Multiple sequence alignment - TraesCS1D01G099500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G099500 chr1D 100.000 2513 0 0 1 2513 86784823 86782311 0.000000e+00 4641.0
1 TraesCS1D01G099500 chr1D 91.760 267 22 0 96 362 37961108 37961374 3.050000e-99 372.0
2 TraesCS1D01G099500 chr1B 90.123 1053 57 15 791 1842 139481787 139480781 0.000000e+00 1325.0
3 TraesCS1D01G099500 chr1B 82.843 408 35 17 2129 2513 139480686 139480291 1.440000e-87 333.0
4 TraesCS1D01G099500 chr1A 89.332 1078 67 28 791 1867 82153377 82152347 0.000000e+00 1310.0
5 TraesCS1D01G099500 chr1A 87.952 166 19 1 1859 2024 82151773 82151609 7.090000e-46 195.0
6 TraesCS1D01G099500 chr1A 97.368 38 1 0 1935 1972 448626784 448626747 5.800000e-07 65.8
7 TraesCS1D01G099500 chr2D 94.424 269 14 1 94 362 582151245 582151512 1.800000e-111 412.0
8 TraesCS1D01G099500 chr2D 90.672 268 22 2 97 362 130427652 130427918 1.110000e-93 353.0
9 TraesCS1D01G099500 chr2D 95.775 213 8 1 352 564 380822669 380822458 2.390000e-90 342.0
10 TraesCS1D01G099500 chr7B 93.633 267 16 1 96 362 1365608 1365343 5.040000e-107 398.0
11 TraesCS1D01G099500 chr7A 93.233 266 18 0 97 362 85587580 85587845 2.340000e-105 392.0
12 TraesCS1D01G099500 chr5D 93.233 266 18 0 97 362 32691938 32691673 2.340000e-105 392.0
13 TraesCS1D01G099500 chr5D 97.115 208 6 0 359 566 446675043 446674836 3.980000e-93 351.0
14 TraesCS1D01G099500 chr5D 92.143 140 9 2 561 699 32691676 32691538 1.970000e-46 196.0
15 TraesCS1D01G099500 chr5D 87.302 63 6 2 1985 2046 457516089 457516150 1.250000e-08 71.3
16 TraesCS1D01G099500 chr5A 91.011 267 23 1 97 362 637102583 637102849 2.380000e-95 359.0
17 TraesCS1D01G099500 chr5A 91.221 262 23 0 101 362 637103001 637103262 8.550000e-95 357.0
18 TraesCS1D01G099500 chr5A 91.221 262 23 0 101 362 637103419 637103680 8.550000e-95 357.0
19 TraesCS1D01G099500 chr5A 87.857 140 15 2 561 699 637103677 637103815 2.000000e-36 163.0
20 TraesCS1D01G099500 chr5A 87.857 140 16 1 561 699 637104082 637104221 2.000000e-36 163.0
21 TraesCS1D01G099500 chr7D 97.101 207 6 0 359 565 110577990 110577784 1.430000e-92 350.0
22 TraesCS1D01G099500 chr7D 81.690 142 20 3 1956 2092 279743647 279743787 2.040000e-21 113.0
23 TraesCS1D01G099500 chr7D 82.927 82 10 4 1894 1973 230491102 230491023 1.250000e-08 71.3
24 TraesCS1D01G099500 chr6B 97.101 207 6 0 359 565 205275987 205275781 1.430000e-92 350.0
25 TraesCS1D01G099500 chr6B 96.602 206 7 0 360 565 447685133 447685338 2.390000e-90 342.0
26 TraesCS1D01G099500 chr6B 86.458 96 9 4 1956 2049 219188082 219187989 4.420000e-18 102.0
27 TraesCS1D01G099500 chr3B 96.602 206 7 0 359 564 716218925 716219130 2.390000e-90 342.0
28 TraesCS1D01G099500 chr3B 95.714 210 8 1 356 565 723787684 723787892 1.110000e-88 337.0
29 TraesCS1D01G099500 chr3B 80.469 128 20 5 1965 2091 654346216 654346093 2.660000e-15 93.5
30 TraesCS1D01G099500 chr3B 80.469 128 20 5 1965 2091 654355610 654355487 2.660000e-15 93.5
31 TraesCS1D01G099500 chr3B 85.556 90 10 3 1956 2044 488531295 488531382 9.570000e-15 91.6
32 TraesCS1D01G099500 chr3B 75.796 157 35 2 1971 2127 41966352 41966199 2.680000e-10 76.8
33 TraesCS1D01G099500 chr4A 95.755 212 8 1 361 572 697946151 697946361 8.610000e-90 340.0
34 TraesCS1D01G099500 chr4A 100.000 29 0 0 1935 1963 29156612 29156640 1.000000e-03 54.7
35 TraesCS1D01G099500 chr3A 95.349 215 9 1 358 571 699767493 699767707 8.610000e-90 340.0
36 TraesCS1D01G099500 chrUn 94.262 122 6 1 564 684 9906617 9906496 4.270000e-43 185.0
37 TraesCS1D01G099500 chr4B 87.931 116 10 4 2399 2512 658580471 658580584 1.570000e-27 134.0
38 TraesCS1D01G099500 chr2B 79.021 143 26 4 1956 2096 218292510 218292370 7.400000e-16 95.3
39 TraesCS1D01G099500 chr4D 80.882 68 12 1 1895 1962 405765307 405765241 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G099500 chr1D 86782311 86784823 2512 True 4641.0 4641 100.0000 1 2513 1 chr1D.!!$R1 2512
1 TraesCS1D01G099500 chr1B 139480291 139481787 1496 True 829.0 1325 86.4830 791 2513 2 chr1B.!!$R1 1722
2 TraesCS1D01G099500 chr1A 82151609 82153377 1768 True 752.5 1310 88.6420 791 2024 2 chr1A.!!$R2 1233
3 TraesCS1D01G099500 chr5A 637102583 637104221 1638 False 279.8 359 89.8334 97 699 5 chr5A.!!$F1 602

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
92 93 0.032615 ACTTGGCCAGGTTTGGTTGA 60.033 50.0 16.01 0.0 46.8 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2078 3950 0.179004 AGGTGACCATGGCAAAACGA 60.179 50.0 13.04 0.0 0.0 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 1.021968 CCTGTTTATAACTGGGCCGC 58.978 55.000 0.00 0.00 44.19 6.53
25 26 1.021968 CTGTTTATAACTGGGCCGCC 58.978 55.000 0.00 0.00 0.00 6.13
26 27 0.745128 TGTTTATAACTGGGCCGCCG 60.745 55.000 2.55 0.00 0.00 6.46
27 28 1.820481 TTTATAACTGGGCCGCCGC 60.820 57.895 2.55 0.00 0.00 6.53
41 42 4.308458 CCGCCTTGGACCGTGACA 62.308 66.667 0.00 0.00 42.00 3.58
42 43 2.047274 CGCCTTGGACCGTGACAT 60.047 61.111 0.00 0.00 0.00 3.06
43 44 2.390599 CGCCTTGGACCGTGACATG 61.391 63.158 0.00 0.00 0.00 3.21
44 45 2.690778 GCCTTGGACCGTGACATGC 61.691 63.158 0.00 0.00 0.00 4.06
45 46 1.003355 CCTTGGACCGTGACATGCT 60.003 57.895 0.00 0.00 0.00 3.79
46 47 0.249120 CCTTGGACCGTGACATGCTA 59.751 55.000 0.00 0.00 0.00 3.49
47 48 1.645034 CTTGGACCGTGACATGCTAG 58.355 55.000 0.00 0.00 0.00 3.42
48 49 0.391130 TTGGACCGTGACATGCTAGC 60.391 55.000 8.10 8.10 0.00 3.42
49 50 1.218047 GGACCGTGACATGCTAGCA 59.782 57.895 21.85 21.85 0.00 3.49
50 51 0.807667 GGACCGTGACATGCTAGCAG 60.808 60.000 23.89 16.67 0.00 4.24
51 52 0.807667 GACCGTGACATGCTAGCAGG 60.808 60.000 26.75 26.75 0.00 4.85
52 53 1.522355 CCGTGACATGCTAGCAGGG 60.522 63.158 30.74 22.81 31.33 4.45
53 54 1.219124 CGTGACATGCTAGCAGGGT 59.781 57.895 30.74 25.65 31.33 4.34
54 55 0.391661 CGTGACATGCTAGCAGGGTT 60.392 55.000 30.74 13.14 31.33 4.11
55 56 1.134818 CGTGACATGCTAGCAGGGTTA 60.135 52.381 30.74 20.42 31.33 2.85
56 57 2.676750 CGTGACATGCTAGCAGGGTTAA 60.677 50.000 30.74 16.42 31.33 2.01
57 58 2.939103 GTGACATGCTAGCAGGGTTAAG 59.061 50.000 30.74 12.98 31.33 1.85
58 59 2.092968 TGACATGCTAGCAGGGTTAAGG 60.093 50.000 30.74 6.70 31.33 2.69
59 60 1.212935 ACATGCTAGCAGGGTTAAGGG 59.787 52.381 30.74 10.50 31.33 3.95
60 61 0.846693 ATGCTAGCAGGGTTAAGGGG 59.153 55.000 23.89 0.00 0.00 4.79
61 62 1.152943 GCTAGCAGGGTTAAGGGGC 60.153 63.158 10.63 0.00 0.00 5.80
62 63 1.532238 CTAGCAGGGTTAAGGGGCC 59.468 63.158 0.00 0.00 0.00 5.80
63 64 1.996070 CTAGCAGGGTTAAGGGGCCC 61.996 65.000 17.12 17.12 45.16 5.80
89 90 1.048160 CCAACTTGGCCAGGTTTGGT 61.048 55.000 29.10 7.34 46.80 3.67
90 91 0.829990 CAACTTGGCCAGGTTTGGTT 59.170 50.000 29.10 13.85 46.80 3.67
91 92 0.829990 AACTTGGCCAGGTTTGGTTG 59.170 50.000 26.39 2.85 46.80 3.77
92 93 0.032615 ACTTGGCCAGGTTTGGTTGA 60.033 50.000 16.01 0.00 46.80 3.18
93 94 0.389025 CTTGGCCAGGTTTGGTTGAC 59.611 55.000 5.11 0.00 46.80 3.18
94 95 1.045911 TTGGCCAGGTTTGGTTGACC 61.046 55.000 5.11 0.00 46.80 4.02
95 96 2.561037 GGCCAGGTTTGGTTGACCG 61.561 63.158 0.00 0.00 46.80 4.79
144 145 6.820656 ACATTAGGTGAGATTGTGAGATCAAC 59.179 38.462 0.00 0.00 0.00 3.18
147 148 3.054802 GGTGAGATTGTGAGATCAACCCT 60.055 47.826 0.00 0.00 32.81 4.34
257 1090 7.963981 TCAGCTCAAAACTCGAAGTATATTTG 58.036 34.615 0.00 0.00 0.00 2.32
321 1154 5.472137 GCTTTGGGTGAATAGTACTTTGACA 59.528 40.000 0.00 0.00 0.00 3.58
337 1575 5.934625 ACTTTGACACTATTCATGTCCAGTC 59.065 40.000 2.87 0.00 44.91 3.51
371 1609 9.883142 TTTTATTTCTATTAATGGCCCTGTTTG 57.117 29.630 0.00 0.00 0.00 2.93
372 1610 8.830915 TTATTTCTATTAATGGCCCTGTTTGA 57.169 30.769 0.00 0.00 0.00 2.69
373 1611 7.732222 ATTTCTATTAATGGCCCTGTTTGAA 57.268 32.000 0.00 0.00 0.00 2.69
374 1612 7.732222 TTTCTATTAATGGCCCTGTTTGAAT 57.268 32.000 0.00 0.00 0.00 2.57
375 1613 6.959639 TCTATTAATGGCCCTGTTTGAATC 57.040 37.500 0.00 0.00 0.00 2.52
376 1614 6.430864 TCTATTAATGGCCCTGTTTGAATCA 58.569 36.000 0.00 0.00 0.00 2.57
377 1615 7.068702 TCTATTAATGGCCCTGTTTGAATCAT 58.931 34.615 0.00 0.00 0.00 2.45
378 1616 3.899052 AATGGCCCTGTTTGAATCATG 57.101 42.857 0.00 0.00 0.00 3.07
379 1617 1.559368 TGGCCCTGTTTGAATCATGG 58.441 50.000 0.00 0.00 0.00 3.66
380 1618 0.826062 GGCCCTGTTTGAATCATGGG 59.174 55.000 0.00 6.73 37.76 4.00
381 1619 0.826062 GCCCTGTTTGAATCATGGGG 59.174 55.000 11.18 8.73 35.41 4.96
382 1620 1.896755 GCCCTGTTTGAATCATGGGGT 60.897 52.381 11.18 0.00 35.41 4.95
383 1621 2.539302 CCCTGTTTGAATCATGGGGTT 58.461 47.619 0.00 0.00 0.00 4.11
384 1622 3.707316 CCCTGTTTGAATCATGGGGTTA 58.293 45.455 0.00 0.00 0.00 2.85
385 1623 3.701040 CCCTGTTTGAATCATGGGGTTAG 59.299 47.826 0.00 0.00 0.00 2.34
386 1624 4.569653 CCCTGTTTGAATCATGGGGTTAGA 60.570 45.833 0.00 0.00 0.00 2.10
387 1625 4.641989 CCTGTTTGAATCATGGGGTTAGAG 59.358 45.833 0.00 0.00 0.00 2.43
388 1626 4.016444 TGTTTGAATCATGGGGTTAGAGC 58.984 43.478 0.00 0.00 0.00 4.09
389 1627 4.263905 TGTTTGAATCATGGGGTTAGAGCT 60.264 41.667 0.00 0.00 0.00 4.09
390 1628 5.045213 TGTTTGAATCATGGGGTTAGAGCTA 60.045 40.000 0.00 0.00 0.00 3.32
391 1629 4.963318 TGAATCATGGGGTTAGAGCTAG 57.037 45.455 0.00 0.00 0.00 3.42
392 1630 4.298626 TGAATCATGGGGTTAGAGCTAGT 58.701 43.478 0.00 0.00 0.00 2.57
393 1631 4.721776 TGAATCATGGGGTTAGAGCTAGTT 59.278 41.667 0.00 0.00 0.00 2.24
394 1632 5.191722 TGAATCATGGGGTTAGAGCTAGTTT 59.808 40.000 0.00 0.00 0.00 2.66
395 1633 4.487714 TCATGGGGTTAGAGCTAGTTTG 57.512 45.455 0.00 0.00 0.00 2.93
396 1634 3.199946 TCATGGGGTTAGAGCTAGTTTGG 59.800 47.826 0.00 0.00 0.00 3.28
397 1635 1.913419 TGGGGTTAGAGCTAGTTTGGG 59.087 52.381 0.00 0.00 0.00 4.12
398 1636 1.914108 GGGGTTAGAGCTAGTTTGGGT 59.086 52.381 0.00 0.00 0.00 4.51
399 1637 2.307980 GGGGTTAGAGCTAGTTTGGGTT 59.692 50.000 0.00 0.00 0.00 4.11
400 1638 3.520721 GGGGTTAGAGCTAGTTTGGGTTA 59.479 47.826 0.00 0.00 0.00 2.85
401 1639 4.383880 GGGGTTAGAGCTAGTTTGGGTTAG 60.384 50.000 0.00 0.00 0.00 2.34
402 1640 4.224594 GGGTTAGAGCTAGTTTGGGTTAGT 59.775 45.833 0.00 0.00 0.00 2.24
403 1641 5.280368 GGGTTAGAGCTAGTTTGGGTTAGTT 60.280 44.000 0.00 0.00 0.00 2.24
404 1642 5.642491 GGTTAGAGCTAGTTTGGGTTAGTTG 59.358 44.000 0.00 0.00 0.00 3.16
405 1643 4.287766 AGAGCTAGTTTGGGTTAGTTGG 57.712 45.455 0.00 0.00 0.00 3.77
406 1644 3.908103 AGAGCTAGTTTGGGTTAGTTGGA 59.092 43.478 0.00 0.00 0.00 3.53
407 1645 4.020128 AGAGCTAGTTTGGGTTAGTTGGAG 60.020 45.833 0.00 0.00 0.00 3.86
408 1646 3.009143 AGCTAGTTTGGGTTAGTTGGAGG 59.991 47.826 0.00 0.00 0.00 4.30
409 1647 2.287977 AGTTTGGGTTAGTTGGAGGC 57.712 50.000 0.00 0.00 0.00 4.70
410 1648 1.780919 AGTTTGGGTTAGTTGGAGGCT 59.219 47.619 0.00 0.00 0.00 4.58
411 1649 2.177016 AGTTTGGGTTAGTTGGAGGCTT 59.823 45.455 0.00 0.00 0.00 4.35
412 1650 3.396611 AGTTTGGGTTAGTTGGAGGCTTA 59.603 43.478 0.00 0.00 0.00 3.09
413 1651 4.141111 AGTTTGGGTTAGTTGGAGGCTTAA 60.141 41.667 0.00 0.00 0.00 1.85
414 1652 4.456662 TTGGGTTAGTTGGAGGCTTAAA 57.543 40.909 0.00 0.00 0.00 1.52
415 1653 4.668138 TGGGTTAGTTGGAGGCTTAAAT 57.332 40.909 0.00 0.00 0.00 1.40
416 1654 5.782677 TGGGTTAGTTGGAGGCTTAAATA 57.217 39.130 0.00 0.00 0.00 1.40
417 1655 6.142259 TGGGTTAGTTGGAGGCTTAAATAA 57.858 37.500 0.00 0.00 0.00 1.40
418 1656 5.947566 TGGGTTAGTTGGAGGCTTAAATAAC 59.052 40.000 18.92 18.92 36.90 1.89
419 1657 6.446781 GGTTAGTTGGAGGCTTAAATAACC 57.553 41.667 25.07 25.07 44.77 2.85
420 1658 5.359009 GGTTAGTTGGAGGCTTAAATAACCC 59.641 44.000 26.90 17.14 45.01 4.11
421 1659 4.668138 AGTTGGAGGCTTAAATAACCCA 57.332 40.909 0.00 0.00 0.00 4.51
422 1660 5.005628 AGTTGGAGGCTTAAATAACCCAA 57.994 39.130 0.00 0.00 0.00 4.12
423 1661 5.399113 AGTTGGAGGCTTAAATAACCCAAA 58.601 37.500 2.05 0.00 34.47 3.28
424 1662 5.841783 AGTTGGAGGCTTAAATAACCCAAAA 59.158 36.000 2.05 0.00 34.47 2.44
425 1663 5.993748 TGGAGGCTTAAATAACCCAAAAG 57.006 39.130 0.00 0.00 0.00 2.27
426 1664 5.399113 TGGAGGCTTAAATAACCCAAAAGT 58.601 37.500 0.00 0.00 0.00 2.66
427 1665 6.553857 TGGAGGCTTAAATAACCCAAAAGTA 58.446 36.000 0.00 0.00 0.00 2.24
428 1666 7.186268 TGGAGGCTTAAATAACCCAAAAGTAT 58.814 34.615 0.00 0.00 0.00 2.12
429 1667 7.340999 TGGAGGCTTAAATAACCCAAAAGTATC 59.659 37.037 0.00 0.00 0.00 2.24
430 1668 7.201884 GGAGGCTTAAATAACCCAAAAGTATCC 60.202 40.741 0.00 0.00 0.00 2.59
431 1669 7.186268 AGGCTTAAATAACCCAAAAGTATCCA 58.814 34.615 0.00 0.00 0.00 3.41
432 1670 7.676468 AGGCTTAAATAACCCAAAAGTATCCAA 59.324 33.333 0.00 0.00 0.00 3.53
433 1671 8.315482 GGCTTAAATAACCCAAAAGTATCCAAA 58.685 33.333 0.00 0.00 0.00 3.28
434 1672 9.146984 GCTTAAATAACCCAAAAGTATCCAAAC 57.853 33.333 0.00 0.00 0.00 2.93
437 1675 6.850752 ATAACCCAAAAGTATCCAAACAGG 57.149 37.500 0.00 0.00 39.47 4.00
438 1676 4.193240 ACCCAAAAGTATCCAAACAGGT 57.807 40.909 0.00 0.00 39.02 4.00
439 1677 5.327737 ACCCAAAAGTATCCAAACAGGTA 57.672 39.130 0.00 0.00 39.02 3.08
440 1678 5.321927 ACCCAAAAGTATCCAAACAGGTAG 58.678 41.667 0.00 0.00 39.02 3.18
441 1679 4.705023 CCCAAAAGTATCCAAACAGGTAGG 59.295 45.833 0.00 0.00 39.02 3.18
442 1680 4.705023 CCAAAAGTATCCAAACAGGTAGGG 59.295 45.833 0.00 0.00 39.02 3.53
443 1681 5.321927 CAAAAGTATCCAAACAGGTAGGGT 58.678 41.667 0.00 0.00 39.02 4.34
444 1682 5.594199 AAAGTATCCAAACAGGTAGGGTT 57.406 39.130 0.00 0.00 39.02 4.11
445 1683 6.707273 AAAGTATCCAAACAGGTAGGGTTA 57.293 37.500 0.00 0.00 39.02 2.85
446 1684 5.952347 AGTATCCAAACAGGTAGGGTTAG 57.048 43.478 0.00 0.00 39.02 2.34
447 1685 5.596763 AGTATCCAAACAGGTAGGGTTAGA 58.403 41.667 0.00 0.00 39.02 2.10
448 1686 5.661759 AGTATCCAAACAGGTAGGGTTAGAG 59.338 44.000 0.00 0.00 39.02 2.43
449 1687 3.865571 TCCAAACAGGTAGGGTTAGAGT 58.134 45.455 0.00 0.00 39.02 3.24
450 1688 3.581332 TCCAAACAGGTAGGGTTAGAGTG 59.419 47.826 0.00 0.00 39.02 3.51
451 1689 3.307480 CCAAACAGGTAGGGTTAGAGTGG 60.307 52.174 0.00 0.00 0.00 4.00
452 1690 2.249309 ACAGGTAGGGTTAGAGTGGG 57.751 55.000 0.00 0.00 0.00 4.61
453 1691 1.435959 ACAGGTAGGGTTAGAGTGGGT 59.564 52.381 0.00 0.00 0.00 4.51
454 1692 2.158050 ACAGGTAGGGTTAGAGTGGGTT 60.158 50.000 0.00 0.00 0.00 4.11
455 1693 3.078000 ACAGGTAGGGTTAGAGTGGGTTA 59.922 47.826 0.00 0.00 0.00 2.85
456 1694 3.705072 CAGGTAGGGTTAGAGTGGGTTAG 59.295 52.174 0.00 0.00 0.00 2.34
457 1695 3.339130 AGGTAGGGTTAGAGTGGGTTAGT 59.661 47.826 0.00 0.00 0.00 2.24
458 1696 4.099633 GGTAGGGTTAGAGTGGGTTAGTT 58.900 47.826 0.00 0.00 0.00 2.24
459 1697 4.161189 GGTAGGGTTAGAGTGGGTTAGTTC 59.839 50.000 0.00 0.00 0.00 3.01
460 1698 3.179685 AGGGTTAGAGTGGGTTAGTTCC 58.820 50.000 0.00 0.00 0.00 3.62
461 1699 2.908351 GGGTTAGAGTGGGTTAGTTCCA 59.092 50.000 0.00 0.00 0.00 3.53
462 1700 3.522343 GGGTTAGAGTGGGTTAGTTCCAT 59.478 47.826 0.00 0.00 36.58 3.41
463 1701 4.383880 GGGTTAGAGTGGGTTAGTTCCATC 60.384 50.000 0.00 0.00 36.58 3.51
464 1702 4.470304 GGTTAGAGTGGGTTAGTTCCATCT 59.530 45.833 0.00 0.00 36.58 2.90
465 1703 5.659971 GGTTAGAGTGGGTTAGTTCCATCTA 59.340 44.000 0.00 0.00 36.58 1.98
466 1704 6.155737 GGTTAGAGTGGGTTAGTTCCATCTAA 59.844 42.308 0.00 0.00 36.58 2.10
467 1705 5.678955 AGAGTGGGTTAGTTCCATCTAAC 57.321 43.478 7.74 7.74 45.03 2.34
477 1715 5.632034 AGTTCCATCTAACCCAACTATCC 57.368 43.478 0.00 0.00 0.00 2.59
478 1716 4.412528 AGTTCCATCTAACCCAACTATCCC 59.587 45.833 0.00 0.00 0.00 3.85
479 1717 2.969950 TCCATCTAACCCAACTATCCCG 59.030 50.000 0.00 0.00 0.00 5.14
480 1718 2.038557 CCATCTAACCCAACTATCCCGG 59.961 54.545 0.00 0.00 0.00 5.73
481 1719 2.555732 TCTAACCCAACTATCCCGGT 57.444 50.000 0.00 0.00 0.00 5.28
482 1720 2.112998 TCTAACCCAACTATCCCGGTG 58.887 52.381 0.00 0.00 0.00 4.94
483 1721 1.140252 CTAACCCAACTATCCCGGTGG 59.860 57.143 0.00 0.00 0.00 4.61
485 1723 0.981277 ACCCAACTATCCCGGTGGAG 60.981 60.000 8.06 0.31 46.08 3.86
486 1724 0.689745 CCCAACTATCCCGGTGGAGA 60.690 60.000 8.06 0.00 46.08 3.71
490 1728 2.431023 CTATCCCGGTGGAGAGGTG 58.569 63.158 0.00 0.00 44.71 4.00
491 1729 1.749334 CTATCCCGGTGGAGAGGTGC 61.749 65.000 0.00 0.00 44.71 5.01
492 1730 2.238319 TATCCCGGTGGAGAGGTGCT 62.238 60.000 0.00 0.00 46.08 4.40
493 1731 3.322466 CCCGGTGGAGAGGTGCTT 61.322 66.667 0.00 0.00 0.00 3.91
494 1732 1.987855 CCCGGTGGAGAGGTGCTTA 60.988 63.158 0.00 0.00 0.00 3.09
495 1733 1.338136 CCCGGTGGAGAGGTGCTTAT 61.338 60.000 0.00 0.00 0.00 1.73
496 1734 0.541863 CCGGTGGAGAGGTGCTTATT 59.458 55.000 0.00 0.00 0.00 1.40
497 1735 1.065418 CCGGTGGAGAGGTGCTTATTT 60.065 52.381 0.00 0.00 0.00 1.40
498 1736 2.009774 CGGTGGAGAGGTGCTTATTTG 58.990 52.381 0.00 0.00 0.00 2.32
499 1737 2.354704 CGGTGGAGAGGTGCTTATTTGA 60.355 50.000 0.00 0.00 0.00 2.69
500 1738 3.274288 GGTGGAGAGGTGCTTATTTGAG 58.726 50.000 0.00 0.00 0.00 3.02
501 1739 3.307762 GGTGGAGAGGTGCTTATTTGAGT 60.308 47.826 0.00 0.00 0.00 3.41
502 1740 4.327680 GTGGAGAGGTGCTTATTTGAGTT 58.672 43.478 0.00 0.00 0.00 3.01
503 1741 5.488341 GTGGAGAGGTGCTTATTTGAGTTA 58.512 41.667 0.00 0.00 0.00 2.24
504 1742 5.582665 GTGGAGAGGTGCTTATTTGAGTTAG 59.417 44.000 0.00 0.00 0.00 2.34
505 1743 5.483937 TGGAGAGGTGCTTATTTGAGTTAGA 59.516 40.000 0.00 0.00 0.00 2.10
506 1744 6.045955 GGAGAGGTGCTTATTTGAGTTAGAG 58.954 44.000 0.00 0.00 0.00 2.43
507 1745 6.351456 GGAGAGGTGCTTATTTGAGTTAGAGT 60.351 42.308 0.00 0.00 0.00 3.24
508 1746 6.402222 AGAGGTGCTTATTTGAGTTAGAGTG 58.598 40.000 0.00 0.00 0.00 3.51
509 1747 5.491982 AGGTGCTTATTTGAGTTAGAGTGG 58.508 41.667 0.00 0.00 0.00 4.00
510 1748 4.636206 GGTGCTTATTTGAGTTAGAGTGGG 59.364 45.833 0.00 0.00 0.00 4.61
511 1749 5.246307 GTGCTTATTTGAGTTAGAGTGGGT 58.754 41.667 0.00 0.00 0.00 4.51
512 1750 5.705905 GTGCTTATTTGAGTTAGAGTGGGTT 59.294 40.000 0.00 0.00 0.00 4.11
513 1751 6.877322 GTGCTTATTTGAGTTAGAGTGGGTTA 59.123 38.462 0.00 0.00 0.00 2.85
514 1752 7.064728 GTGCTTATTTGAGTTAGAGTGGGTTAG 59.935 40.741 0.00 0.00 0.00 2.34
515 1753 7.038587 TGCTTATTTGAGTTAGAGTGGGTTAGA 60.039 37.037 0.00 0.00 0.00 2.10
516 1754 7.822822 GCTTATTTGAGTTAGAGTGGGTTAGAA 59.177 37.037 0.00 0.00 0.00 2.10
517 1755 9.720769 CTTATTTGAGTTAGAGTGGGTTAGAAA 57.279 33.333 0.00 0.00 0.00 2.52
522 1760 9.498176 TTGAGTTAGAGTGGGTTAGAAAATAAC 57.502 33.333 0.00 0.00 0.00 1.89
523 1761 8.877195 TGAGTTAGAGTGGGTTAGAAAATAACT 58.123 33.333 0.00 0.00 34.57 2.24
524 1762 9.368674 GAGTTAGAGTGGGTTAGAAAATAACTC 57.631 37.037 0.00 0.00 39.27 3.01
525 1763 9.102453 AGTTAGAGTGGGTTAGAAAATAACTCT 57.898 33.333 7.50 7.50 43.79 3.24
553 1791 8.690680 CTCTAACTGTGTTAGAGTATCCAAAC 57.309 38.462 26.67 0.00 41.73 2.93
554 1792 8.185506 TCTAACTGTGTTAGAGTATCCAAACA 57.814 34.615 14.02 0.00 38.63 2.83
555 1793 8.304596 TCTAACTGTGTTAGAGTATCCAAACAG 58.695 37.037 14.02 0.00 40.68 3.16
556 1794 5.794894 ACTGTGTTAGAGTATCCAAACAGG 58.205 41.667 0.00 0.00 40.68 4.00
557 1795 5.160607 TGTGTTAGAGTATCCAAACAGGG 57.839 43.478 0.00 0.00 40.68 4.45
558 1796 3.939592 GTGTTAGAGTATCCAAACAGGGC 59.060 47.826 0.00 0.00 40.68 5.19
559 1797 3.054655 TGTTAGAGTATCCAAACAGGGCC 60.055 47.826 0.00 0.00 36.81 5.80
560 1798 1.668826 AGAGTATCCAAACAGGGCCA 58.331 50.000 6.18 0.00 38.24 5.36
561 1799 1.992557 AGAGTATCCAAACAGGGCCAA 59.007 47.619 6.18 0.00 38.24 4.52
562 1800 2.582636 AGAGTATCCAAACAGGGCCAAT 59.417 45.455 6.18 0.00 38.24 3.16
563 1801 2.689983 GAGTATCCAAACAGGGCCAATG 59.310 50.000 6.18 5.16 38.24 2.82
566 1804 2.214376 TCCAAACAGGGCCAATGTAG 57.786 50.000 12.78 8.91 38.24 2.74
580 1818 5.193679 GCCAATGTAGGTTGAATTAGGAGT 58.806 41.667 0.00 0.00 0.00 3.85
582 1820 6.404734 GCCAATGTAGGTTGAATTAGGAGTTG 60.405 42.308 0.00 0.00 0.00 3.16
586 1824 7.739498 TGTAGGTTGAATTAGGAGTTGAAAC 57.261 36.000 0.00 0.00 0.00 2.78
630 1868 5.049680 ACCGTTGATGTGTGTCTACAATTTC 60.050 40.000 0.00 0.00 38.82 2.17
634 1872 8.279800 CGTTGATGTGTGTCTACAATTTCTTTA 58.720 33.333 0.00 0.00 38.82 1.85
651 1889 9.581099 AATTTCTTTAAGAATGTTTGAACGTGT 57.419 25.926 8.31 0.00 33.67 4.49
702 1941 3.300032 TCGCCTAATGTGAGACCCT 57.700 52.632 0.00 0.00 0.00 4.34
703 1942 1.112113 TCGCCTAATGTGAGACCCTC 58.888 55.000 0.00 0.00 0.00 4.30
704 1943 1.115467 CGCCTAATGTGAGACCCTCT 58.885 55.000 0.00 0.00 0.00 3.69
705 1944 1.067821 CGCCTAATGTGAGACCCTCTC 59.932 57.143 0.00 0.00 43.65 3.20
706 1945 1.414550 GCCTAATGTGAGACCCTCTCC 59.585 57.143 0.00 0.00 42.73 3.71
707 1946 2.043227 CCTAATGTGAGACCCTCTCCC 58.957 57.143 0.00 0.00 42.73 4.30
708 1947 2.043227 CTAATGTGAGACCCTCTCCCC 58.957 57.143 0.00 0.00 42.73 4.81
709 1948 0.621862 AATGTGAGACCCTCTCCCCC 60.622 60.000 0.00 0.00 42.73 5.40
710 1949 2.760385 GTGAGACCCTCTCCCCCG 60.760 72.222 0.00 0.00 42.73 5.73
711 1950 2.944954 TGAGACCCTCTCCCCCGA 60.945 66.667 0.00 0.00 42.73 5.14
712 1951 2.442458 GAGACCCTCTCCCCCGAC 60.442 72.222 0.00 0.00 37.55 4.79
713 1952 4.444081 AGACCCTCTCCCCCGACG 62.444 72.222 0.00 0.00 0.00 5.12
727 1966 4.717313 GACGGCCCCCTGGTTGAC 62.717 72.222 0.00 0.00 0.00 3.18
747 1986 4.864334 CCCGTGCCAGATGCTCCC 62.864 72.222 0.00 0.00 42.00 4.30
748 1987 4.864334 CCGTGCCAGATGCTCCCC 62.864 72.222 0.00 0.00 42.00 4.81
749 1988 4.100084 CGTGCCAGATGCTCCCCA 62.100 66.667 0.00 0.00 42.00 4.96
750 1989 2.356278 GTGCCAGATGCTCCCCAA 59.644 61.111 0.00 0.00 42.00 4.12
751 1990 1.304381 GTGCCAGATGCTCCCCAAA 60.304 57.895 0.00 0.00 42.00 3.28
752 1991 0.899717 GTGCCAGATGCTCCCCAAAA 60.900 55.000 0.00 0.00 42.00 2.44
753 1992 0.899717 TGCCAGATGCTCCCCAAAAC 60.900 55.000 0.00 0.00 42.00 2.43
754 1993 0.899717 GCCAGATGCTCCCCAAAACA 60.900 55.000 0.00 0.00 36.87 2.83
755 1994 0.890683 CCAGATGCTCCCCAAAACAC 59.109 55.000 0.00 0.00 0.00 3.32
756 1995 0.890683 CAGATGCTCCCCAAAACACC 59.109 55.000 0.00 0.00 0.00 4.16
757 1996 0.779997 AGATGCTCCCCAAAACACCT 59.220 50.000 0.00 0.00 0.00 4.00
758 1997 1.147817 AGATGCTCCCCAAAACACCTT 59.852 47.619 0.00 0.00 0.00 3.50
759 1998 1.546029 GATGCTCCCCAAAACACCTTC 59.454 52.381 0.00 0.00 0.00 3.46
760 1999 0.469144 TGCTCCCCAAAACACCTTCC 60.469 55.000 0.00 0.00 0.00 3.46
761 2000 1.185618 GCTCCCCAAAACACCTTCCC 61.186 60.000 0.00 0.00 0.00 3.97
762 2001 0.893727 CTCCCCAAAACACCTTCCCG 60.894 60.000 0.00 0.00 0.00 5.14
763 2002 1.152631 CCCCAAAACACCTTCCCGT 60.153 57.895 0.00 0.00 0.00 5.28
764 2003 1.460273 CCCCAAAACACCTTCCCGTG 61.460 60.000 0.00 0.00 39.75 4.94
765 2004 0.466555 CCCAAAACACCTTCCCGTGA 60.467 55.000 0.00 0.00 37.20 4.35
766 2005 0.666374 CCAAAACACCTTCCCGTGAC 59.334 55.000 0.00 0.00 37.20 3.67
767 2006 1.384525 CAAAACACCTTCCCGTGACA 58.615 50.000 0.00 0.00 37.20 3.58
768 2007 1.746220 CAAAACACCTTCCCGTGACAA 59.254 47.619 0.00 0.00 37.20 3.18
769 2008 2.131776 AAACACCTTCCCGTGACAAA 57.868 45.000 0.00 0.00 37.20 2.83
770 2009 2.131776 AACACCTTCCCGTGACAAAA 57.868 45.000 0.00 0.00 37.20 2.44
771 2010 2.131776 ACACCTTCCCGTGACAAAAA 57.868 45.000 0.00 0.00 37.20 1.94
788 2027 3.336138 AAAAACCTTTCCGTGGCAAAA 57.664 38.095 0.00 0.00 0.00 2.44
789 2028 3.552132 AAAACCTTTCCGTGGCAAAAT 57.448 38.095 0.00 0.00 0.00 1.82
806 2045 2.089600 AATTACTCCCCCTCCTCTCG 57.910 55.000 0.00 0.00 0.00 4.04
867 2106 2.815647 CGCCTTGCCCGTCTCTTC 60.816 66.667 0.00 0.00 0.00 2.87
879 2118 2.279784 CTCTTCATCGGAGCCGGC 60.280 66.667 21.89 21.89 40.25 6.13
882 2121 3.798954 CTTCATCGGAGCCGGCCTC 62.799 68.421 26.15 19.50 40.25 4.70
907 2146 3.368236 GGAATAGGTAGATTGATTCGCGC 59.632 47.826 0.00 0.00 0.00 6.86
924 2163 3.094062 GCGTGCTAGATCCAGGCCA 62.094 63.158 5.01 0.00 37.94 5.36
929 2168 1.360551 CTAGATCCAGGCCACGTCG 59.639 63.158 5.01 0.00 0.00 5.12
937 2176 1.079819 AGGCCACGTCGTCATCAAG 60.080 57.895 5.01 0.00 0.00 3.02
945 2184 1.634702 GTCGTCATCAAGAGGCTGAC 58.365 55.000 0.00 0.00 36.72 3.51
957 2196 0.037590 AGGCTGACTGTCTCTCGACT 59.962 55.000 9.51 0.00 40.86 4.18
958 2197 1.279558 AGGCTGACTGTCTCTCGACTA 59.720 52.381 9.51 0.00 40.86 2.59
959 2198 1.668751 GGCTGACTGTCTCTCGACTAG 59.331 57.143 9.51 0.00 40.86 2.57
975 2214 3.607741 GACTAGTAGGGTTTGAAAGGGC 58.392 50.000 0.00 0.00 0.00 5.19
1407 2647 3.470888 CGTTCCGAGATGCCCCCT 61.471 66.667 0.00 0.00 0.00 4.79
1422 2662 4.189188 CCTAGGTCCGCCGACGTG 62.189 72.222 10.10 1.89 40.17 4.49
1423 2663 3.437795 CTAGGTCCGCCGACGTGT 61.438 66.667 10.10 0.00 40.17 4.49
1424 2664 3.392595 CTAGGTCCGCCGACGTGTC 62.393 68.421 10.10 0.00 40.17 3.67
1548 2794 2.156098 GCCGTCCCTGTTTTATGTTCA 58.844 47.619 0.00 0.00 0.00 3.18
1568 2814 7.154656 TGTTCATCTGAATATCTGATTACCGG 58.845 38.462 0.00 0.00 33.58 5.28
1618 2864 9.118300 GAAATTACTCTCCTCAATGTTCATCAT 57.882 33.333 0.00 0.00 38.57 2.45
1633 2879 7.160547 TGTTCATCATAACTACCACTTCGTA 57.839 36.000 0.00 0.00 0.00 3.43
1634 2880 7.778083 TGTTCATCATAACTACCACTTCGTAT 58.222 34.615 0.00 0.00 0.00 3.06
1635 2881 7.919091 TGTTCATCATAACTACCACTTCGTATC 59.081 37.037 0.00 0.00 0.00 2.24
1636 2882 7.576861 TCATCATAACTACCACTTCGTATCA 57.423 36.000 0.00 0.00 0.00 2.15
1644 2890 6.460781 ACTACCACTTCGTATCAATCAAACA 58.539 36.000 0.00 0.00 0.00 2.83
1691 2937 3.004951 CTTGCCCTGGCTCCTCAT 58.995 61.111 9.97 0.00 42.51 2.90
1704 2950 4.021981 TGGCTCCTCATCTATACACGAATG 60.022 45.833 0.00 0.00 0.00 2.67
1738 2984 7.479980 TGATTGGTTGAGTTTACAAAGTTCAG 58.520 34.615 0.00 0.00 0.00 3.02
1840 3130 8.435187 TCAATACCTAGAGGAGTTTATCGAGTA 58.565 37.037 1.60 0.00 38.94 2.59
1918 3790 9.490379 GATTAACGGAAATGATAAGTACCTGAT 57.510 33.333 0.00 0.00 0.00 2.90
1919 3791 8.657074 TTAACGGAAATGATAAGTACCTGATG 57.343 34.615 0.00 0.00 0.00 3.07
1924 3796 7.500992 GGAAATGATAAGTACCTGATGTCAGA 58.499 38.462 11.47 0.00 46.59 3.27
1925 3797 7.655328 GGAAATGATAAGTACCTGATGTCAGAG 59.345 40.741 11.47 4.61 46.59 3.35
1927 3799 6.701145 TGATAAGTACCTGATGTCAGAGAC 57.299 41.667 11.47 8.46 46.59 3.36
1933 3805 1.134877 CCTGATGTCAGAGACGTGCAT 60.135 52.381 11.47 0.00 46.59 3.96
2004 3876 7.010923 TGTCAATTTTCTGGCAAACAACATAAC 59.989 33.333 0.00 0.00 0.00 1.89
2012 3884 0.594110 AAACAACATAACACGGGCGG 59.406 50.000 0.00 0.00 0.00 6.13
2027 3899 3.256620 GCGGAATTGCCATGCTTAC 57.743 52.632 0.00 0.00 35.94 2.34
2028 3900 0.249031 GCGGAATTGCCATGCTTACC 60.249 55.000 0.00 0.00 35.94 2.85
2029 3901 1.102154 CGGAATTGCCATGCTTACCA 58.898 50.000 0.00 0.00 35.94 3.25
2030 3902 1.476085 CGGAATTGCCATGCTTACCAA 59.524 47.619 0.00 0.00 35.94 3.67
2031 3903 2.735126 CGGAATTGCCATGCTTACCAAC 60.735 50.000 0.00 0.00 35.94 3.77
2032 3904 2.497273 GGAATTGCCATGCTTACCAACT 59.503 45.455 0.00 0.00 36.34 3.16
2033 3905 3.699038 GGAATTGCCATGCTTACCAACTA 59.301 43.478 0.00 0.00 36.34 2.24
2034 3906 4.159506 GGAATTGCCATGCTTACCAACTAA 59.840 41.667 0.00 0.00 36.34 2.24
2035 3907 5.337169 GGAATTGCCATGCTTACCAACTAAA 60.337 40.000 0.00 0.00 36.34 1.85
2036 3908 4.513198 TTGCCATGCTTACCAACTAAAC 57.487 40.909 0.00 0.00 0.00 2.01
2037 3909 3.761897 TGCCATGCTTACCAACTAAACT 58.238 40.909 0.00 0.00 0.00 2.66
2038 3910 4.148838 TGCCATGCTTACCAACTAAACTT 58.851 39.130 0.00 0.00 0.00 2.66
2039 3911 4.022416 TGCCATGCTTACCAACTAAACTTG 60.022 41.667 0.00 0.00 0.00 3.16
2040 3912 4.485163 CCATGCTTACCAACTAAACTTGC 58.515 43.478 0.00 0.00 0.00 4.01
2041 3913 4.485163 CATGCTTACCAACTAAACTTGCC 58.515 43.478 0.00 0.00 0.00 4.52
2042 3914 3.556999 TGCTTACCAACTAAACTTGCCA 58.443 40.909 0.00 0.00 0.00 4.92
2043 3915 4.148838 TGCTTACCAACTAAACTTGCCAT 58.851 39.130 0.00 0.00 0.00 4.40
2044 3916 4.217550 TGCTTACCAACTAAACTTGCCATC 59.782 41.667 0.00 0.00 0.00 3.51
2045 3917 4.380550 GCTTACCAACTAAACTTGCCATCC 60.381 45.833 0.00 0.00 0.00 3.51
2046 3918 3.525800 ACCAACTAAACTTGCCATCCT 57.474 42.857 0.00 0.00 0.00 3.24
2047 3919 3.844640 ACCAACTAAACTTGCCATCCTT 58.155 40.909 0.00 0.00 0.00 3.36
2048 3920 3.573967 ACCAACTAAACTTGCCATCCTTG 59.426 43.478 0.00 0.00 0.00 3.61
2049 3921 3.573967 CCAACTAAACTTGCCATCCTTGT 59.426 43.478 0.00 0.00 0.00 3.16
2050 3922 4.549458 CAACTAAACTTGCCATCCTTGTG 58.451 43.478 0.00 0.00 0.00 3.33
2051 3923 3.832527 ACTAAACTTGCCATCCTTGTGT 58.167 40.909 0.00 0.00 0.00 3.72
2052 3924 3.821033 ACTAAACTTGCCATCCTTGTGTC 59.179 43.478 0.00 0.00 0.00 3.67
2053 3925 2.363306 AACTTGCCATCCTTGTGTCA 57.637 45.000 0.00 0.00 0.00 3.58
2054 3926 2.363306 ACTTGCCATCCTTGTGTCAA 57.637 45.000 0.00 0.00 0.00 3.18
2055 3927 1.956477 ACTTGCCATCCTTGTGTCAAC 59.044 47.619 0.00 0.00 0.00 3.18
2056 3928 2.233271 CTTGCCATCCTTGTGTCAACT 58.767 47.619 0.00 0.00 0.00 3.16
2057 3929 2.363306 TGCCATCCTTGTGTCAACTT 57.637 45.000 0.00 0.00 0.00 2.66
2058 3930 3.500448 TGCCATCCTTGTGTCAACTTA 57.500 42.857 0.00 0.00 0.00 2.24
2059 3931 3.826524 TGCCATCCTTGTGTCAACTTAA 58.173 40.909 0.00 0.00 0.00 1.85
2060 3932 4.406456 TGCCATCCTTGTGTCAACTTAAT 58.594 39.130 0.00 0.00 0.00 1.40
2061 3933 4.458989 TGCCATCCTTGTGTCAACTTAATC 59.541 41.667 0.00 0.00 0.00 1.75
2062 3934 4.702131 GCCATCCTTGTGTCAACTTAATCT 59.298 41.667 0.00 0.00 0.00 2.40
2063 3935 5.183904 GCCATCCTTGTGTCAACTTAATCTT 59.816 40.000 0.00 0.00 0.00 2.40
2064 3936 6.615088 CCATCCTTGTGTCAACTTAATCTTG 58.385 40.000 0.00 0.00 0.00 3.02
2065 3937 5.689383 TCCTTGTGTCAACTTAATCTTGC 57.311 39.130 0.00 0.00 0.00 4.01
2066 3938 4.518970 TCCTTGTGTCAACTTAATCTTGCC 59.481 41.667 0.00 0.00 0.00 4.52
2067 3939 4.278170 CCTTGTGTCAACTTAATCTTGCCA 59.722 41.667 0.00 0.00 0.00 4.92
2068 3940 4.829064 TGTGTCAACTTAATCTTGCCAC 57.171 40.909 1.96 1.96 29.99 5.01
2069 3941 4.203226 TGTGTCAACTTAATCTTGCCACA 58.797 39.130 6.02 6.02 35.67 4.17
2070 3942 4.642437 TGTGTCAACTTAATCTTGCCACAA 59.358 37.500 7.18 0.00 35.24 3.33
2071 3943 5.126222 TGTGTCAACTTAATCTTGCCACAAA 59.874 36.000 7.18 0.00 35.24 2.83
2072 3944 6.039616 GTGTCAACTTAATCTTGCCACAAAA 58.960 36.000 3.53 0.00 29.80 2.44
2073 3945 6.533367 GTGTCAACTTAATCTTGCCACAAAAA 59.467 34.615 3.53 0.00 29.80 1.94
2091 3963 4.809815 AAAAATGTTCGTTTTGCCATGG 57.190 36.364 7.63 7.63 32.02 3.66
2092 3964 3.467374 AAATGTTCGTTTTGCCATGGT 57.533 38.095 14.67 0.00 0.00 3.55
2093 3965 2.723124 ATGTTCGTTTTGCCATGGTC 57.277 45.000 14.67 6.41 0.00 4.02
2094 3966 1.393603 TGTTCGTTTTGCCATGGTCA 58.606 45.000 14.67 9.23 0.00 4.02
2095 3967 1.066303 TGTTCGTTTTGCCATGGTCAC 59.934 47.619 14.67 4.25 0.00 3.67
2096 3968 0.671251 TTCGTTTTGCCATGGTCACC 59.329 50.000 14.67 0.00 0.00 4.02
2097 3969 0.179004 TCGTTTTGCCATGGTCACCT 60.179 50.000 14.67 0.00 0.00 4.00
2098 3970 1.072489 TCGTTTTGCCATGGTCACCTA 59.928 47.619 14.67 0.00 0.00 3.08
2099 3971 1.199097 CGTTTTGCCATGGTCACCTAC 59.801 52.381 14.67 8.51 0.00 3.18
2109 3981 2.268730 GGTCACCTACCTAACGTTCG 57.731 55.000 2.82 0.00 45.75 3.95
2110 3982 1.622232 GTCACCTACCTAACGTTCGC 58.378 55.000 2.82 0.00 0.00 4.70
2111 3983 1.200948 GTCACCTACCTAACGTTCGCT 59.799 52.381 2.82 0.00 0.00 4.93
2112 3984 2.420022 GTCACCTACCTAACGTTCGCTA 59.580 50.000 2.82 0.00 0.00 4.26
2113 3985 2.679837 TCACCTACCTAACGTTCGCTAG 59.320 50.000 2.82 0.00 0.00 3.42
2114 3986 2.421424 CACCTACCTAACGTTCGCTAGT 59.579 50.000 2.82 0.00 0.00 2.57
2115 3987 3.084786 ACCTACCTAACGTTCGCTAGTT 58.915 45.455 2.82 0.00 0.00 2.24
2116 3988 4.094887 CACCTACCTAACGTTCGCTAGTTA 59.905 45.833 2.82 0.00 0.00 2.24
2117 3989 4.884164 ACCTACCTAACGTTCGCTAGTTAT 59.116 41.667 2.82 0.00 33.09 1.89
2118 3990 5.008118 ACCTACCTAACGTTCGCTAGTTATC 59.992 44.000 2.82 0.00 33.09 1.75
2119 3991 3.945179 ACCTAACGTTCGCTAGTTATCG 58.055 45.455 2.82 0.00 33.09 2.92
2120 3992 3.623060 ACCTAACGTTCGCTAGTTATCGA 59.377 43.478 2.82 0.00 33.09 3.59
2121 3993 3.964970 CCTAACGTTCGCTAGTTATCGAC 59.035 47.826 2.82 0.00 34.16 4.20
2122 3994 2.082733 ACGTTCGCTAGTTATCGACG 57.917 50.000 0.00 0.00 36.30 5.12
2123 3995 1.394917 ACGTTCGCTAGTTATCGACGT 59.605 47.619 0.00 0.00 37.50 4.34
2124 3996 2.025583 CGTTCGCTAGTTATCGACGTC 58.974 52.381 5.18 5.18 34.16 4.34
2125 3997 2.370515 GTTCGCTAGTTATCGACGTCC 58.629 52.381 10.58 0.00 34.16 4.79
2126 3998 1.655484 TCGCTAGTTATCGACGTCCA 58.345 50.000 10.58 0.00 0.00 4.02
2127 3999 2.009051 TCGCTAGTTATCGACGTCCAA 58.991 47.619 10.58 0.00 0.00 3.53
2128 4000 2.031314 TCGCTAGTTATCGACGTCCAAG 59.969 50.000 10.58 0.00 0.00 3.61
2129 4001 2.031314 CGCTAGTTATCGACGTCCAAGA 59.969 50.000 10.58 1.59 0.00 3.02
2130 4002 3.303857 CGCTAGTTATCGACGTCCAAGAT 60.304 47.826 10.58 9.66 0.00 2.40
2131 4003 4.220572 GCTAGTTATCGACGTCCAAGATC 58.779 47.826 10.58 0.00 0.00 2.75
2132 4004 4.261072 GCTAGTTATCGACGTCCAAGATCA 60.261 45.833 10.58 0.00 0.00 2.92
2133 4005 4.713824 AGTTATCGACGTCCAAGATCAA 57.286 40.909 10.58 1.04 0.00 2.57
2134 4006 5.068234 AGTTATCGACGTCCAAGATCAAA 57.932 39.130 10.58 0.00 0.00 2.69
2135 4007 5.475719 AGTTATCGACGTCCAAGATCAAAA 58.524 37.500 10.58 0.00 0.00 2.44
2138 4010 3.659786 TCGACGTCCAAGATCAAAATGT 58.340 40.909 10.58 0.00 0.00 2.71
2145 4017 6.029607 CGTCCAAGATCAAAATGTGGTTATG 58.970 40.000 0.00 0.00 0.00 1.90
2146 4018 6.332630 GTCCAAGATCAAAATGTGGTTATGG 58.667 40.000 0.00 0.00 30.98 2.74
2153 4025 5.263599 TCAAAATGTGGTTATGGCTGATCT 58.736 37.500 0.00 0.00 0.00 2.75
2163 4035 0.681887 TGGCTGATCTGGCACAATGG 60.682 55.000 22.43 0.00 38.70 3.16
2173 4045 0.531657 GGCACAATGGCATTGCTACA 59.468 50.000 33.90 0.00 43.98 2.74
2200 4072 9.868277 AAAGATAATATGGAAAAATGCAAACGA 57.132 25.926 0.00 0.00 0.00 3.85
2205 4077 2.863137 TGGAAAAATGCAAACGAACTGC 59.137 40.909 0.00 0.00 40.35 4.40
2219 4091 4.127171 ACGAACTGCTGATTACACTTGTT 58.873 39.130 0.00 0.00 0.00 2.83
2237 4109 9.814899 ACACTTGTTGATTTTGTGATGAAAATA 57.185 25.926 0.00 0.00 36.00 1.40
2246 4118 9.577110 GATTTTGTGATGAAAATAAGAGCATCA 57.423 29.630 0.00 0.00 43.29 3.07
2292 4165 4.949238 TGCTGTTGTTTATATGTGGAGCAT 59.051 37.500 0.00 0.00 41.42 3.79
2293 4166 5.418524 TGCTGTTGTTTATATGTGGAGCATT 59.581 36.000 0.00 0.00 38.94 3.56
2354 4227 5.912528 GTGTTTTACACGATACTTCTGGTG 58.087 41.667 0.00 0.00 39.53 4.17
2355 4228 4.992319 TGTTTTACACGATACTTCTGGTGG 59.008 41.667 0.00 0.00 34.78 4.61
2356 4229 3.880047 TTACACGATACTTCTGGTGGG 57.120 47.619 0.00 0.00 34.78 4.61
2357 4230 0.249398 ACACGATACTTCTGGTGGGC 59.751 55.000 0.00 0.00 34.78 5.36
2372 4245 0.036732 TGGGCAGCGAAGAACATTCT 59.963 50.000 0.00 0.00 39.74 2.40
2376 4249 2.742053 GGCAGCGAAGAACATTCTGTTA 59.258 45.455 0.00 0.00 41.28 2.41
2381 4254 2.678336 CGAAGAACATTCTGTTAGGCCC 59.322 50.000 0.00 0.00 41.28 5.80
2387 4260 5.724854 AGAACATTCTGTTAGGCCCTAACTA 59.275 40.000 28.91 17.22 44.49 2.24
2395 4268 4.102524 TGTTAGGCCCTAACTATCATGTGG 59.897 45.833 28.91 0.00 44.49 4.17
2396 4269 2.776665 AGGCCCTAACTATCATGTGGT 58.223 47.619 0.00 0.00 0.00 4.16
2399 4272 2.487265 GCCCTAACTATCATGTGGTGGG 60.487 54.545 0.00 0.00 35.47 4.61
2400 4273 2.487265 CCCTAACTATCATGTGGTGGGC 60.487 54.545 0.00 0.00 0.00 5.36
2401 4274 2.172505 CCTAACTATCATGTGGTGGGCA 59.827 50.000 0.00 0.00 0.00 5.36
2407 4299 1.079681 CATGTGGTGGGCATTGTGC 60.080 57.895 0.00 0.00 44.08 4.57
2426 4318 3.063588 GTGCAAAACTCGTAATAGAGCCC 59.936 47.826 0.00 0.00 41.77 5.19
2427 4319 3.055385 TGCAAAACTCGTAATAGAGCCCT 60.055 43.478 0.00 0.00 41.77 5.19
2428 4320 3.309954 GCAAAACTCGTAATAGAGCCCTG 59.690 47.826 0.00 0.00 41.77 4.45
2429 4321 2.892784 AACTCGTAATAGAGCCCTGC 57.107 50.000 0.00 0.00 41.77 4.85
2468 4362 2.081955 AGCCCCTGTTGAGCTGATT 58.918 52.632 0.00 0.00 34.99 2.57
2478 4372 5.048504 CCTGTTGAGCTGATTTGTTACATGT 60.049 40.000 2.69 2.69 0.00 3.21
2480 4374 5.299028 TGTTGAGCTGATTTGTTACATGTGT 59.701 36.000 9.11 0.00 0.00 3.72
2481 4375 5.361135 TGAGCTGATTTGTTACATGTGTG 57.639 39.130 9.11 0.00 0.00 3.82
2499 4393 1.028905 TGCTTTCCTTCGTGTTTGGG 58.971 50.000 0.00 0.00 0.00 4.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.676342 GCCCAGTTATAAACAGGTCGTG 59.324 50.000 1.28 0.00 36.41 4.35
1 2 2.355412 GGCCCAGTTATAAACAGGTCGT 60.355 50.000 0.00 0.00 36.41 4.34
2 3 2.285977 GGCCCAGTTATAAACAGGTCG 58.714 52.381 0.00 0.00 36.41 4.79
3 4 2.285977 CGGCCCAGTTATAAACAGGTC 58.714 52.381 0.00 0.00 36.41 3.85
4 5 1.680860 GCGGCCCAGTTATAAACAGGT 60.681 52.381 0.00 0.00 36.41 4.00
5 6 1.021968 GCGGCCCAGTTATAAACAGG 58.978 55.000 0.00 0.00 37.76 4.00
6 7 1.021968 GGCGGCCCAGTTATAAACAG 58.978 55.000 8.12 0.00 0.00 3.16
7 8 0.745128 CGGCGGCCCAGTTATAAACA 60.745 55.000 14.55 0.00 0.00 2.83
8 9 2.019337 CGGCGGCCCAGTTATAAAC 58.981 57.895 14.55 0.00 0.00 2.01
9 10 1.820481 GCGGCGGCCCAGTTATAAA 60.820 57.895 14.55 0.00 0.00 1.40
10 11 2.203098 GCGGCGGCCCAGTTATAA 60.203 61.111 14.55 0.00 0.00 0.98
24 25 3.605749 ATGTCACGGTCCAAGGCGG 62.606 63.158 0.00 0.00 0.00 6.13
25 26 2.047274 ATGTCACGGTCCAAGGCG 60.047 61.111 0.00 0.00 0.00 5.52
26 27 2.690778 GCATGTCACGGTCCAAGGC 61.691 63.158 0.00 0.00 0.00 4.35
27 28 0.249120 TAGCATGTCACGGTCCAAGG 59.751 55.000 0.00 0.00 0.00 3.61
28 29 1.645034 CTAGCATGTCACGGTCCAAG 58.355 55.000 0.00 0.00 0.00 3.61
29 30 0.391130 GCTAGCATGTCACGGTCCAA 60.391 55.000 10.63 0.00 0.00 3.53
30 31 1.218047 GCTAGCATGTCACGGTCCA 59.782 57.895 10.63 0.00 0.00 4.02
31 32 0.807667 CTGCTAGCATGTCACGGTCC 60.808 60.000 19.72 0.00 0.00 4.46
32 33 0.807667 CCTGCTAGCATGTCACGGTC 60.808 60.000 19.72 0.00 0.00 4.79
33 34 1.219124 CCTGCTAGCATGTCACGGT 59.781 57.895 19.72 0.00 0.00 4.83
34 35 1.522355 CCCTGCTAGCATGTCACGG 60.522 63.158 19.72 14.48 0.00 4.94
35 36 0.391661 AACCCTGCTAGCATGTCACG 60.392 55.000 19.72 5.05 0.00 4.35
36 37 2.691409 TAACCCTGCTAGCATGTCAC 57.309 50.000 19.72 0.00 0.00 3.67
37 38 2.092968 CCTTAACCCTGCTAGCATGTCA 60.093 50.000 19.72 1.71 0.00 3.58
38 39 2.565841 CCTTAACCCTGCTAGCATGTC 58.434 52.381 19.72 0.00 0.00 3.06
39 40 1.212935 CCCTTAACCCTGCTAGCATGT 59.787 52.381 19.72 15.67 0.00 3.21
40 41 1.477558 CCCCTTAACCCTGCTAGCATG 60.478 57.143 19.72 15.78 0.00 4.06
41 42 0.846693 CCCCTTAACCCTGCTAGCAT 59.153 55.000 19.72 5.75 0.00 3.79
42 43 1.921869 GCCCCTTAACCCTGCTAGCA 61.922 60.000 18.22 18.22 0.00 3.49
43 44 1.152943 GCCCCTTAACCCTGCTAGC 60.153 63.158 8.10 8.10 0.00 3.42
44 45 1.532238 GGCCCCTTAACCCTGCTAG 59.468 63.158 0.00 0.00 0.00 3.42
45 46 2.004693 GGGCCCCTTAACCCTGCTA 61.005 63.158 12.23 0.00 43.36 3.49
46 47 3.347590 GGGCCCCTTAACCCTGCT 61.348 66.667 12.23 0.00 43.36 4.24
50 51 4.458829 GGCAGGGCCCCTTAACCC 62.459 72.222 21.43 6.17 44.06 4.11
70 71 1.747774 CCAAACCTGGCCAAGTTGG 59.252 57.895 20.39 20.90 41.55 3.77
80 81 1.901464 CCCCGGTCAACCAAACCTG 60.901 63.158 0.00 0.00 34.45 4.00
81 82 2.518933 CCCCGGTCAACCAAACCT 59.481 61.111 0.00 0.00 34.45 3.50
82 83 2.599281 CCCCCGGTCAACCAAACC 60.599 66.667 0.00 0.00 35.14 3.27
83 84 1.152715 TTCCCCCGGTCAACCAAAC 60.153 57.895 0.00 0.00 35.14 2.93
84 85 1.151908 CTTCCCCCGGTCAACCAAA 59.848 57.895 0.00 0.00 35.14 3.28
85 86 1.770927 TCTTCCCCCGGTCAACCAA 60.771 57.895 0.00 0.00 35.14 3.67
86 87 2.122324 TCTTCCCCCGGTCAACCA 60.122 61.111 0.00 0.00 35.14 3.67
87 88 1.775934 AAGTCTTCCCCCGGTCAACC 61.776 60.000 0.00 0.00 0.00 3.77
88 89 0.605589 CAAGTCTTCCCCCGGTCAAC 60.606 60.000 0.00 0.00 0.00 3.18
89 90 1.057851 ACAAGTCTTCCCCCGGTCAA 61.058 55.000 0.00 0.00 0.00 3.18
90 91 0.178926 TACAAGTCTTCCCCCGGTCA 60.179 55.000 0.00 0.00 0.00 4.02
91 92 1.134491 CATACAAGTCTTCCCCCGGTC 60.134 57.143 0.00 0.00 0.00 4.79
92 93 0.909623 CATACAAGTCTTCCCCCGGT 59.090 55.000 0.00 0.00 0.00 5.28
93 94 1.139058 CTCATACAAGTCTTCCCCCGG 59.861 57.143 0.00 0.00 0.00 5.73
94 95 2.108168 TCTCATACAAGTCTTCCCCCG 58.892 52.381 0.00 0.00 0.00 5.73
95 96 3.970640 AGATCTCATACAAGTCTTCCCCC 59.029 47.826 0.00 0.00 0.00 5.40
128 129 7.687941 TTTTTAGGGTTGATCTCACAATCTC 57.312 36.000 0.00 0.00 32.25 2.75
133 134 9.699410 ATATGAATTTTTAGGGTTGATCTCACA 57.301 29.630 0.00 0.00 0.00 3.58
191 192 4.415596 ACATACCCCACATGAATGTTGTT 58.584 39.130 0.00 0.00 39.39 2.83
198 199 4.534500 AGTTGTAGACATACCCCACATGAA 59.466 41.667 0.00 0.00 0.00 2.57
199 200 4.101114 AGTTGTAGACATACCCCACATGA 58.899 43.478 0.00 0.00 0.00 3.07
231 232 8.607459 CAAATATACTTCGAGTTTTGAGCTGAT 58.393 33.333 0.00 0.00 29.46 2.90
321 1154 6.365970 AAGACAAGACTGGACATGAATAGT 57.634 37.500 0.00 0.00 0.00 2.12
349 1587 7.732222 TTCAAACAGGGCCATTAATAGAAAT 57.268 32.000 6.18 0.00 0.00 2.17
362 1600 0.826062 CCCCATGATTCAAACAGGGC 59.174 55.000 0.00 0.00 37.79 5.19
363 1601 2.236489 ACCCCATGATTCAAACAGGG 57.764 50.000 10.50 10.50 38.67 4.45
364 1602 4.599041 TCTAACCCCATGATTCAAACAGG 58.401 43.478 0.00 0.00 0.00 4.00
365 1603 4.096984 GCTCTAACCCCATGATTCAAACAG 59.903 45.833 0.00 0.00 0.00 3.16
366 1604 4.016444 GCTCTAACCCCATGATTCAAACA 58.984 43.478 0.00 0.00 0.00 2.83
367 1605 4.273318 AGCTCTAACCCCATGATTCAAAC 58.727 43.478 0.00 0.00 0.00 2.93
368 1606 4.591321 AGCTCTAACCCCATGATTCAAA 57.409 40.909 0.00 0.00 0.00 2.69
369 1607 4.721776 ACTAGCTCTAACCCCATGATTCAA 59.278 41.667 0.00 0.00 0.00 2.69
370 1608 4.298626 ACTAGCTCTAACCCCATGATTCA 58.701 43.478 0.00 0.00 0.00 2.57
371 1609 4.965200 ACTAGCTCTAACCCCATGATTC 57.035 45.455 0.00 0.00 0.00 2.52
372 1610 5.440610 CAAACTAGCTCTAACCCCATGATT 58.559 41.667 0.00 0.00 0.00 2.57
373 1611 4.141390 CCAAACTAGCTCTAACCCCATGAT 60.141 45.833 0.00 0.00 0.00 2.45
374 1612 3.199946 CCAAACTAGCTCTAACCCCATGA 59.800 47.826 0.00 0.00 0.00 3.07
375 1613 3.545703 CCAAACTAGCTCTAACCCCATG 58.454 50.000 0.00 0.00 0.00 3.66
376 1614 2.509964 CCCAAACTAGCTCTAACCCCAT 59.490 50.000 0.00 0.00 0.00 4.00
377 1615 1.913419 CCCAAACTAGCTCTAACCCCA 59.087 52.381 0.00 0.00 0.00 4.96
378 1616 1.914108 ACCCAAACTAGCTCTAACCCC 59.086 52.381 0.00 0.00 0.00 4.95
379 1617 3.715638 AACCCAAACTAGCTCTAACCC 57.284 47.619 0.00 0.00 0.00 4.11
380 1618 5.417754 ACTAACCCAAACTAGCTCTAACC 57.582 43.478 0.00 0.00 0.00 2.85
381 1619 5.642491 CCAACTAACCCAAACTAGCTCTAAC 59.358 44.000 0.00 0.00 0.00 2.34
382 1620 5.544948 TCCAACTAACCCAAACTAGCTCTAA 59.455 40.000 0.00 0.00 0.00 2.10
383 1621 5.088730 TCCAACTAACCCAAACTAGCTCTA 58.911 41.667 0.00 0.00 0.00 2.43
384 1622 3.908103 TCCAACTAACCCAAACTAGCTCT 59.092 43.478 0.00 0.00 0.00 4.09
385 1623 4.254492 CTCCAACTAACCCAAACTAGCTC 58.746 47.826 0.00 0.00 0.00 4.09
386 1624 3.009143 CCTCCAACTAACCCAAACTAGCT 59.991 47.826 0.00 0.00 0.00 3.32
387 1625 3.344515 CCTCCAACTAACCCAAACTAGC 58.655 50.000 0.00 0.00 0.00 3.42
388 1626 3.009143 AGCCTCCAACTAACCCAAACTAG 59.991 47.826 0.00 0.00 0.00 2.57
389 1627 2.983898 AGCCTCCAACTAACCCAAACTA 59.016 45.455 0.00 0.00 0.00 2.24
390 1628 1.780919 AGCCTCCAACTAACCCAAACT 59.219 47.619 0.00 0.00 0.00 2.66
391 1629 2.287977 AGCCTCCAACTAACCCAAAC 57.712 50.000 0.00 0.00 0.00 2.93
392 1630 4.456662 TTAAGCCTCCAACTAACCCAAA 57.543 40.909 0.00 0.00 0.00 3.28
393 1631 4.456662 TTTAAGCCTCCAACTAACCCAA 57.543 40.909 0.00 0.00 0.00 4.12
394 1632 4.668138 ATTTAAGCCTCCAACTAACCCA 57.332 40.909 0.00 0.00 0.00 4.51
395 1633 5.359009 GGTTATTTAAGCCTCCAACTAACCC 59.641 44.000 6.88 0.00 35.49 4.11
396 1634 6.446781 GGTTATTTAAGCCTCCAACTAACC 57.553 41.667 0.00 0.00 34.68 2.85
405 1643 7.340999 TGGATACTTTTGGGTTATTTAAGCCTC 59.659 37.037 16.98 6.63 45.22 4.70
406 1644 7.186268 TGGATACTTTTGGGTTATTTAAGCCT 58.814 34.615 16.98 2.38 45.22 4.58
407 1645 7.412853 TGGATACTTTTGGGTTATTTAAGCC 57.587 36.000 10.86 10.86 45.22 4.35
408 1646 9.146984 GTTTGGATACTTTTGGGTTATTTAAGC 57.853 33.333 0.00 0.00 37.61 3.09
411 1649 8.808092 CCTGTTTGGATACTTTTGGGTTATTTA 58.192 33.333 0.00 0.00 38.35 1.40
412 1650 7.291416 ACCTGTTTGGATACTTTTGGGTTATTT 59.709 33.333 0.00 0.00 39.71 1.40
413 1651 6.785466 ACCTGTTTGGATACTTTTGGGTTATT 59.215 34.615 0.00 0.00 39.71 1.40
414 1652 6.319715 ACCTGTTTGGATACTTTTGGGTTAT 58.680 36.000 0.00 0.00 39.71 1.89
415 1653 5.707495 ACCTGTTTGGATACTTTTGGGTTA 58.293 37.500 0.00 0.00 39.71 2.85
416 1654 4.552674 ACCTGTTTGGATACTTTTGGGTT 58.447 39.130 0.00 0.00 39.71 4.11
417 1655 4.193240 ACCTGTTTGGATACTTTTGGGT 57.807 40.909 0.00 0.00 39.71 4.51
418 1656 4.705023 CCTACCTGTTTGGATACTTTTGGG 59.295 45.833 0.00 0.00 39.71 4.12
419 1657 4.705023 CCCTACCTGTTTGGATACTTTTGG 59.295 45.833 0.00 0.00 39.71 3.28
420 1658 5.321927 ACCCTACCTGTTTGGATACTTTTG 58.678 41.667 0.00 0.00 39.71 2.44
421 1659 5.594199 ACCCTACCTGTTTGGATACTTTT 57.406 39.130 0.00 0.00 39.71 2.27
422 1660 5.594199 AACCCTACCTGTTTGGATACTTT 57.406 39.130 0.00 0.00 39.71 2.66
423 1661 6.027482 TCTAACCCTACCTGTTTGGATACTT 58.973 40.000 0.00 0.00 39.71 2.24
424 1662 5.596763 TCTAACCCTACCTGTTTGGATACT 58.403 41.667 0.00 0.00 39.71 2.12
425 1663 5.424573 ACTCTAACCCTACCTGTTTGGATAC 59.575 44.000 0.00 0.00 39.71 2.24
426 1664 5.424252 CACTCTAACCCTACCTGTTTGGATA 59.576 44.000 0.00 0.00 39.71 2.59
427 1665 4.225267 CACTCTAACCCTACCTGTTTGGAT 59.775 45.833 0.00 0.00 39.71 3.41
428 1666 3.581332 CACTCTAACCCTACCTGTTTGGA 59.419 47.826 0.00 0.00 39.71 3.53
429 1667 3.307480 CCACTCTAACCCTACCTGTTTGG 60.307 52.174 0.00 0.00 42.93 3.28
430 1668 3.307480 CCCACTCTAACCCTACCTGTTTG 60.307 52.174 0.00 0.00 0.00 2.93
431 1669 2.910977 CCCACTCTAACCCTACCTGTTT 59.089 50.000 0.00 0.00 0.00 2.83
432 1670 2.158050 ACCCACTCTAACCCTACCTGTT 60.158 50.000 0.00 0.00 0.00 3.16
433 1671 1.435959 ACCCACTCTAACCCTACCTGT 59.564 52.381 0.00 0.00 0.00 4.00
434 1672 2.249309 ACCCACTCTAACCCTACCTG 57.751 55.000 0.00 0.00 0.00 4.00
435 1673 3.339130 ACTAACCCACTCTAACCCTACCT 59.661 47.826 0.00 0.00 0.00 3.08
436 1674 3.717576 ACTAACCCACTCTAACCCTACC 58.282 50.000 0.00 0.00 0.00 3.18
437 1675 4.161189 GGAACTAACCCACTCTAACCCTAC 59.839 50.000 0.00 0.00 0.00 3.18
438 1676 4.202814 TGGAACTAACCCACTCTAACCCTA 60.203 45.833 0.00 0.00 0.00 3.53
439 1677 3.179685 GGAACTAACCCACTCTAACCCT 58.820 50.000 0.00 0.00 0.00 4.34
440 1678 2.908351 TGGAACTAACCCACTCTAACCC 59.092 50.000 0.00 0.00 0.00 4.11
441 1679 4.470304 AGATGGAACTAACCCACTCTAACC 59.530 45.833 0.00 0.00 36.36 2.85
442 1680 5.678955 AGATGGAACTAACCCACTCTAAC 57.321 43.478 0.00 0.00 36.36 2.34
443 1681 7.179076 GTTAGATGGAACTAACCCACTCTAA 57.821 40.000 0.00 0.00 43.43 2.10
444 1682 6.786967 GTTAGATGGAACTAACCCACTCTA 57.213 41.667 0.00 0.00 43.43 2.43
445 1683 5.678955 GTTAGATGGAACTAACCCACTCT 57.321 43.478 0.00 0.00 43.43 3.24
452 1690 6.990939 GGATAGTTGGGTTAGATGGAACTAAC 59.009 42.308 0.00 0.00 46.41 2.34
453 1691 6.100714 GGGATAGTTGGGTTAGATGGAACTAA 59.899 42.308 0.00 0.00 33.90 2.24
454 1692 5.605488 GGGATAGTTGGGTTAGATGGAACTA 59.395 44.000 0.00 0.00 34.51 2.24
455 1693 4.412528 GGGATAGTTGGGTTAGATGGAACT 59.587 45.833 0.00 0.00 0.00 3.01
456 1694 4.715713 GGGATAGTTGGGTTAGATGGAAC 58.284 47.826 0.00 0.00 0.00 3.62
457 1695 3.389983 CGGGATAGTTGGGTTAGATGGAA 59.610 47.826 0.00 0.00 0.00 3.53
458 1696 2.969950 CGGGATAGTTGGGTTAGATGGA 59.030 50.000 0.00 0.00 0.00 3.41
459 1697 2.038557 CCGGGATAGTTGGGTTAGATGG 59.961 54.545 0.00 0.00 0.00 3.51
460 1698 2.704065 ACCGGGATAGTTGGGTTAGATG 59.296 50.000 6.32 0.00 0.00 2.90
461 1699 2.704065 CACCGGGATAGTTGGGTTAGAT 59.296 50.000 6.32 0.00 0.00 1.98
462 1700 2.112998 CACCGGGATAGTTGGGTTAGA 58.887 52.381 6.32 0.00 0.00 2.10
463 1701 1.140252 CCACCGGGATAGTTGGGTTAG 59.860 57.143 6.32 0.00 35.59 2.34
464 1702 1.205966 CCACCGGGATAGTTGGGTTA 58.794 55.000 6.32 0.00 35.59 2.85
465 1703 0.548197 TCCACCGGGATAGTTGGGTT 60.548 55.000 6.32 0.00 38.64 4.11
466 1704 0.981277 CTCCACCGGGATAGTTGGGT 60.981 60.000 6.32 0.00 43.91 4.51
467 1705 0.689745 TCTCCACCGGGATAGTTGGG 60.690 60.000 6.32 0.00 43.91 4.12
468 1706 0.753262 CTCTCCACCGGGATAGTTGG 59.247 60.000 6.32 2.68 43.91 3.77
469 1707 0.753262 CCTCTCCACCGGGATAGTTG 59.247 60.000 6.32 0.00 43.91 3.16
470 1708 0.338814 ACCTCTCCACCGGGATAGTT 59.661 55.000 6.32 0.00 43.91 2.24
471 1709 0.397254 CACCTCTCCACCGGGATAGT 60.397 60.000 6.32 0.00 43.91 2.12
472 1710 1.749334 GCACCTCTCCACCGGGATAG 61.749 65.000 6.32 0.00 43.91 2.08
473 1711 1.760875 GCACCTCTCCACCGGGATA 60.761 63.158 6.32 0.00 43.91 2.59
474 1712 3.083997 GCACCTCTCCACCGGGAT 61.084 66.667 6.32 0.00 43.91 3.85
475 1713 2.449967 TAAGCACCTCTCCACCGGGA 62.450 60.000 6.32 0.00 42.29 5.14
476 1714 1.338136 ATAAGCACCTCTCCACCGGG 61.338 60.000 6.32 0.00 0.00 5.73
477 1715 0.541863 AATAAGCACCTCTCCACCGG 59.458 55.000 0.00 0.00 0.00 5.28
478 1716 2.009774 CAAATAAGCACCTCTCCACCG 58.990 52.381 0.00 0.00 0.00 4.94
479 1717 3.274288 CTCAAATAAGCACCTCTCCACC 58.726 50.000 0.00 0.00 0.00 4.61
480 1718 3.944087 ACTCAAATAAGCACCTCTCCAC 58.056 45.455 0.00 0.00 0.00 4.02
481 1719 4.640771 AACTCAAATAAGCACCTCTCCA 57.359 40.909 0.00 0.00 0.00 3.86
482 1720 5.978814 TCTAACTCAAATAAGCACCTCTCC 58.021 41.667 0.00 0.00 0.00 3.71
483 1721 6.533367 CACTCTAACTCAAATAAGCACCTCTC 59.467 42.308 0.00 0.00 0.00 3.20
484 1722 6.402222 CACTCTAACTCAAATAAGCACCTCT 58.598 40.000 0.00 0.00 0.00 3.69
485 1723 5.582665 CCACTCTAACTCAAATAAGCACCTC 59.417 44.000 0.00 0.00 0.00 3.85
486 1724 5.491982 CCACTCTAACTCAAATAAGCACCT 58.508 41.667 0.00 0.00 0.00 4.00
487 1725 4.636206 CCCACTCTAACTCAAATAAGCACC 59.364 45.833 0.00 0.00 0.00 5.01
488 1726 5.246307 ACCCACTCTAACTCAAATAAGCAC 58.754 41.667 0.00 0.00 0.00 4.40
489 1727 5.499004 ACCCACTCTAACTCAAATAAGCA 57.501 39.130 0.00 0.00 0.00 3.91
490 1728 7.328737 TCTAACCCACTCTAACTCAAATAAGC 58.671 38.462 0.00 0.00 0.00 3.09
491 1729 9.720769 TTTCTAACCCACTCTAACTCAAATAAG 57.279 33.333 0.00 0.00 0.00 1.73
496 1734 9.498176 GTTATTTTCTAACCCACTCTAACTCAA 57.502 33.333 0.00 0.00 0.00 3.02
497 1735 8.877195 AGTTATTTTCTAACCCACTCTAACTCA 58.123 33.333 0.00 0.00 0.00 3.41
498 1736 9.368674 GAGTTATTTTCTAACCCACTCTAACTC 57.631 37.037 0.00 0.00 36.86 3.01
499 1737 9.102453 AGAGTTATTTTCTAACCCACTCTAACT 57.898 33.333 0.00 0.00 38.16 2.24
529 1767 8.185506 TGTTTGGATACTCTAACACAGTTAGA 57.814 34.615 16.22 16.22 31.46 2.10
530 1768 7.545965 CCTGTTTGGATACTCTAACACAGTTAG 59.454 40.741 9.97 9.97 38.35 2.34
531 1769 7.383687 CCTGTTTGGATACTCTAACACAGTTA 58.616 38.462 0.00 0.00 38.35 2.24
532 1770 6.231211 CCTGTTTGGATACTCTAACACAGTT 58.769 40.000 0.00 0.00 38.35 3.16
533 1771 5.280011 CCCTGTTTGGATACTCTAACACAGT 60.280 44.000 0.00 0.00 38.35 3.55
534 1772 5.178797 CCCTGTTTGGATACTCTAACACAG 58.821 45.833 0.00 0.00 38.35 3.66
535 1773 4.564821 GCCCTGTTTGGATACTCTAACACA 60.565 45.833 0.00 0.00 38.35 3.72
536 1774 3.939592 GCCCTGTTTGGATACTCTAACAC 59.060 47.826 0.00 0.00 38.35 3.32
537 1775 3.054655 GGCCCTGTTTGGATACTCTAACA 60.055 47.826 0.00 0.00 38.35 2.41
538 1776 3.054655 TGGCCCTGTTTGGATACTCTAAC 60.055 47.826 0.00 0.00 38.35 2.34
539 1777 3.186283 TGGCCCTGTTTGGATACTCTAA 58.814 45.455 0.00 0.00 38.35 2.10
540 1778 2.840511 TGGCCCTGTTTGGATACTCTA 58.159 47.619 0.00 0.00 38.35 2.43
541 1779 1.668826 TGGCCCTGTTTGGATACTCT 58.331 50.000 0.00 0.00 38.35 3.24
542 1780 2.507407 TTGGCCCTGTTTGGATACTC 57.493 50.000 0.00 0.00 38.35 2.59
543 1781 2.042979 ACATTGGCCCTGTTTGGATACT 59.957 45.455 0.00 0.00 38.35 2.12
544 1782 2.456577 ACATTGGCCCTGTTTGGATAC 58.543 47.619 0.00 0.00 38.35 2.24
545 1783 2.917713 ACATTGGCCCTGTTTGGATA 57.082 45.000 0.00 0.00 38.35 2.59
546 1784 2.624029 CCTACATTGGCCCTGTTTGGAT 60.624 50.000 12.78 0.00 38.35 3.41
547 1785 1.272425 CCTACATTGGCCCTGTTTGGA 60.272 52.381 12.78 0.00 38.35 3.53
548 1786 1.185315 CCTACATTGGCCCTGTTTGG 58.815 55.000 12.78 11.50 0.00 3.28
549 1787 1.923356 ACCTACATTGGCCCTGTTTG 58.077 50.000 12.78 7.63 0.00 2.93
550 1788 2.158385 TCAACCTACATTGGCCCTGTTT 60.158 45.455 12.78 0.16 0.00 2.83
551 1789 1.427368 TCAACCTACATTGGCCCTGTT 59.573 47.619 12.78 0.00 0.00 3.16
552 1790 1.072266 TCAACCTACATTGGCCCTGT 58.928 50.000 12.25 12.25 0.00 4.00
553 1791 2.214376 TTCAACCTACATTGGCCCTG 57.786 50.000 0.00 0.00 0.00 4.45
554 1792 3.473113 AATTCAACCTACATTGGCCCT 57.527 42.857 0.00 0.00 0.00 5.19
555 1793 3.636764 CCTAATTCAACCTACATTGGCCC 59.363 47.826 0.00 0.00 0.00 5.80
556 1794 4.532834 TCCTAATTCAACCTACATTGGCC 58.467 43.478 0.00 0.00 0.00 5.36
557 1795 5.193679 ACTCCTAATTCAACCTACATTGGC 58.806 41.667 0.00 0.00 0.00 4.52
558 1796 6.884295 TCAACTCCTAATTCAACCTACATTGG 59.116 38.462 0.00 0.00 0.00 3.16
559 1797 7.921786 TCAACTCCTAATTCAACCTACATTG 57.078 36.000 0.00 0.00 0.00 2.82
560 1798 8.793592 GTTTCAACTCCTAATTCAACCTACATT 58.206 33.333 0.00 0.00 0.00 2.71
561 1799 8.164070 AGTTTCAACTCCTAATTCAACCTACAT 58.836 33.333 0.00 0.00 32.86 2.29
562 1800 7.514721 AGTTTCAACTCCTAATTCAACCTACA 58.485 34.615 0.00 0.00 32.86 2.74
563 1801 7.981102 AGTTTCAACTCCTAATTCAACCTAC 57.019 36.000 0.00 0.00 32.86 3.18
566 1804 8.942338 AAAAAGTTTCAACTCCTAATTCAACC 57.058 30.769 0.00 0.00 38.57 3.77
580 1818 9.712305 TTGATGTTCAACCTTAAAAAGTTTCAA 57.288 25.926 0.00 0.00 30.26 2.69
630 1868 9.878599 AATCTACACGTTCAAACATTCTTAAAG 57.121 29.630 0.00 0.00 0.00 1.85
683 1922 1.067821 GAGGGTCTCACATTAGGCGAG 59.932 57.143 0.00 0.00 0.00 5.03
686 1925 1.414550 GGAGAGGGTCTCACATTAGGC 59.585 57.143 6.29 0.00 45.12 3.93
710 1949 4.717313 GTCAACCAGGGGGCCGTC 62.717 72.222 0.00 0.00 37.90 4.79
735 1974 0.899717 TGTTTTGGGGAGCATCTGGC 60.900 55.000 0.00 0.00 45.30 4.85
736 1975 0.890683 GTGTTTTGGGGAGCATCTGG 59.109 55.000 0.00 0.00 33.73 3.86
737 1976 0.890683 GGTGTTTTGGGGAGCATCTG 59.109 55.000 0.00 0.00 33.73 2.90
738 1977 0.779997 AGGTGTTTTGGGGAGCATCT 59.220 50.000 0.00 0.00 33.73 2.90
739 1978 1.546029 GAAGGTGTTTTGGGGAGCATC 59.454 52.381 0.00 0.00 0.00 3.91
740 1979 1.632589 GAAGGTGTTTTGGGGAGCAT 58.367 50.000 0.00 0.00 0.00 3.79
741 1980 0.469144 GGAAGGTGTTTTGGGGAGCA 60.469 55.000 0.00 0.00 0.00 4.26
742 1981 1.185618 GGGAAGGTGTTTTGGGGAGC 61.186 60.000 0.00 0.00 0.00 4.70
743 1982 0.893727 CGGGAAGGTGTTTTGGGGAG 60.894 60.000 0.00 0.00 0.00 4.30
744 1983 1.151908 CGGGAAGGTGTTTTGGGGA 59.848 57.895 0.00 0.00 0.00 4.81
745 1984 1.152631 ACGGGAAGGTGTTTTGGGG 60.153 57.895 0.00 0.00 0.00 4.96
746 1985 0.466555 TCACGGGAAGGTGTTTTGGG 60.467 55.000 0.00 0.00 39.00 4.12
747 1986 0.666374 GTCACGGGAAGGTGTTTTGG 59.334 55.000 0.00 0.00 39.00 3.28
748 1987 1.384525 TGTCACGGGAAGGTGTTTTG 58.615 50.000 0.00 0.00 39.00 2.44
749 1988 2.131776 TTGTCACGGGAAGGTGTTTT 57.868 45.000 0.00 0.00 39.00 2.43
750 1989 2.131776 TTTGTCACGGGAAGGTGTTT 57.868 45.000 0.00 0.00 39.00 2.83
751 1990 2.131776 TTTTGTCACGGGAAGGTGTT 57.868 45.000 0.00 0.00 39.00 3.32
752 1991 2.131776 TTTTTGTCACGGGAAGGTGT 57.868 45.000 0.00 0.00 39.00 4.16
768 2007 3.336138 TTTTGCCACGGAAAGGTTTTT 57.664 38.095 0.00 0.00 0.00 1.94
769 2008 3.552132 ATTTTGCCACGGAAAGGTTTT 57.448 38.095 0.00 0.00 0.00 2.43
770 2009 3.552132 AATTTTGCCACGGAAAGGTTT 57.448 38.095 0.00 0.00 0.00 3.27
771 2010 3.639561 AGTAATTTTGCCACGGAAAGGTT 59.360 39.130 0.00 0.00 0.00 3.50
772 2011 3.227614 AGTAATTTTGCCACGGAAAGGT 58.772 40.909 0.00 0.00 0.00 3.50
773 2012 3.366985 GGAGTAATTTTGCCACGGAAAGG 60.367 47.826 0.00 0.00 0.00 3.11
774 2013 3.366985 GGGAGTAATTTTGCCACGGAAAG 60.367 47.826 0.00 0.00 0.00 2.62
775 2014 2.559231 GGGAGTAATTTTGCCACGGAAA 59.441 45.455 0.00 0.00 0.00 3.13
776 2015 2.164338 GGGAGTAATTTTGCCACGGAA 58.836 47.619 0.00 0.00 0.00 4.30
777 2016 1.614850 GGGGAGTAATTTTGCCACGGA 60.615 52.381 3.28 0.00 0.00 4.69
778 2017 0.815095 GGGGAGTAATTTTGCCACGG 59.185 55.000 3.28 0.00 0.00 4.94
779 2018 0.815095 GGGGGAGTAATTTTGCCACG 59.185 55.000 3.28 0.00 0.00 4.94
780 2019 2.100197 GAGGGGGAGTAATTTTGCCAC 58.900 52.381 3.28 0.00 0.00 5.01
781 2020 1.006639 GGAGGGGGAGTAATTTTGCCA 59.993 52.381 3.28 0.00 0.00 4.92
782 2021 1.288037 AGGAGGGGGAGTAATTTTGCC 59.712 52.381 0.00 0.00 0.00 4.52
783 2022 2.242452 AGAGGAGGGGGAGTAATTTTGC 59.758 50.000 0.00 0.00 0.00 3.68
784 2023 3.432326 CGAGAGGAGGGGGAGTAATTTTG 60.432 52.174 0.00 0.00 0.00 2.44
785 2024 2.772515 CGAGAGGAGGGGGAGTAATTTT 59.227 50.000 0.00 0.00 0.00 1.82
786 2025 2.292984 ACGAGAGGAGGGGGAGTAATTT 60.293 50.000 0.00 0.00 0.00 1.82
787 2026 1.291335 ACGAGAGGAGGGGGAGTAATT 59.709 52.381 0.00 0.00 0.00 1.40
788 2027 0.935194 ACGAGAGGAGGGGGAGTAAT 59.065 55.000 0.00 0.00 0.00 1.89
789 2028 0.258194 GACGAGAGGAGGGGGAGTAA 59.742 60.000 0.00 0.00 0.00 2.24
882 2121 4.495422 CGAATCAATCTACCTATTCCGGG 58.505 47.826 0.00 0.00 0.00 5.73
890 2129 0.102481 ACGCGCGAATCAATCTACCT 59.898 50.000 39.36 5.70 0.00 3.08
907 2146 1.227380 GTGGCCTGGATCTAGCACG 60.227 63.158 3.32 0.00 0.00 5.34
924 2163 0.109086 CAGCCTCTTGATGACGACGT 60.109 55.000 0.00 0.00 0.00 4.34
929 2168 2.233431 AGACAGTCAGCCTCTTGATGAC 59.767 50.000 2.66 2.55 42.91 3.06
937 2176 2.861364 TCGAGAGACAGTCAGCCTC 58.139 57.895 2.66 5.57 33.31 4.70
957 2196 3.253220 TCTGCCCTTTCAAACCCTACTA 58.747 45.455 0.00 0.00 0.00 1.82
958 2197 2.040412 CTCTGCCCTTTCAAACCCTACT 59.960 50.000 0.00 0.00 0.00 2.57
959 2198 2.437413 CTCTGCCCTTTCAAACCCTAC 58.563 52.381 0.00 0.00 0.00 3.18
975 2214 2.553765 AATCTGCCCCTGCTGCTCTG 62.554 60.000 0.00 0.00 38.71 3.35
988 2227 2.262211 GTTTTCCATTGCCGAATCTGC 58.738 47.619 0.00 0.00 0.00 4.26
1050 2290 0.526211 GAATTTCGGTCCACAAGGCC 59.474 55.000 0.00 0.00 33.74 5.19
1091 2331 0.387202 CTCCTCGTGCCTCAGTATGG 59.613 60.000 0.00 0.00 36.16 2.74
1296 2536 2.097038 CGTCCTCAGCTTCTTGCCG 61.097 63.158 0.00 0.00 44.23 5.69
1313 2553 1.450312 GAGTGGGAACAGGGCATCG 60.450 63.158 0.00 0.00 44.46 3.84
1394 2634 2.122813 ACCTAGGGGGCATCTCGG 60.123 66.667 14.81 0.00 39.10 4.63
1407 2647 3.434319 GACACGTCGGCGGACCTA 61.434 66.667 16.39 0.00 43.45 3.08
1444 2690 4.204799 TCAGATGTAGTAGCGGCTTTCTA 58.795 43.478 8.26 9.03 0.00 2.10
1521 2767 2.337879 AAACAGGGACGGCTGCAAGA 62.338 55.000 0.50 0.00 34.07 3.02
1548 2794 6.267699 TGTGACCGGTAATCAGATATTCAGAT 59.732 38.462 7.34 0.00 0.00 2.90
1618 2864 8.089597 TGTTTGATTGATACGAAGTGGTAGTTA 58.910 33.333 0.00 0.00 45.73 2.24
1633 2879 7.959658 TCCACCATTAGAATGTTTGATTGAT 57.040 32.000 1.78 0.00 34.60 2.57
1634 2880 7.773489 TTCCACCATTAGAATGTTTGATTGA 57.227 32.000 1.78 0.00 34.60 2.57
1635 2881 7.871973 TGTTTCCACCATTAGAATGTTTGATTG 59.128 33.333 1.78 0.00 34.60 2.67
1636 2882 7.961351 TGTTTCCACCATTAGAATGTTTGATT 58.039 30.769 1.78 0.00 34.60 2.57
1644 2890 7.121759 CACTGAGATTGTTTCCACCATTAGAAT 59.878 37.037 0.00 0.00 0.00 2.40
1691 2937 7.227049 TCAATAGCATCCATTCGTGTATAGA 57.773 36.000 0.00 0.00 0.00 1.98
1704 2950 5.841957 AACTCAACCAATCAATAGCATCC 57.158 39.130 0.00 0.00 0.00 3.51
1768 3014 8.574251 TTGAACAAGGCATTACTACAATACAT 57.426 30.769 0.00 0.00 0.00 2.29
1777 3023 9.071276 CCAGATATATTTGAACAAGGCATTACT 57.929 33.333 4.85 0.00 0.00 2.24
1815 3061 7.513371 ACTCGATAAACTCCTCTAGGTATTG 57.487 40.000 0.00 0.00 36.34 1.90
1840 3130 1.201429 AAAGATCTGTCCAGCCCCGT 61.201 55.000 0.00 0.00 0.00 5.28
1913 3785 0.244721 TGCACGTCTCTGACATCAGG 59.755 55.000 8.99 0.74 43.91 3.86
1918 3790 1.471501 GCCATATGCACGTCTCTGACA 60.472 52.381 0.00 0.00 40.77 3.58
1919 3791 1.212616 GCCATATGCACGTCTCTGAC 58.787 55.000 0.00 0.00 40.77 3.51
1973 3845 1.612950 TGCCAGAAAATTGACATGCGT 59.387 42.857 0.00 0.00 0.00 5.24
1976 3848 5.293814 TGTTGTTTGCCAGAAAATTGACATG 59.706 36.000 0.00 0.00 0.00 3.21
1977 3849 5.426504 TGTTGTTTGCCAGAAAATTGACAT 58.573 33.333 0.00 0.00 0.00 3.06
1980 3852 7.010923 GTGTTATGTTGTTTGCCAGAAAATTGA 59.989 33.333 0.00 0.00 0.00 2.57
2012 3884 3.874392 AGTTGGTAAGCATGGCAATTC 57.126 42.857 0.00 0.00 0.00 2.17
2024 3896 4.993028 AGGATGGCAAGTTTAGTTGGTAA 58.007 39.130 0.00 0.00 0.00 2.85
2025 3897 4.650972 AGGATGGCAAGTTTAGTTGGTA 57.349 40.909 0.00 0.00 0.00 3.25
2026 3898 3.525800 AGGATGGCAAGTTTAGTTGGT 57.474 42.857 0.00 0.00 0.00 3.67
2027 3899 3.573967 ACAAGGATGGCAAGTTTAGTTGG 59.426 43.478 0.00 0.00 0.00 3.77
2028 3900 4.037923 ACACAAGGATGGCAAGTTTAGTTG 59.962 41.667 0.00 0.00 0.00 3.16
2029 3901 4.215109 ACACAAGGATGGCAAGTTTAGTT 58.785 39.130 0.00 0.00 0.00 2.24
2030 3902 3.821033 GACACAAGGATGGCAAGTTTAGT 59.179 43.478 0.00 0.00 0.00 2.24
2031 3903 3.820467 TGACACAAGGATGGCAAGTTTAG 59.180 43.478 0.00 0.00 33.52 1.85
2032 3904 3.826524 TGACACAAGGATGGCAAGTTTA 58.173 40.909 0.00 0.00 33.52 2.01
2033 3905 2.665165 TGACACAAGGATGGCAAGTTT 58.335 42.857 0.00 0.00 33.52 2.66
2034 3906 2.363306 TGACACAAGGATGGCAAGTT 57.637 45.000 0.00 0.00 33.52 2.66
2035 3907 2.363306 TTGACACAAGGATGGCAAGT 57.637 45.000 0.00 0.00 42.83 3.16
2037 3909 2.363306 AGTTGACACAAGGATGGCAA 57.637 45.000 0.00 0.00 45.56 4.52
2038 3910 2.363306 AAGTTGACACAAGGATGGCA 57.637 45.000 0.00 0.00 35.12 4.92
2039 3911 4.702131 AGATTAAGTTGACACAAGGATGGC 59.298 41.667 0.00 0.00 0.00 4.40
2040 3912 6.615088 CAAGATTAAGTTGACACAAGGATGG 58.385 40.000 0.00 0.00 0.00 3.51
2041 3913 6.088824 GCAAGATTAAGTTGACACAAGGATG 58.911 40.000 4.84 0.00 0.00 3.51
2042 3914 5.183904 GGCAAGATTAAGTTGACACAAGGAT 59.816 40.000 4.84 0.00 32.69 3.24
2043 3915 4.518970 GGCAAGATTAAGTTGACACAAGGA 59.481 41.667 4.84 0.00 32.69 3.36
2044 3916 4.278170 TGGCAAGATTAAGTTGACACAAGG 59.722 41.667 5.03 0.00 38.04 3.61
2045 3917 5.437289 TGGCAAGATTAAGTTGACACAAG 57.563 39.130 5.03 0.00 38.04 3.16
2049 3921 5.843673 TTTGTGGCAAGATTAAGTTGACA 57.156 34.783 5.03 5.03 40.76 3.58
2070 3942 4.195416 ACCATGGCAAAACGAACATTTTT 58.805 34.783 13.04 0.00 29.17 1.94
2071 3943 3.802866 ACCATGGCAAAACGAACATTTT 58.197 36.364 13.04 0.00 31.87 1.82
2072 3944 3.181471 TGACCATGGCAAAACGAACATTT 60.181 39.130 13.04 0.00 0.00 2.32
2073 3945 2.363680 TGACCATGGCAAAACGAACATT 59.636 40.909 13.04 0.00 0.00 2.71
2074 3946 1.959985 TGACCATGGCAAAACGAACAT 59.040 42.857 13.04 0.00 0.00 2.71
2075 3947 1.066303 GTGACCATGGCAAAACGAACA 59.934 47.619 13.04 0.00 0.00 3.18
2076 3948 1.601914 GGTGACCATGGCAAAACGAAC 60.602 52.381 13.04 0.00 0.00 3.95
2077 3949 0.671251 GGTGACCATGGCAAAACGAA 59.329 50.000 13.04 0.00 0.00 3.85
2078 3950 0.179004 AGGTGACCATGGCAAAACGA 60.179 50.000 13.04 0.00 0.00 3.85
2079 3951 1.199097 GTAGGTGACCATGGCAAAACG 59.801 52.381 13.04 0.00 0.00 3.60
2091 3963 1.200948 AGCGAACGTTAGGTAGGTGAC 59.799 52.381 11.49 0.00 0.00 3.67
2092 3964 1.538047 AGCGAACGTTAGGTAGGTGA 58.462 50.000 11.49 0.00 0.00 4.02
2093 3965 2.421424 ACTAGCGAACGTTAGGTAGGTG 59.579 50.000 34.89 20.98 41.28 4.00
2094 3966 2.716217 ACTAGCGAACGTTAGGTAGGT 58.284 47.619 34.89 23.88 41.28 3.08
2095 3967 3.772060 AACTAGCGAACGTTAGGTAGG 57.228 47.619 34.89 23.42 41.28 3.18
2096 3968 5.050769 TCGATAACTAGCGAACGTTAGGTAG 60.051 44.000 32.40 32.40 41.46 3.18
2097 3969 4.808895 TCGATAACTAGCGAACGTTAGGTA 59.191 41.667 17.41 17.41 41.46 3.08
2098 3970 3.623060 TCGATAACTAGCGAACGTTAGGT 59.377 43.478 17.02 17.02 41.46 3.08
2099 3971 3.964970 GTCGATAACTAGCGAACGTTAGG 59.035 47.826 18.62 2.57 46.12 2.69
2100 3972 3.652216 CGTCGATAACTAGCGAACGTTAG 59.348 47.826 14.42 14.42 46.12 2.34
2101 3973 3.062099 ACGTCGATAACTAGCGAACGTTA 59.938 43.478 0.00 0.00 46.12 3.18
2102 3974 2.159653 ACGTCGATAACTAGCGAACGTT 60.160 45.455 0.00 0.00 46.12 3.99
2103 3975 1.394917 ACGTCGATAACTAGCGAACGT 59.605 47.619 14.52 14.52 46.12 3.99
2104 3976 2.025583 GACGTCGATAACTAGCGAACG 58.974 52.381 0.00 13.63 46.12 3.95
2105 3977 2.223112 TGGACGTCGATAACTAGCGAAC 60.223 50.000 9.92 0.00 46.12 3.95
2106 3978 2.009051 TGGACGTCGATAACTAGCGAA 58.991 47.619 9.92 0.00 46.12 4.70
2107 3979 1.655484 TGGACGTCGATAACTAGCGA 58.345 50.000 9.92 0.00 42.23 4.93
2108 3980 2.031314 TCTTGGACGTCGATAACTAGCG 59.969 50.000 9.92 0.00 36.27 4.26
2109 3981 3.687572 TCTTGGACGTCGATAACTAGC 57.312 47.619 9.92 0.00 0.00 3.42
2110 3982 5.419760 TGATCTTGGACGTCGATAACTAG 57.580 43.478 9.92 0.00 0.00 2.57
2111 3983 5.823209 TTGATCTTGGACGTCGATAACTA 57.177 39.130 9.92 0.00 0.00 2.24
2112 3984 4.713824 TTGATCTTGGACGTCGATAACT 57.286 40.909 9.92 0.00 0.00 2.24
2113 3985 5.773239 TTTTGATCTTGGACGTCGATAAC 57.227 39.130 9.92 0.00 0.00 1.89
2114 3986 5.872617 ACATTTTGATCTTGGACGTCGATAA 59.127 36.000 9.92 4.02 0.00 1.75
2115 3987 5.290885 CACATTTTGATCTTGGACGTCGATA 59.709 40.000 9.92 0.00 0.00 2.92
2116 3988 4.093408 CACATTTTGATCTTGGACGTCGAT 59.907 41.667 9.92 6.81 0.00 3.59
2117 3989 3.431912 CACATTTTGATCTTGGACGTCGA 59.568 43.478 9.92 1.86 0.00 4.20
2118 3990 3.424829 CCACATTTTGATCTTGGACGTCG 60.425 47.826 9.92 0.00 0.00 5.12
2119 3991 3.502211 ACCACATTTTGATCTTGGACGTC 59.498 43.478 7.13 7.13 0.00 4.34
2120 3992 3.486383 ACCACATTTTGATCTTGGACGT 58.514 40.909 0.00 0.00 0.00 4.34
2121 3993 4.503741 AACCACATTTTGATCTTGGACG 57.496 40.909 0.00 0.00 0.00 4.79
2122 3994 6.332630 CCATAACCACATTTTGATCTTGGAC 58.667 40.000 0.00 0.00 0.00 4.02
2123 3995 5.105392 GCCATAACCACATTTTGATCTTGGA 60.105 40.000 0.00 0.00 0.00 3.53
2124 3996 5.105228 AGCCATAACCACATTTTGATCTTGG 60.105 40.000 0.00 0.00 0.00 3.61
2125 3997 5.808540 CAGCCATAACCACATTTTGATCTTG 59.191 40.000 0.00 0.00 0.00 3.02
2126 3998 5.716228 TCAGCCATAACCACATTTTGATCTT 59.284 36.000 0.00 0.00 0.00 2.40
2127 3999 5.263599 TCAGCCATAACCACATTTTGATCT 58.736 37.500 0.00 0.00 0.00 2.75
2128 4000 5.581126 TCAGCCATAACCACATTTTGATC 57.419 39.130 0.00 0.00 0.00 2.92
2129 4001 5.895534 AGATCAGCCATAACCACATTTTGAT 59.104 36.000 0.00 0.00 0.00 2.57
2130 4002 5.125900 CAGATCAGCCATAACCACATTTTGA 59.874 40.000 0.00 0.00 0.00 2.69
2131 4003 5.345702 CAGATCAGCCATAACCACATTTTG 58.654 41.667 0.00 0.00 0.00 2.44
2132 4004 4.403432 CCAGATCAGCCATAACCACATTTT 59.597 41.667 0.00 0.00 0.00 1.82
2133 4005 3.956199 CCAGATCAGCCATAACCACATTT 59.044 43.478 0.00 0.00 0.00 2.32
2134 4006 3.559069 CCAGATCAGCCATAACCACATT 58.441 45.455 0.00 0.00 0.00 2.71
2135 4007 2.750807 GCCAGATCAGCCATAACCACAT 60.751 50.000 0.00 0.00 0.00 3.21
2138 4010 0.918258 TGCCAGATCAGCCATAACCA 59.082 50.000 5.41 0.00 0.00 3.67
2145 4017 2.012902 GCCATTGTGCCAGATCAGCC 62.013 60.000 5.41 0.00 0.00 4.85
2146 4018 1.317431 TGCCATTGTGCCAGATCAGC 61.317 55.000 0.00 0.00 0.00 4.26
2153 4025 0.531657 GTAGCAATGCCATTGTGCCA 59.468 50.000 18.10 0.00 42.20 4.92
2163 4035 9.748708 TTTCCATATTATCTTTTGTAGCAATGC 57.251 29.630 0.00 0.00 0.00 3.56
2192 4064 2.875317 TGTAATCAGCAGTTCGTTTGCA 59.125 40.909 10.21 0.00 43.92 4.08
2196 4068 4.127171 ACAAGTGTAATCAGCAGTTCGTT 58.873 39.130 0.00 0.00 0.00 3.85
2198 4070 4.211164 TCAACAAGTGTAATCAGCAGTTCG 59.789 41.667 0.00 0.00 0.00 3.95
2200 4072 6.639632 AATCAACAAGTGTAATCAGCAGTT 57.360 33.333 0.00 0.00 0.00 3.16
2205 4077 8.908678 CATCACAAAATCAACAAGTGTAATCAG 58.091 33.333 0.00 0.00 0.00 2.90
2219 4091 9.577110 GATGCTCTTATTTTCATCACAAAATCA 57.423 29.630 0.00 0.00 37.23 2.57
2262 4134 7.013750 TCCACATATAAACAACAGCAGAACAAA 59.986 33.333 0.00 0.00 0.00 2.83
2306 4179 4.687483 CACGTCTATAAAGAAAACACCCGT 59.313 41.667 0.00 0.00 32.16 5.28
2307 4180 4.687483 ACACGTCTATAAAGAAAACACCCG 59.313 41.667 0.00 0.00 32.16 5.28
2342 4215 0.811616 CGCTGCCCACCAGAAGTATC 60.812 60.000 0.00 0.00 44.64 2.24
2349 4222 2.032528 TTCTTCGCTGCCCACCAG 59.967 61.111 0.00 0.00 44.67 4.00
2350 4223 2.281484 GTTCTTCGCTGCCCACCA 60.281 61.111 0.00 0.00 0.00 4.17
2351 4224 1.244019 AATGTTCTTCGCTGCCCACC 61.244 55.000 0.00 0.00 0.00 4.61
2352 4225 0.169009 GAATGTTCTTCGCTGCCCAC 59.831 55.000 0.00 0.00 0.00 4.61
2353 4226 0.036732 AGAATGTTCTTCGCTGCCCA 59.963 50.000 0.00 0.00 32.55 5.36
2354 4227 0.449388 CAGAATGTTCTTCGCTGCCC 59.551 55.000 0.00 0.00 34.74 5.36
2355 4228 3.984292 CAGAATGTTCTTCGCTGCC 57.016 52.632 0.00 0.00 34.74 4.85
2372 4245 4.102524 CCACATGATAGTTAGGGCCTAACA 59.897 45.833 42.35 32.01 46.01 2.41
2376 4249 2.439507 CACCACATGATAGTTAGGGCCT 59.560 50.000 12.58 12.58 0.00 5.19
2381 4254 3.558931 TGCCCACCACATGATAGTTAG 57.441 47.619 0.00 0.00 0.00 2.34
2387 4260 1.187974 CACAATGCCCACCACATGAT 58.812 50.000 0.00 0.00 0.00 2.45
2395 4268 1.501169 GAGTTTTGCACAATGCCCAC 58.499 50.000 0.00 0.00 44.23 4.61
2396 4269 0.031857 CGAGTTTTGCACAATGCCCA 59.968 50.000 0.00 0.00 44.23 5.36
2399 4272 5.627172 TCTATTACGAGTTTTGCACAATGC 58.373 37.500 0.00 0.00 45.29 3.56
2400 4273 5.734498 GCTCTATTACGAGTTTTGCACAATG 59.266 40.000 0.00 0.00 33.55 2.82
2401 4274 5.163754 GGCTCTATTACGAGTTTTGCACAAT 60.164 40.000 0.00 0.00 33.55 2.71
2407 4299 3.309954 GCAGGGCTCTATTACGAGTTTTG 59.690 47.826 0.00 0.00 33.55 2.44
2426 4318 9.823098 GCTGATATCAACTTATTATCAAAGCAG 57.177 33.333 6.90 0.00 0.00 4.24
2427 4319 8.786898 GGCTGATATCAACTTATTATCAAAGCA 58.213 33.333 6.90 0.00 0.00 3.91
2428 4320 8.239998 GGGCTGATATCAACTTATTATCAAAGC 58.760 37.037 6.90 1.38 0.00 3.51
2429 4321 8.734386 GGGGCTGATATCAACTTATTATCAAAG 58.266 37.037 6.90 0.00 0.00 2.77
2468 4362 4.260990 CGAAGGAAAGCACACATGTAACAA 60.261 41.667 0.00 0.00 0.00 2.83
2478 4372 1.403679 CCAAACACGAAGGAAAGCACA 59.596 47.619 0.00 0.00 0.00 4.57
2480 4374 1.028905 CCCAAACACGAAGGAAAGCA 58.971 50.000 0.00 0.00 0.00 3.91
2481 4375 0.318699 GCCCAAACACGAAGGAAAGC 60.319 55.000 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.