCTT 59.367 45.455 0.00 0.00 0.00 2.52
3259 3745 2.171341 ACCAGCTTCCGAGTTTCTTC 57.829 50.000 0.00 0.00 0.00 2.87
3260 3746 1.694696 ACCAGCTTCCGAGTTTCTTCT 59.305 47.619 0.00 0.00 0.00 2.85
3261 3747 2.289133 ACCAGCTTCCGAGTTTCTTCTC 60.289 50.000 0.00 0.00 0.00 2.87
3262 3748 2.342179 CAGCTTCCGAGTTTCTTCTCC 58.658 52.381 0.00 0.00 0.00 3.71
3263 3749 2.028567 CAGCTTCCGAGTTTCTTCTCCT 60.029 50.000 0.00 0.00 0.00 3.69
3264 3750 3.193691 CAGCTTCCGAGTTTCTTCTCCTA 59.806 47.826 0.00 0.00 0.00 2.94
3265 3751 3.445805 AGCTTCCGAGTTTCTTCTCCTAG 59.554 47.826 0.00 0.00 0.00 3.02
3266 3752 3.444388 GCTTCCGAGTTTCTTCTCCTAGA 59.556 47.826 0.00 0.00 0.00 2.43
3267 3753 4.675933 GCTTCCGAGTTTCTTCTCCTAGAC 60.676 50.000 0.00 0.00 0.00 2.59
3268 3754 4.304048 TCCGAGTTTCTTCTCCTAGACT 57.696 45.455 0.00 0.00 0.00 3.24
3269 3755 4.263435 TCCGAGTTTCTTCTCCTAGACTC 58.737 47.826 0.00 0.00 0.00 3.36
3270 3756 4.011023 CCGAGTTTCTTCTCCTAGACTCA 58.989 47.826 0.00 0.00 0.00 3.41
3271 3757 4.642885 CCGAGTTTCTTCTCCTAGACTCAT 59.357 45.833 0.00 0.00 0.00 2.90
3272 3758 5.823570 CCGAGTTTCTTCTCCTAGACTCATA 59.176 44.000 0.00 0.00 0.00 2.15
3273 3759 6.319152 CCGAGTTTCTTCTCCTAGACTCATAA 59.681 42.308 0.00 0.00 0.00 1.90
3274 3760 7.148052 CCGAGTTTCTTCTCCTAGACTCATAAA 60.148 40.741 0.00 0.00 0.00 1.40
3275 3761 8.244802 CGAGTTTCTTCTCCTAGACTCATAAAA 58.755 37.037 0.00 0.00 0.00 1.52
3276 3762 9.930693 GAGTTTCTTCTCCTAGACTCATAAAAA 57.069 33.333 0.00 0.00 0.00 1.94
3296 3782 5.694231 AAAAATTGGCAGGCTTCAAAATC 57.306 34.783 4.46 0.00 0.00 2.17
3297 3783 4.628963 AAATTGGCAGGCTTCAAAATCT 57.371 36.364 4.46 0.00 0.00 2.40
3298 3784 4.628963 AATTGGCAGGCTTCAAAATCTT 57.371 36.364 4.46 0.00 0.00 2.40
3299 3785 4.628963 ATTGGCAGGCTTCAAAATCTTT 57.371 36.364 4.46 0.00 0.00 2.52
3300 3786 4.420522 TTGGCAGGCTTCAAAATCTTTT 57.579 36.364 0.00 0.00 0.00 2.27
3301 3787 3.993920 TGGCAGGCTTCAAAATCTTTTC 58.006 40.909 0.00 0.00 0.00 2.29
3302 3788 3.642848 TGGCAGGCTTCAAAATCTTTTCT 59.357 39.130 0.00 0.00 0.00 2.52
3303 3789 4.240888 GGCAGGCTTCAAAATCTTTTCTC 58.759 43.478 0.00 0.00 0.00 2.87
3304 3790 4.240888 GCAGGCTTCAAAATCTTTTCTCC 58.759 43.478 0.00 0.00 0.00 3.71
3305 3791 4.021632 GCAGGCTTCAAAATCTTTTCTCCT 60.022 41.667 0.00 0.00 0.00 3.69
3306 3792 5.183904 GCAGGCTTCAAAATCTTTTCTCCTA 59.816 40.000 0.00 0.00 0.00 2.94
3307 3793 6.624642 GCAGGCTTCAAAATCTTTTCTCCTAG 60.625 42.308 0.00 0.00 0.00 3.02
3308 3794 6.656693 CAGGCTTCAAAATCTTTTCTCCTAGA 59.343 38.462 0.00 0.00 0.00 2.43
3309 3795 7.175641 CAGGCTTCAAAATCTTTTCTCCTAGAA 59.824 37.037 0.00 0.00 31.28 2.10
3310 3796 7.892771 AGGCTTCAAAATCTTTTCTCCTAGAAT 59.107 33.333 0.00 0.00 33.67 2.40
3311 3797 8.526978 GGCTTCAAAATCTTTTCTCCTAGAATT 58.473 33.333 0.00 0.00 33.67 2.17
3312 3798 9.566530 GCTTCAAAATCTTTTCTCCTAGAATTC 57.433 33.333 0.00 0.00 33.67 2.17
3318 3804 8.485976 AATCTTTTCTCCTAGAATTCAACTCG 57.514 34.615 8.44 0.00 33.67 4.18
3319 3805 5.869888 TCTTTTCTCCTAGAATTCAACTCGC 59.130 40.000 8.44 0.00 33.67 5.03
3320 3806 3.422417 TCTCCTAGAATTCAACTCGCG 57.578 47.619 8.44 0.00 0.00 5.87
3321 3807 2.099263 TCTCCTAGAATTCAACTCGCGG 59.901 50.000 6.13 0.00 0.00 6.46
3322 3808 2.097036 TCCTAGAATTCAACTCGCGGA 58.903 47.619 6.13 0.00 0.00 5.54
3323 3809 2.693591 TCCTAGAATTCAACTCGCGGAT 59.306 45.455 6.13 0.00 0.00 4.18
3324 3810 3.887110 TCCTAGAATTCAACTCGCGGATA 59.113 43.478 6.13 0.00 0.00 2.59
3325 3811 4.340097 TCCTAGAATTCAACTCGCGGATAA 59.660 41.667 6.13 0.00 0.00 1.75
3326 3812 4.444720 CCTAGAATTCAACTCGCGGATAAC 59.555 45.833 6.13 0.00 0.00 1.89
3342 3828 5.484173 GGATAACGATTGCATGTTTCTCA 57.516 39.130 5.04 0.00 0.00 3.27
3343 3829 5.266242 GGATAACGATTGCATGTTTCTCAC 58.734 41.667 5.04 0.00 0.00 3.51
3344 3830 5.065218 GGATAACGATTGCATGTTTCTCACT 59.935 40.000 5.04 0.00 0.00 3.41
3345 3831 3.818961 ACGATTGCATGTTTCTCACTG 57.181 42.857 0.00 0.00 0.00 3.66
3346 3832 3.141398 ACGATTGCATGTTTCTCACTGT 58.859 40.909 0.00 0.00 0.00 3.55
3347 3833 3.058708 ACGATTGCATGTTTCTCACTGTG 60.059 43.478 0.17 0.17 0.00 3.66
3348 3834 3.058708 CGATTGCATGTTTCTCACTGTGT 60.059 43.478 7.79 0.00 0.00 3.72
3349 3835 4.555313 CGATTGCATGTTTCTCACTGTGTT 60.555 41.667 7.79 0.00 0.00 3.32
3350 3836 4.717233 TTGCATGTTTCTCACTGTGTTT 57.283 36.364 7.79 0.00 0.00 2.83
3351 3837 4.717233 TGCATGTTTCTCACTGTGTTTT 57.283 36.364 7.79 0.00 0.00 2.43
3352 3838 4.671377 TGCATGTTTCTCACTGTGTTTTC 58.329 39.130 7.79 0.00 0.00 2.29
3353 3839 4.157472 TGCATGTTTCTCACTGTGTTTTCA 59.843 37.500 7.79 3.34 0.00 2.69
3354 3840 5.163530 TGCATGTTTCTCACTGTGTTTTCAT 60.164 36.000 7.79 5.34 0.00 2.57
3355 3841 5.400485 GCATGTTTCTCACTGTGTTTTCATC 59.600 40.000 7.79 0.00 0.00 2.92
3356 3842 6.732154 CATGTTTCTCACTGTGTTTTCATCT 58.268 36.000 7.79 0.00 0.00 2.90
3357 3843 7.520453 GCATGTTTCTCACTGTGTTTTCATCTA 60.520 37.037 7.79 0.00 0.00 1.98
3358 3844 8.509690 CATGTTTCTCACTGTGTTTTCATCTAT 58.490 33.333 7.79 0.00 0.00 1.98
3359 3845 7.864686 TGTTTCTCACTGTGTTTTCATCTATG 58.135 34.615 7.79 0.00 0.00 2.23
3360 3846 7.498900 TGTTTCTCACTGTGTTTTCATCTATGT 59.501 33.333 7.79 0.00 0.00 2.29
3361 3847 7.658179 TTCTCACTGTGTTTTCATCTATGTC 57.342 36.000 7.79 0.00 0.00 3.06
3362 3848 6.166279 TCTCACTGTGTTTTCATCTATGTCC 58.834 40.000 7.79 0.00 0.00 4.02
3363 3849 5.245531 TCACTGTGTTTTCATCTATGTCCC 58.754 41.667 7.79 0.00 0.00 4.46
3364 3850 5.013079 TCACTGTGTTTTCATCTATGTCCCT 59.987 40.000 7.79 0.00 0.00 4.20
3365 3851 5.122869 CACTGTGTTTTCATCTATGTCCCTG 59.877 44.000 0.00 0.00 0.00 4.45
3366 3852 5.013079 ACTGTGTTTTCATCTATGTCCCTGA 59.987 40.000 0.00 0.00 0.00 3.86
3367 3853 6.065976 TGTGTTTTCATCTATGTCCCTGAT 57.934 37.500 0.00 0.00 0.00 2.90
3368 3854 6.115446 TGTGTTTTCATCTATGTCCCTGATC 58.885 40.000 0.00 0.00 0.00 2.92
3369 3855 6.115446 GTGTTTTCATCTATGTCCCTGATCA 58.885 40.000 0.00 0.00 0.00 2.92
3370 3856 6.769822 GTGTTTTCATCTATGTCCCTGATCAT 59.230 38.462 0.00 0.00 0.00 2.45
3371 3857 7.284034 GTGTTTTCATCTATGTCCCTGATCATT 59.716 37.037 0.00 0.00 0.00 2.57
3372 3858 7.283807 TGTTTTCATCTATGTCCCTGATCATTG 59.716 37.037 0.00 0.00 0.00 2.82
3373 3859 6.505048 TTCATCTATGTCCCTGATCATTGT 57.495 37.500 0.00 0.00 0.00 2.71
3374 3860 6.505048 TCATCTATGTCCCTGATCATTGTT 57.495 37.500 0.00 0.00 0.00 2.83
3375 3861 7.616528 TCATCTATGTCCCTGATCATTGTTA 57.383 36.000 0.00 0.00 0.00 2.41
3376 3862 8.033178 TCATCTATGTCCCTGATCATTGTTAA 57.967 34.615 0.00 0.00 0.00 2.01
3377 3863 8.493607 TCATCTATGTCCCTGATCATTGTTAAA 58.506 33.333 0.00 0.00 0.00 1.52
3378 3864 8.562892 CATCTATGTCCCTGATCATTGTTAAAC 58.437 37.037 0.00 0.00 0.00 2.01
3379 3865 7.861629 TCTATGTCCCTGATCATTGTTAAACT 58.138 34.615 0.00 0.00 0.00 2.66
3380 3866 6.764308 ATGTCCCTGATCATTGTTAAACTG 57.236 37.500 0.00 0.00 0.00 3.16
3381 3867 5.630121 TGTCCCTGATCATTGTTAAACTGT 58.370 37.500 0.00 0.00 0.00 3.55
3382 3868 5.705441 TGTCCCTGATCATTGTTAAACTGTC 59.295 40.000 0.00 0.00 0.00 3.51
3383 3869 5.940470 GTCCCTGATCATTGTTAAACTGTCT 59.060 40.000 0.00 0.00 0.00 3.41
3384 3870 5.939883 TCCCTGATCATTGTTAAACTGTCTG 59.060 40.000 0.00 0.00 0.00 3.51
3385 3871 5.939883 CCCTGATCATTGTTAAACTGTCTGA 59.060 40.000 0.00 0.00 0.00 3.27
3386 3872 6.128172 CCCTGATCATTGTTAAACTGTCTGAC 60.128 42.308 0.00 0.00 0.00 3.51
3387 3873 6.401474 CCTGATCATTGTTAAACTGTCTGACG 60.401 42.308 0.00 0.99 0.00 4.35
3388 3874 6.220201 TGATCATTGTTAAACTGTCTGACGA 58.780 36.000 2.98 0.00 0.00 4.20
3389 3875 6.704050 TGATCATTGTTAAACTGTCTGACGAA 59.296 34.615 2.98 0.00 0.00 3.85
3390 3876 6.912203 TCATTGTTAAACTGTCTGACGAAA 57.088 33.333 2.98 0.00 0.00 3.46
3391 3877 6.711579 TCATTGTTAAACTGTCTGACGAAAC 58.288 36.000 2.98 3.98 0.00 2.78
3392 3878 6.314152 TCATTGTTAAACTGTCTGACGAAACA 59.686 34.615 2.98 6.29 0.00 2.83
3393 3879 6.483385 TTGTTAAACTGTCTGACGAAACAA 57.517 33.333 15.53 15.53 34.29 2.83
3394 3880 6.102006 TGTTAAACTGTCTGACGAAACAAG 57.898 37.500 2.98 0.00 0.00 3.16
3395 3881 5.870433 TGTTAAACTGTCTGACGAAACAAGA 59.130 36.000 2.98 0.00 0.00 3.02
3396 3882 6.369340 TGTTAAACTGTCTGACGAAACAAGAA 59.631 34.615 2.98 0.00 0.00 2.52
3397 3883 4.859629 AACTGTCTGACGAAACAAGAAC 57.140 40.909 2.98 0.00 0.00 3.01
3398 3884 3.857052 ACTGTCTGACGAAACAAGAACA 58.143 40.909 2.98 0.00 0.00 3.18
3399 3885 3.617263 ACTGTCTGACGAAACAAGAACAC 59.383 43.478 2.98 0.00 0.00 3.32
3400 3886 2.601314 TGTCTGACGAAACAAGAACACG 59.399 45.455 2.98 0.00 0.00 4.49
3401 3887 1.591158 TCTGACGAAACAAGAACACGC 59.409 47.619 0.00 0.00 0.00 5.34
3402 3888 0.653636 TGACGAAACAAGAACACGCC 59.346 50.000 0.00 0.00 0.00 5.68
3403 3889 0.935196 GACGAAACAAGAACACGCCT 59.065 50.000 0.00 0.00 0.00 5.52
3404 3890 2.129607 GACGAAACAAGAACACGCCTA 58.870 47.619 0.00 0.00 0.00 3.93
3405 3891 2.540931 GACGAAACAAGAACACGCCTAA 59.459 45.455 0.00 0.00 0.00 2.69
3406 3892 3.135994 ACGAAACAAGAACACGCCTAAT 58.864 40.909 0.00 0.00 0.00 1.73
3407 3893 3.185797 ACGAAACAAGAACACGCCTAATC 59.814 43.478 0.00 0.00 0.00 1.75
3408 3894 3.185594 CGAAACAAGAACACGCCTAATCA 59.814 43.478 0.00 0.00 0.00 2.57
3409 3895 4.319190 CGAAACAAGAACACGCCTAATCAA 60.319 41.667 0.00 0.00 0.00 2.57
3410 3896 5.508200 AAACAAGAACACGCCTAATCAAA 57.492 34.783 0.00 0.00 0.00 2.69
3411 3897 5.508200 AACAAGAACACGCCTAATCAAAA 57.492 34.783 0.00 0.00 0.00 2.44
3412 3898 5.108385 ACAAGAACACGCCTAATCAAAAG 57.892 39.130 0.00 0.00 0.00 2.27
3413 3899 4.578928 ACAAGAACACGCCTAATCAAAAGT 59.421 37.500 0.00 0.00 0.00 2.66
3414 3900 4.749245 AGAACACGCCTAATCAAAAGTG 57.251 40.909 0.00 0.00 35.89 3.16
3415 3901 4.134563 AGAACACGCCTAATCAAAAGTGT 58.865 39.130 0.00 0.00 43.56 3.55
3416 3902 4.911514 AACACGCCTAATCAAAAGTGTT 57.088 36.364 6.02 6.02 44.67 3.32
3417 3903 4.223320 ACACGCCTAATCAAAAGTGTTG 57.777 40.909 0.00 0.00 39.44 3.33
3418 3904 3.880490 ACACGCCTAATCAAAAGTGTTGA 59.120 39.130 0.00 0.00 39.44 3.18
3419 3905 4.024048 ACACGCCTAATCAAAAGTGTTGAG 60.024 41.667 1.51 0.00 39.44 3.02
3420 3906 4.024048 CACGCCTAATCAAAAGTGTTGAGT 60.024 41.667 1.51 1.27 0.00 3.41
3421 3907 5.178623 CACGCCTAATCAAAAGTGTTGAGTA 59.821 40.000 1.51 2.50 0.00 2.59
3422 3908 5.938125 ACGCCTAATCAAAAGTGTTGAGTAT 59.062 36.000 3.77 0.00 30.15 2.12
3423 3909 6.128282 ACGCCTAATCAAAAGTGTTGAGTATG 60.128 38.462 3.77 3.06 30.15 2.39
3424 3910 6.128282 CGCCTAATCAAAAGTGTTGAGTATGT 60.128 38.462 3.77 0.00 30.15 2.29
3425 3911 7.023575 GCCTAATCAAAAGTGTTGAGTATGTG 58.976 38.462 3.77 0.00 30.15 3.21
3426 3912 7.308589 GCCTAATCAAAAGTGTTGAGTATGTGT 60.309 37.037 3.77 0.00 30.15 3.72
3427 3913 8.017373 CCTAATCAAAAGTGTTGAGTATGTGTG 58.983 37.037 3.77 0.00 30.15 3.82
3428 3914 6.942532 ATCAAAAGTGTTGAGTATGTGTGT 57.057 33.333 1.51 0.00 0.00 3.72
3429 3915 6.751514 TCAAAAGTGTTGAGTATGTGTGTT 57.248 33.333 0.00 0.00 0.00 3.32
3430 3916 6.550843 TCAAAAGTGTTGAGTATGTGTGTTG 58.449 36.000 0.00 0.00 0.00 3.33
3431 3917 6.150307 TCAAAAGTGTTGAGTATGTGTGTTGT 59.850 34.615 0.00 0.00 0.00 3.32
3432 3918 5.484173 AAGTGTTGAGTATGTGTGTTGTG 57.516 39.130 0.00 0.00 0.00 3.33
3433 3919 3.312421 AGTGTTGAGTATGTGTGTTGTGC 59.688 43.478 0.00 0.00 0.00 4.57
3434 3920 3.064682 GTGTTGAGTATGTGTGTTGTGCA 59.935 43.478 0.00 0.00 0.00 4.57
3435 3921 3.882288 TGTTGAGTATGTGTGTTGTGCAT 59.118 39.130 0.00 0.00 0.00 3.96
3436 3922 5.049749 GTGTTGAGTATGTGTGTTGTGCATA 60.050 40.000 0.00 0.00 0.00 3.14
3437 3923 5.704978 TGTTGAGTATGTGTGTTGTGCATAT 59.295 36.000 0.00 0.00 0.00 1.78
3438 3924 6.206438 TGTTGAGTATGTGTGTTGTGCATATT 59.794 34.615 0.00 0.00 0.00 1.28
3439 3925 6.816134 TGAGTATGTGTGTTGTGCATATTT 57.184 33.333 0.00 0.00 0.00 1.40
3440 3926 6.610456 TGAGTATGTGTGTTGTGCATATTTG 58.390 36.000 0.00 0.00 0.00 2.32
3441 3927 6.206438 TGAGTATGTGTGTTGTGCATATTTGT 59.794 34.615 0.00 0.00 0.00 2.83
3442 3928 6.380995 AGTATGTGTGTTGTGCATATTTGTG 58.619 36.000 0.00 0.00 0.00 3.33
3443 3929 4.645762 TGTGTGTTGTGCATATTTGTGT 57.354 36.364 0.00 0.00 0.00 3.72
3444 3930 5.757850 TGTGTGTTGTGCATATTTGTGTA 57.242 34.783 0.00 0.00 0.00 2.90
3445 3931 6.324561 TGTGTGTTGTGCATATTTGTGTAT 57.675 33.333 0.00 0.00 0.00 2.29
3446 3932 6.743110 TGTGTGTTGTGCATATTTGTGTATT 58.257 32.000 0.00 0.00 0.00 1.89
3447 3933 6.640092 TGTGTGTTGTGCATATTTGTGTATTG 59.360 34.615 0.00 0.00 0.00 1.90
3448 3934 6.089283 GTGTGTTGTGCATATTTGTGTATTGG 59.911 38.462 0.00 0.00 0.00 3.16
3449 3935 5.576384 GTGTTGTGCATATTTGTGTATTGGG 59.424 40.000 0.00 0.00 0.00 4.12
3450 3936 4.383850 TGTGCATATTTGTGTATTGGGC 57.616 40.909 0.00 0.00 0.00 5.36
3451 3937 3.131933 TGTGCATATTTGTGTATTGGGCC 59.868 43.478 0.00 0.00 0.00 5.80
3452 3938 2.697751 TGCATATTTGTGTATTGGGCCC 59.302 45.455 17.59 17.59 0.00 5.80
3453 3939 2.697751 GCATATTTGTGTATTGGGCCCA 59.302 45.455 24.45 24.45 0.00 5.36
3454 3940 3.492482 GCATATTTGTGTATTGGGCCCAC 60.492 47.826 28.70 14.93 0.00 4.61
3455 3941 1.567357 ATTTGTGTATTGGGCCCACC 58.433 50.000 28.70 16.48 40.81 4.61
3456 3942 0.485099 TTTGTGTATTGGGCCCACCT 59.515 50.000 28.70 18.23 41.11 4.00
3457 3943 0.485099 TTGTGTATTGGGCCCACCTT 59.515 50.000 28.70 15.50 41.11 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 1.595794 GAGCAAACCGACTTCGAACAA 59.404 47.619 0.00 0.00 43.02 2.83
107 108 9.915629 AGAAACATAACACAAAAGTACAAAACA 57.084 25.926 0.00 0.00 0.00 2.83
122 124 2.939756 ACACGCACACAGAAACATAACA 59.060 40.909 0.00 0.00 0.00 2.41
123 125 3.242608 ACACACGCACACAGAAACATAAC 60.243 43.478 0.00 0.00 0.00 1.89
156 158 2.938451 CAATCACACACACAGACACACT 59.062 45.455 0.00 0.00 0.00 3.55
237 261 3.149196 ACACCATCGATCTGCTTGTTTT 58.851 40.909 0.00 0.00 0.00 2.43
304 330 7.038729 TCCTATGACTAGGGAATTTGCAGATAG 60.039 40.741 0.00 0.00 44.22 2.08
311 337 6.098982 ACAGACTCCTATGACTAGGGAATTTG 59.901 42.308 0.00 0.00 44.22 2.32
343 369 7.381678 CCATGCTCTTTTTCTCTCTTTTTGAAG 59.618 37.037 0.00 0.00 0.00 3.02
353 383 5.182760 GTGAACATCCATGCTCTTTTTCTCT 59.817 40.000 0.00 0.00 0.00 3.10
392 428 0.390472 GACGAGGCAGGAGAACCTTG 60.390 60.000 0.00 0.00 45.36 3.61
434 470 5.627499 TTATGATTTGTCTGACTGGTTGC 57.373 39.130 9.51 0.00 0.00 4.17
467 503 2.096218 GGCTAAAACGACTGCAACAGAG 60.096 50.000 0.78 0.00 35.18 3.35
562 793 7.281774 GCAGACCAATCAGATTTGATCTCTTAA 59.718 37.037 0.00 0.00 43.20 1.85
657 889 4.191544 ACACATATCAACTCCACGGATTG 58.808 43.478 0.00 0.00 0.00 2.67
695 927 1.195900 GTGTACATCGAAAAGCGCCAA 59.804 47.619 2.29 0.00 40.61 4.52
697 929 0.096454 GGTGTACATCGAAAAGCGCC 59.904 55.000 2.29 0.00 40.61 6.53
702 934 9.146984 CAAGAGTATTTAGGTGTACATCGAAAA 57.853 33.333 16.80 13.59 0.00 2.29
706 963 8.380644 CAAACAAGAGTATTTAGGTGTACATCG 58.619 37.037 0.00 0.00 0.00 3.84
824 1082 9.601217 CTTGAGTATTTACCAGTTAATGTAGCT 57.399 33.333 0.00 0.00 0.00 3.32
879 1137 4.273480 AGAGATGTTCTTCCAACACAAACG 59.727 41.667 0.00 0.00 29.61 3.60
883 1141 4.780815 ACAAGAGATGTTCTTCCAACACA 58.219 39.130 0.00 0.00 44.34 3.72
898 1156 5.243060 TCTGACCATACGAAGAAACAAGAGA 59.757 40.000 0.00 0.00 0.00 3.10
949 1208 5.187621 ACAGCTTATTTAAACAGGGCCTA 57.812 39.130 5.28 0.00 0.00 3.93
987 1246 4.730613 GCGTCAGCCATTTATGTTAACTGG 60.731 45.833 7.22 6.80 37.42 4.00
996 1255 0.532862 CCTCCGCGTCAGCCATTTAT 60.533 55.000 4.92 0.00 41.18 1.40
1525 1841 5.777732 CCCACTAGCATATAGAGAAAGGACT 59.222 44.000 0.00 0.00 0.00 3.85
1615 2009 6.035435 CAGTTTGTTCCTACTCGATGAAGATG 59.965 42.308 0.00 0.00 0.00 2.90
1707 2190 3.425578 GTGACTGACACCATCTCCG 57.574 57.895 0.00 0.00 43.05 4.63
2370 2853 5.518848 TCTGCACAAGAAATGAACATGTT 57.481 34.783 11.78 11.78 29.54 2.71
2377 2860 3.753815 TCCACATCTGCACAAGAAATGA 58.246 40.909 0.00 0.00 38.79 2.57
2462 2945 5.927689 GCATGGAGAATAGATCTGAAGACAG 59.072 44.000 5.18 0.00 44.66 3.51
2467 2950 6.296087 GGGTATGCATGGAGAATAGATCTGAA 60.296 42.308 10.16 0.00 38.96 3.02
2473 2956 4.660303 ACAAGGGTATGCATGGAGAATAGA 59.340 41.667 10.16 0.00 0.00 1.98
2638 3123 2.202570 CAGCGAGTAACGGACCCG 60.203 66.667 6.94 6.94 46.03 5.28
2639 3124 2.183555 CCAGCGAGTAACGGACCC 59.816 66.667 0.00 0.00 42.83 4.46
2640 3125 2.183555 CCCAGCGAGTAACGGACC 59.816 66.667 0.00 0.00 42.83 4.46
2641 3126 2.508663 GCCCAGCGAGTAACGGAC 60.509 66.667 0.00 0.00 42.83 4.79
2657 3142 3.497932 CTCAGGCAGAAGCAGCGC 61.498 66.667 0.00 0.00 44.61 5.92
2683 3168 6.150140 AGCCATACAGAGAAAGATCAAACAAC 59.850 38.462 0.00 0.00 0.00 3.32
2684 3169 6.240894 AGCCATACAGAGAAAGATCAAACAA 58.759 36.000 0.00 0.00 0.00 2.83
2699 3184 0.889994 TGCCAAGCAAAGCCATACAG 59.110 50.000 0.00 0.00 34.76 2.74
2725 3210 0.886490 CAGAAGTGGGACGCAAAGCT 60.886 55.000 0.00 0.00 44.14 3.74
2727 3212 0.868406 GACAGAAGTGGGACGCAAAG 59.132 55.000 0.00 0.00 44.14 2.77
2743 3228 0.250467 GCTGGTCAAAGCCTCTGACA 60.250 55.000 0.00 0.00 44.16 3.58
2744 3229 0.036022 AGCTGGTCAAAGCCTCTGAC 59.964 55.000 0.00 0.00 44.68 3.51
2747 3232 1.303155 GCAGCTGGTCAAAGCCTCT 60.303 57.895 17.12 0.00 44.68 3.69
2748 3233 1.303155 AGCAGCTGGTCAAAGCCTC 60.303 57.895 13.85 0.00 44.68 4.70
2801 3286 8.999431 GTGTGATTATACTCAACAAAAAGGAGA 58.001 33.333 0.00 0.00 33.00 3.71
2846 3331 7.652507 GGGAAAAGTAGTACAGTATATGCTCAC 59.347 40.741 2.52 0.00 0.00 3.51
2859 3344 4.450080 CGGTTCAGTTGGGAAAAGTAGTAC 59.550 45.833 0.00 0.00 0.00 2.73
2860 3345 4.344679 TCGGTTCAGTTGGGAAAAGTAGTA 59.655 41.667 0.00 0.00 0.00 1.82
2902 3387 2.945668 GCAATAACTACTCCCTGGCTTG 59.054 50.000 0.00 0.00 0.00 4.01
2944 3429 1.893808 CCGTTGCTGGACTGCTGTT 60.894 57.895 0.00 0.00 0.00 3.16
2996 3482 5.748152 GTGTGTGAATAACATTGTTGCAACT 59.252 36.000 28.61 11.97 41.97 3.16
3011 3497 8.985315 ATATGAATTCCTGTATGTGTGTGAAT 57.015 30.769 2.27 0.00 0.00 2.57
3014 3500 7.224557 TCGAATATGAATTCCTGTATGTGTGTG 59.775 37.037 2.27 0.00 38.66 3.82
3015 3501 7.272244 TCGAATATGAATTCCTGTATGTGTGT 58.728 34.615 2.27 0.00 38.66 3.72
3016 3502 7.095481 CCTCGAATATGAATTCCTGTATGTGTG 60.095 40.741 2.27 0.00 38.66 3.82
3017 3503 6.931281 CCTCGAATATGAATTCCTGTATGTGT 59.069 38.462 2.27 0.00 38.66 3.72
3018 3504 7.154656 TCCTCGAATATGAATTCCTGTATGTG 58.845 38.462 2.27 0.00 38.66 3.21
3019 3505 7.303182 TCCTCGAATATGAATTCCTGTATGT 57.697 36.000 2.27 0.00 38.66 2.29
3020 3506 7.332926 CCTTCCTCGAATATGAATTCCTGTATG 59.667 40.741 2.27 0.00 38.66 2.39
3021 3507 7.235606 TCCTTCCTCGAATATGAATTCCTGTAT 59.764 37.037 2.27 0.00 38.66 2.29
3022 3508 6.553476 TCCTTCCTCGAATATGAATTCCTGTA 59.447 38.462 2.27 0.00 38.66 2.74
3023 3509 5.366768 TCCTTCCTCGAATATGAATTCCTGT 59.633 40.000 2.27 0.00 38.66 4.00
3024 3510 5.858381 TCCTTCCTCGAATATGAATTCCTG 58.142 41.667 2.27 0.00 38.66 3.86
3025 3511 6.465035 CCTTCCTTCCTCGAATATGAATTCCT 60.465 42.308 2.27 0.00 38.66 3.36
3026 3512 5.703130 CCTTCCTTCCTCGAATATGAATTCC 59.297 44.000 2.27 0.00 38.66 3.01
3027 3513 5.703130 CCCTTCCTTCCTCGAATATGAATTC 59.297 44.000 0.00 0.00 38.53 2.17
3028 3514 5.369699 TCCCTTCCTTCCTCGAATATGAATT 59.630 40.000 0.00 0.00 0.00 2.17
3029 3515 4.907875 TCCCTTCCTTCCTCGAATATGAAT 59.092 41.667 0.00 0.00 0.00 2.57
3030 3516 4.295201 TCCCTTCCTTCCTCGAATATGAA 58.705 43.478 0.00 0.00 0.00 2.57
3031 3517 3.898123 CTCCCTTCCTTCCTCGAATATGA 59.102 47.826 0.00 0.00 0.00 2.15
3032 3518 3.007398 CCTCCCTTCCTTCCTCGAATATG 59.993 52.174 0.00 0.00 0.00 1.78
3033 3519 3.243724 CCTCCCTTCCTTCCTCGAATAT 58.756 50.000 0.00 0.00 0.00 1.28
3034 3520 2.023307 ACCTCCCTTCCTTCCTCGAATA 60.023 50.000 0.00 0.00 0.00 1.75
3035 3521 1.273896 ACCTCCCTTCCTTCCTCGAAT 60.274 52.381 0.00 0.00 0.00 3.34
3036 3522 0.116541 ACCTCCCTTCCTTCCTCGAA 59.883 55.000 0.00 0.00 0.00 3.71
3037 3523 1.005228 TACCTCCCTTCCTTCCTCGA 58.995 55.000 0.00 0.00 0.00 4.04
3038 3524 1.112950 GTACCTCCCTTCCTTCCTCG 58.887 60.000 0.00 0.00 0.00 4.63
3039 3525 1.112950 CGTACCTCCCTTCCTTCCTC 58.887 60.000 0.00 0.00 0.00 3.71
3040 3526 0.412640 ACGTACCTCCCTTCCTTCCT 59.587 55.000 0.00 0.00 0.00 3.36
3041 3527 2.030371 CTACGTACCTCCCTTCCTTCC 58.970 57.143 0.00 0.00 0.00 3.46
3042 3528 2.030371 CCTACGTACCTCCCTTCCTTC 58.970 57.143 0.00 0.00 0.00 3.46
3043 3529 1.642762 TCCTACGTACCTCCCTTCCTT 59.357 52.381 0.00 0.00 0.00 3.36
3044 3530 1.302907 TCCTACGTACCTCCCTTCCT 58.697 55.000 0.00 0.00 0.00 3.36
3045 3531 2.149973 TTCCTACGTACCTCCCTTCC 57.850 55.000 0.00 0.00 0.00 3.46
3046 3532 5.075493 TGATATTCCTACGTACCTCCCTTC 58.925 45.833 0.00 0.00 0.00 3.46
3047 3533 5.070823 TGATATTCCTACGTACCTCCCTT 57.929 43.478 0.00 0.00 0.00 3.95
3048 3534 4.353191 TCTGATATTCCTACGTACCTCCCT 59.647 45.833 0.00 0.00 0.00 4.20
3049 3535 4.660168 TCTGATATTCCTACGTACCTCCC 58.340 47.826 0.00 0.00 0.00 4.30
3050 3536 5.393243 GCATCTGATATTCCTACGTACCTCC 60.393 48.000 0.00 0.00 0.00 4.30
3051 3537 5.416326 AGCATCTGATATTCCTACGTACCTC 59.584 44.000 0.00 0.00 0.00 3.85
3052 3538 5.184096 CAGCATCTGATATTCCTACGTACCT 59.816 44.000 0.00 0.00 32.44 3.08
3053 3539 5.183331 TCAGCATCTGATATTCCTACGTACC 59.817 44.000 0.00 0.00 35.39 3.34
3054 3540 6.255596 TCAGCATCTGATATTCCTACGTAC 57.744 41.667 0.00 0.00 35.39 3.67
3055 3541 5.106118 GCTCAGCATCTGATATTCCTACGTA 60.106 44.000 0.00 0.00 39.92 3.57
3056 3542 4.321601 GCTCAGCATCTGATATTCCTACGT 60.322 45.833 0.00 0.00 39.92 3.57
3057 3543 4.082300 AGCTCAGCATCTGATATTCCTACG 60.082 45.833 0.00 0.00 39.92 3.51
3058 3544 5.170021 CAGCTCAGCATCTGATATTCCTAC 58.830 45.833 0.00 0.00 39.92 3.18
3059 3545 4.837298 ACAGCTCAGCATCTGATATTCCTA 59.163 41.667 0.00 0.00 39.92 2.94
3060 3546 3.647113 ACAGCTCAGCATCTGATATTCCT 59.353 43.478 0.00 0.00 39.92 3.36
3061 3547 4.005487 ACAGCTCAGCATCTGATATTCC 57.995 45.455 0.00 0.00 39.92 3.01
3062 3548 6.023357 TCTACAGCTCAGCATCTGATATTC 57.977 41.667 0.00 0.00 39.92 1.75
3063 3549 5.047164 CCTCTACAGCTCAGCATCTGATATT 60.047 44.000 0.00 0.00 39.92 1.28
3064 3550 4.463539 CCTCTACAGCTCAGCATCTGATAT 59.536 45.833 0.00 0.00 39.92 1.63
3065 3551 3.825585 CCTCTACAGCTCAGCATCTGATA 59.174 47.826 0.00 0.00 39.92 2.15
3066 3552 2.629137 CCTCTACAGCTCAGCATCTGAT 59.371 50.000 0.00 0.00 39.92 2.90
3067 3553 2.030371 CCTCTACAGCTCAGCATCTGA 58.970 52.381 0.00 0.00 38.25 3.27
3068 3554 1.755959 ACCTCTACAGCTCAGCATCTG 59.244 52.381 0.00 0.00 36.45 2.90
3069 3555 2.031120 GACCTCTACAGCTCAGCATCT 58.969 52.381 0.00 0.00 0.00 2.90
3070 3556 1.753649 TGACCTCTACAGCTCAGCATC 59.246 52.381 0.00 0.00 0.00 3.91
3071 3557 1.857965 TGACCTCTACAGCTCAGCAT 58.142 50.000 0.00 0.00 0.00 3.79
3072 3558 1.632589 TTGACCTCTACAGCTCAGCA 58.367 50.000 0.00 0.00 0.00 4.41
3073 3559 2.232452 TCTTTGACCTCTACAGCTCAGC 59.768 50.000 0.00 0.00 0.00 4.26
3074 3560 3.119173 CCTCTTTGACCTCTACAGCTCAG 60.119 52.174 0.00 0.00 0.00 3.35
3075 3561 2.828520 CCTCTTTGACCTCTACAGCTCA 59.171 50.000 0.00 0.00 0.00 4.26
3076 3562 3.093057 TCCTCTTTGACCTCTACAGCTC 58.907 50.000 0.00 0.00 0.00 4.09
3077 3563 3.176924 TCCTCTTTGACCTCTACAGCT 57.823 47.619 0.00 0.00 0.00 4.24
3078 3564 3.963428 TTCCTCTTTGACCTCTACAGC 57.037 47.619 0.00 0.00 0.00 4.40
3079 3565 5.799213 ACATTTCCTCTTTGACCTCTACAG 58.201 41.667 0.00 0.00 0.00 2.74
3080 3566 5.825593 ACATTTCCTCTTTGACCTCTACA 57.174 39.130 0.00 0.00 0.00 2.74
3081 3567 6.468543 AGAACATTTCCTCTTTGACCTCTAC 58.531 40.000 0.00 0.00 0.00 2.59
3082 3568 6.498651 AGAGAACATTTCCTCTTTGACCTCTA 59.501 38.462 0.00 0.00 36.42 2.43
3083 3569 5.309282 AGAGAACATTTCCTCTTTGACCTCT 59.691 40.000 0.00 0.00 36.42 3.69
3084 3570 5.555966 AGAGAACATTTCCTCTTTGACCTC 58.444 41.667 0.00 0.00 36.42 3.85
3085 3571 5.309282 AGAGAGAACATTTCCTCTTTGACCT 59.691 40.000 0.00 0.00 39.64 3.85
3086 3572 5.555966 AGAGAGAACATTTCCTCTTTGACC 58.444 41.667 0.00 0.00 39.64 4.02
3087 3573 7.382898 ACTAGAGAGAACATTTCCTCTTTGAC 58.617 38.462 0.00 0.00 39.64 3.18
3088 3574 7.546250 ACTAGAGAGAACATTTCCTCTTTGA 57.454 36.000 0.00 0.00 39.64 2.69
3089 3575 6.529829 CGACTAGAGAGAACATTTCCTCTTTG 59.470 42.308 0.00 7.93 39.64 2.77
3090 3576 6.626302 CGACTAGAGAGAACATTTCCTCTTT 58.374 40.000 0.00 0.00 39.64 2.52
3091 3577 5.393678 GCGACTAGAGAGAACATTTCCTCTT 60.394 44.000 0.00 0.00 39.64 2.85
3092 3578 4.097286 GCGACTAGAGAGAACATTTCCTCT 59.903 45.833 0.00 0.00 42.01 3.69
3093 3579 4.356289 GCGACTAGAGAGAACATTTCCTC 58.644 47.826 0.00 0.00 0.00 3.71
3094 3580 3.131400 GGCGACTAGAGAGAACATTTCCT 59.869 47.826 0.00 0.00 0.00 3.36
3095 3581 3.449632 GGCGACTAGAGAGAACATTTCC 58.550 50.000 0.00 0.00 0.00 3.13
3096 3582 3.449632 GGGCGACTAGAGAGAACATTTC 58.550 50.000 0.00 0.00 0.00 2.17
3097 3583 2.168728 GGGGCGACTAGAGAGAACATTT 59.831 50.000 0.00 0.00 0.00 2.32
3098 3584 1.757699 GGGGCGACTAGAGAGAACATT 59.242 52.381 0.00 0.00 0.00 2.71
3099 3585 1.404843 GGGGCGACTAGAGAGAACAT 58.595 55.000 0.00 0.00 0.00 2.71
3100 3586 0.683504 GGGGGCGACTAGAGAGAACA 60.684 60.000 0.00 0.00 0.00 3.18
3101 3587 2.117257 GGGGGCGACTAGAGAGAAC 58.883 63.158 0.00 0.00 0.00 3.01
3102 3588 4.680487 GGGGGCGACTAGAGAGAA 57.320 61.111 0.00 0.00 0.00 2.87
3123 3609 3.672295 GACGAGGGCAAGCAGAGGG 62.672 68.421 0.00 0.00 0.00 4.30
3124 3610 2.125350 GACGAGGGCAAGCAGAGG 60.125 66.667 0.00 0.00 0.00 3.69
3125 3611 0.321122 AAAGACGAGGGCAAGCAGAG 60.321 55.000 0.00 0.00 0.00 3.35
3126 3612 0.108585 AAAAGACGAGGGCAAGCAGA 59.891 50.000 0.00 0.00 0.00 4.26
3127 3613 1.808411 TAAAAGACGAGGGCAAGCAG 58.192 50.000 0.00 0.00 0.00 4.24
3128 3614 2.027192 AGATAAAAGACGAGGGCAAGCA 60.027 45.455 0.00 0.00 0.00 3.91
3129 3615 2.609916 GAGATAAAAGACGAGGGCAAGC 59.390 50.000 0.00 0.00 0.00 4.01
3130 3616 4.130286 AGAGATAAAAGACGAGGGCAAG 57.870 45.455 0.00 0.00 0.00 4.01
3131 3617 4.553330 AAGAGATAAAAGACGAGGGCAA 57.447 40.909 0.00 0.00 0.00 4.52
3132 3618 4.504858 GAAAGAGATAAAAGACGAGGGCA 58.495 43.478 0.00 0.00 0.00 5.36
3133 3619 3.872182 GGAAAGAGATAAAAGACGAGGGC 59.128 47.826 0.00 0.00 0.00 5.19
3134 3620 4.162509 AGGGAAAGAGATAAAAGACGAGGG 59.837 45.833 0.00 0.00 0.00 4.30
3135 3621 5.346181 AGGGAAAGAGATAAAAGACGAGG 57.654 43.478 0.00 0.00 0.00 4.63
3136 3622 7.100409 AGAAAGGGAAAGAGATAAAAGACGAG 58.900 38.462 0.00 0.00 0.00 4.18
3137 3623 7.005709 AGAAAGGGAAAGAGATAAAAGACGA 57.994 36.000 0.00 0.00 0.00 4.20
3138 3624 7.009357 CGTAGAAAGGGAAAGAGATAAAAGACG 59.991 40.741 0.00 0.00 0.00 4.18
3139 3625 8.033626 TCGTAGAAAGGGAAAGAGATAAAAGAC 58.966 37.037 0.00 0.00 0.00 3.01
3140 3626 8.130671 TCGTAGAAAGGGAAAGAGATAAAAGA 57.869 34.615 0.00 0.00 0.00 2.52
3141 3627 7.492994 CCTCGTAGAAAGGGAAAGAGATAAAAG 59.507 40.741 0.00 0.00 34.09 2.27
3142 3628 7.038516 ACCTCGTAGAAAGGGAAAGAGATAAAA 60.039 37.037 0.00 0.00 38.29 1.52
3143 3629 6.439692 ACCTCGTAGAAAGGGAAAGAGATAAA 59.560 38.462 0.00 0.00 38.29 1.40
3144 3630 5.956563 ACCTCGTAGAAAGGGAAAGAGATAA 59.043 40.000 0.00 0.00 38.29 1.75
3145 3631 5.516984 ACCTCGTAGAAAGGGAAAGAGATA 58.483 41.667 0.00 0.00 38.29 1.98
3146 3632 4.354662 ACCTCGTAGAAAGGGAAAGAGAT 58.645 43.478 0.00 0.00 38.29 2.75
3147 3633 3.775910 ACCTCGTAGAAAGGGAAAGAGA 58.224 45.455 0.00 0.00 38.29 3.10
3148 3634 4.021368 TCAACCTCGTAGAAAGGGAAAGAG 60.021 45.833 0.00 0.00 38.29 2.85
3149 3635 3.899360 TCAACCTCGTAGAAAGGGAAAGA 59.101 43.478 0.00 0.00 38.29 2.52
3150 3636 4.267349 TCAACCTCGTAGAAAGGGAAAG 57.733 45.455 0.00 0.00 38.29 2.62
3151 3637 4.693042 TTCAACCTCGTAGAAAGGGAAA 57.307 40.909 0.00 0.00 38.29 3.13
3152 3638 4.638304 CTTTCAACCTCGTAGAAAGGGAA 58.362 43.478 0.00 0.00 42.65 3.97
3153 3639 4.267349 CTTTCAACCTCGTAGAAAGGGA 57.733 45.455 0.00 0.00 42.65 4.20
3156 3642 5.539048 TCTTCCTTTCAACCTCGTAGAAAG 58.461 41.667 0.00 0.00 44.75 2.62
3157 3643 5.303589 TCTCTTCCTTTCAACCTCGTAGAAA 59.696 40.000 0.00 0.00 34.09 2.52
3158 3644 4.831155 TCTCTTCCTTTCAACCTCGTAGAA 59.169 41.667 0.00 0.00 34.09 2.10
3159 3645 4.404640 TCTCTTCCTTTCAACCTCGTAGA 58.595 43.478 0.00 0.00 0.00 2.59
3160 3646 4.785511 TCTCTTCCTTTCAACCTCGTAG 57.214 45.455 0.00 0.00 0.00 3.51
3161 3647 6.380274 ACATATCTCTTCCTTTCAACCTCGTA 59.620 38.462 0.00 0.00 0.00 3.43
3162 3648 5.187967 ACATATCTCTTCCTTTCAACCTCGT 59.812 40.000 0.00 0.00 0.00 4.18
3163 3649 5.521735 CACATATCTCTTCCTTTCAACCTCG 59.478 44.000 0.00 0.00 0.00 4.63
3164 3650 5.819901 CCACATATCTCTTCCTTTCAACCTC 59.180 44.000 0.00 0.00 0.00 3.85
3165 3651 5.749462 CCACATATCTCTTCCTTTCAACCT 58.251 41.667 0.00 0.00 0.00 3.50
3166 3652 4.336713 GCCACATATCTCTTCCTTTCAACC 59.663 45.833 0.00 0.00 0.00 3.77
3167 3653 5.189180 AGCCACATATCTCTTCCTTTCAAC 58.811 41.667 0.00 0.00 0.00 3.18
3168 3654 5.441718 AGCCACATATCTCTTCCTTTCAA 57.558 39.130 0.00 0.00 0.00 2.69
3169 3655 5.453903 GCTAGCCACATATCTCTTCCTTTCA 60.454 44.000 2.29 0.00 0.00 2.69
3170 3656 4.994217 GCTAGCCACATATCTCTTCCTTTC 59.006 45.833 2.29 0.00 0.00 2.62
3171 3657 4.202409 GGCTAGCCACATATCTCTTCCTTT 60.202 45.833 29.33 0.00 35.81 3.11
3172 3658 3.326297 GGCTAGCCACATATCTCTTCCTT 59.674 47.826 29.33 0.00 35.81 3.36
3173 3659 2.903135 GGCTAGCCACATATCTCTTCCT 59.097 50.000 29.33 0.00 35.81 3.36
3174 3660 2.353208 CGGCTAGCCACATATCTCTTCC 60.353 54.545 32.47 1.12 35.37 3.46
3175 3661 2.297597 ACGGCTAGCCACATATCTCTTC 59.702 50.000 32.47 1.58 35.37 2.87
3176 3662 2.320781 ACGGCTAGCCACATATCTCTT 58.679 47.619 32.47 0.99 35.37 2.85
3177 3663 2.002505 ACGGCTAGCCACATATCTCT 57.997 50.000 32.47 0.69 35.37 3.10
3178 3664 2.557056 TGTACGGCTAGCCACATATCTC 59.443 50.000 32.47 13.57 35.37 2.75
3179 3665 2.594131 TGTACGGCTAGCCACATATCT 58.406 47.619 32.47 8.29 35.37 1.98
3180 3666 3.254060 CATGTACGGCTAGCCACATATC 58.746 50.000 29.53 16.53 32.92 1.63
3181 3667 2.612972 GCATGTACGGCTAGCCACATAT 60.613 50.000 29.53 19.34 32.92 1.78
3182 3668 1.270094 GCATGTACGGCTAGCCACATA 60.270 52.381 29.53 18.71 32.92 2.29
3183 3669 0.532862 GCATGTACGGCTAGCCACAT 60.533 55.000 32.47 29.05 34.35 3.21
3184 3670 1.153449 GCATGTACGGCTAGCCACA 60.153 57.895 32.47 28.22 35.37 4.17
3185 3671 1.887707 GGCATGTACGGCTAGCCAC 60.888 63.158 32.47 23.70 44.59 5.01
3186 3672 2.504032 GGCATGTACGGCTAGCCA 59.496 61.111 32.47 14.42 44.59 4.75
3187 3673 0.319641 GTAGGCATGTACGGCTAGCC 60.320 60.000 24.75 24.75 43.91 3.93
3188 3674 3.196613 GTAGGCATGTACGGCTAGC 57.803 57.895 6.04 6.04 43.91 3.42
3189 3675 1.037493 TGGTAGGCATGTACGGCTAG 58.963 55.000 8.93 0.00 43.91 3.42
3190 3676 1.487300 TTGGTAGGCATGTACGGCTA 58.513 50.000 8.93 4.87 42.62 3.93
3191 3677 0.616371 TTTGGTAGGCATGTACGGCT 59.384 50.000 8.93 5.79 45.09 5.52
3192 3678 1.675552 ATTTGGTAGGCATGTACGGC 58.324 50.000 0.00 0.95 0.00 5.68
3193 3679 3.275143 TGAATTTGGTAGGCATGTACGG 58.725 45.455 0.00 0.00 0.00 4.02
3194 3680 4.188462 TCTGAATTTGGTAGGCATGTACG 58.812 43.478 0.00 0.00 0.00 3.67
3195 3681 5.428253 TCTCTGAATTTGGTAGGCATGTAC 58.572 41.667 0.00 0.00 0.00 2.90
3196 3682 5.692115 TCTCTGAATTTGGTAGGCATGTA 57.308 39.130 0.00 0.00 0.00 2.29
3197 3683 4.574674 TCTCTGAATTTGGTAGGCATGT 57.425 40.909 0.00 0.00 0.00 3.21
3198 3684 7.500227 TCTTTATCTCTGAATTTGGTAGGCATG 59.500 37.037 0.00 0.00 0.00 4.06
3199 3685 7.577303 TCTTTATCTCTGAATTTGGTAGGCAT 58.423 34.615 0.00 0.00 0.00 4.40
3200 3686 6.957631 TCTTTATCTCTGAATTTGGTAGGCA 58.042 36.000 0.00 0.00 0.00 4.75
3201 3687 7.865706 TTCTTTATCTCTGAATTTGGTAGGC 57.134 36.000 0.00 0.00 0.00 3.93
3219 3705 9.379791 GCTGGTAGTCTAGCTAAATTTTCTTTA 57.620 33.333 10.31 0.00 43.36 1.85
3220 3706 8.270080 GCTGGTAGTCTAGCTAAATTTTCTTT 57.730 34.615 10.31 0.00 43.36 2.52
3221 3707 7.851387 GCTGGTAGTCTAGCTAAATTTTCTT 57.149 36.000 10.31 0.00 43.36 2.52
3232 3718 1.335496 CTCGGAAGCTGGTAGTCTAGC 59.665 57.143 1.92 1.92 46.33 3.42
3233 3719 2.645802 ACTCGGAAGCTGGTAGTCTAG 58.354 52.381 0.00 0.00 0.00 2.43
3234 3720 2.803030 ACTCGGAAGCTGGTAGTCTA 57.197 50.000 0.00 0.00 0.00 2.59
3235 3721 1.926108 AACTCGGAAGCTGGTAGTCT 58.074 50.000 0.00 0.00 0.00 3.24
3236 3722 2.231721 AGAAACTCGGAAGCTGGTAGTC 59.768 50.000 0.00 0.00 0.00 2.59
3237 3723 2.249139 AGAAACTCGGAAGCTGGTAGT 58.751 47.619 0.00 0.00 0.00 2.73
3238 3724 3.056465 AGAAGAAACTCGGAAGCTGGTAG 60.056 47.826 0.00 0.00 0.00 3.18
3239 3725 2.897969 AGAAGAAACTCGGAAGCTGGTA 59.102 45.455 0.00 0.00 0.00 3.25
3240 3726 1.694696 AGAAGAAACTCGGAAGCTGGT 59.305 47.619 0.00 0.00 0.00 4.00
3241 3727 2.342179 GAGAAGAAACTCGGAAGCTGG 58.658 52.381 0.00 0.00 0.00 4.85
3242 3728 2.028567 AGGAGAAGAAACTCGGAAGCTG 60.029 50.000 0.00 0.00 37.74 4.24
3243 3729 2.252714 AGGAGAAGAAACTCGGAAGCT 58.747 47.619 0.00 0.00 37.74 3.74
3244 3730 2.753055 AGGAGAAGAAACTCGGAAGC 57.247 50.000 0.00 0.00 37.74 3.86
3245 3731 4.703093 AGTCTAGGAGAAGAAACTCGGAAG 59.297 45.833 0.00 0.00 37.74 3.46
3246 3732 4.664392 AGTCTAGGAGAAGAAACTCGGAA 58.336 43.478 0.00 0.00 37.74 4.30
3247 3733 4.263374 TGAGTCTAGGAGAAGAAACTCGGA 60.263 45.833 0.00 0.00 37.74 4.55
3248 3734 4.011023 TGAGTCTAGGAGAAGAAACTCGG 58.989 47.826 0.00 0.00 37.74 4.63
3249 3735 5.828299 ATGAGTCTAGGAGAAGAAACTCG 57.172 43.478 0.00 0.00 37.74 4.18
3250 3736 9.930693 TTTTTATGAGTCTAGGAGAAGAAACTC 57.069 33.333 0.00 0.00 36.31 3.01
3274 3760 5.379187 AGATTTTGAAGCCTGCCAATTTTT 58.621 33.333 0.00 0.00 0.00 1.94
3275 3761 4.976864 AGATTTTGAAGCCTGCCAATTTT 58.023 34.783 0.00 0.00 0.00 1.82
3276 3762 4.628963 AGATTTTGAAGCCTGCCAATTT 57.371 36.364 0.00 0.00 0.00 1.82
3277 3763 4.628963 AAGATTTTGAAGCCTGCCAATT 57.371 36.364 0.00 0.00 0.00 2.32
3278 3764 4.628963 AAAGATTTTGAAGCCTGCCAAT 57.371 36.364 0.00 0.00 0.00 3.16
3279 3765 4.101430 AGAAAAGATTTTGAAGCCTGCCAA 59.899 37.500 0.00 0.00 0.00 4.52
3280 3766 3.642848 AGAAAAGATTTTGAAGCCTGCCA 59.357 39.130 0.00 0.00 0.00 4.92
3281 3767 4.240888 GAGAAAAGATTTTGAAGCCTGCC 58.759 43.478 0.00 0.00 0.00 4.85
3282 3768 4.021632 AGGAGAAAAGATTTTGAAGCCTGC 60.022 41.667 0.00 0.00 0.00 4.85
3283 3769 5.718724 AGGAGAAAAGATTTTGAAGCCTG 57.281 39.130 0.00 0.00 0.00 4.85
3284 3770 6.784031 TCTAGGAGAAAAGATTTTGAAGCCT 58.216 36.000 0.00 0.00 0.00 4.58
3285 3771 7.454260 TTCTAGGAGAAAAGATTTTGAAGCC 57.546 36.000 0.00 0.00 29.99 4.35
3286 3772 9.566530 GAATTCTAGGAGAAAAGATTTTGAAGC 57.433 33.333 0.00 0.00 37.82 3.86
3292 3778 8.940952 CGAGTTGAATTCTAGGAGAAAAGATTT 58.059 33.333 7.05 0.00 37.82 2.17
3293 3779 7.065204 GCGAGTTGAATTCTAGGAGAAAAGATT 59.935 37.037 7.05 0.00 37.82 2.40
3294 3780 6.536941 GCGAGTTGAATTCTAGGAGAAAAGAT 59.463 38.462 7.05 0.00 37.82 2.40
3295 3781 5.869888 GCGAGTTGAATTCTAGGAGAAAAGA 59.130 40.000 7.05 0.00 37.82 2.52
3296 3782 5.220303 CGCGAGTTGAATTCTAGGAGAAAAG 60.220 44.000 0.00 0.00 37.82 2.27
3297 3783 4.625742 CGCGAGTTGAATTCTAGGAGAAAA 59.374 41.667 0.00 0.00 37.82 2.29
3298 3784 4.174009 CGCGAGTTGAATTCTAGGAGAAA 58.826 43.478 0.00 0.00 37.82 2.52
3299 3785 3.428999 CCGCGAGTTGAATTCTAGGAGAA 60.429 47.826 8.23 0.00 38.78 2.87
3300 3786 2.099263 CCGCGAGTTGAATTCTAGGAGA 59.901 50.000 8.23 0.00 0.00 3.71
3301 3787 2.099263 TCCGCGAGTTGAATTCTAGGAG 59.901 50.000 8.23 0.00 0.00 3.69
3302 3788 2.097036 TCCGCGAGTTGAATTCTAGGA 58.903 47.619 8.23 0.00 0.00 2.94
3303 3789 2.579207 TCCGCGAGTTGAATTCTAGG 57.421 50.000 8.23 0.00 0.00 3.02
3304 3790 4.146616 CGTTATCCGCGAGTTGAATTCTAG 59.853 45.833 8.23 0.00 0.00 2.43
3305 3791 4.039703 CGTTATCCGCGAGTTGAATTCTA 58.960 43.478 8.23 0.00 0.00 2.10
3306 3792 2.858344 CGTTATCCGCGAGTTGAATTCT 59.142 45.455 8.23 0.00 0.00 2.40
3307 3793 2.855963 TCGTTATCCGCGAGTTGAATTC 59.144 45.455 8.23 0.00 36.19 2.17
3308 3794 2.883574 TCGTTATCCGCGAGTTGAATT 58.116 42.857 8.23 0.00 36.19 2.17
3309 3795 2.572191 TCGTTATCCGCGAGTTGAAT 57.428 45.000 8.23 0.00 36.19 2.57
3310 3796 2.572191 ATCGTTATCCGCGAGTTGAA 57.428 45.000 8.23 0.00 41.83 2.69
3311 3797 2.190161 CAATCGTTATCCGCGAGTTGA 58.810 47.619 8.23 0.00 41.83 3.18
3312 3798 1.332028 GCAATCGTTATCCGCGAGTTG 60.332 52.381 8.23 1.71 41.83 3.16
3313 3799 0.928229 GCAATCGTTATCCGCGAGTT 59.072 50.000 8.23 0.00 41.83 3.01
3314 3800 0.179121 TGCAATCGTTATCCGCGAGT 60.179 50.000 8.23 0.00 41.83 4.18
3315 3801 1.136529 CATGCAATCGTTATCCGCGAG 60.137 52.381 8.23 0.00 41.83 5.03
3316 3802 0.858583 CATGCAATCGTTATCCGCGA 59.141 50.000 8.23 0.00 42.75 5.87
3317 3803 0.581529 ACATGCAATCGTTATCCGCG 59.418 50.000 0.00 0.00 36.19 6.46
3318 3804 2.755836 AACATGCAATCGTTATCCGC 57.244 45.000 0.00 0.00 36.19 5.54
3319 3805 4.033932 TGAGAAACATGCAATCGTTATCCG 59.966 41.667 0.00 0.00 38.13 4.18
3320 3806 5.065218 AGTGAGAAACATGCAATCGTTATCC 59.935 40.000 0.00 0.00 0.00 2.59
3321 3807 5.961843 CAGTGAGAAACATGCAATCGTTATC 59.038 40.000 0.00 0.00 0.00 1.75
3322 3808 5.412594 ACAGTGAGAAACATGCAATCGTTAT 59.587 36.000 0.00 0.00 0.00 1.89
3323 3809 4.754618 ACAGTGAGAAACATGCAATCGTTA 59.245 37.500 0.00 0.00 0.00 3.18
3324 3810 3.565482 ACAGTGAGAAACATGCAATCGTT 59.435 39.130 0.00 0.00 0.00 3.85
3325 3811 3.058708 CACAGTGAGAAACATGCAATCGT 60.059 43.478 0.00 0.00 0.00 3.73
3326 3812 3.058708 ACACAGTGAGAAACATGCAATCG 60.059 43.478 7.81 0.00 0.00 3.34
3327 3813 4.494350 ACACAGTGAGAAACATGCAATC 57.506 40.909 7.81 0.00 0.00 2.67
3328 3814 4.924305 AACACAGTGAGAAACATGCAAT 57.076 36.364 7.81 0.00 0.00 3.56
3329 3815 4.717233 AAACACAGTGAGAAACATGCAA 57.283 36.364 7.81 0.00 0.00 4.08
3330 3816 4.157472 TGAAAACACAGTGAGAAACATGCA 59.843 37.500 7.81 0.00 0.00 3.96
3331 3817 4.671377 TGAAAACACAGTGAGAAACATGC 58.329 39.130 7.81 0.00 0.00 4.06
3332 3818 6.732154 AGATGAAAACACAGTGAGAAACATG 58.268 36.000 7.81 0.00 0.00 3.21
3333 3819 6.949352 AGATGAAAACACAGTGAGAAACAT 57.051 33.333 7.81 6.19 0.00 2.71
3334 3820 7.498900 ACATAGATGAAAACACAGTGAGAAACA 59.501 33.333 7.81 1.45 0.00 2.83
3335 3821 7.865707 ACATAGATGAAAACACAGTGAGAAAC 58.134 34.615 7.81 0.00 0.00 2.78
3336 3822 7.173218 GGACATAGATGAAAACACAGTGAGAAA 59.827 37.037 7.81 0.00 0.00 2.52
3337 3823 6.650807 GGACATAGATGAAAACACAGTGAGAA 59.349 38.462 7.81 0.00 0.00 2.87
3338 3824 6.166279 GGACATAGATGAAAACACAGTGAGA 58.834 40.000 7.81 0.00 0.00 3.27
3339 3825 5.352569 GGGACATAGATGAAAACACAGTGAG 59.647 44.000 7.81 0.00 0.00 3.51
3340 3826 5.013079 AGGGACATAGATGAAAACACAGTGA 59.987 40.000 7.81 0.00 0.00 3.41
3341 3827 5.122869 CAGGGACATAGATGAAAACACAGTG 59.877 44.000 0.00 0.00 0.00 3.66
3342 3828 5.013079 TCAGGGACATAGATGAAAACACAGT 59.987 40.000 0.00 0.00 0.00 3.55
3343 3829 5.491070 TCAGGGACATAGATGAAAACACAG 58.509 41.667 0.00 0.00 0.00 3.66
3344 3830 5.497464 TCAGGGACATAGATGAAAACACA 57.503 39.130 0.00 0.00 0.00 3.72
3345 3831 6.115446 TGATCAGGGACATAGATGAAAACAC 58.885 40.000 0.00 0.00 0.00 3.32
3346 3832 6.312141 TGATCAGGGACATAGATGAAAACA 57.688 37.500 0.00 0.00 0.00 2.83
3347 3833 7.284034 ACAATGATCAGGGACATAGATGAAAAC 59.716 37.037 0.09 0.00 0.00 2.43
3348 3834 7.348815 ACAATGATCAGGGACATAGATGAAAA 58.651 34.615 0.09 0.00 0.00 2.29
3349 3835 6.903516 ACAATGATCAGGGACATAGATGAAA 58.096 36.000 0.09 0.00 0.00 2.69
3350 3836 6.505048 ACAATGATCAGGGACATAGATGAA 57.495 37.500 0.09 0.00 0.00 2.57
3351 3837 6.505048 AACAATGATCAGGGACATAGATGA 57.495 37.500 0.09 0.00 0.00 2.92
3352 3838 8.562892 GTTTAACAATGATCAGGGACATAGATG 58.437 37.037 0.09 0.00 0.00 2.90
3353 3839 8.497745 AGTTTAACAATGATCAGGGACATAGAT 58.502 33.333 0.09 0.00 0.00 1.98
3354 3840 7.770433 CAGTTTAACAATGATCAGGGACATAGA 59.230 37.037 0.09 0.00 0.00 1.98
3355 3841 7.554118 ACAGTTTAACAATGATCAGGGACATAG 59.446 37.037 0.09 0.00 0.00 2.23
3356 3842 7.402054 ACAGTTTAACAATGATCAGGGACATA 58.598 34.615 0.09 0.00 0.00 2.29
3357 3843 6.248433 ACAGTTTAACAATGATCAGGGACAT 58.752 36.000 0.09 0.00 0.00 3.06
3358 3844 5.630121 ACAGTTTAACAATGATCAGGGACA 58.370 37.500 0.09 0.00 0.00 4.02
3359 3845 5.940470 AGACAGTTTAACAATGATCAGGGAC 59.060 40.000 0.09 0.00 0.00 4.46
3360 3846 5.939883 CAGACAGTTTAACAATGATCAGGGA 59.060 40.000 0.09 0.00 0.00 4.20
3361 3847 5.939883 TCAGACAGTTTAACAATGATCAGGG 59.060 40.000 0.09 0.00 0.00 4.45
3362 3848 6.401474 CGTCAGACAGTTTAACAATGATCAGG 60.401 42.308 0.09 0.00 0.00 3.86
3363 3849 6.366061 TCGTCAGACAGTTTAACAATGATCAG 59.634 38.462 0.09 0.00 0.00 2.90
3364 3850 6.220201 TCGTCAGACAGTTTAACAATGATCA 58.780 36.000 0.00 0.00 0.00 2.92
3365 3851 6.706055 TCGTCAGACAGTTTAACAATGATC 57.294 37.500 0.41 0.00 0.00 2.92
3366 3852 7.011950 TGTTTCGTCAGACAGTTTAACAATGAT 59.988 33.333 0.41 0.00 0.00 2.45
3367 3853 6.314152 TGTTTCGTCAGACAGTTTAACAATGA 59.686 34.615 0.41 0.00 0.00 2.57
3368 3854 6.482835 TGTTTCGTCAGACAGTTTAACAATG 58.517 36.000 0.41 0.00 0.00 2.82
3369 3855 6.671614 TGTTTCGTCAGACAGTTTAACAAT 57.328 33.333 0.41 0.00 0.00 2.71
3370 3856 6.369340 TCTTGTTTCGTCAGACAGTTTAACAA 59.631 34.615 0.41 8.03 34.32 2.83
3371 3857 5.870433 TCTTGTTTCGTCAGACAGTTTAACA 59.130 36.000 0.41 0.85 0.00 2.41
3372 3858 6.340537 TCTTGTTTCGTCAGACAGTTTAAC 57.659 37.500 0.41 0.00 0.00 2.01
3373 3859 6.369340 TGTTCTTGTTTCGTCAGACAGTTTAA 59.631 34.615 0.41 0.00 0.00 1.52
3374 3860 5.870433 TGTTCTTGTTTCGTCAGACAGTTTA 59.130 36.000 0.41 0.00 0.00 2.01
3375 3861 4.693566 TGTTCTTGTTTCGTCAGACAGTTT 59.306 37.500 0.41 0.00 0.00 2.66
3376 3862 4.092968 GTGTTCTTGTTTCGTCAGACAGTT 59.907 41.667 0.41 0.00 0.00 3.16
3377 3863 3.617263 GTGTTCTTGTTTCGTCAGACAGT 59.383 43.478 0.41 0.00 0.00 3.55
3378 3864 3.301835 CGTGTTCTTGTTTCGTCAGACAG 60.302 47.826 0.41 0.00 0.00 3.51
3379 3865 2.601314 CGTGTTCTTGTTTCGTCAGACA 59.399 45.455 0.41 0.00 0.00 3.41
3380 3866 2.596807 GCGTGTTCTTGTTTCGTCAGAC 60.597 50.000 0.00 0.00 0.00 3.51
3381 3867 1.591158 GCGTGTTCTTGTTTCGTCAGA 59.409 47.619 0.00 0.00 0.00 3.27
3382 3868 1.332904 GGCGTGTTCTTGTTTCGTCAG 60.333 52.381 0.00 0.00 0.00 3.51
3383 3869 0.653636 GGCGTGTTCTTGTTTCGTCA 59.346 50.000 0.00 0.00 0.00 4.35
3384 3870 0.935196 AGGCGTGTTCTTGTTTCGTC 59.065 50.000 0.00 0.00 0.00 4.20
3385 3871 2.228138 TAGGCGTGTTCTTGTTTCGT 57.772 45.000 0.00 0.00 0.00 3.85
3386 3872 3.185594 TGATTAGGCGTGTTCTTGTTTCG 59.814 43.478 0.00 0.00 0.00 3.46
3387 3873 4.742438 TGATTAGGCGTGTTCTTGTTTC 57.258 40.909 0.00 0.00 0.00 2.78
3388 3874 5.508200 TTTGATTAGGCGTGTTCTTGTTT 57.492 34.783 0.00 0.00 0.00 2.83
3389 3875 5.067283 ACTTTTGATTAGGCGTGTTCTTGTT 59.933 36.000 0.00 0.00 0.00 2.83
3390 3876 4.578928 ACTTTTGATTAGGCGTGTTCTTGT 59.421 37.500 0.00 0.00 0.00 3.16
3391 3877 4.911610 CACTTTTGATTAGGCGTGTTCTTG 59.088 41.667 0.00 0.00 0.00 3.02
3392 3878 4.578928 ACACTTTTGATTAGGCGTGTTCTT 59.421 37.500 0.00 0.00 32.23 2.52
3393 3879 4.134563 ACACTTTTGATTAGGCGTGTTCT 58.865 39.130 0.00 0.00 32.23 3.01
3394 3880 4.483476 ACACTTTTGATTAGGCGTGTTC 57.517 40.909 0.00 0.00 32.23 3.18
3395 3881 4.336993 TCAACACTTTTGATTAGGCGTGTT 59.663 37.500 0.00 0.00 43.81 3.32
3396 3882 3.880490 TCAACACTTTTGATTAGGCGTGT 59.120 39.130 0.00 0.00 37.21 4.49
3397 3883 4.024048 ACTCAACACTTTTGATTAGGCGTG 60.024 41.667 0.00 0.00 0.00 5.34
3398 3884 4.134563 ACTCAACACTTTTGATTAGGCGT 58.865 39.130 0.00 0.00 0.00 5.68
3399 3885 4.749245 ACTCAACACTTTTGATTAGGCG 57.251 40.909 0.00 0.00 0.00 5.52
3400 3886 7.023575 CACATACTCAACACTTTTGATTAGGC 58.976 38.462 0.00 0.00 0.00 3.93
3401 3887 8.017373 CACACATACTCAACACTTTTGATTAGG 58.983 37.037 0.00 0.00 0.00 2.69
3402 3888 8.559536 ACACACATACTCAACACTTTTGATTAG 58.440 33.333 0.00 0.00 0.00 1.73
3403 3889 8.445275 ACACACATACTCAACACTTTTGATTA 57.555 30.769 0.00 0.00 0.00 1.75
3404 3890 7.333528 ACACACATACTCAACACTTTTGATT 57.666 32.000 0.00 0.00 0.00 2.57
3405 3891 6.942532 ACACACATACTCAACACTTTTGAT 57.057 33.333 0.00 0.00 0.00 2.57
3406 3892 6.150307 ACAACACACATACTCAACACTTTTGA 59.850 34.615 0.00 0.00 0.00 2.69
3407 3893 6.251163 CACAACACACATACTCAACACTTTTG 59.749 38.462 0.00 0.00 0.00 2.44
3408 3894 6.321717 CACAACACACATACTCAACACTTTT 58.678 36.000 0.00 0.00 0.00 2.27
3409 3895 5.676079 GCACAACACACATACTCAACACTTT 60.676 40.000 0.00 0.00 0.00 2.66
3410 3896 4.201910 GCACAACACACATACTCAACACTT 60.202 41.667 0.00 0.00 0.00 3.16
3411 3897 3.312421 GCACAACACACATACTCAACACT 59.688 43.478 0.00 0.00 0.00 3.55
3412 3898 3.064682 TGCACAACACACATACTCAACAC 59.935 43.478 0.00 0.00 0.00 3.32
3413 3899 3.274288 TGCACAACACACATACTCAACA 58.726 40.909 0.00 0.00 0.00 3.33
3414 3900 3.961477 TGCACAACACACATACTCAAC 57.039 42.857 0.00 0.00 0.00 3.18
3415 3901 6.816134 AATATGCACAACACACATACTCAA 57.184 33.333 0.00 0.00 0.00 3.02
3416 3902 6.206438 ACAAATATGCACAACACACATACTCA 59.794 34.615 0.00 0.00 0.00 3.41
3417 3903 6.524239 CACAAATATGCACAACACACATACTC 59.476 38.462 0.00 0.00 0.00 2.59
3418 3904 6.016360 ACACAAATATGCACAACACACATACT 60.016 34.615 0.00 0.00 0.00 2.12
3419 3905 6.148948 ACACAAATATGCACAACACACATAC 58.851 36.000 0.00 0.00 0.00 2.39
3420 3906 6.324561 ACACAAATATGCACAACACACATA 57.675 33.333 0.00 0.00 0.00 2.29
3421 3907 5.199024 ACACAAATATGCACAACACACAT 57.801 34.783 0.00 0.00 0.00 3.21
3422 3908 4.645762 ACACAAATATGCACAACACACA 57.354 36.364 0.00 0.00 0.00 3.72
3423 3909 6.089283 CCAATACACAAATATGCACAACACAC 59.911 38.462 0.00 0.00 0.00 3.82
3424 3910 6.155136 CCAATACACAAATATGCACAACACA 58.845 36.000 0.00 0.00 0.00 3.72
3425 3911 5.576384 CCCAATACACAAATATGCACAACAC 59.424 40.000 0.00 0.00 0.00 3.32
3426 3912 5.718146 CCCAATACACAAATATGCACAACA 58.282 37.500 0.00 0.00 0.00 3.33
3427 3913 4.566360 GCCCAATACACAAATATGCACAAC 59.434 41.667 0.00 0.00 0.00 3.32
3428 3914 4.382470 GGCCCAATACACAAATATGCACAA 60.382 41.667 0.00 0.00 0.00 3.33
3429 3915 3.131933 GGCCCAATACACAAATATGCACA 59.868 43.478 0.00 0.00 0.00 4.57
3430 3916 3.492482 GGGCCCAATACACAAATATGCAC 60.492 47.826 19.95 0.00 0.00 4.57
3431 3917 2.697751 GGGCCCAATACACAAATATGCA 59.302 45.455 19.95 0.00 0.00 3.96
3432 3918 2.697751 TGGGCCCAATACACAAATATGC 59.302 45.455 26.33 0.00 0.00 3.14
3433 3919 3.069443 GGTGGGCCCAATACACAAATATG 59.931 47.826 30.64 0.00 36.87 1.78
3434 3920 3.052186 AGGTGGGCCCAATACACAAATAT 60.052 43.478 30.64 0.00 36.87 1.28
3435 3921 2.313342 AGGTGGGCCCAATACACAAATA 59.687 45.455 30.64 0.00 36.87 1.40
3436 3922 1.078656 AGGTGGGCCCAATACACAAAT 59.921 47.619 30.64 1.20 36.87 2.32
3437 3923 0.485099 AGGTGGGCCCAATACACAAA 59.515 50.000 30.64 0.00 36.87 2.83
3438 3924 0.485099 AAGGTGGGCCCAATACACAA 59.515 50.000 30.64 0.00 36.87 3.33
3439 3925 2.169106 AAGGTGGGCCCAATACACA 58.831 52.632 30.64 0.00 36.87 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.