AutoCloner

Multiple sequence alignment - TraesCS1D01G142500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS1D01G142500	chr1D	100.000	4020	0	0	1	4020	198018500	198022519	0.000000e+00	7424.0
1	TraesCS1D01G142500	chr1D	98.409	440	7	0	1	440	198011060	198011499	0.000000e+00	774.0
2	TraesCS1D01G142500	chr1D	98.186	441	7	1	1	440	347943769	347943329	0.000000e+00	769.0
3	TraesCS1D01G142500	chr1D	97.273	440	12	0	1	440	425267219	425267658	0.000000e+00	747.0
4	TraesCS1D01G142500	chr1A	89.649	3246	165	80	434	3633	248611418	248614538	0.000000e+00	3975.0
5	TraesCS1D01G142500	chr1A	90.244	82	5	1	3942	4020	248614716	248614797	1.980000e-18	104.0
6	TraesCS1D01G142500	chr1B	90.913	2289	136	41	799	3053	277958364	277960614	0.000000e+00	3009.0
7	TraesCS1D01G142500	chr1B	87.616	541	27	14	3094	3633	277961759	277962260	3.460000e-165	592.0
8	TraesCS1D01G142500	chr1B	83.942	137	6	3	3900	4020	277962369	277962505	2.540000e-22	117.0
9	TraesCS1D01G142500	chr5D	98.409	440	7	0	1	440	8579093	8579532	0.000000e+00	774.0
10	TraesCS1D01G142500	chr5D	82.040	451	47	16	1180	1622	220776649	220776225	1.780000e-93	353.0
11	TraesCS1D01G142500	chr2D	98.409	440	7	0	1	440	96739047	96738608	0.000000e+00	774.0
12	TraesCS1D01G142500	chr2D	97.500	440	11	0	1	440	570977206	570977645	0.000000e+00	752.0
13	TraesCS1D01G142500	chr6D	97.273	440	12	0	1	440	336148434	336147995	0.000000e+00	747.0
14	TraesCS1D01G142500	chr7D	97.260	438	12	0	3	440	515041529	515041092	0.000000e+00	743.0
15	TraesCS1D01G142500	chr7D	82.927	451	46	18	1179	1622	59672721	59672295	1.050000e-100	377.0
16	TraesCS1D01G142500	chrUn	97.045	440	13	0	1	440	69853053	69853492	0.000000e+00	741.0
17	TraesCS1D01G142500	chr4D	97.059	34	1	0	535	568	373565635	373565602	1.560000e-04	58.4

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS1D01G142500	chr1D	198018500	198022519	4019	False	7424.000000	7424	100.000000	1	4020	1	chr1D.!!$F2	4019
1	TraesCS1D01G142500	chr1A	248611418	248614797	3379	False	2039.500000	3975	89.946500	434	4020	2	chr1A.!!$F1	3586
2	TraesCS1D01G142500	chr1B	277958364	277962505	4141	False	1239.333333	3009	87.490333	799	4020	3	chr1B.!!$F1	3221

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Hairpin	End Stability	Orientation
555	556	0.034574	TACCAGGTTACCGTCCGCTA	60.035	55.0	0.00	4.26	F
1393	1419	0.169009	GGCAAGATTTGTCCGCTGTC	59.831	55.0	0.00	3.51	F
2719	2759	0.035317	AGCTGGATTCGTCAGTGCAA	59.965	50.0	34.89	4.08	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2065	2102	0.925466	GCGGCATCATGAACATTTGC	59.075	50.0	9.31	9.31	0.00	3.68	R
2930	2976	0.316937	CGCACCACAATCACACACAC	60.317	55.0	0.00	0.00	0.00	3.82	R
3894	5122	0.531532	ATCTGTCAGTATGCCGCTGC	60.532	55.0	0.00	0.00	34.76	5.25	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
24	25	4.035102	AGGGCCCCTGAACGCTTC	62.035	66.667	21.43	0.00	29.57	3.86
26	27	4.035102	GGCCCCTGAACGCTTCCT	62.035	66.667	0.00	0.00	0.00	3.36
27	28	2.034221	GCCCCTGAACGCTTCCTT	59.966	61.111	0.00	0.00	0.00	3.36
28	29	2.335712	GCCCCTGAACGCTTCCTTG	61.336	63.158	0.00	0.00	0.00	3.61
29	30	1.073199	CCCCTGAACGCTTCCTTGT	59.927	57.895	0.00	0.00	0.00	3.16
30	31	1.237285	CCCCTGAACGCTTCCTTGTG	61.237	60.000	0.00	0.00	0.00	3.33
31	32	0.535102	CCCTGAACGCTTCCTTGTGT	60.535	55.000	0.00	0.00	0.00	3.72
32	33	1.270625	CCCTGAACGCTTCCTTGTGTA	60.271	52.381	0.00	0.00	0.00	2.90
33	34	2.615493	CCCTGAACGCTTCCTTGTGTAT	60.615	50.000	0.00	0.00	0.00	2.29
34	35	2.673368	CCTGAACGCTTCCTTGTGTATC	59.327	50.000	0.00	0.00	0.00	2.24
35	36	3.325870	CTGAACGCTTCCTTGTGTATCA	58.674	45.455	0.00	0.00	0.00	2.15
36	37	3.935203	CTGAACGCTTCCTTGTGTATCAT	59.065	43.478	0.00	0.00	0.00	2.45
37	38	5.079689	TGAACGCTTCCTTGTGTATCATA	57.920	39.130	0.00	0.00	0.00	2.15
38	39	5.109210	TGAACGCTTCCTTGTGTATCATAG	58.891	41.667	0.00	0.00	0.00	2.23
39	40	4.060038	ACGCTTCCTTGTGTATCATAGG	57.940	45.455	0.00	0.00	0.00	2.57
40	41	3.451178	ACGCTTCCTTGTGTATCATAGGT	59.549	43.478	0.00	0.00	0.00	3.08
41	42	4.647853	ACGCTTCCTTGTGTATCATAGGTA	59.352	41.667	0.00	0.00	0.00	3.08
42	43	5.304614	ACGCTTCCTTGTGTATCATAGGTAT	59.695	40.000	0.00	0.00	0.00	2.73
43	44	6.492429	ACGCTTCCTTGTGTATCATAGGTATA	59.508	38.462	0.00	0.00	0.00	1.47
44	45	6.807230	CGCTTCCTTGTGTATCATAGGTATAC	59.193	42.308	0.00	0.00	0.00	1.47
45	46	7.309255	CGCTTCCTTGTGTATCATAGGTATACT	60.309	40.741	2.25	0.00	32.19	2.12
46	47	7.815068	GCTTCCTTGTGTATCATAGGTATACTG	59.185	40.741	2.25	0.00	32.19	2.74
47	48	8.777578	TTCCTTGTGTATCATAGGTATACTGT	57.222	34.615	2.25	0.00	32.19	3.55
48	49	8.777578	TCCTTGTGTATCATAGGTATACTGTT	57.222	34.615	2.25	0.00	32.19	3.16
49	50	8.638873	TCCTTGTGTATCATAGGTATACTGTTG	58.361	37.037	2.25	0.00	32.19	3.33
50	51	8.421784	CCTTGTGTATCATAGGTATACTGTTGT	58.578	37.037	2.25	0.00	32.19	3.32
51	52	9.464714	CTTGTGTATCATAGGTATACTGTTGTC	57.535	37.037	2.25	0.00	32.19	3.18
52	53	8.762481	TGTGTATCATAGGTATACTGTTGTCT	57.238	34.615	2.25	0.00	32.19	3.41
53	54	9.856162	TGTGTATCATAGGTATACTGTTGTCTA	57.144	33.333	2.25	0.00	32.19	2.59
72	73	6.827641	TGTCTAACAACAATATCTCGTTTGC	58.172	36.000	0.00	0.00	0.00	3.68
73	74	5.952064	GTCTAACAACAATATCTCGTTTGCG	59.048	40.000	0.00	0.00	39.92	4.85
74	75	3.117434	ACAACAATATCTCGTTTGCGC	57.883	42.857	0.00	0.00	38.14	6.09
75	76	2.482336	ACAACAATATCTCGTTTGCGCA	59.518	40.909	5.66	5.66	38.14	6.09
76	77	2.806288	ACAATATCTCGTTTGCGCAC	57.194	45.000	11.12	0.00	38.14	5.34
77	78	1.396996	ACAATATCTCGTTTGCGCACC	59.603	47.619	11.12	2.10	38.14	5.01
78	79	1.665679	CAATATCTCGTTTGCGCACCT	59.334	47.619	11.12	0.00	38.14	4.00
79	80	1.290203	ATATCTCGTTTGCGCACCTG	58.710	50.000	11.12	1.83	38.14	4.00
80	81	0.245266	TATCTCGTTTGCGCACCTGA	59.755	50.000	11.12	7.07	38.14	3.86
81	82	1.016130	ATCTCGTTTGCGCACCTGAG	61.016	55.000	11.12	17.32	38.14	3.35
82	83	1.664649	CTCGTTTGCGCACCTGAGA	60.665	57.895	21.24	11.62	38.14	3.27
83	84	1.621301	CTCGTTTGCGCACCTGAGAG	61.621	60.000	21.24	16.20	38.14	3.20
84	85	2.671177	CGTTTGCGCACCTGAGAGG	61.671	63.158	11.12	0.00	42.49	3.69
94	95	2.832931	CCTGAGAGGTTTGCACGAG	58.167	57.895	0.00	0.00	0.00	4.18
95	96	1.294659	CCTGAGAGGTTTGCACGAGC	61.295	60.000	0.00	0.00	42.57	5.03
96	97	0.320247	CTGAGAGGTTTGCACGAGCT	60.320	55.000	6.36	0.90	42.74	4.09
97	98	0.106708	TGAGAGGTTTGCACGAGCTT	59.893	50.000	6.36	0.00	42.74	3.74
98	99	1.230324	GAGAGGTTTGCACGAGCTTT	58.770	50.000	6.36	0.00	42.74	3.51
99	100	0.947244	AGAGGTTTGCACGAGCTTTG	59.053	50.000	6.36	0.00	42.74	2.77
100	101	0.661483	GAGGTTTGCACGAGCTTTGC	60.661	55.000	13.06	13.06	42.74	3.68
101	102	1.661509	GGTTTGCACGAGCTTTGCC	60.662	57.895	16.32	3.84	42.74	4.52
102	103	1.360192	GTTTGCACGAGCTTTGCCT	59.640	52.632	16.32	0.00	42.74	4.75
103	104	0.591170	GTTTGCACGAGCTTTGCCTA	59.409	50.000	16.32	4.49	42.74	3.93
104	105	0.591170	TTTGCACGAGCTTTGCCTAC	59.409	50.000	16.32	0.00	42.74	3.18
105	106	1.565156	TTGCACGAGCTTTGCCTACG	61.565	55.000	16.32	3.24	42.74	3.51
106	107	2.027625	GCACGAGCTTTGCCTACGT	61.028	57.895	9.58	0.00	37.91	3.57
107	108	1.566018	GCACGAGCTTTGCCTACGTT	61.566	55.000	9.58	0.00	37.91	3.99
108	109	0.163788	CACGAGCTTTGCCTACGTTG	59.836	55.000	0.00	0.00	33.25	4.10
109	110	0.249741	ACGAGCTTTGCCTACGTTGT	60.250	50.000	0.00	0.00	32.15	3.32
110	111	0.865769	CGAGCTTTGCCTACGTTGTT	59.134	50.000	0.00	0.00	0.00	2.83
111	112	1.136336	CGAGCTTTGCCTACGTTGTTC	60.136	52.381	0.00	0.00	0.00	3.18
112	113	1.871039	GAGCTTTGCCTACGTTGTTCA	59.129	47.619	0.00	0.00	0.00	3.18
113	114	1.873591	AGCTTTGCCTACGTTGTTCAG	59.126	47.619	0.00	0.00	0.00	3.02
114	115	1.663161	GCTTTGCCTACGTTGTTCAGC	60.663	52.381	0.00	0.00	0.00	4.26
115	116	1.873591	CTTTGCCTACGTTGTTCAGCT	59.126	47.619	0.00	0.00	0.00	4.24
116	117	2.823924	TTGCCTACGTTGTTCAGCTA	57.176	45.000	0.00	0.00	0.00	3.32
117	118	2.074547	TGCCTACGTTGTTCAGCTAC	57.925	50.000	0.00	0.00	0.00	3.58
118	119	1.341852	TGCCTACGTTGTTCAGCTACA	59.658	47.619	0.00	0.00	0.00	2.74
119	120	2.224090	TGCCTACGTTGTTCAGCTACAA	60.224	45.455	0.00	0.00	35.75	2.41
120	121	2.412089	GCCTACGTTGTTCAGCTACAAG	59.588	50.000	2.22	1.02	38.60	3.16
121	122	3.650139	CCTACGTTGTTCAGCTACAAGT	58.350	45.455	2.22	6.14	38.60	3.16
122	123	4.056050	CCTACGTTGTTCAGCTACAAGTT	58.944	43.478	2.22	0.00	38.60	2.66
123	124	4.150098	CCTACGTTGTTCAGCTACAAGTTC	59.850	45.833	2.22	0.00	38.60	3.01
124	125	2.538449	ACGTTGTTCAGCTACAAGTTCG	59.462	45.455	2.22	5.95	38.60	3.95
125	126	2.792674	CGTTGTTCAGCTACAAGTTCGA	59.207	45.455	2.22	0.00	38.60	3.71
126	127	3.361724	CGTTGTTCAGCTACAAGTTCGAC	60.362	47.826	2.22	0.00	38.60	4.20
127	128	2.750948	TGTTCAGCTACAAGTTCGACC	58.249	47.619	0.00	0.00	0.00	4.79
128	129	1.719780	GTTCAGCTACAAGTTCGACCG	59.280	52.381	0.00	0.00	0.00	4.79
129	130	1.241165	TCAGCTACAAGTTCGACCGA	58.759	50.000	0.00	0.00	0.00	4.69
130	131	1.610038	TCAGCTACAAGTTCGACCGAA	59.390	47.619	0.18	0.18	0.00	4.30
131	132	1.986378	CAGCTACAAGTTCGACCGAAG	59.014	52.381	4.98	0.00	34.49	3.79
132	133	1.612463	AGCTACAAGTTCGACCGAAGT	59.388	47.619	4.98	5.89	39.24	3.01
133	134	1.984297	GCTACAAGTTCGACCGAAGTC	59.016	52.381	12.19	0.00	36.84	3.01
134	135	2.593257	CTACAAGTTCGACCGAAGTCC	58.407	52.381	12.19	0.00	40.12	3.85
135	136	0.748450	ACAAGTTCGACCGAAGTCCA	59.252	50.000	12.19	0.00	40.12	4.02
136	137	1.343465	ACAAGTTCGACCGAAGTCCAT	59.657	47.619	12.19	0.23	40.12	3.41
137	138	2.559668	ACAAGTTCGACCGAAGTCCATA	59.440	45.455	12.19	0.00	40.12	2.74
138	139	2.921754	CAAGTTCGACCGAAGTCCATAC	59.078	50.000	12.19	0.00	40.12	2.39
139	140	2.165167	AGTTCGACCGAAGTCCATACA	58.835	47.619	4.98	0.00	40.12	2.29
140	141	2.758979	AGTTCGACCGAAGTCCATACAT	59.241	45.455	4.98	0.00	40.12	2.29
141	142	3.114065	GTTCGACCGAAGTCCATACATC	58.886	50.000	4.98	0.00	40.12	3.06
142	143	2.651455	TCGACCGAAGTCCATACATCT	58.349	47.619	0.00	0.00	40.12	2.90
143	144	3.812262	TCGACCGAAGTCCATACATCTA	58.188	45.455	0.00	0.00	40.12	1.98
144	145	4.201657	TCGACCGAAGTCCATACATCTAA	58.798	43.478	0.00	0.00	40.12	2.10
145	146	4.825634	TCGACCGAAGTCCATACATCTAAT	59.174	41.667	0.00	0.00	40.12	1.73
146	147	4.917998	CGACCGAAGTCCATACATCTAATG	59.082	45.833	0.00	0.00	40.12	1.90
147	148	5.507482	CGACCGAAGTCCATACATCTAATGT	60.507	44.000	0.00	0.00	42.47	2.71
148	149	6.293790	CGACCGAAGTCCATACATCTAATGTA	60.294	42.308	2.51	2.51	43.59	2.29
149	150	7.085116	GACCGAAGTCCATACATCTAATGTAG	58.915	42.308	6.04	0.00	41.74	2.74
150	151	7.040617	GACCGAAGTCCATACATCTAATGTAGA	60.041	40.741	6.04	0.00	41.74	2.59
158	159	4.592485	ACATCTAATGTAGAGGCTTCCG	57.408	45.455	0.00	0.00	42.78	4.30
159	160	3.961408	ACATCTAATGTAGAGGCTTCCGT	59.039	43.478	0.00	0.00	42.78	4.69
160	161	5.138276	ACATCTAATGTAGAGGCTTCCGTA	58.862	41.667	0.00	0.00	42.78	4.02
161	162	5.775701	ACATCTAATGTAGAGGCTTCCGTAT	59.224	40.000	0.00	0.00	42.78	3.06
162	163	5.961396	TCTAATGTAGAGGCTTCCGTATC	57.039	43.478	0.00	0.00	0.00	2.24
163	164	5.382616	TCTAATGTAGAGGCTTCCGTATCA	58.617	41.667	0.00	0.00	0.00	2.15
164	165	4.592485	AATGTAGAGGCTTCCGTATCAG	57.408	45.455	0.00	0.00	0.00	2.90
165	166	3.014304	TGTAGAGGCTTCCGTATCAGT	57.986	47.619	0.00	0.00	0.00	3.41
166	167	2.950309	TGTAGAGGCTTCCGTATCAGTC	59.050	50.000	0.00	0.00	0.00	3.51
167	168	1.025812	AGAGGCTTCCGTATCAGTCG	58.974	55.000	0.00	0.00	0.00	4.18
168	169	0.595310	GAGGCTTCCGTATCAGTCGC	60.595	60.000	0.00	0.00	0.00	5.19
169	170	1.141019	GGCTTCCGTATCAGTCGCA	59.859	57.895	0.00	0.00	0.00	5.10
170	171	0.872021	GGCTTCCGTATCAGTCGCAG	60.872	60.000	0.00	0.00	0.00	5.18
171	172	0.179134	GCTTCCGTATCAGTCGCAGT	60.179	55.000	0.00	0.00	0.00	4.40
172	173	1.065102	GCTTCCGTATCAGTCGCAGTA	59.935	52.381	0.00	0.00	0.00	2.74
173	174	2.855187	GCTTCCGTATCAGTCGCAGTAG	60.855	54.545	0.00	0.00	0.00	2.57
174	175	1.306148	TCCGTATCAGTCGCAGTAGG	58.694	55.000	0.00	0.00	0.00	3.18
175	176	1.134310	TCCGTATCAGTCGCAGTAGGA	60.134	52.381	0.00	0.00	0.00	2.94
176	177	1.674441	CCGTATCAGTCGCAGTAGGAA	59.326	52.381	0.00	0.00	0.00	3.36
177	178	2.098607	CCGTATCAGTCGCAGTAGGAAA	59.901	50.000	0.00	0.00	0.00	3.13
178	179	3.106672	CGTATCAGTCGCAGTAGGAAAC	58.893	50.000	0.00	0.00	0.00	2.78
180	181	3.512033	ATCAGTCGCAGTAGGAAACTC	57.488	47.619	0.00	0.00	43.67	3.01
181	182	2.515854	TCAGTCGCAGTAGGAAACTCT	58.484	47.619	0.00	0.00	43.67	3.24
182	183	2.229062	TCAGTCGCAGTAGGAAACTCTG	59.771	50.000	0.00	0.00	43.67	3.35
183	184	1.546476	AGTCGCAGTAGGAAACTCTGG	59.454	52.381	0.00	0.00	43.67	3.86
184	185	1.544691	GTCGCAGTAGGAAACTCTGGA	59.455	52.381	0.00	0.00	43.67	3.86
185	186	2.029290	GTCGCAGTAGGAAACTCTGGAA	60.029	50.000	0.00	0.00	43.67	3.53
186	187	2.832129	TCGCAGTAGGAAACTCTGGAAT	59.168	45.455	0.00	0.00	43.67	3.01
187	188	3.260884	TCGCAGTAGGAAACTCTGGAATT	59.739	43.478	0.00	0.00	43.67	2.17
188	189	4.464951	TCGCAGTAGGAAACTCTGGAATTA	59.535	41.667	0.00	0.00	43.67	1.40
189	190	4.567159	CGCAGTAGGAAACTCTGGAATTAC	59.433	45.833	0.00	0.00	43.67	1.89
190	191	5.624738	CGCAGTAGGAAACTCTGGAATTACT	60.625	44.000	0.00	0.00	43.67	2.24
191	192	6.174049	GCAGTAGGAAACTCTGGAATTACTT	58.826	40.000	0.00	0.00	43.67	2.24
192	193	6.314152	GCAGTAGGAAACTCTGGAATTACTTC	59.686	42.308	0.00	0.00	43.67	3.01
193	194	6.819146	CAGTAGGAAACTCTGGAATTACTTCC	59.181	42.308	4.92	4.92	45.95	3.46
206	207	6.268825	GAATTACTTCCAAGGTTCCTTTCC	57.731	41.667	0.86	0.00	0.00	3.13
207	208	5.600669	ATTACTTCCAAGGTTCCTTTCCT	57.399	39.130	0.86	0.00	36.81	3.36
208	209	3.973472	ACTTCCAAGGTTCCTTTCCTT	57.027	42.857	0.86	0.00	44.93	3.36
209	210	4.265856	ACTTCCAAGGTTCCTTTCCTTT	57.734	40.909	0.86	0.00	42.57	3.11
210	211	3.960755	ACTTCCAAGGTTCCTTTCCTTTG	59.039	43.478	0.86	0.00	42.57	2.77
211	212	3.963476	TCCAAGGTTCCTTTCCTTTGA	57.037	42.857	0.86	0.00	42.57	2.69
212	213	3.562182	TCCAAGGTTCCTTTCCTTTGAC	58.438	45.455	0.86	0.00	42.57	3.18
213	214	2.628178	CCAAGGTTCCTTTCCTTTGACC	59.372	50.000	0.86	0.00	42.57	4.02
214	215	3.566351	CAAGGTTCCTTTCCTTTGACCT	58.434	45.455	0.86	0.00	42.57	3.85
215	216	3.229697	AGGTTCCTTTCCTTTGACCTG	57.770	47.619	0.00	0.00	36.23	4.00
216	217	2.783510	AGGTTCCTTTCCTTTGACCTGA	59.216	45.455	0.00	0.00	36.23	3.86
217	218	3.399305	AGGTTCCTTTCCTTTGACCTGAT	59.601	43.478	0.00	0.00	36.23	2.90
218	219	3.507622	GGTTCCTTTCCTTTGACCTGATG	59.492	47.826	0.00	0.00	0.00	3.07
219	220	4.398319	GTTCCTTTCCTTTGACCTGATGA	58.602	43.478	0.00	0.00	0.00	2.92
220	221	4.021102	TCCTTTCCTTTGACCTGATGAC	57.979	45.455	0.00	0.00	0.00	3.06
221	222	2.744202	CCTTTCCTTTGACCTGATGACG	59.256	50.000	0.00	0.00	0.00	4.35
222	223	3.557054	CCTTTCCTTTGACCTGATGACGA	60.557	47.826	0.00	0.00	0.00	4.20
223	224	3.762407	TTCCTTTGACCTGATGACGAA	57.238	42.857	0.00	0.00	0.00	3.85
224	225	3.319137	TCCTTTGACCTGATGACGAAG	57.681	47.619	0.00	0.00	0.00	3.79
225	226	2.897326	TCCTTTGACCTGATGACGAAGA	59.103	45.455	0.00	0.00	0.00	2.87
226	227	3.515502	TCCTTTGACCTGATGACGAAGAT	59.484	43.478	0.00	0.00	0.00	2.40
227	228	4.709886	TCCTTTGACCTGATGACGAAGATA	59.290	41.667	0.00	0.00	0.00	1.98
228	229	4.806247	CCTTTGACCTGATGACGAAGATAC	59.194	45.833	0.00	0.00	0.00	2.24
229	230	5.394663	CCTTTGACCTGATGACGAAGATACT	60.395	44.000	0.00	0.00	0.00	2.12
230	231	5.661056	TTGACCTGATGACGAAGATACTT	57.339	39.130	0.00	0.00	0.00	2.24
231	232	4.998788	TGACCTGATGACGAAGATACTTG	58.001	43.478	0.00	0.00	0.00	3.16
232	233	4.462834	TGACCTGATGACGAAGATACTTGT	59.537	41.667	0.00	0.00	0.00	3.16
233	234	5.047306	TGACCTGATGACGAAGATACTTGTT	60.047	40.000	0.00	0.00	0.00	2.83
234	235	6.152154	TGACCTGATGACGAAGATACTTGTTA	59.848	38.462	0.00	0.00	0.00	2.41
235	236	7.113658	ACCTGATGACGAAGATACTTGTTAT	57.886	36.000	0.00	0.00	0.00	1.89
236	237	7.203910	ACCTGATGACGAAGATACTTGTTATC	58.796	38.462	0.00	0.00	37.45	1.75
238	239	7.593273	CCTGATGACGAAGATACTTGTTATCTC	59.407	40.741	0.00	0.00	45.47	2.75
239	240	7.132863	TGATGACGAAGATACTTGTTATCTCG	58.867	38.462	0.00	9.56	45.47	4.04
240	241	6.432607	TGACGAAGATACTTGTTATCTCGT	57.567	37.500	13.62	13.62	45.47	4.18
241	242	6.956393	GACGAAGATACTTGTTATCTCGTC	57.044	41.667	18.99	18.99	45.47	4.20
242	243	5.499935	ACGAAGATACTTGTTATCTCGTCG	58.500	41.667	11.28	11.28	45.47	5.12
243	244	5.292834	ACGAAGATACTTGTTATCTCGTCGA	59.707	40.000	16.60	0.00	45.47	4.20
244	245	5.841811	CGAAGATACTTGTTATCTCGTCGAG	59.158	44.000	16.33	16.33	45.47	4.04
245	246	6.509837	CGAAGATACTTGTTATCTCGTCGAGT	60.510	42.308	21.15	11.51	45.47	4.18
246	247	6.680874	AGATACTTGTTATCTCGTCGAGTT	57.319	37.500	21.15	15.64	43.10	3.01
247	248	6.487960	AGATACTTGTTATCTCGTCGAGTTG	58.512	40.000	21.15	4.41	43.10	3.16
248	249	3.243336	ACTTGTTATCTCGTCGAGTTGC	58.757	45.455	21.15	11.20	0.00	4.17
249	250	3.242518	CTTGTTATCTCGTCGAGTTGCA	58.757	45.455	21.15	13.32	0.00	4.08
250	251	2.592194	TGTTATCTCGTCGAGTTGCAC	58.408	47.619	21.15	14.05	0.00	4.57
251	252	2.228103	TGTTATCTCGTCGAGTTGCACT	59.772	45.455	21.15	4.31	0.00	4.40
252	253	2.544480	TATCTCGTCGAGTTGCACTG	57.456	50.000	21.15	0.00	0.00	3.66
253	254	0.598562	ATCTCGTCGAGTTGCACTGT	59.401	50.000	21.15	0.00	0.00	3.55
254	255	0.040336	TCTCGTCGAGTTGCACTGTC	60.040	55.000	21.15	0.00	0.00	3.51
255	256	1.004277	CTCGTCGAGTTGCACTGTCC	61.004	60.000	14.27	0.00	0.00	4.02
256	257	1.007271	CGTCGAGTTGCACTGTCCT	60.007	57.895	0.00	0.00	0.00	3.85
257	258	1.004277	CGTCGAGTTGCACTGTCCTC	61.004	60.000	0.00	0.00	0.00	3.71
258	259	0.667792	GTCGAGTTGCACTGTCCTCC	60.668	60.000	0.00	0.00	0.00	4.30
259	260	1.374758	CGAGTTGCACTGTCCTCCC	60.375	63.158	0.00	0.00	0.00	4.30
260	261	1.754745	GAGTTGCACTGTCCTCCCA	59.245	57.895	0.00	0.00	0.00	4.37
261	262	0.603975	GAGTTGCACTGTCCTCCCAC	60.604	60.000	0.00	0.00	0.00	4.61
262	263	1.056700	AGTTGCACTGTCCTCCCACT	61.057	55.000	0.00	0.00	0.00	4.00
263	264	0.179018	GTTGCACTGTCCTCCCACTT	60.179	55.000	0.00	0.00	0.00	3.16
264	265	1.071699	GTTGCACTGTCCTCCCACTTA	59.928	52.381	0.00	0.00	0.00	2.24
265	266	0.685097	TGCACTGTCCTCCCACTTAC	59.315	55.000	0.00	0.00	0.00	2.34
266	267	0.036294	GCACTGTCCTCCCACTTACC	60.036	60.000	0.00	0.00	0.00	2.85
267	268	0.613777	CACTGTCCTCCCACTTACCC	59.386	60.000	0.00	0.00	0.00	3.69
268	269	0.492276	ACTGTCCTCCCACTTACCCT	59.508	55.000	0.00	0.00	0.00	4.34
269	270	1.132495	ACTGTCCTCCCACTTACCCTT	60.132	52.381	0.00	0.00	0.00	3.95
270	271	1.985895	CTGTCCTCCCACTTACCCTTT	59.014	52.381	0.00	0.00	0.00	3.11
271	272	2.375509	CTGTCCTCCCACTTACCCTTTT	59.624	50.000	0.00	0.00	0.00	2.27
272	273	2.107552	TGTCCTCCCACTTACCCTTTTG	59.892	50.000	0.00	0.00	0.00	2.44
273	274	1.074889	TCCTCCCACTTACCCTTTTGC	59.925	52.381	0.00	0.00	0.00	3.68
274	275	1.203001	CCTCCCACTTACCCTTTTGCA	60.203	52.381	0.00	0.00	0.00	4.08
275	276	2.593026	CTCCCACTTACCCTTTTGCAA	58.407	47.619	0.00	0.00	0.00	4.08
276	277	2.558359	CTCCCACTTACCCTTTTGCAAG	59.442	50.000	0.00	0.00	0.00	4.01
277	278	2.175931	TCCCACTTACCCTTTTGCAAGA	59.824	45.455	0.00	0.00	30.57	3.02
278	279	2.962421	CCCACTTACCCTTTTGCAAGAA	59.038	45.455	0.00	0.00	30.57	2.52
279	280	3.243737	CCCACTTACCCTTTTGCAAGAAC	60.244	47.826	0.00	0.00	30.57	3.01
280	281	3.636764	CCACTTACCCTTTTGCAAGAACT	59.363	43.478	0.00	0.00	30.57	3.01
281	282	4.825085	CCACTTACCCTTTTGCAAGAACTA	59.175	41.667	0.00	0.00	30.57	2.24
282	283	5.476945	CCACTTACCCTTTTGCAAGAACTAT	59.523	40.000	0.00	0.00	30.57	2.12
283	284	6.015434	CCACTTACCCTTTTGCAAGAACTATT	60.015	38.462	0.00	0.00	30.57	1.73
284	285	7.084486	CACTTACCCTTTTGCAAGAACTATTC	58.916	38.462	0.00	0.00	30.57	1.75
285	286	7.004691	ACTTACCCTTTTGCAAGAACTATTCT	58.995	34.615	0.00	0.00	43.15	2.40
286	287	8.161425	ACTTACCCTTTTGCAAGAACTATTCTA	58.839	33.333	0.00	0.00	39.61	2.10
287	288	9.178758	CTTACCCTTTTGCAAGAACTATTCTAT	57.821	33.333	0.00	0.00	39.61	1.98
288	289	9.528489	TTACCCTTTTGCAAGAACTATTCTATT	57.472	29.630	0.00	0.00	39.61	1.73
289	290	8.422577	ACCCTTTTGCAAGAACTATTCTATTT	57.577	30.769	0.00	0.00	39.61	1.40
290	291	9.528489	ACCCTTTTGCAAGAACTATTCTATTTA	57.472	29.630	0.00	0.00	39.61	1.40
308	309	8.958175	TCTATTTAAAAGCATACCGTTTTGTG	57.042	30.769	0.00	0.00	0.00	3.33
309	310	8.024285	TCTATTTAAAAGCATACCGTTTTGTGG	58.976	33.333	0.00	0.00	0.00	4.17
310	311	2.432206	AAAGCATACCGTTTTGTGGC	57.568	45.000	0.00	0.00	0.00	5.01
311	312	1.323412	AAGCATACCGTTTTGTGGCA	58.677	45.000	0.00	0.00	0.00	4.92
312	313	1.323412	AGCATACCGTTTTGTGGCAA	58.677	45.000	0.00	0.00	0.00	4.52
313	314	1.683917	AGCATACCGTTTTGTGGCAAA	59.316	42.857	0.00	0.00	0.00	3.68
314	315	2.101582	AGCATACCGTTTTGTGGCAAAA	59.898	40.909	3.26	3.26	0.00	2.44
315	316	2.866762	GCATACCGTTTTGTGGCAAAAA	59.133	40.909	0.00	0.00	0.00	1.94
316	317	3.496507	GCATACCGTTTTGTGGCAAAAAT	59.503	39.130	3.18	0.00	32.02	1.82
317	318	4.376920	GCATACCGTTTTGTGGCAAAAATC	60.377	41.667	3.18	2.38	32.02	2.17
318	319	2.556257	ACCGTTTTGTGGCAAAAATCC	58.444	42.857	3.18	0.00	32.02	3.01
319	320	2.169561	ACCGTTTTGTGGCAAAAATCCT	59.830	40.909	3.18	0.00	32.02	3.24
320	321	3.202097	CCGTTTTGTGGCAAAAATCCTT	58.798	40.909	3.18	0.00	32.02	3.36
321	322	4.141914	ACCGTTTTGTGGCAAAAATCCTTA	60.142	37.500	3.18	0.00	32.02	2.69
322	323	4.447389	CCGTTTTGTGGCAAAAATCCTTAG	59.553	41.667	3.18	0.00	32.02	2.18
323	324	5.047188	CGTTTTGTGGCAAAAATCCTTAGT	58.953	37.500	3.18	0.00	32.02	2.24
324	325	5.174943	CGTTTTGTGGCAAAAATCCTTAGTC	59.825	40.000	3.18	0.00	32.02	2.59
325	326	6.280643	GTTTTGTGGCAAAAATCCTTAGTCT	58.719	36.000	3.18	0.00	32.02	3.24
326	327	5.705609	TTGTGGCAAAAATCCTTAGTCTC	57.294	39.130	0.00	0.00	0.00	3.36
327	328	3.751175	TGTGGCAAAAATCCTTAGTCTCG	59.249	43.478	0.00	0.00	0.00	4.04
328	329	3.127030	GTGGCAAAAATCCTTAGTCTCGG	59.873	47.826	0.00	0.00	0.00	4.63
329	330	3.244770	TGGCAAAAATCCTTAGTCTCGGT	60.245	43.478	0.00	0.00	0.00	4.69
330	331	4.020039	TGGCAAAAATCCTTAGTCTCGGTA	60.020	41.667	0.00	0.00	0.00	4.02
331	332	5.123936	GGCAAAAATCCTTAGTCTCGGTAT	58.876	41.667	0.00	0.00	0.00	2.73
332	333	6.126997	TGGCAAAAATCCTTAGTCTCGGTATA	60.127	38.462	0.00	0.00	0.00	1.47
333	334	6.424207	GGCAAAAATCCTTAGTCTCGGTATAG	59.576	42.308	0.00	0.00	0.00	1.31
334	335	6.985059	GCAAAAATCCTTAGTCTCGGTATAGT	59.015	38.462	0.00	0.00	0.00	2.12
335	336	7.042658	GCAAAAATCCTTAGTCTCGGTATAGTG	60.043	40.741	0.00	0.00	0.00	2.74
336	337	6.651975	AAATCCTTAGTCTCGGTATAGTGG	57.348	41.667	0.00	0.00	0.00	4.00
337	338	4.785346	TCCTTAGTCTCGGTATAGTGGT	57.215	45.455	0.00	0.00	0.00	4.16
338	339	4.458397	TCCTTAGTCTCGGTATAGTGGTG	58.542	47.826	0.00	0.00	0.00	4.17
339	340	3.568853	CCTTAGTCTCGGTATAGTGGTGG	59.431	52.174	0.00	0.00	0.00	4.61
340	341	2.068834	AGTCTCGGTATAGTGGTGGG	57.931	55.000	0.00	0.00	0.00	4.61
341	342	1.038280	GTCTCGGTATAGTGGTGGGG	58.962	60.000	0.00	0.00	0.00	4.96
342	343	0.105862	TCTCGGTATAGTGGTGGGGG	60.106	60.000	0.00	0.00	0.00	5.40
343	344	0.105862	CTCGGTATAGTGGTGGGGGA	60.106	60.000	0.00	0.00	0.00	4.81
344	345	0.339162	TCGGTATAGTGGTGGGGGAA	59.661	55.000	0.00	0.00	0.00	3.97
345	346	1.061967	TCGGTATAGTGGTGGGGGAAT	60.062	52.381	0.00	0.00	0.00	3.01
346	347	2.179645	TCGGTATAGTGGTGGGGGAATA	59.820	50.000	0.00	0.00	0.00	1.75
347	348	2.301009	CGGTATAGTGGTGGGGGAATAC	59.699	54.545	0.00	0.00	0.00	1.89
348	349	2.641321	GGTATAGTGGTGGGGGAATACC	59.359	54.545	0.00	0.00	37.48	2.73
374	375	8.110860	CAATGACTTGGGATAACTTACAAAGT	57.889	34.615	0.00	0.00	45.46	2.66
375	376	9.226606	CAATGACTTGGGATAACTTACAAAGTA	57.773	33.333	0.00	0.00	41.91	2.24
376	377	9.449719	AATGACTTGGGATAACTTACAAAGTAG	57.550	33.333	0.00	0.00	41.91	2.57
377	378	6.877322	TGACTTGGGATAACTTACAAAGTAGC	59.123	38.462	0.00	0.00	41.91	3.58
378	379	6.775708	ACTTGGGATAACTTACAAAGTAGCA	58.224	36.000	0.00	0.00	41.91	3.49
379	380	6.653740	ACTTGGGATAACTTACAAAGTAGCAC	59.346	38.462	0.00	0.00	41.91	4.40
380	381	6.368779	TGGGATAACTTACAAAGTAGCACT	57.631	37.500	0.00	0.00	41.91	4.40
381	382	6.775708	TGGGATAACTTACAAAGTAGCACTT	58.224	36.000	0.00	0.00	41.91	3.16
382	383	6.653320	TGGGATAACTTACAAAGTAGCACTTG	59.347	38.462	2.88	0.00	41.91	3.16
383	384	6.653740	GGGATAACTTACAAAGTAGCACTTGT	59.346	38.462	2.88	1.22	41.91	3.16
384	385	7.148457	GGGATAACTTACAAAGTAGCACTTGTC	60.148	40.741	2.88	0.00	41.91	3.18
385	386	7.603024	GGATAACTTACAAAGTAGCACTTGTCT	59.397	37.037	2.88	0.00	41.91	3.41
386	387	6.604735	AACTTACAAAGTAGCACTTGTCTG	57.395	37.500	2.88	1.58	41.91	3.51
387	388	5.914033	ACTTACAAAGTAGCACTTGTCTGA	58.086	37.500	2.88	0.00	38.66	3.27
388	389	6.525629	ACTTACAAAGTAGCACTTGTCTGAT	58.474	36.000	2.88	0.00	38.66	2.90
389	390	6.992715	ACTTACAAAGTAGCACTTGTCTGATT	59.007	34.615	2.88	0.00	38.66	2.57
390	391	7.499232	ACTTACAAAGTAGCACTTGTCTGATTT	59.501	33.333	2.88	0.00	38.66	2.17
391	392	6.064846	ACAAAGTAGCACTTGTCTGATTTG	57.935	37.500	2.88	0.00	38.66	2.32
392	393	5.009010	ACAAAGTAGCACTTGTCTGATTTGG	59.991	40.000	2.88	0.00	38.66	3.28
393	394	4.623932	AGTAGCACTTGTCTGATTTGGA	57.376	40.909	0.00	0.00	0.00	3.53
394	395	4.973168	AGTAGCACTTGTCTGATTTGGAA	58.027	39.130	0.00	0.00	0.00	3.53
395	396	5.564550	AGTAGCACTTGTCTGATTTGGAAT	58.435	37.500	0.00	0.00	0.00	3.01
396	397	6.711277	AGTAGCACTTGTCTGATTTGGAATA	58.289	36.000	0.00	0.00	0.00	1.75
397	398	6.820656	AGTAGCACTTGTCTGATTTGGAATAG	59.179	38.462	0.00	0.00	0.00	1.73
398	399	4.946157	AGCACTTGTCTGATTTGGAATAGG	59.054	41.667	0.00	0.00	0.00	2.57
399	400	4.702131	GCACTTGTCTGATTTGGAATAGGT	59.298	41.667	0.00	0.00	0.00	3.08
400	401	5.183904	GCACTTGTCTGATTTGGAATAGGTT	59.816	40.000	0.00	0.00	0.00	3.50
401	402	6.294731	GCACTTGTCTGATTTGGAATAGGTTT	60.295	38.462	0.00	0.00	0.00	3.27
402	403	7.086376	CACTTGTCTGATTTGGAATAGGTTTG	58.914	38.462	0.00	0.00	0.00	2.93
403	404	6.777580	ACTTGTCTGATTTGGAATAGGTTTGT	59.222	34.615	0.00	0.00	0.00	2.83
404	405	6.573664	TGTCTGATTTGGAATAGGTTTGTG	57.426	37.500	0.00	0.00	0.00	3.33
405	406	6.303054	TGTCTGATTTGGAATAGGTTTGTGA	58.697	36.000	0.00	0.00	0.00	3.58
406	407	6.206634	TGTCTGATTTGGAATAGGTTTGTGAC	59.793	38.462	0.00	0.00	0.00	3.67
421	422	2.303175	TGTGACCTTTTACACAAGCCC	58.697	47.619	0.00	0.00	42.72	5.19
422	423	1.611977	GTGACCTTTTACACAAGCCCC	59.388	52.381	0.00	0.00	37.05	5.80
423	424	1.215673	TGACCTTTTACACAAGCCCCA	59.784	47.619	0.00	0.00	0.00	4.96
424	425	2.158385	TGACCTTTTACACAAGCCCCAT	60.158	45.455	0.00	0.00	0.00	4.00
425	426	3.074687	TGACCTTTTACACAAGCCCCATA	59.925	43.478	0.00	0.00	0.00	2.74
426	427	4.264172	TGACCTTTTACACAAGCCCCATAT	60.264	41.667	0.00	0.00	0.00	1.78
427	428	4.683643	ACCTTTTACACAAGCCCCATATT	58.316	39.130	0.00	0.00	0.00	1.28
428	429	4.709886	ACCTTTTACACAAGCCCCATATTC	59.290	41.667	0.00	0.00	0.00	1.75
429	430	4.099419	CCTTTTACACAAGCCCCATATTCC	59.901	45.833	0.00	0.00	0.00	3.01
430	431	4.323569	TTTACACAAGCCCCATATTCCA	57.676	40.909	0.00	0.00	0.00	3.53
431	432	2.917713	ACACAAGCCCCATATTCCAA	57.082	45.000	0.00	0.00	0.00	3.53
432	433	3.182887	ACACAAGCCCCATATTCCAAA	57.817	42.857	0.00	0.00	0.00	3.28
435	436	3.451902	CACAAGCCCCATATTCCAAATGT	59.548	43.478	0.00	0.00	0.00	2.71
438	439	5.723887	ACAAGCCCCATATTCCAAATGTTAA	59.276	36.000	0.00	0.00	0.00	2.01
467	468	3.941836	GCGGCAGCATCCTTACGC	61.942	66.667	3.18	0.00	44.35	4.42
468	469	3.630148	CGGCAGCATCCTTACGCG	61.630	66.667	3.53	3.53	0.00	6.01
469	470	2.511600	GGCAGCATCCTTACGCGT	60.512	61.111	19.17	19.17	0.00	6.01
470	471	2.703409	GCAGCATCCTTACGCGTG	59.297	61.111	24.59	5.67	0.00	5.34
485	486	0.108756	GCGTGTGGAAGGACTACTCC	60.109	60.000	0.00	0.00	36.71	3.85
499	500	2.035576	ACTACTCCGACAACAACAGGAC	59.964	50.000	0.00	0.00	0.00	3.85
507	508	0.790207	CAACAACAGGACGATGACGG	59.210	55.000	0.00	0.00	44.46	4.79
509	510	0.895530	ACAACAGGACGATGACGGAT	59.104	50.000	0.00	0.00	44.46	4.18
516	517	0.179171	GACGATGACGGATGTGTCGT	60.179	55.000	0.00	0.00	44.11	4.34
526	527	3.240134	ATGTGTCGTCGGCCAGCTT	62.240	57.895	2.24	0.00	0.00	3.74
529	530	4.373116	GTCGTCGGCCAGCTTGGA	62.373	66.667	2.24	0.00	40.96	3.53
531	532	2.436646	CGTCGGCCAGCTTGGAAT	60.437	61.111	2.24	0.00	40.96	3.01
546	547	3.598019	TGGAATGACGTACCAGGTTAC	57.402	47.619	0.00	0.00	0.00	2.50
547	548	2.234414	TGGAATGACGTACCAGGTTACC	59.766	50.000	0.00	0.00	0.00	2.85
548	549	2.533266	GAATGACGTACCAGGTTACCG	58.467	52.381	0.00	0.43	0.00	4.02
549	550	1.549203	ATGACGTACCAGGTTACCGT	58.451	50.000	10.45	10.45	0.00	4.83
550	551	0.881118	TGACGTACCAGGTTACCGTC	59.119	55.000	22.70	22.70	45.88	4.79
551	552	0.171231	GACGTACCAGGTTACCGTCC	59.829	60.000	20.46	9.01	41.37	4.79
552	553	1.137404	CGTACCAGGTTACCGTCCG	59.863	63.158	0.00	0.00	0.00	4.79
553	554	1.153765	GTACCAGGTTACCGTCCGC	60.154	63.158	0.00	0.00	0.00	5.54
554	555	1.304381	TACCAGGTTACCGTCCGCT	60.304	57.895	0.00	0.00	0.00	5.52
555	556	0.034574	TACCAGGTTACCGTCCGCTA	60.035	55.000	0.00	0.00	0.00	4.26
556	557	1.140375	CCAGGTTACCGTCCGCTAC	59.860	63.158	0.00	0.00	0.00	3.58
557	558	1.597797	CCAGGTTACCGTCCGCTACA	61.598	60.000	0.00	0.00	0.00	2.74
558	559	0.244450	CAGGTTACCGTCCGCTACAA	59.756	55.000	0.00	0.00	0.00	2.41
565	566	0.172803	CCGTCCGCTACAAGCTAGTT	59.827	55.000	0.00	0.00	39.60	2.24
570	571	4.565564	CGTCCGCTACAAGCTAGTTTAATT	59.434	41.667	0.00	0.00	39.60	1.40
573	574	7.201461	CGTCCGCTACAAGCTAGTTTAATTAAA	60.201	37.037	6.54	6.54	39.60	1.52
574	575	8.445493	GTCCGCTACAAGCTAGTTTAATTAAAA	58.555	33.333	12.14	0.00	39.60	1.52
575	576	9.001542	TCCGCTACAAGCTAGTTTAATTAAAAA	57.998	29.630	12.14	3.58	39.60	1.94
610	613	5.529800	CGGATGAAATACCGTCCCTTTTATT	59.470	40.000	0.00	0.00	43.53	1.40
670	679	6.738114	TGAGAATCATCTGGTTTGTTCAAAC	58.262	36.000	16.95	16.95	42.56	2.93
688	698	4.608948	AAACCCGGTTTGAAATATTGCA	57.391	36.364	14.99	0.00	34.23	4.08
691	701	3.192633	ACCCGGTTTGAAATATTGCAGAC	59.807	43.478	8.34	8.34	0.00	3.51
693	703	4.165779	CCGGTTTGAAATATTGCAGACAC	58.834	43.478	16.77	6.67	0.00	3.67
704	714	0.324614	TGCAGACACGGTTGGATGAT	59.675	50.000	0.00	0.00	0.00	2.45
707	717	2.910199	CAGACACGGTTGGATGATCAT	58.090	47.619	8.25	8.25	0.00	2.45
708	718	3.273434	CAGACACGGTTGGATGATCATT	58.727	45.455	10.14	0.00	0.00	2.57
709	719	3.310774	CAGACACGGTTGGATGATCATTC	59.689	47.826	10.14	8.56	0.00	2.67
711	721	3.273434	ACACGGTTGGATGATCATTCTG	58.727	45.455	15.17	7.04	0.00	3.02
712	722	3.273434	CACGGTTGGATGATCATTCTGT	58.727	45.455	15.17	11.28	0.00	3.41
713	723	4.081142	ACACGGTTGGATGATCATTCTGTA	60.081	41.667	15.17	0.00	0.00	2.74
714	724	5.059161	CACGGTTGGATGATCATTCTGTAT	58.941	41.667	15.17	0.00	0.00	2.29
725	735	6.136155	TGATCATTCTGTATCACTGTCCCTA	58.864	40.000	0.00	0.00	0.00	3.53
752	762	3.125146	TGAGCATGTTCGCAGACAAATAC	59.875	43.478	5.02	0.00	34.32	1.89
768	778	1.664321	ATACAGTGTCCCGGAGCGTC	61.664	60.000	0.73	0.00	0.00	5.19
776	786	2.278857	CCGGAGCGTCGAAGATGG	60.279	66.667	1.37	0.00	45.11	3.51
790	800	6.156519	GTCGAAGATGGCCTAAACAAAATTT	58.843	36.000	3.32	0.00	40.67	1.82
797	807	5.406649	TGGCCTAAACAAAATTTCATAGCG	58.593	37.500	3.32	0.00	0.00	4.26
821	831	2.434884	AGCGTCCAACATGGCTCG	60.435	61.111	0.00	8.59	37.47	5.03
913	925	2.370445	CCCTCCGTGGCTCAATCCT	61.370	63.158	0.00	0.00	0.00	3.24
1047	1060	0.814010	CATCGACCGACCAAATCCCC	60.814	60.000	0.00	0.00	0.00	4.81
1048	1061	0.981277	ATCGACCGACCAAATCCCCT	60.981	55.000	0.00	0.00	0.00	4.79
1049	1062	1.153429	CGACCGACCAAATCCCCTC	60.153	63.158	0.00	0.00	0.00	4.30
1050	1063	1.614241	CGACCGACCAAATCCCCTCT	61.614	60.000	0.00	0.00	0.00	3.69
1051	1064	0.178301	GACCGACCAAATCCCCTCTC	59.822	60.000	0.00	0.00	0.00	3.20
1081	1100	1.764054	CCGGCTCCCCAATCTCTCT	60.764	63.158	0.00	0.00	0.00	3.10
1266	1286	1.292223	CTCGGCGAGGAGGAAAACA	59.708	57.895	28.52	0.00	0.00	2.83
1275	1295	1.625818	AGGAGGAAAACACTCTGCGAT	59.374	47.619	0.00	0.00	35.34	4.58
1390	1416	0.883833	CAAGGCAAGATTTGTCCGCT	59.116	50.000	0.00	0.00	35.39	5.52
1392	1418	0.250901	AGGCAAGATTTGTCCGCTGT	60.251	50.000	0.00	0.00	35.39	4.40
1393	1419	0.169009	GGCAAGATTTGTCCGCTGTC	59.831	55.000	0.00	0.00	0.00	3.51
1662	1698	4.399395	TTGAGCGGGGCTGAGCTG	62.399	66.667	3.72	0.00	44.69	4.24
1707	1743	0.393537	AGCTTGCGCAGGCTAATTCT	60.394	50.000	41.22	19.98	42.25	2.40
1733	1769	5.665812	AGATGTTAGCAGTAAGTTATCCCCA	59.334	40.000	0.00	0.00	0.00	4.96
1769	1805	3.732048	ACTCCATTGTCCCCGTTTTAT	57.268	42.857	0.00	0.00	0.00	1.40
1786	1822	5.499652	CGTTTTATAACCGTGGACTTGATCG	60.500	44.000	0.00	0.00	0.00	3.69
1814	1850	2.946329	TCACGAGGCTAATCTCTGTCTC	59.054	50.000	0.00	0.00	0.00	3.36
2065	2102	9.984190	CTTGAGGTATATCATATCATCTGATGG	57.016	37.037	17.06	1.88	35.12	3.51
2083	2120	1.563111	GGCAAATGTTCATGATGCCG	58.437	50.000	18.81	0.00	46.11	5.69
2386	2426	4.445453	TGGTGCATACATCTCTTCACATC	58.555	43.478	0.00	0.00	0.00	3.06
2516	2556	2.298163	AGACGGTAAGTAACACCCACAG	59.702	50.000	0.00	0.00	31.96	3.66
2517	2557	1.270465	ACGGTAAGTAACACCCACAGC	60.270	52.381	0.00	0.00	31.96	4.40
2608	2648	1.970917	GCAAGTCCATGAGAACGCCG	61.971	60.000	0.00	0.00	0.00	6.46
2713	2753	1.596934	GTGGGAGCTGGATTCGTCA	59.403	57.895	0.00	0.00	0.00	4.35
2719	2759	0.035317	AGCTGGATTCGTCAGTGCAA	59.965	50.000	0.00	0.00	34.89	4.08
2905	2945	7.543868	TGCGATTATTTGTTTATTCTTTGGTGG	59.456	33.333	0.00	0.00	0.00	4.61
2918	2958	1.064003	TTGGTGGCCTTCTGCTTCTA	58.936	50.000	3.32	0.00	40.92	2.10
2919	2959	1.064003	TGGTGGCCTTCTGCTTCTAA	58.936	50.000	3.32	0.00	40.92	2.10
2944	3004	0.041047	CAGCGGTGTGTGTGATTGTG	60.041	55.000	6.41	0.00	0.00	3.33
2948	3008	0.030638	GGTGTGTGTGATTGTGGTGC	59.969	55.000	0.00	0.00	0.00	5.01
2955	3015	2.032799	GTGTGATTGTGGTGCGAAAGAA	59.967	45.455	0.00	0.00	0.00	2.52
2956	3016	2.884012	TGTGATTGTGGTGCGAAAGAAT	59.116	40.909	0.00	0.00	0.00	2.40
2957	3017	3.236816	GTGATTGTGGTGCGAAAGAATG	58.763	45.455	0.00	0.00	0.00	2.67
2958	3018	2.228582	TGATTGTGGTGCGAAAGAATGG	59.771	45.455	0.00	0.00	0.00	3.16
2959	3019	0.313672	TTGTGGTGCGAAAGAATGGC	59.686	50.000	0.00	0.00	0.00	4.40
2960	3020	0.821301	TGTGGTGCGAAAGAATGGCA	60.821	50.000	0.00	0.00	40.78	4.92
2974	3034	4.972875	GGCACAGAAGCTAGCCAT	57.027	55.556	12.13	0.00	46.26	4.40
3001	3061	2.435372	TGAGGTTCAACTGGCAAACT	57.565	45.000	0.34	0.00	0.00	2.66
3009	3069	4.572985	TCAACTGGCAAACTGATTCAAG	57.427	40.909	0.00	0.00	0.00	3.02
3029	3089	5.412594	TCAAGTAATTTGTCCATCACTCTGC	59.587	40.000	0.00	0.00	38.01	4.26
3030	3090	5.171339	AGTAATTTGTCCATCACTCTGCT	57.829	39.130	0.00	0.00	0.00	4.24
3031	3091	5.564550	AGTAATTTGTCCATCACTCTGCTT	58.435	37.500	0.00	0.00	0.00	3.91
3032	3092	5.645497	AGTAATTTGTCCATCACTCTGCTTC	59.355	40.000	0.00	0.00	0.00	3.86
3035	3100	4.824479	TTGTCCATCACTCTGCTTCATA	57.176	40.909	0.00	0.00	0.00	2.15
3053	3118	5.619132	TCATAGGCAAAGAGACATGATGA	57.381	39.130	0.00	0.00	0.00	2.92
3054	3119	5.363101	TCATAGGCAAAGAGACATGATGAC	58.637	41.667	0.00	0.00	0.00	3.06
3056	3121	3.607741	AGGCAAAGAGACATGATGACAG	58.392	45.455	0.00	0.00	0.00	3.51
3057	3122	3.008813	AGGCAAAGAGACATGATGACAGT	59.991	43.478	0.00	0.00	0.00	3.55
3058	3123	3.373439	GGCAAAGAGACATGATGACAGTC	59.627	47.826	0.00	0.00	0.00	3.51
3059	3124	3.999001	GCAAAGAGACATGATGACAGTCA	59.001	43.478	5.50	5.50	34.80	3.41
3060	3125	4.142945	GCAAAGAGACATGATGACAGTCAC	60.143	45.833	5.05	0.80	34.80	3.67
3061	3126	3.883830	AGAGACATGATGACAGTCACC	57.116	47.619	5.05	0.00	34.80	4.02
3121	4300	3.960102	TCACCAAAAGTTGCAGGAGAAAT	59.040	39.130	0.00	0.00	0.00	2.17
3148	4337	5.234466	ACAGCTTGGAAGATTCTGTAACT	57.766	39.130	0.00	0.00	36.37	2.24
3149	4338	6.360370	ACAGCTTGGAAGATTCTGTAACTA	57.640	37.500	0.00	0.00	36.37	2.24
3150	4339	6.951971	ACAGCTTGGAAGATTCTGTAACTAT	58.048	36.000	0.00	0.00	36.37	2.12
3153	4342	8.821894	CAGCTTGGAAGATTCTGTAACTATAAC	58.178	37.037	0.00	0.00	0.00	1.89
3154	4343	8.540388	AGCTTGGAAGATTCTGTAACTATAACA	58.460	33.333	0.00	0.00	0.00	2.41
3155	4344	8.821894	GCTTGGAAGATTCTGTAACTATAACAG	58.178	37.037	0.00	0.00	44.66	3.16
3173	4362	7.692460	ATAACAGAGACATGAATCTTTTGCA	57.308	32.000	0.00	0.00	0.00	4.08
3186	4375	9.976511	ATGAATCTTTTGCACATATTCCATTAG	57.023	29.630	0.00	0.00	0.00	1.73
3216	4405	4.358851	TCATTTGGTGCTTGAAAACGAAG	58.641	39.130	0.00	0.00	0.00	3.79
3235	4424	2.433436	AGTTTAAGCCAATCCGTCACC	58.567	47.619	0.00	0.00	0.00	4.02
3266	4455	6.040209	TCATAATTGGCAGAAGCAAAATGT	57.960	33.333	0.00	0.00	44.61	2.71
3291	4480	0.673022	CACCAGTGCAAGAGCTCTCC	60.673	60.000	18.55	11.90	42.28	3.71
3307	4496	4.782156	AGCTCTCCCCCTATGAGATATTTG	59.218	45.833	0.00	0.00	38.16	2.32
3317	4506	9.578576	CCCCTATGAGATATTTGATTCTTTTCA	57.421	33.333	0.00	0.00	0.00	2.69
3343	4532	1.694150	GGGCATCTCAGCATACCTGTA	59.306	52.381	0.00	0.00	42.38	2.74
3344	4533	2.304180	GGGCATCTCAGCATACCTGTAT	59.696	50.000	0.00	0.00	42.38	2.29
3345	4534	3.244700	GGGCATCTCAGCATACCTGTATT	60.245	47.826	0.00	0.00	42.38	1.89
3346	4535	3.750130	GGCATCTCAGCATACCTGTATTG	59.250	47.826	0.00	0.00	42.38	1.90
3347	4536	4.384056	GCATCTCAGCATACCTGTATTGT	58.616	43.478	0.00	0.00	42.38	2.71
3348	4537	5.511373	GGCATCTCAGCATACCTGTATTGTA	60.511	44.000	0.00	0.00	42.38	2.41
3349	4538	5.406780	GCATCTCAGCATACCTGTATTGTAC	59.593	44.000	0.00	0.00	42.38	2.90
3409	4599	6.349243	TGCATGAAAGAACTGGAAATCATT	57.651	33.333	0.00	0.00	0.00	2.57
3503	4693	3.099141	CAGGTACAATTTTCCCCTGCAT	58.901	45.455	0.00	0.00	36.58	3.96
3531	4721	5.123227	AGAAGGAAATCTCAAACACGTTCA	58.877	37.500	0.00	0.00	0.00	3.18
3532	4722	5.588648	AGAAGGAAATCTCAAACACGTTCAA	59.411	36.000	0.00	0.00	0.00	2.69
3533	4723	5.424121	AGGAAATCTCAAACACGTTCAAG	57.576	39.130	0.00	0.00	0.00	3.02
3534	4724	5.123227	AGGAAATCTCAAACACGTTCAAGA	58.877	37.500	0.00	0.00	0.00	3.02
3535	4725	5.588648	AGGAAATCTCAAACACGTTCAAGAA	59.411	36.000	0.00	0.00	0.00	2.52
3536	4726	5.909610	GGAAATCTCAAACACGTTCAAGAAG	59.090	40.000	0.00	0.00	0.00	2.85
3537	4727	3.944422	TCTCAAACACGTTCAAGAAGC	57.056	42.857	0.00	0.00	0.00	3.86
3538	4728	2.612212	TCTCAAACACGTTCAAGAAGCC	59.388	45.455	0.00	0.00	0.00	4.35
3539	4729	2.354510	CTCAAACACGTTCAAGAAGCCA	59.645	45.455	0.00	0.00	0.00	4.75
3540	4730	2.750166	TCAAACACGTTCAAGAAGCCAA	59.250	40.909	0.00	0.00	0.00	4.52
3541	4731	3.191581	TCAAACACGTTCAAGAAGCCAAA	59.808	39.130	0.00	0.00	0.00	3.28
3542	4732	2.844122	ACACGTTCAAGAAGCCAAAC	57.156	45.000	0.00	0.00	0.00	2.93
3543	4733	1.404035	ACACGTTCAAGAAGCCAAACC	59.596	47.619	0.00	0.00	0.00	3.27
3544	4734	1.403679	CACGTTCAAGAAGCCAAACCA	59.596	47.619	0.00	0.00	0.00	3.67
3584	4774	7.826690	ACTAAAAACATGGCGTCAGATTTTAT	58.173	30.769	12.74	7.50	0.00	1.40
3594	4784	4.662145	CGTCAGATTTTATTGTCCTTGCC	58.338	43.478	0.00	0.00	0.00	4.52
3595	4785	4.155826	CGTCAGATTTTATTGTCCTTGCCA	59.844	41.667	0.00	0.00	0.00	4.92
3600	4790	8.811017	TCAGATTTTATTGTCCTTGCCAAAATA	58.189	29.630	0.00	0.00	0.00	1.40
3610	4800	2.141535	TGCCAAAATAAACGCACCAC	57.858	45.000	0.00	0.00	0.00	4.16
3633	4823	6.093082	CACAACAGATCAAAGTGCTATGATGA	59.907	38.462	0.00	0.00	36.45	2.92
3635	4825	5.366460	ACAGATCAAAGTGCTATGATGAGG	58.634	41.667	0.00	0.00	36.45	3.86
3636	4826	5.129980	ACAGATCAAAGTGCTATGATGAGGA	59.870	40.000	0.00	0.00	36.45	3.71
3637	4827	6.053650	CAGATCAAAGTGCTATGATGAGGAA	58.946	40.000	0.00	0.00	36.45	3.36
3638	4828	6.711194	CAGATCAAAGTGCTATGATGAGGAAT	59.289	38.462	0.00	0.00	36.45	3.01
3640	4830	6.688637	TCAAAGTGCTATGATGAGGAATTG	57.311	37.500	0.00	0.00	0.00	2.32
3641	4831	6.417258	TCAAAGTGCTATGATGAGGAATTGA	58.583	36.000	0.00	0.00	0.00	2.57
3642	4832	6.541278	TCAAAGTGCTATGATGAGGAATTGAG	59.459	38.462	0.00	0.00	0.00	3.02
3643	4833	4.970711	AGTGCTATGATGAGGAATTGAGG	58.029	43.478	0.00	0.00	0.00	3.86
3655	4852	4.583871	AGGAATTGAGGACACATGAAGAC	58.416	43.478	0.00	0.00	0.00	3.01
3656	4853	3.372206	GGAATTGAGGACACATGAAGACG	59.628	47.826	0.00	0.00	0.00	4.18
3659	4856	1.272490	TGAGGACACATGAAGACGGAC	59.728	52.381	0.00	0.00	0.00	4.79
3680	4907	6.455646	CGGACAATCTAACAAGATAACAGTGC	60.456	42.308	0.00	0.00	0.00	4.40
3685	4912	8.725148	CAATCTAACAAGATAACAGTGCTTCTT	58.275	33.333	0.00	0.00	0.00	2.52
3688	4915	5.113502	ACAAGATAACAGTGCTTCTTTGC	57.886	39.130	0.00	0.00	0.00	3.68
3691	4918	3.433615	AGATAACAGTGCTTCTTTGCGTC	59.566	43.478	0.00	0.00	35.36	5.19
3754	4981	8.500753	TGTATCCAACAACACTAATATGTTCC	57.499	34.615	0.00	0.00	40.89	3.62
3755	4982	7.554835	TGTATCCAACAACACTAATATGTTCCC	59.445	37.037	0.00	0.00	40.89	3.97
3756	4983	5.258051	TCCAACAACACTAATATGTTCCCC	58.742	41.667	0.00	0.00	40.89	4.81
3757	4984	5.014755	TCCAACAACACTAATATGTTCCCCT	59.985	40.000	0.00	0.00	40.89	4.79
3758	4985	6.215841	TCCAACAACACTAATATGTTCCCCTA	59.784	38.462	0.00	0.00	40.89	3.53
3759	4986	6.887545	CCAACAACACTAATATGTTCCCCTAA	59.112	38.462	0.00	0.00	40.89	2.69
3760	4987	7.394923	CCAACAACACTAATATGTTCCCCTAAA	59.605	37.037	0.00	0.00	40.89	1.85
3761	4988	8.798402	CAACAACACTAATATGTTCCCCTAAAA	58.202	33.333	0.00	0.00	40.89	1.52
3762	4989	8.943594	ACAACACTAATATGTTCCCCTAAAAA	57.056	30.769	0.00	0.00	40.89	1.94
3783	5010	4.668576	AAATACGAATATGCTGATGCCG	57.331	40.909	0.00	0.00	38.71	5.69
3784	5011	3.592898	ATACGAATATGCTGATGCCGA	57.407	42.857	0.00	0.00	38.71	5.54
3785	5012	1.502231	ACGAATATGCTGATGCCGAC	58.498	50.000	0.00	0.00	38.71	4.79
3786	5013	1.202521	ACGAATATGCTGATGCCGACA	60.203	47.619	0.00	0.00	38.71	4.35
3787	5014	1.458445	CGAATATGCTGATGCCGACAG	59.542	52.381	0.00	0.00	38.71	3.51
3788	5015	2.759191	GAATATGCTGATGCCGACAGA	58.241	47.619	0.00	0.00	37.54	3.41
3789	5016	2.916702	ATATGCTGATGCCGACAGAA	57.083	45.000	0.00	0.00	37.54	3.02
3790	5017	2.916702	TATGCTGATGCCGACAGAAT	57.083	45.000	0.00	0.00	37.41	2.40
3791	5018	2.048444	ATGCTGATGCCGACAGAATT	57.952	45.000	0.00	0.00	37.54	2.17
3792	5019	1.825090	TGCTGATGCCGACAGAATTT	58.175	45.000	0.00	0.00	37.54	1.82
3793	5020	2.984562	TGCTGATGCCGACAGAATTTA	58.015	42.857	0.00	0.00	37.54	1.40
3794	5021	2.938451	TGCTGATGCCGACAGAATTTAG	59.062	45.455	0.00	0.00	37.54	1.85
3795	5022	2.286654	GCTGATGCCGACAGAATTTAGC	60.287	50.000	0.00	0.00	37.54	3.09
3796	5023	3.201290	CTGATGCCGACAGAATTTAGCT	58.799	45.455	0.00	0.00	37.54	3.32
3797	5024	2.938451	TGATGCCGACAGAATTTAGCTG	59.062	45.455	0.00	0.00	39.26	4.24
3798	5025	1.086696	TGCCGACAGAATTTAGCTGC	58.913	50.000	0.00	0.00	36.86	5.25
3799	5026	1.086696	GCCGACAGAATTTAGCTGCA	58.913	50.000	1.02	0.00	36.86	4.41
3800	5027	1.202076	GCCGACAGAATTTAGCTGCAC	60.202	52.381	1.02	0.00	36.86	4.57
3801	5028	2.350522	CCGACAGAATTTAGCTGCACT	58.649	47.619	1.02	0.00	36.86	4.40
3802	5029	2.349886	CCGACAGAATTTAGCTGCACTC	59.650	50.000	1.02	0.00	36.86	3.51
3803	5030	3.257393	CGACAGAATTTAGCTGCACTCT	58.743	45.455	1.02	0.00	36.86	3.24
3804	5031	3.061831	CGACAGAATTTAGCTGCACTCTG	59.938	47.826	1.02	13.21	36.86	3.35
3805	5032	4.248859	GACAGAATTTAGCTGCACTCTGA	58.751	43.478	18.84	0.00	36.86	3.27
3818	5045	5.290643	GCTGCACTCTGAACTCACTTATAAG	59.709	44.000	11.05	11.05	0.00	1.73
3828	5055	9.760660	CTGAACTCACTTATAAGCAAAATACAC	57.239	33.333	12.54	0.00	0.00	2.90
3852	5080	9.057089	CACCAGAAAATATAGGTTCAAGGTATC	57.943	37.037	11.62	0.00	34.56	2.24
3859	5087	3.721087	AGGTTCAAGGTATCCAGGTTG	57.279	47.619	0.00	0.00	0.00	3.77
3874	5102	3.136443	CCAGGTTGTAGAGGGATATGCAA	59.864	47.826	0.00	0.00	0.00	4.08
3888	5116	4.397417	GGATATGCAATTCTGGATGTAGGC	59.603	45.833	0.00	0.00	34.98	3.93
3889	5117	2.057137	TGCAATTCTGGATGTAGGCC	57.943	50.000	0.00	0.00	0.00	5.19
3890	5118	0.947244	GCAATTCTGGATGTAGGCCG	59.053	55.000	0.00	0.00	0.00	6.13
3891	5119	1.475034	GCAATTCTGGATGTAGGCCGA	60.475	52.381	0.00	0.00	0.00	5.54
3892	5120	2.213499	CAATTCTGGATGTAGGCCGAC	58.787	52.381	9.38	9.38	0.00	4.79
3893	5121	1.794714	ATTCTGGATGTAGGCCGACT	58.205	50.000	17.46	2.65	0.00	4.18
3894	5122	0.824109	TTCTGGATGTAGGCCGACTG	59.176	55.000	17.46	2.94	0.00	3.51
3895	5123	1.227380	CTGGATGTAGGCCGACTGC	60.227	63.158	17.46	8.63	40.16	4.40
3896	5124	1.960040	CTGGATGTAGGCCGACTGCA	61.960	60.000	17.46	12.31	46.03	4.41
3897	5125	1.227380	GGATGTAGGCCGACTGCAG	60.227	63.158	17.46	13.48	45.17	4.41
3898	5126	1.884926	GATGTAGGCCGACTGCAGC	60.885	63.158	15.27	5.81	45.17	5.25
3899	5127	3.723235	ATGTAGGCCGACTGCAGCG	62.723	63.158	15.27	17.81	45.17	5.18
3911	5139	3.403277	GCAGCGGCATACTGACAG	58.597	61.111	3.18	0.00	40.72	3.51
3914	5142	1.215244	CAGCGGCATACTGACAGATG	58.785	55.000	10.08	9.60	37.32	2.90
3932	5160	4.565962	CAGATGTGCTCACTCTCATTGTAC	59.434	45.833	1.47	0.00	0.00	2.90
3944	5184	9.457436	TCACTCTCATTGTACAGTGTTAGTATA	57.543	33.333	16.89	10.38	37.97	1.47
3979	5220	7.745620	AATACTTCAGACGAAAATTCCAAGT	57.254	32.000	0.00	0.00	0.00	3.16

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
7	8	4.035102	GAAGCGTTCAGGGGCCCT	62.035	66.667	22.67	22.67	0.00	5.19
9	10	3.569200	AAGGAAGCGTTCAGGGGCC	62.569	63.158	0.00	0.00	0.00	5.80
10	11	2.034221	AAGGAAGCGTTCAGGGGC	59.966	61.111	0.00	0.00	0.00	5.80
11	12	1.073199	ACAAGGAAGCGTTCAGGGG	59.927	57.895	0.00	0.00	0.00	4.79
12	13	0.535102	ACACAAGGAAGCGTTCAGGG	60.535	55.000	0.00	0.00	0.00	4.45
13	14	2.163818	TACACAAGGAAGCGTTCAGG	57.836	50.000	0.00	0.00	0.00	3.86
14	15	3.325870	TGATACACAAGGAAGCGTTCAG	58.674	45.455	0.00	0.00	0.00	3.02
15	16	3.394674	TGATACACAAGGAAGCGTTCA	57.605	42.857	0.00	0.00	0.00	3.18
16	17	4.508124	CCTATGATACACAAGGAAGCGTTC	59.492	45.833	0.00	0.00	32.50	3.95
17	18	4.081087	ACCTATGATACACAAGGAAGCGTT	60.081	41.667	0.00	0.00	33.87	4.84
18	19	3.451178	ACCTATGATACACAAGGAAGCGT	59.549	43.478	0.00	0.00	33.87	5.07
19	20	4.060038	ACCTATGATACACAAGGAAGCG	57.940	45.455	0.00	0.00	33.87	4.68
20	21	7.815068	CAGTATACCTATGATACACAAGGAAGC	59.185	40.741	0.00	0.00	33.05	3.86
21	22	8.861086	ACAGTATACCTATGATACACAAGGAAG	58.139	37.037	0.00	0.00	33.05	3.46
22	23	8.777578	ACAGTATACCTATGATACACAAGGAA	57.222	34.615	0.00	0.00	33.05	3.36
23	24	8.638873	CAACAGTATACCTATGATACACAAGGA	58.361	37.037	0.00	0.00	33.05	3.36
24	25	8.421784	ACAACAGTATACCTATGATACACAAGG	58.578	37.037	0.00	0.00	33.05	3.61
25	26	9.464714	GACAACAGTATACCTATGATACACAAG	57.535	37.037	0.00	0.00	33.05	3.16
26	27	9.197306	AGACAACAGTATACCTATGATACACAA	57.803	33.333	0.00	0.00	33.05	3.33
27	28	8.762481	AGACAACAGTATACCTATGATACACA	57.238	34.615	0.00	0.00	33.05	3.72
47	48	7.295201	GCAAACGAGATATTGTTGTTAGACAA	58.705	34.615	0.00	0.00	43.08	3.18
48	49	6.400621	CGCAAACGAGATATTGTTGTTAGACA	60.401	38.462	0.00	0.00	43.93	3.41
49	50	5.952064	CGCAAACGAGATATTGTTGTTAGAC	59.048	40.000	0.00	0.00	43.93	2.59
50	51	5.445407	GCGCAAACGAGATATTGTTGTTAGA	60.445	40.000	0.30	0.00	43.93	2.10
51	52	4.723862	GCGCAAACGAGATATTGTTGTTAG	59.276	41.667	0.30	0.00	43.93	2.34
52	53	4.152580	TGCGCAAACGAGATATTGTTGTTA	59.847	37.500	8.16	0.00	43.93	2.41
53	54	3.058570	TGCGCAAACGAGATATTGTTGTT	60.059	39.130	8.16	0.00	43.93	2.83
54	55	2.482336	TGCGCAAACGAGATATTGTTGT	59.518	40.909	8.16	0.00	43.93	3.32
55	56	2.840176	GTGCGCAAACGAGATATTGTTG	59.160	45.455	14.00	0.00	43.93	3.33
56	57	2.159572	GGTGCGCAAACGAGATATTGTT	60.160	45.455	14.00	0.00	43.93	2.83
57	58	1.396996	GGTGCGCAAACGAGATATTGT	59.603	47.619	14.00	0.00	43.93	2.71
58	59	1.665679	AGGTGCGCAAACGAGATATTG	59.334	47.619	14.00	0.00	43.93	1.90
59	60	1.665679	CAGGTGCGCAAACGAGATATT	59.334	47.619	14.00	0.00	43.93	1.28
60	61	1.134818	TCAGGTGCGCAAACGAGATAT	60.135	47.619	14.00	0.00	43.93	1.63
61	62	0.245266	TCAGGTGCGCAAACGAGATA	59.755	50.000	14.00	0.00	43.93	1.98
62	63	1.005037	TCAGGTGCGCAAACGAGAT	60.005	52.632	14.00	0.00	43.93	2.75
63	64	1.664649	CTCAGGTGCGCAAACGAGA	60.665	57.895	14.00	11.08	43.93	4.04
64	65	1.621301	CTCTCAGGTGCGCAAACGAG	61.621	60.000	14.00	17.86	43.93	4.18
65	66	1.664649	CTCTCAGGTGCGCAAACGA	60.665	57.895	14.00	7.78	43.93	3.85
66	67	2.671177	CCTCTCAGGTGCGCAAACG	61.671	63.158	14.00	2.66	44.07	3.60
67	68	3.257933	CCTCTCAGGTGCGCAAAC	58.742	61.111	14.00	8.77	0.00	2.93
75	76	3.900016	GCTCGTGCAAACCTCTCAGGT	62.900	57.143	4.26	0.00	44.77	4.00
76	77	1.294659	GCTCGTGCAAACCTCTCAGG	61.295	60.000	4.26	0.00	39.31	3.86
77	78	0.320247	AGCTCGTGCAAACCTCTCAG	60.320	55.000	12.58	0.00	42.74	3.35
78	79	0.106708	AAGCTCGTGCAAACCTCTCA	59.893	50.000	12.58	0.00	42.74	3.27
79	80	1.069636	CAAAGCTCGTGCAAACCTCTC	60.070	52.381	12.58	0.00	42.74	3.20
80	81	0.947244	CAAAGCTCGTGCAAACCTCT	59.053	50.000	12.58	0.00	42.74	3.69
81	82	0.661483	GCAAAGCTCGTGCAAACCTC	60.661	55.000	15.55	0.00	41.80	3.85
82	83	1.360192	GCAAAGCTCGTGCAAACCT	59.640	52.632	15.55	0.00	41.80	3.50
83	84	1.661509	GGCAAAGCTCGTGCAAACC	60.662	57.895	20.43	3.83	44.07	3.27
84	85	0.591170	TAGGCAAAGCTCGTGCAAAC	59.409	50.000	20.43	6.78	44.07	2.93
85	86	0.591170	GTAGGCAAAGCTCGTGCAAA	59.409	50.000	20.43	7.87	44.07	3.68
86	87	1.565156	CGTAGGCAAAGCTCGTGCAA	61.565	55.000	20.43	8.17	44.07	4.08
87	88	2.027073	CGTAGGCAAAGCTCGTGCA	61.027	57.895	20.43	2.24	44.07	4.57
88	89	1.566018	AACGTAGGCAAAGCTCGTGC	61.566	55.000	12.76	12.76	41.45	5.34
89	90	0.163788	CAACGTAGGCAAAGCTCGTG	59.836	55.000	0.00	0.00	33.39	4.35
90	91	0.249741	ACAACGTAGGCAAAGCTCGT	60.250	50.000	0.00	0.00	34.05	4.18
91	92	0.865769	AACAACGTAGGCAAAGCTCG	59.134	50.000	0.00	0.00	0.00	5.03
92	93	1.871039	TGAACAACGTAGGCAAAGCTC	59.129	47.619	0.00	0.00	0.00	4.09
93	94	1.873591	CTGAACAACGTAGGCAAAGCT	59.126	47.619	0.00	0.00	0.00	3.74
94	95	1.663161	GCTGAACAACGTAGGCAAAGC	60.663	52.381	0.00	0.00	0.00	3.51
95	96	1.873591	AGCTGAACAACGTAGGCAAAG	59.126	47.619	0.00	0.00	0.00	2.77
96	97	1.961793	AGCTGAACAACGTAGGCAAA	58.038	45.000	0.00	0.00	0.00	3.68
97	98	2.224090	TGTAGCTGAACAACGTAGGCAA	60.224	45.455	0.00	0.00	0.00	4.52
98	99	1.341852	TGTAGCTGAACAACGTAGGCA	59.658	47.619	0.00	0.00	0.00	4.75
99	100	2.074547	TGTAGCTGAACAACGTAGGC	57.925	50.000	0.00	0.00	0.00	3.93
100	101	3.650139	ACTTGTAGCTGAACAACGTAGG	58.350	45.455	0.00	0.00	35.56	3.18
101	102	4.143597	CGAACTTGTAGCTGAACAACGTAG	60.144	45.833	0.00	0.00	35.56	3.51
102	103	3.732219	CGAACTTGTAGCTGAACAACGTA	59.268	43.478	0.00	0.00	35.56	3.57
103	104	2.538449	CGAACTTGTAGCTGAACAACGT	59.462	45.455	0.00	0.00	35.56	3.99
104	105	2.792674	TCGAACTTGTAGCTGAACAACG	59.207	45.455	0.00	0.48	35.56	4.10
105	106	3.059800	GGTCGAACTTGTAGCTGAACAAC	60.060	47.826	0.00	0.00	35.56	3.32
106	107	3.128349	GGTCGAACTTGTAGCTGAACAA	58.872	45.455	0.00	0.00	37.75	2.83
107	108	2.750948	GGTCGAACTTGTAGCTGAACA	58.249	47.619	0.00	0.00	0.00	3.18
108	109	1.719780	CGGTCGAACTTGTAGCTGAAC	59.280	52.381	0.00	0.00	0.00	3.18
109	110	1.610038	TCGGTCGAACTTGTAGCTGAA	59.390	47.619	0.00	0.00	0.00	3.02
110	111	1.241165	TCGGTCGAACTTGTAGCTGA	58.759	50.000	0.00	0.00	0.00	4.26
111	112	1.986378	CTTCGGTCGAACTTGTAGCTG	59.014	52.381	0.00	0.00	0.00	4.24
112	113	1.612463	ACTTCGGTCGAACTTGTAGCT	59.388	47.619	0.00	0.00	0.00	3.32
113	114	1.984297	GACTTCGGTCGAACTTGTAGC	59.016	52.381	0.00	0.00	35.10	3.58
114	115	2.030540	TGGACTTCGGTCGAACTTGTAG	60.031	50.000	0.00	0.00	45.31	2.74
115	116	1.955778	TGGACTTCGGTCGAACTTGTA	59.044	47.619	0.00	0.00	45.31	2.41
116	117	0.748450	TGGACTTCGGTCGAACTTGT	59.252	50.000	0.00	0.00	45.31	3.16
117	118	2.080286	ATGGACTTCGGTCGAACTTG	57.920	50.000	0.00	0.00	45.31	3.16
118	119	2.559668	TGTATGGACTTCGGTCGAACTT	59.440	45.455	0.00	0.00	45.31	2.66
119	120	2.165167	TGTATGGACTTCGGTCGAACT	58.835	47.619	0.00	0.00	45.31	3.01
120	121	2.642139	TGTATGGACTTCGGTCGAAC	57.358	50.000	1.33	0.00	45.31	3.95
121	122	3.021695	AGATGTATGGACTTCGGTCGAA	58.978	45.455	5.67	5.67	45.31	3.71
122	123	2.651455	AGATGTATGGACTTCGGTCGA	58.349	47.619	0.00	0.00	45.31	4.20
123	124	4.563337	TTAGATGTATGGACTTCGGTCG	57.437	45.455	0.00	0.00	45.31	4.79
124	125	5.844004	ACATTAGATGTATGGACTTCGGTC	58.156	41.667	0.00	0.00	42.78	4.79
125	126	5.871396	ACATTAGATGTATGGACTTCGGT	57.129	39.130	0.00	0.00	42.78	4.69
126	127	7.215719	TCTACATTAGATGTATGGACTTCGG	57.784	40.000	1.62	0.00	44.11	4.30
127	128	7.309177	CCTCTACATTAGATGTATGGACTTCG	58.691	42.308	11.53	0.00	44.11	3.79
128	129	7.039363	AGCCTCTACATTAGATGTATGGACTTC	60.039	40.741	17.07	6.24	44.11	3.01
129	130	6.784969	AGCCTCTACATTAGATGTATGGACTT	59.215	38.462	17.07	5.97	44.11	3.01
130	131	6.318913	AGCCTCTACATTAGATGTATGGACT	58.681	40.000	17.07	12.71	44.11	3.85
131	132	6.597832	AGCCTCTACATTAGATGTATGGAC	57.402	41.667	17.07	11.47	44.11	4.02
132	133	6.211584	GGAAGCCTCTACATTAGATGTATGGA	59.788	42.308	17.07	6.97	44.11	3.41
133	134	6.402222	GGAAGCCTCTACATTAGATGTATGG	58.598	44.000	12.17	12.17	44.11	2.74
134	135	6.096036	CGGAAGCCTCTACATTAGATGTATG	58.904	44.000	1.62	0.00	44.11	2.39
135	136	5.775701	ACGGAAGCCTCTACATTAGATGTAT	59.224	40.000	1.62	0.00	44.11	2.29
136	137	5.138276	ACGGAAGCCTCTACATTAGATGTA	58.862	41.667	1.31	1.31	44.38	2.29
137	138	3.961408	ACGGAAGCCTCTACATTAGATGT	59.039	43.478	0.00	0.00	46.92	3.06
138	139	4.592485	ACGGAAGCCTCTACATTAGATG	57.408	45.455	0.00	0.00	33.66	2.90
139	140	6.010850	TGATACGGAAGCCTCTACATTAGAT	58.989	40.000	0.00	0.00	33.66	1.98
140	141	5.382616	TGATACGGAAGCCTCTACATTAGA	58.617	41.667	0.00	0.00	0.00	2.10
141	142	5.241949	ACTGATACGGAAGCCTCTACATTAG	59.758	44.000	0.00	0.00	0.00	1.73
142	143	5.138276	ACTGATACGGAAGCCTCTACATTA	58.862	41.667	0.00	0.00	0.00	1.90
143	144	3.961408	ACTGATACGGAAGCCTCTACATT	59.039	43.478	0.00	0.00	0.00	2.71
144	145	3.567397	ACTGATACGGAAGCCTCTACAT	58.433	45.455	0.00	0.00	0.00	2.29
145	146	2.950309	GACTGATACGGAAGCCTCTACA	59.050	50.000	0.00	0.00	0.00	2.74
146	147	2.031857	CGACTGATACGGAAGCCTCTAC	60.032	54.545	0.00	0.00	0.00	2.59
147	148	2.219458	CGACTGATACGGAAGCCTCTA	58.781	52.381	0.00	0.00	0.00	2.43
148	149	1.025812	CGACTGATACGGAAGCCTCT	58.974	55.000	0.00	0.00	0.00	3.69
149	150	0.595310	GCGACTGATACGGAAGCCTC	60.595	60.000	0.00	0.00	0.00	4.70
150	151	1.320344	TGCGACTGATACGGAAGCCT	61.320	55.000	0.00	0.00	0.00	4.58
151	152	0.872021	CTGCGACTGATACGGAAGCC	60.872	60.000	0.00	0.00	0.00	4.35
152	153	0.179134	ACTGCGACTGATACGGAAGC	60.179	55.000	0.00	0.00	0.00	3.86
153	154	2.287069	CCTACTGCGACTGATACGGAAG	60.287	54.545	0.00	0.00	0.00	3.46
154	155	1.674441	CCTACTGCGACTGATACGGAA	59.326	52.381	0.00	0.00	0.00	4.30
155	156	1.134310	TCCTACTGCGACTGATACGGA	60.134	52.381	0.00	0.00	0.00	4.69
156	157	1.306148	TCCTACTGCGACTGATACGG	58.694	55.000	0.00	0.00	0.00	4.02
157	158	3.106672	GTTTCCTACTGCGACTGATACG	58.893	50.000	0.00	0.00	0.00	3.06
158	159	4.096682	AGAGTTTCCTACTGCGACTGATAC	59.903	45.833	0.00	0.00	37.17	2.24
159	160	4.096532	CAGAGTTTCCTACTGCGACTGATA	59.903	45.833	0.00	0.00	37.17	2.15
160	161	3.093057	AGAGTTTCCTACTGCGACTGAT	58.907	45.455	0.00	0.00	37.17	2.90
161	162	2.229062	CAGAGTTTCCTACTGCGACTGA	59.771	50.000	0.00	0.00	37.17	3.41
162	163	2.600731	CAGAGTTTCCTACTGCGACTG	58.399	52.381	0.00	0.00	37.17	3.51
163	164	1.546476	CCAGAGTTTCCTACTGCGACT	59.454	52.381	0.00	0.00	37.17	4.18
164	165	1.544691	TCCAGAGTTTCCTACTGCGAC	59.455	52.381	0.00	0.00	37.17	5.19
165	166	1.919240	TCCAGAGTTTCCTACTGCGA	58.081	50.000	0.00	0.00	37.17	5.10
166	167	2.743636	TTCCAGAGTTTCCTACTGCG	57.256	50.000	0.00	0.00	37.17	5.18
167	168	5.735766	AGTAATTCCAGAGTTTCCTACTGC	58.264	41.667	0.00	0.00	37.17	4.40
168	169	6.819146	GGAAGTAATTCCAGAGTTTCCTACTG	59.181	42.308	16.91	0.00	40.79	2.74
169	170	6.500751	TGGAAGTAATTCCAGAGTTTCCTACT	59.499	38.462	20.32	0.00	45.55	2.57
170	171	6.708285	TGGAAGTAATTCCAGAGTTTCCTAC	58.292	40.000	20.32	0.00	45.55	3.18
171	172	6.945636	TGGAAGTAATTCCAGAGTTTCCTA	57.054	37.500	20.32	0.00	45.55	2.94
172	173	5.843019	TGGAAGTAATTCCAGAGTTTCCT	57.157	39.130	20.32	0.00	45.55	3.36
182	183	5.185249	GGAAAGGAACCTTGGAAGTAATTCC	59.815	44.000	15.06	15.06	41.48	3.01
183	184	6.010850	AGGAAAGGAACCTTGGAAGTAATTC	58.989	40.000	6.88	0.00	36.26	2.17
184	185	5.965486	AGGAAAGGAACCTTGGAAGTAATT	58.035	37.500	6.88	0.00	36.26	1.40
185	186	5.600669	AGGAAAGGAACCTTGGAAGTAAT	57.399	39.130	6.88	0.00	36.26	1.89
186	187	5.397553	AAGGAAAGGAACCTTGGAAGTAA	57.602	39.130	6.88	0.00	44.73	2.24
187	188	5.103855	TCAAAGGAAAGGAACCTTGGAAGTA	60.104	40.000	6.88	0.00	45.55	2.24
188	189	3.960755	CAAAGGAAAGGAACCTTGGAAGT	59.039	43.478	6.88	0.00	45.55	3.01
189	190	4.038042	GTCAAAGGAAAGGAACCTTGGAAG	59.962	45.833	6.88	0.00	45.47	3.46
190	191	3.958147	GTCAAAGGAAAGGAACCTTGGAA	59.042	43.478	6.88	0.00	45.47	3.53
191	192	3.562182	GTCAAAGGAAAGGAACCTTGGA	58.438	45.455	6.88	0.00	45.55	3.53
192	193	2.628178	GGTCAAAGGAAAGGAACCTTGG	59.372	50.000	6.88	0.00	45.55	3.61
193	194	3.319122	CAGGTCAAAGGAAAGGAACCTTG	59.681	47.826	6.88	0.00	45.55	3.61
195	196	2.783510	TCAGGTCAAAGGAAAGGAACCT	59.216	45.455	0.00	0.00	39.69	3.50
196	197	3.223674	TCAGGTCAAAGGAAAGGAACC	57.776	47.619	0.00	0.00	0.00	3.62
197	198	4.216472	GTCATCAGGTCAAAGGAAAGGAAC	59.784	45.833	0.00	0.00	0.00	3.62
198	199	4.398319	GTCATCAGGTCAAAGGAAAGGAA	58.602	43.478	0.00	0.00	0.00	3.36
199	200	3.557054	CGTCATCAGGTCAAAGGAAAGGA	60.557	47.826	0.00	0.00	0.00	3.36
200	201	2.744202	CGTCATCAGGTCAAAGGAAAGG	59.256	50.000	0.00	0.00	0.00	3.11
201	202	3.664107	TCGTCATCAGGTCAAAGGAAAG	58.336	45.455	0.00	0.00	0.00	2.62
202	203	3.762407	TCGTCATCAGGTCAAAGGAAA	57.238	42.857	0.00	0.00	0.00	3.13
203	204	3.323691	TCTTCGTCATCAGGTCAAAGGAA	59.676	43.478	0.00	0.00	0.00	3.36
204	205	2.897326	TCTTCGTCATCAGGTCAAAGGA	59.103	45.455	0.00	0.00	0.00	3.36
205	206	3.319137	TCTTCGTCATCAGGTCAAAGG	57.681	47.619	0.00	0.00	0.00	3.11
206	207	5.655488	AGTATCTTCGTCATCAGGTCAAAG	58.345	41.667	0.00	0.00	0.00	2.77
207	208	5.661056	AGTATCTTCGTCATCAGGTCAAA	57.339	39.130	0.00	0.00	0.00	2.69
208	209	5.047306	ACAAGTATCTTCGTCATCAGGTCAA	60.047	40.000	0.00	0.00	0.00	3.18
209	210	4.462834	ACAAGTATCTTCGTCATCAGGTCA	59.537	41.667	0.00	0.00	0.00	4.02
210	211	5.000012	ACAAGTATCTTCGTCATCAGGTC	58.000	43.478	0.00	0.00	0.00	3.85
211	212	5.407407	AACAAGTATCTTCGTCATCAGGT	57.593	39.130	0.00	0.00	0.00	4.00
212	213	7.429633	AGATAACAAGTATCTTCGTCATCAGG	58.570	38.462	0.00	0.00	45.71	3.86
224	225	5.171695	GCAACTCGACGAGATAACAAGTATC	59.828	44.000	30.56	3.31	39.24	2.24
225	226	5.035443	GCAACTCGACGAGATAACAAGTAT	58.965	41.667	30.56	1.51	33.32	2.12
226	227	4.083164	TGCAACTCGACGAGATAACAAGTA	60.083	41.667	30.56	4.12	33.32	2.24
227	228	3.243336	GCAACTCGACGAGATAACAAGT	58.757	45.455	30.56	4.00	33.32	3.16
228	229	3.059570	GTGCAACTCGACGAGATAACAAG	59.940	47.826	30.56	8.32	33.32	3.16
229	230	2.984471	GTGCAACTCGACGAGATAACAA	59.016	45.455	30.56	8.50	33.32	2.83
230	231	2.592194	GTGCAACTCGACGAGATAACA	58.408	47.619	30.56	17.04	33.32	2.41
244	245	0.179018	AAGTGGGAGGACAGTGCAAC	60.179	55.000	0.00	0.00	0.00	4.17
245	246	1.071699	GTAAGTGGGAGGACAGTGCAA	59.928	52.381	0.00	0.00	0.00	4.08
246	247	0.685097	GTAAGTGGGAGGACAGTGCA	59.315	55.000	0.00	0.00	0.00	4.57
247	248	0.036294	GGTAAGTGGGAGGACAGTGC	60.036	60.000	0.00	0.00	0.00	4.40
248	249	0.613777	GGGTAAGTGGGAGGACAGTG	59.386	60.000	0.00	0.00	0.00	3.66
249	250	0.492276	AGGGTAAGTGGGAGGACAGT	59.508	55.000	0.00	0.00	0.00	3.55
250	251	1.657804	AAGGGTAAGTGGGAGGACAG	58.342	55.000	0.00	0.00	0.00	3.51
251	252	2.107552	CAAAAGGGTAAGTGGGAGGACA	59.892	50.000	0.00	0.00	0.00	4.02
252	253	2.791655	CAAAAGGGTAAGTGGGAGGAC	58.208	52.381	0.00	0.00	0.00	3.85
253	254	1.074889	GCAAAAGGGTAAGTGGGAGGA	59.925	52.381	0.00	0.00	0.00	3.71
254	255	1.203001	TGCAAAAGGGTAAGTGGGAGG	60.203	52.381	0.00	0.00	0.00	4.30
255	256	2.286365	TGCAAAAGGGTAAGTGGGAG	57.714	50.000	0.00	0.00	0.00	4.30
256	257	2.175931	TCTTGCAAAAGGGTAAGTGGGA	59.824	45.455	0.00	0.00	33.01	4.37
257	258	2.593026	TCTTGCAAAAGGGTAAGTGGG	58.407	47.619	0.00	0.00	33.01	4.61
258	259	3.636764	AGTTCTTGCAAAAGGGTAAGTGG	59.363	43.478	0.00	0.00	33.01	4.00
259	260	4.918810	AGTTCTTGCAAAAGGGTAAGTG	57.081	40.909	0.00	0.00	33.01	3.16
260	261	7.004691	AGAATAGTTCTTGCAAAAGGGTAAGT	58.995	34.615	0.00	0.00	36.36	2.24
261	262	7.454260	AGAATAGTTCTTGCAAAAGGGTAAG	57.546	36.000	0.00	0.00	36.36	2.34
262	263	9.528489	AATAGAATAGTTCTTGCAAAAGGGTAA	57.472	29.630	0.00	0.00	41.14	2.85
263	264	9.528489	AAATAGAATAGTTCTTGCAAAAGGGTA	57.472	29.630	0.00	0.00	41.14	3.69
264	265	8.422577	AAATAGAATAGTTCTTGCAAAAGGGT	57.577	30.769	0.00	0.00	41.14	4.34
282	283	9.400638	CACAAAACGGTATGCTTTTAAATAGAA	57.599	29.630	0.00	0.00	0.00	2.10
283	284	8.024285	CCACAAAACGGTATGCTTTTAAATAGA	58.976	33.333	0.00	0.00	0.00	1.98
284	285	7.201401	GCCACAAAACGGTATGCTTTTAAATAG	60.201	37.037	0.00	0.00	0.00	1.73
285	286	6.586844	GCCACAAAACGGTATGCTTTTAAATA	59.413	34.615	0.00	0.00	0.00	1.40
286	287	5.407084	GCCACAAAACGGTATGCTTTTAAAT	59.593	36.000	0.00	0.00	0.00	1.40
287	288	4.745620	GCCACAAAACGGTATGCTTTTAAA	59.254	37.500	0.00	0.00	0.00	1.52
288	289	4.202121	TGCCACAAAACGGTATGCTTTTAA	60.202	37.500	0.00	0.00	0.00	1.52
289	290	3.318275	TGCCACAAAACGGTATGCTTTTA	59.682	39.130	0.00	0.00	0.00	1.52
290	291	2.101582	TGCCACAAAACGGTATGCTTTT	59.898	40.909	0.00	0.00	0.00	2.27
291	292	1.683917	TGCCACAAAACGGTATGCTTT	59.316	42.857	0.00	0.00	0.00	3.51
292	293	1.323412	TGCCACAAAACGGTATGCTT	58.677	45.000	0.00	0.00	0.00	3.91
293	294	1.323412	TTGCCACAAAACGGTATGCT	58.677	45.000	0.00	0.00	0.00	3.79
294	295	2.141535	TTTGCCACAAAACGGTATGC	57.858	45.000	0.00	0.00	0.00	3.14
295	296	4.151512	GGATTTTTGCCACAAAACGGTATG	59.848	41.667	5.04	0.00	0.00	2.39
296	297	4.039852	AGGATTTTTGCCACAAAACGGTAT	59.960	37.500	5.04	0.00	0.00	2.73
297	298	3.385111	AGGATTTTTGCCACAAAACGGTA	59.615	39.130	5.04	0.00	0.00	4.02
298	299	2.169561	AGGATTTTTGCCACAAAACGGT	59.830	40.909	5.04	0.00	0.00	4.83
299	300	2.832563	AGGATTTTTGCCACAAAACGG	58.167	42.857	5.04	0.00	0.00	4.44
300	301	5.047188	ACTAAGGATTTTTGCCACAAAACG	58.953	37.500	5.04	0.00	0.00	3.60
301	302	6.280643	AGACTAAGGATTTTTGCCACAAAAC	58.719	36.000	5.04	0.00	0.00	2.43
302	303	6.478512	AGACTAAGGATTTTTGCCACAAAA	57.521	33.333	1.50	1.50	0.00	2.44
303	304	5.278266	CGAGACTAAGGATTTTTGCCACAAA	60.278	40.000	0.00	0.00	0.00	2.83
304	305	4.215399	CGAGACTAAGGATTTTTGCCACAA	59.785	41.667	0.00	0.00	0.00	3.33
305	306	3.751175	CGAGACTAAGGATTTTTGCCACA	59.249	43.478	0.00	0.00	0.00	4.17
306	307	3.127030	CCGAGACTAAGGATTTTTGCCAC	59.873	47.826	0.00	0.00	0.00	5.01
307	308	3.244770	ACCGAGACTAAGGATTTTTGCCA	60.245	43.478	3.67	0.00	0.00	4.92
308	309	3.344515	ACCGAGACTAAGGATTTTTGCC	58.655	45.455	3.67	0.00	0.00	4.52
309	310	6.985059	ACTATACCGAGACTAAGGATTTTTGC	59.015	38.462	3.67	0.00	0.00	3.68
310	311	7.438459	CCACTATACCGAGACTAAGGATTTTTG	59.562	40.741	3.67	0.00	0.00	2.44
311	312	7.125356	ACCACTATACCGAGACTAAGGATTTTT	59.875	37.037	3.67	0.00	0.00	1.94
312	313	6.610425	ACCACTATACCGAGACTAAGGATTTT	59.390	38.462	3.67	0.00	0.00	1.82
313	314	6.040616	CACCACTATACCGAGACTAAGGATTT	59.959	42.308	3.67	0.00	0.00	2.17
314	315	5.535406	CACCACTATACCGAGACTAAGGATT	59.465	44.000	3.67	0.00	0.00	3.01
315	316	5.071370	CACCACTATACCGAGACTAAGGAT	58.929	45.833	3.67	0.00	0.00	3.24
316	317	4.458397	CACCACTATACCGAGACTAAGGA	58.542	47.826	3.67	0.00	0.00	3.36
317	318	3.568853	CCACCACTATACCGAGACTAAGG	59.431	52.174	0.00	0.00	0.00	2.69
318	319	3.568853	CCCACCACTATACCGAGACTAAG	59.431	52.174	0.00	0.00	0.00	2.18
319	320	3.559069	CCCACCACTATACCGAGACTAA	58.441	50.000	0.00	0.00	0.00	2.24
320	321	2.158564	CCCCACCACTATACCGAGACTA	60.159	54.545	0.00	0.00	0.00	2.59
321	322	1.411216	CCCCACCACTATACCGAGACT	60.411	57.143	0.00	0.00	0.00	3.24
322	323	1.038280	CCCCACCACTATACCGAGAC	58.962	60.000	0.00	0.00	0.00	3.36
323	324	0.105862	CCCCCACCACTATACCGAGA	60.106	60.000	0.00	0.00	0.00	4.04
324	325	0.105862	TCCCCCACCACTATACCGAG	60.106	60.000	0.00	0.00	0.00	4.63
325	326	0.339162	TTCCCCCACCACTATACCGA	59.661	55.000	0.00	0.00	0.00	4.69
326	327	1.430992	ATTCCCCCACCACTATACCG	58.569	55.000	0.00	0.00	0.00	4.02
327	328	2.641321	GGTATTCCCCCACCACTATACC	59.359	54.545	0.00	0.00	34.77	2.73
348	349	7.176690	ACTTTGTAAGTTATCCCAAGTCATTGG	59.823	37.037	0.00	0.00	46.80	3.16
349	350	8.110860	ACTTTGTAAGTTATCCCAAGTCATTG	57.889	34.615	0.00	0.00	39.04	2.82
350	351	9.449719	CTACTTTGTAAGTTATCCCAAGTCATT	57.550	33.333	0.00	0.00	42.81	2.57
351	352	7.553044	GCTACTTTGTAAGTTATCCCAAGTCAT	59.447	37.037	0.00	0.00	42.81	3.06
352	353	6.877322	GCTACTTTGTAAGTTATCCCAAGTCA	59.123	38.462	0.00	0.00	42.81	3.41
353	354	6.877322	TGCTACTTTGTAAGTTATCCCAAGTC	59.123	38.462	0.00	0.00	42.81	3.01
354	355	6.653740	GTGCTACTTTGTAAGTTATCCCAAGT	59.346	38.462	0.00	0.00	42.81	3.16
355	356	6.879458	AGTGCTACTTTGTAAGTTATCCCAAG	59.121	38.462	0.00	0.00	42.81	3.61
356	357	6.775708	AGTGCTACTTTGTAAGTTATCCCAA	58.224	36.000	0.00	0.00	42.81	4.12
357	358	6.368779	AGTGCTACTTTGTAAGTTATCCCA	57.631	37.500	0.00	0.00	42.81	4.37
358	359	6.653740	ACAAGTGCTACTTTGTAAGTTATCCC	59.346	38.462	0.00	0.00	42.81	3.85
359	360	7.603024	AGACAAGTGCTACTTTGTAAGTTATCC	59.397	37.037	0.00	0.00	42.81	2.59
360	361	8.436200	CAGACAAGTGCTACTTTGTAAGTTATC	58.564	37.037	0.00	0.00	42.81	1.75
361	362	8.148351	TCAGACAAGTGCTACTTTGTAAGTTAT	58.852	33.333	0.00	0.00	42.81	1.89
362	363	7.494211	TCAGACAAGTGCTACTTTGTAAGTTA	58.506	34.615	0.00	0.00	42.81	2.24
363	364	6.346096	TCAGACAAGTGCTACTTTGTAAGTT	58.654	36.000	0.00	0.00	42.81	2.66
364	365	5.914033	TCAGACAAGTGCTACTTTGTAAGT	58.086	37.500	0.00	0.00	45.40	2.24
365	366	7.426929	AATCAGACAAGTGCTACTTTGTAAG	57.573	36.000	0.00	0.00	36.03	2.34
366	367	7.255104	CCAAATCAGACAAGTGCTACTTTGTAA	60.255	37.037	0.00	0.00	36.03	2.41
367	368	6.204688	CCAAATCAGACAAGTGCTACTTTGTA	59.795	38.462	0.00	0.00	36.03	2.41
368	369	5.009010	CCAAATCAGACAAGTGCTACTTTGT	59.991	40.000	0.00	0.00	36.03	2.83
369	370	5.239306	TCCAAATCAGACAAGTGCTACTTTG	59.761	40.000	0.00	0.00	36.03	2.77
370	371	5.376625	TCCAAATCAGACAAGTGCTACTTT	58.623	37.500	0.00	0.00	36.03	2.66
371	372	4.973168	TCCAAATCAGACAAGTGCTACTT	58.027	39.130	0.00	0.00	39.39	2.24
372	373	4.623932	TCCAAATCAGACAAGTGCTACT	57.376	40.909	0.00	0.00	0.00	2.57
373	374	5.886960	ATTCCAAATCAGACAAGTGCTAC	57.113	39.130	0.00	0.00	0.00	3.58
374	375	6.115446	CCTATTCCAAATCAGACAAGTGCTA	58.885	40.000	0.00	0.00	0.00	3.49
375	376	4.946157	CCTATTCCAAATCAGACAAGTGCT	59.054	41.667	0.00	0.00	0.00	4.40
376	377	4.702131	ACCTATTCCAAATCAGACAAGTGC	59.298	41.667	0.00	0.00	0.00	4.40
377	378	6.824305	AACCTATTCCAAATCAGACAAGTG	57.176	37.500	0.00	0.00	0.00	3.16
378	379	6.777580	ACAAACCTATTCCAAATCAGACAAGT	59.222	34.615	0.00	0.00	0.00	3.16
379	380	7.040478	TCACAAACCTATTCCAAATCAGACAAG	60.040	37.037	0.00	0.00	0.00	3.16
380	381	6.775142	TCACAAACCTATTCCAAATCAGACAA	59.225	34.615	0.00	0.00	0.00	3.18
381	382	6.206634	GTCACAAACCTATTCCAAATCAGACA	59.793	38.462	0.00	0.00	0.00	3.41
382	383	6.349363	GGTCACAAACCTATTCCAAATCAGAC	60.349	42.308	0.00	0.00	45.45	3.51
383	384	5.710099	GGTCACAAACCTATTCCAAATCAGA	59.290	40.000	0.00	0.00	45.45	3.27
384	385	5.954335	GGTCACAAACCTATTCCAAATCAG	58.046	41.667	0.00	0.00	45.45	2.90
385	386	5.975693	GGTCACAAACCTATTCCAAATCA	57.024	39.130	0.00	0.00	45.45	2.57
398	399	4.109766	GGCTTGTGTAAAAGGTCACAAAC	58.890	43.478	10.96	7.32	46.26	2.93
399	400	3.131400	GGGCTTGTGTAAAAGGTCACAAA	59.869	43.478	10.96	0.00	46.26	2.83
400	401	2.691011	GGGCTTGTGTAAAAGGTCACAA	59.309	45.455	9.71	9.71	46.26	3.33
401	402	2.303175	GGGCTTGTGTAAAAGGTCACA	58.697	47.619	0.00	0.00	41.81	3.58
402	403	1.611977	GGGGCTTGTGTAAAAGGTCAC	59.388	52.381	0.00	0.00	35.43	3.67
403	404	1.215673	TGGGGCTTGTGTAAAAGGTCA	59.784	47.619	0.00	0.00	0.00	4.02
404	405	1.989706	TGGGGCTTGTGTAAAAGGTC	58.010	50.000	0.00	0.00	0.00	3.85
405	406	2.694616	ATGGGGCTTGTGTAAAAGGT	57.305	45.000	0.00	0.00	0.00	3.50
406	407	4.099419	GGAATATGGGGCTTGTGTAAAAGG	59.901	45.833	0.00	0.00	0.00	3.11
407	408	4.709397	TGGAATATGGGGCTTGTGTAAAAG	59.291	41.667	0.00	0.00	0.00	2.27
408	409	4.678256	TGGAATATGGGGCTTGTGTAAAA	58.322	39.130	0.00	0.00	0.00	1.52
409	410	4.323569	TGGAATATGGGGCTTGTGTAAA	57.676	40.909	0.00	0.00	0.00	2.01
410	411	4.323569	TTGGAATATGGGGCTTGTGTAA	57.676	40.909	0.00	0.00	0.00	2.41
411	412	4.323569	TTTGGAATATGGGGCTTGTGTA	57.676	40.909	0.00	0.00	0.00	2.90
412	413	2.917713	TTGGAATATGGGGCTTGTGT	57.082	45.000	0.00	0.00	0.00	3.72
413	414	3.451902	ACATTTGGAATATGGGGCTTGTG	59.548	43.478	0.00	0.00	0.00	3.33
414	415	3.723325	ACATTTGGAATATGGGGCTTGT	58.277	40.909	0.00	0.00	0.00	3.16
415	416	4.758773	AACATTTGGAATATGGGGCTTG	57.241	40.909	0.00	0.00	0.00	4.01
416	417	5.163311	GCTTAACATTTGGAATATGGGGCTT	60.163	40.000	0.00	0.00	0.00	4.35
417	418	4.344968	GCTTAACATTTGGAATATGGGGCT	59.655	41.667	0.00	0.00	0.00	5.19
418	419	4.100808	TGCTTAACATTTGGAATATGGGGC	59.899	41.667	0.00	0.00	0.00	5.80
419	420	5.221501	CCTGCTTAACATTTGGAATATGGGG	60.222	44.000	0.00	0.00	0.00	4.96
420	421	5.221501	CCCTGCTTAACATTTGGAATATGGG	60.222	44.000	0.00	0.00	0.00	4.00
421	422	5.598005	TCCCTGCTTAACATTTGGAATATGG	59.402	40.000	0.00	0.00	0.00	2.74
422	423	6.713762	TCCCTGCTTAACATTTGGAATATG	57.286	37.500	0.00	0.00	0.00	1.78
423	424	6.239402	GCATCCCTGCTTAACATTTGGAATAT	60.239	38.462	0.00	0.00	45.32	1.28
424	425	5.068987	GCATCCCTGCTTAACATTTGGAATA	59.931	40.000	0.00	0.00	45.32	1.75
425	426	4.141869	GCATCCCTGCTTAACATTTGGAAT	60.142	41.667	0.00	0.00	45.32	3.01
426	427	3.195396	GCATCCCTGCTTAACATTTGGAA	59.805	43.478	0.00	0.00	45.32	3.53
427	428	2.760092	GCATCCCTGCTTAACATTTGGA	59.240	45.455	0.00	0.00	45.32	3.53
428	429	3.169355	GCATCCCTGCTTAACATTTGG	57.831	47.619	0.00	0.00	45.32	3.28
459	460	1.180456	TCCTTCCACACGCGTAAGGA	61.180	55.000	28.76	28.76	44.01	3.36
467	468	0.170561	CGGAGTAGTCCTTCCACACG	59.829	60.000	14.77	0.00	41.34	4.49
468	469	1.201880	GTCGGAGTAGTCCTTCCACAC	59.798	57.143	14.77	0.00	41.34	3.82
469	470	1.202964	TGTCGGAGTAGTCCTTCCACA	60.203	52.381	14.77	8.79	41.34	4.17
470	471	1.542492	TGTCGGAGTAGTCCTTCCAC	58.458	55.000	14.77	6.49	41.34	4.02
485	486	1.455786	GTCATCGTCCTGTTGTTGTCG	59.544	52.381	0.00	0.00	0.00	4.35
499	500	4.785950	ACGACACATCCGTCATCG	57.214	55.556	0.00	0.00	34.97	3.84
507	508	3.188786	GCTGGCCGACGACACATC	61.189	66.667	0.00	0.00	0.00	3.06
509	510	3.923864	AAGCTGGCCGACGACACA	61.924	61.111	0.00	0.00	0.00	3.72
516	517	1.377202	GTCATTCCAAGCTGGCCGA	60.377	57.895	0.00	0.00	37.47	5.54
526	527	2.234414	GGTAACCTGGTACGTCATTCCA	59.766	50.000	0.00	0.00	0.00	3.53
529	530	1.895131	ACGGTAACCTGGTACGTCATT	59.105	47.619	15.43	0.00	31.39	2.57
531	532	3.034924	ACGGTAACCTGGTACGTCA	57.965	52.632	15.43	0.00	31.39	4.35
573	574	9.777575	CGGTATTTCATCCGTTTAAGTATTTTT	57.222	29.630	0.00	0.00	41.58	1.94
670	679	3.192422	TGTCTGCAATATTTCAAACCGGG	59.808	43.478	6.32	0.00	0.00	5.73
674	683	4.794169	ACCGTGTCTGCAATATTTCAAAC	58.206	39.130	0.00	0.00	0.00	2.93
685	694	0.324614	ATCATCCAACCGTGTCTGCA	59.675	50.000	0.00	0.00	0.00	4.41
688	698	3.198635	AGAATGATCATCCAACCGTGTCT	59.801	43.478	9.06	1.78	0.00	3.41
691	701	3.273434	ACAGAATGATCATCCAACCGTG	58.727	45.455	9.06	2.10	39.69	4.94
693	703	5.178252	GTGATACAGAATGATCATCCAACCG	59.822	44.000	9.06	0.00	39.69	4.44
704	714	5.540337	GGATAGGGACAGTGATACAGAATGA	59.460	44.000	0.00	0.00	39.69	2.57
707	717	4.878968	TGGATAGGGACAGTGATACAGAA	58.121	43.478	0.00	0.00	0.00	3.02
708	718	4.536295	TGGATAGGGACAGTGATACAGA	57.464	45.455	0.00	0.00	0.00	3.41
709	719	4.835056	TCATGGATAGGGACAGTGATACAG	59.165	45.833	0.00	0.00	0.00	2.74
711	721	4.322349	GCTCATGGATAGGGACAGTGATAC	60.322	50.000	0.00	0.00	0.00	2.24
712	722	3.834813	GCTCATGGATAGGGACAGTGATA	59.165	47.826	0.00	0.00	0.00	2.15
713	723	2.636893	GCTCATGGATAGGGACAGTGAT	59.363	50.000	0.00	0.00	0.00	3.06
714	724	2.042464	GCTCATGGATAGGGACAGTGA	58.958	52.381	0.00	0.00	0.00	3.41
725	735	1.134310	TCTGCGAACATGCTCATGGAT	60.134	47.619	13.69	3.00	42.91	3.41
752	762	4.778415	CGACGCTCCGGGACACTG	62.778	72.222	0.00	0.00	0.00	3.66
768	778	6.155827	TGAAATTTTGTTTAGGCCATCTTCG	58.844	36.000	5.01	0.00	0.00	3.79
776	786	4.803613	CCCGCTATGAAATTTTGTTTAGGC	59.196	41.667	0.00	0.00	0.00	3.93
790	800	3.536917	CGCTCCACCCCGCTATGA	61.537	66.667	0.00	0.00	0.00	2.15
821	831	2.235016	TGGGTTTCACAATGGCAGTAC	58.765	47.619	0.00	0.00	0.00	2.73
829	839	3.386402	ACAACGGATTTGGGTTTCACAAT	59.614	39.130	0.00	0.00	39.84	2.71
877	889	1.022735	GGAAGATCTACGGCTGTCGA	58.977	55.000	9.35	0.50	42.43	4.20
913	925	1.911766	GTCAGGGGAGTGGACGGAA	60.912	63.158	0.00	0.00	0.00	4.30
1047	1060	1.519719	CGGAAGCTTGGGGAGAGAG	59.480	63.158	2.10	0.00	0.00	3.20
1048	1061	1.990060	CCGGAAGCTTGGGGAGAGA	60.990	63.158	2.10	0.00	0.00	3.10
1049	1062	2.586792	CCGGAAGCTTGGGGAGAG	59.413	66.667	2.10	0.00	0.00	3.20
1050	1063	3.717294	GCCGGAAGCTTGGGGAGA	61.717	66.667	5.05	0.00	38.99	3.71
1081	1100	1.677552	GTCGCCAAGAAGGGAAGGA	59.322	57.895	0.00	0.00	38.09	3.36
1263	1283	3.262420	GTTGGTGATATCGCAGAGTGTT	58.738	45.455	17.68	0.00	43.63	3.32
1266	1286	2.111384	AGGTTGGTGATATCGCAGAGT	58.889	47.619	17.68	0.00	43.63	3.24
1275	1295	1.904771	CCGCCTCAGGTTGGTGATA	59.095	57.895	0.00	0.00	37.26	2.15
1707	1743	6.183360	GGGGATAACTTACTGCTAACATCTGA	60.183	42.308	0.00	0.00	0.00	3.27
1733	1769	6.491403	ACAATGGAGTTTCTTGCAGATAGTTT	59.509	34.615	0.00	0.00	0.00	2.66
1757	1793	2.009051	CCACGGTTATAAAACGGGGAC	58.991	52.381	21.47	0.00	40.74	4.46
1769	1805	1.614903	ACACGATCAAGTCCACGGTTA	59.385	47.619	0.00	0.00	0.00	2.85
1786	1822	3.786635	AGATTAGCCTCGTGATGAACAC	58.213	45.455	0.00	0.00	45.11	3.32
2065	2102	0.925466	GCGGCATCATGAACATTTGC	59.075	50.000	9.31	9.31	0.00	3.68
2083	2120	3.499048	CACATGAACAGAAGCATCAAGC	58.501	45.455	0.00	0.00	46.19	4.01
2367	2407	5.349061	ACAGATGTGAAGAGATGTATGCA	57.651	39.130	0.00	0.00	0.00	3.96
2386	2426	2.048444	ATCAGTTAGCATGGCCACAG	57.952	50.000	8.16	4.78	0.00	3.66
2516	2556	4.737054	ACATTTGATGATTTTGACGAGGC	58.263	39.130	0.00	0.00	0.00	4.70
2517	2557	5.509272	CGAACATTTGATGATTTTGACGAGG	59.491	40.000	0.00	0.00	0.00	4.63
2669	2709	2.043664	TCTCCTTCCTGTCATCTCCACT	59.956	50.000	0.00	0.00	0.00	4.00
2713	2753	1.973281	CCTGCGTGGGAATTGCACT	60.973	57.895	0.00	0.00	34.42	4.40
2889	2929	4.280677	CAGAAGGCCACCAAAGAATAAACA	59.719	41.667	5.01	0.00	0.00	2.83
2918	2958	4.569180	ACACACCGCTGGCTGCTT	62.569	61.111	14.58	0.00	40.11	3.91
2930	2976	0.316937	CGCACCACAATCACACACAC	60.317	55.000	0.00	0.00	0.00	3.82
2931	2977	0.462759	TCGCACCACAATCACACACA	60.463	50.000	0.00	0.00	0.00	3.72
2932	2978	0.660488	TTCGCACCACAATCACACAC	59.340	50.000	0.00	0.00	0.00	3.82
2933	2979	1.333308	CTTTCGCACCACAATCACACA	59.667	47.619	0.00	0.00	0.00	3.72
2934	2980	1.601903	TCTTTCGCACCACAATCACAC	59.398	47.619	0.00	0.00	0.00	3.82
2936	2982	3.236816	CATTCTTTCGCACCACAATCAC	58.763	45.455	0.00	0.00	0.00	3.06
2937	2983	2.228582	CCATTCTTTCGCACCACAATCA	59.771	45.455	0.00	0.00	0.00	2.57
2944	3004	4.868195	GTGCCATTCTTTCGCACC	57.132	55.556	0.00	0.00	45.64	5.01
2948	3008	1.808945	AGCTTCTGTGCCATTCTTTCG	59.191	47.619	0.00	0.00	0.00	3.46
2955	3015	4.972875	GGCTAGCTTCTGTGCCAT	57.027	55.556	15.72	0.00	44.34	4.40
2957	3017	2.149578	CATATGGCTAGCTTCTGTGCC	58.850	52.381	15.72	0.00	45.10	5.01
2958	3018	2.149578	CCATATGGCTAGCTTCTGTGC	58.850	52.381	15.72	0.00	0.00	4.57
2959	3019	3.136763	CACCATATGGCTAGCTTCTGTG	58.863	50.000	22.18	10.78	39.32	3.66
2960	3020	2.774234	ACACCATATGGCTAGCTTCTGT	59.226	45.455	22.18	12.58	39.32	3.41
2961	3021	3.482156	ACACCATATGGCTAGCTTCTG	57.518	47.619	22.18	11.93	39.32	3.02
2962	3022	3.455910	TCAACACCATATGGCTAGCTTCT	59.544	43.478	22.18	2.07	39.32	2.85
2963	3023	3.808728	TCAACACCATATGGCTAGCTTC	58.191	45.455	22.18	0.00	39.32	3.86
2964	3024	3.434167	CCTCAACACCATATGGCTAGCTT	60.434	47.826	22.18	5.30	39.32	3.74
2965	3025	2.105477	CCTCAACACCATATGGCTAGCT	59.895	50.000	22.18	0.00	39.32	3.32
2966	3026	2.158755	ACCTCAACACCATATGGCTAGC	60.159	50.000	22.18	6.04	39.32	3.42
2967	3027	3.845781	ACCTCAACACCATATGGCTAG	57.154	47.619	22.18	14.02	39.32	3.42
2968	3028	3.521531	TGAACCTCAACACCATATGGCTA	59.478	43.478	22.18	2.04	39.32	3.93
2969	3029	2.308570	TGAACCTCAACACCATATGGCT	59.691	45.455	22.18	6.34	39.32	4.75
2970	3030	2.722094	TGAACCTCAACACCATATGGC	58.278	47.619	22.18	1.76	39.32	4.40
3001	3061	7.884877	AGAGTGATGGACAAATTACTTGAATCA	59.115	33.333	0.00	0.00	38.50	2.57
3009	3069	5.412594	TGAAGCAGAGTGATGGACAAATTAC	59.587	40.000	0.00	0.00	0.00	1.89
3029	3089	6.018098	GTCATCATGTCTCTTTGCCTATGAAG	60.018	42.308	0.00	0.00	0.00	3.02
3030	3090	5.819379	GTCATCATGTCTCTTTGCCTATGAA	59.181	40.000	0.00	0.00	0.00	2.57
3031	3091	5.104817	TGTCATCATGTCTCTTTGCCTATGA	60.105	40.000	0.00	0.00	0.00	2.15
3032	3092	5.121105	TGTCATCATGTCTCTTTGCCTATG	58.879	41.667	0.00	0.00	0.00	2.23
3035	3100	3.008813	ACTGTCATCATGTCTCTTTGCCT	59.991	43.478	0.00	0.00	0.00	4.75
3053	3118	9.167311	GTATTCTAGATGAATTTTGGTGACTGT	57.833	33.333	0.00	0.00	42.28	3.55
3054	3119	9.166173	TGTATTCTAGATGAATTTTGGTGACTG	57.834	33.333	0.00	0.00	42.28	3.51
3057	3122	9.342308	GGATGTATTCTAGATGAATTTTGGTGA	57.658	33.333	0.00	0.00	42.28	4.02
3058	3123	9.123902	TGGATGTATTCTAGATGAATTTTGGTG	57.876	33.333	0.00	0.00	42.28	4.17
3059	3124	9.125026	GTGGATGTATTCTAGATGAATTTTGGT	57.875	33.333	0.00	0.00	42.28	3.67
3060	3125	9.123902	TGTGGATGTATTCTAGATGAATTTTGG	57.876	33.333	0.00	0.00	42.28	3.28
3121	4300	4.284490	ACAGAATCTTCCAAGCTGTACTCA	59.716	41.667	0.00	0.00	37.98	3.41
3148	4337	8.668353	GTGCAAAAGATTCATGTCTCTGTTATA	58.332	33.333	0.00	0.00	0.00	0.98
3149	4338	7.175467	TGTGCAAAAGATTCATGTCTCTGTTAT	59.825	33.333	0.00	0.00	0.00	1.89
3150	4339	6.486320	TGTGCAAAAGATTCATGTCTCTGTTA	59.514	34.615	0.00	0.00	0.00	2.41
3153	4342	5.366829	TGTGCAAAAGATTCATGTCTCTG	57.633	39.130	0.00	0.00	0.00	3.35
3154	4343	7.876936	ATATGTGCAAAAGATTCATGTCTCT	57.123	32.000	0.00	0.00	0.00	3.10
3155	4344	7.646922	GGAATATGTGCAAAAGATTCATGTCTC	59.353	37.037	15.85	0.00	0.00	3.36
3156	4345	7.123098	TGGAATATGTGCAAAAGATTCATGTCT	59.877	33.333	15.85	0.00	0.00	3.41
3157	4346	7.259882	TGGAATATGTGCAAAAGATTCATGTC	58.740	34.615	15.85	4.99	0.00	3.06
3158	4347	7.172868	TGGAATATGTGCAAAAGATTCATGT	57.827	32.000	15.85	0.00	0.00	3.21
3159	4348	8.657074	AATGGAATATGTGCAAAAGATTCATG	57.343	30.769	15.85	0.00	0.00	3.07
3160	4349	9.976511	CTAATGGAATATGTGCAAAAGATTCAT	57.023	29.630	15.85	5.04	0.00	2.57
3161	4350	9.187996	TCTAATGGAATATGTGCAAAAGATTCA	57.812	29.630	15.85	6.52	0.00	2.57
3186	4375	6.601741	TTCAAGCACCAAATGAACAAAATC	57.398	33.333	0.00	0.00	0.00	2.17
3216	4405	1.471287	GGGTGACGGATTGGCTTAAAC	59.529	52.381	0.00	0.00	0.00	2.01
3230	4419	4.142381	GCCAATTATGAAGTTCAGGGTGAC	60.142	45.833	11.91	0.00	0.00	3.67
3235	4424	5.678107	GCTTCTGCCAATTATGAAGTTCAGG	60.678	44.000	11.91	7.65	38.41	3.86
3291	4480	9.578576	TGAAAAGAATCAAATATCTCATAGGGG	57.421	33.333	0.00	0.00	0.00	4.79
3307	4496	1.895131	TGCCCAAGCCTGAAAAGAATC	59.105	47.619	0.00	0.00	38.69	2.52
3317	4506	1.934459	ATGCTGAGATGCCCAAGCCT	61.934	55.000	0.00	0.00	38.69	4.58
3319	4508	0.950116	GTATGCTGAGATGCCCAAGC	59.050	55.000	0.00	0.00	40.48	4.01
3343	4532	6.069905	TGACAGGTGGGTATGTAATGTACAAT	60.070	38.462	0.00	0.00	42.76	2.71
3344	4533	5.248705	TGACAGGTGGGTATGTAATGTACAA	59.751	40.000	0.00	0.00	42.76	2.41
3345	4534	4.778427	TGACAGGTGGGTATGTAATGTACA	59.222	41.667	0.00	0.00	43.80	2.90
3346	4535	5.105064	ACTGACAGGTGGGTATGTAATGTAC	60.105	44.000	7.51	0.00	0.00	2.90
3347	4536	5.027460	ACTGACAGGTGGGTATGTAATGTA	58.973	41.667	7.51	0.00	0.00	2.29
3348	4537	3.844211	ACTGACAGGTGGGTATGTAATGT	59.156	43.478	7.51	0.00	0.00	2.71
3349	4538	4.487714	ACTGACAGGTGGGTATGTAATG	57.512	45.455	7.51	0.00	0.00	1.90
3396	4586	7.174946	ACGTGAGTTTCATAATGATTTCCAGTT	59.825	33.333	0.00	0.00	46.40	3.16
3398	4588	7.076842	ACGTGAGTTTCATAATGATTTCCAG	57.923	36.000	0.00	0.00	46.40	3.86
3503	4693	5.874810	CGTGTTTGAGATTTCCTTCTCCATA	59.125	40.000	0.00	0.00	41.24	2.74
3531	4721	3.515602	ATGAGAGTGGTTTGGCTTCTT	57.484	42.857	0.00	0.00	0.00	2.52
3532	4722	3.515602	AATGAGAGTGGTTTGGCTTCT	57.484	42.857	0.00	0.00	0.00	2.85
3533	4723	4.590850	AAAATGAGAGTGGTTTGGCTTC	57.409	40.909	0.00	0.00	0.00	3.86
3534	4724	4.651045	AGAAAAATGAGAGTGGTTTGGCTT	59.349	37.500	0.00	0.00	0.00	4.35
3535	4725	4.218312	AGAAAAATGAGAGTGGTTTGGCT	58.782	39.130	0.00	0.00	0.00	4.75
3536	4726	4.590850	AGAAAAATGAGAGTGGTTTGGC	57.409	40.909	0.00	0.00	0.00	4.52
3537	4727	7.277174	AGTAAGAAAAATGAGAGTGGTTTGG	57.723	36.000	0.00	0.00	0.00	3.28
3564	4754	6.024552	ACAATAAAATCTGACGCCATGTTT	57.975	33.333	0.00	0.00	0.00	2.83
3584	4774	3.181475	TGCGTTTATTTTGGCAAGGACAA	60.181	39.130	0.00	0.00	31.50	3.18
3594	4784	4.355437	TCTGTTGTGGTGCGTTTATTTTG	58.645	39.130	0.00	0.00	0.00	2.44
3595	4785	4.640789	TCTGTTGTGGTGCGTTTATTTT	57.359	36.364	0.00	0.00	0.00	1.82
3600	4790	1.674359	TGATCTGTTGTGGTGCGTTT	58.326	45.000	0.00	0.00	0.00	3.60
3610	4800	6.238402	CCTCATCATAGCACTTTGATCTGTTG	60.238	42.308	1.20	0.00	30.62	3.33
3633	4823	4.583871	GTCTTCATGTGTCCTCAATTCCT	58.416	43.478	0.00	0.00	0.00	3.36
3635	4825	3.372206	CCGTCTTCATGTGTCCTCAATTC	59.628	47.826	0.00	0.00	0.00	2.17
3636	4826	3.007940	TCCGTCTTCATGTGTCCTCAATT	59.992	43.478	0.00	0.00	0.00	2.32
3637	4827	2.567169	TCCGTCTTCATGTGTCCTCAAT	59.433	45.455	0.00	0.00	0.00	2.57
3638	4828	1.967779	TCCGTCTTCATGTGTCCTCAA	59.032	47.619	0.00	0.00	0.00	3.02
3640	4830	1.272490	TGTCCGTCTTCATGTGTCCTC	59.728	52.381	0.00	0.00	0.00	3.71
3641	4831	1.338107	TGTCCGTCTTCATGTGTCCT	58.662	50.000	0.00	0.00	0.00	3.85
3642	4832	2.163818	TTGTCCGTCTTCATGTGTCC	57.836	50.000	0.00	0.00	0.00	4.02
3643	4833	3.589988	AGATTGTCCGTCTTCATGTGTC	58.410	45.455	0.00	0.00	0.00	3.67
3655	4852	6.455646	GCACTGTTATCTTGTTAGATTGTCCG	60.456	42.308	0.00	0.00	41.38	4.79
3656	4853	6.595716	AGCACTGTTATCTTGTTAGATTGTCC	59.404	38.462	0.00	0.00	41.38	4.02
3659	4856	8.261492	AGAAGCACTGTTATCTTGTTAGATTG	57.739	34.615	0.00	0.00	41.38	2.67
3729	4956	7.554835	GGGAACATATTAGTGTTGTTGGATACA	59.445	37.037	0.00	0.00	43.69	2.29
3730	4957	7.012989	GGGGAACATATTAGTGTTGTTGGATAC	59.987	40.741	0.00	0.00	42.08	2.24
3731	4958	7.057894	GGGGAACATATTAGTGTTGTTGGATA	58.942	38.462	0.00	0.00	42.08	2.59
3732	4959	5.891551	GGGGAACATATTAGTGTTGTTGGAT	59.108	40.000	0.00	0.00	42.08	3.41
3733	4960	5.014755	AGGGGAACATATTAGTGTTGTTGGA	59.985	40.000	0.00	0.00	42.08	3.53
3734	4961	5.261216	AGGGGAACATATTAGTGTTGTTGG	58.739	41.667	0.00	0.00	42.08	3.77
3735	4962	7.931578	TTAGGGGAACATATTAGTGTTGTTG	57.068	36.000	0.00	0.00	42.08	3.33
3736	4963	8.943594	TTTTAGGGGAACATATTAGTGTTGTT	57.056	30.769	0.00	0.00	42.08	2.83
3737	4964	8.943594	TTTTTAGGGGAACATATTAGTGTTGT	57.056	30.769	0.00	0.00	42.08	3.32
3760	4987	5.238432	TCGGCATCAGCATATTCGTATTTTT	59.762	36.000	0.00	0.00	44.61	1.94
3761	4988	4.754618	TCGGCATCAGCATATTCGTATTTT	59.245	37.500	0.00	0.00	44.61	1.82
3762	4989	4.152402	GTCGGCATCAGCATATTCGTATTT	59.848	41.667	0.00	0.00	44.61	1.40
3763	4990	3.679980	GTCGGCATCAGCATATTCGTATT	59.320	43.478	0.00	0.00	44.61	1.89
3764	4991	3.254060	GTCGGCATCAGCATATTCGTAT	58.746	45.455	0.00	0.00	44.61	3.06
3765	4992	2.035321	TGTCGGCATCAGCATATTCGTA	59.965	45.455	0.00	0.00	44.61	3.43
3766	4993	1.202521	TGTCGGCATCAGCATATTCGT	60.203	47.619	0.00	0.00	44.61	3.85
3767	4994	1.458445	CTGTCGGCATCAGCATATTCG	59.542	52.381	0.00	0.00	44.61	3.34
3768	4995	2.759191	TCTGTCGGCATCAGCATATTC	58.241	47.619	0.00	0.00	44.61	1.75
3769	4996	2.916702	TCTGTCGGCATCAGCATATT	57.083	45.000	0.00	0.00	44.61	1.28
3770	4997	2.916702	TTCTGTCGGCATCAGCATAT	57.083	45.000	0.00	0.00	44.61	1.78
3771	4998	2.916702	ATTCTGTCGGCATCAGCATA	57.083	45.000	0.00	0.00	44.61	3.14
3772	4999	2.048444	AATTCTGTCGGCATCAGCAT	57.952	45.000	0.00	0.00	44.61	3.79
3773	5000	1.825090	AAATTCTGTCGGCATCAGCA	58.175	45.000	0.00	0.00	44.61	4.41
3774	5001	2.286654	GCTAAATTCTGTCGGCATCAGC	60.287	50.000	0.00	0.00	41.10	4.26
3775	5002	3.002042	CAGCTAAATTCTGTCGGCATCAG	59.998	47.826	0.00	0.34	0.00	2.90
3776	5003	2.938451	CAGCTAAATTCTGTCGGCATCA	59.062	45.455	0.00	0.00	0.00	3.07
3777	5004	2.286654	GCAGCTAAATTCTGTCGGCATC	60.287	50.000	0.00	0.00	34.21	3.91
3778	5005	1.672881	GCAGCTAAATTCTGTCGGCAT	59.327	47.619	0.00	0.00	34.21	4.40
3779	5006	1.086696	GCAGCTAAATTCTGTCGGCA	58.913	50.000	0.00	0.00	34.21	5.69
3780	5007	1.086696	TGCAGCTAAATTCTGTCGGC	58.913	50.000	0.00	0.00	34.21	5.54
3781	5008	2.349886	GAGTGCAGCTAAATTCTGTCGG	59.650	50.000	0.00	0.00	34.21	4.79
3782	5009	3.061831	CAGAGTGCAGCTAAATTCTGTCG	59.938	47.826	10.51	0.00	34.21	4.35
3783	5010	4.248859	TCAGAGTGCAGCTAAATTCTGTC	58.751	43.478	15.58	0.00	34.97	3.51
3784	5011	4.277515	TCAGAGTGCAGCTAAATTCTGT	57.722	40.909	15.58	0.00	34.97	3.41
3785	5012	4.694509	AGTTCAGAGTGCAGCTAAATTCTG	59.305	41.667	11.86	11.86	34.76	3.02
3786	5013	4.904241	AGTTCAGAGTGCAGCTAAATTCT	58.096	39.130	0.00	0.00	0.00	2.40
3787	5014	4.692625	TGAGTTCAGAGTGCAGCTAAATTC	59.307	41.667	0.00	0.00	0.00	2.17
3788	5015	4.453819	GTGAGTTCAGAGTGCAGCTAAATT	59.546	41.667	0.00	0.00	0.00	1.82
3789	5016	3.999663	GTGAGTTCAGAGTGCAGCTAAAT	59.000	43.478	0.00	0.00	0.00	1.40
3790	5017	3.070159	AGTGAGTTCAGAGTGCAGCTAAA	59.930	43.478	0.00	0.00	0.00	1.85
3791	5018	2.630098	AGTGAGTTCAGAGTGCAGCTAA	59.370	45.455	0.00	0.00	0.00	3.09
3792	5019	2.242926	AGTGAGTTCAGAGTGCAGCTA	58.757	47.619	0.00	0.00	0.00	3.32
3793	5020	1.047002	AGTGAGTTCAGAGTGCAGCT	58.953	50.000	0.00	0.00	0.00	4.24
3794	5021	1.876322	AAGTGAGTTCAGAGTGCAGC	58.124	50.000	0.00	0.00	0.00	5.25
3795	5022	5.290643	GCTTATAAGTGAGTTCAGAGTGCAG	59.709	44.000	13.91	0.00	0.00	4.41
3796	5023	5.171476	GCTTATAAGTGAGTTCAGAGTGCA	58.829	41.667	13.91	0.00	0.00	4.57
3797	5024	5.171476	TGCTTATAAGTGAGTTCAGAGTGC	58.829	41.667	13.91	0.00	0.00	4.40
3798	5025	7.658179	TTTGCTTATAAGTGAGTTCAGAGTG	57.342	36.000	13.91	0.00	0.00	3.51
3799	5026	8.854614	ATTTTGCTTATAAGTGAGTTCAGAGT	57.145	30.769	13.91	0.00	0.00	3.24
3801	5028	9.719355	TGTATTTTGCTTATAAGTGAGTTCAGA	57.281	29.630	13.91	0.00	0.00	3.27
3802	5029	9.760660	GTGTATTTTGCTTATAAGTGAGTTCAG	57.239	33.333	13.91	0.00	0.00	3.02
3803	5030	8.726988	GGTGTATTTTGCTTATAAGTGAGTTCA	58.273	33.333	13.91	0.00	0.00	3.18
3804	5031	8.726988	TGGTGTATTTTGCTTATAAGTGAGTTC	58.273	33.333	13.91	0.00	0.00	3.01
3805	5032	8.630054	TGGTGTATTTTGCTTATAAGTGAGTT	57.370	30.769	13.91	0.49	0.00	3.01
3818	5045	9.516314	GAACCTATATTTTCTGGTGTATTTTGC	57.484	33.333	0.00	0.00	32.53	3.68
3828	5055	8.217799	TGGATACCTTGAACCTATATTTTCTGG	58.782	37.037	0.00	0.00	0.00	3.86
3840	5067	3.434940	ACAACCTGGATACCTTGAACC	57.565	47.619	0.00	0.00	0.00	3.62
3852	5080	2.705658	TGCATATCCCTCTACAACCTGG	59.294	50.000	0.00	0.00	0.00	4.45
3859	5087	5.489792	TCCAGAATTGCATATCCCTCTAC	57.510	43.478	0.00	0.00	0.00	2.59
3874	5102	1.414181	CAGTCGGCCTACATCCAGAAT	59.586	52.381	10.45	0.00	0.00	2.40
3894	5122	0.531532	ATCTGTCAGTATGCCGCTGC	60.532	55.000	0.00	0.00	34.76	5.25
3895	5123	1.215244	CATCTGTCAGTATGCCGCTG	58.785	55.000	0.00	0.00	34.76	5.18
3896	5124	0.826715	ACATCTGTCAGTATGCCGCT	59.173	50.000	0.00	0.00	34.76	5.52
3897	5125	0.933097	CACATCTGTCAGTATGCCGC	59.067	55.000	0.00	0.00	34.76	6.53
3898	5126	0.933097	GCACATCTGTCAGTATGCCG	59.067	55.000	12.06	6.34	34.76	5.69
3899	5127	2.208431	GAGCACATCTGTCAGTATGCC	58.792	52.381	16.77	8.91	34.76	4.40
3900	5128	2.606725	GTGAGCACATCTGTCAGTATGC	59.393	50.000	14.14	14.14	34.76	3.14
3911	5139	4.498241	TGTACAATGAGAGTGAGCACATC	58.502	43.478	3.19	1.67	0.00	3.06
3914	5142	3.677121	CACTGTACAATGAGAGTGAGCAC	59.323	47.826	0.00	0.00	38.49	4.40
3944	5184	7.430992	TCGTCTGAAGTATTACGTATATGCT	57.569	36.000	0.00	0.00	36.73	3.79
3955	5196	7.745620	ACTTGGAATTTTCGTCTGAAGTATT	57.254	32.000	0.00	0.00	35.06	1.89

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.