Multiple sequence alignment - TraesCS1D01G099100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G099100 chr1D 100.000 4229 0 0 1 4229 86205282 86209510 0.000000e+00 7810.0
1 TraesCS1D01G099100 chr3D 79.224 4096 661 105 168 4215 613840171 613844124 0.000000e+00 2675.0
2 TraesCS1D01G099100 chr3D 76.786 616 103 25 3628 4229 613569745 613569156 4.110000e-80 309.0
3 TraesCS1D01G099100 chr3D 98.214 56 1 0 2751 2806 609877448 609877503 9.680000e-17 99.0
4 TraesCS1D01G099100 chr3A 81.818 2277 333 49 163 2401 710667024 710664791 0.000000e+00 1836.0
5 TraesCS1D01G099100 chr3A 79.408 879 139 28 2397 3261 710659549 710658699 2.190000e-162 582.0
6 TraesCS1D01G099100 chr1A 86.987 1145 134 14 584 1718 586889226 586888087 0.000000e+00 1275.0
7 TraesCS1D01G099100 chr1A 81.031 543 80 15 3700 4229 586832714 586832182 1.090000e-110 411.0
8 TraesCS1D01G099100 chr1A 73.494 498 85 23 3503 3972 80675967 80676445 1.230000e-30 145.0
9 TraesCS1D01G099100 chr1A 87.097 124 14 2 466 588 586894430 586894308 5.700000e-29 139.0
10 TraesCS1D01G099100 chr2B 78.348 351 63 8 1152 1491 693335638 693335986 9.210000e-52 215.0
11 TraesCS1D01G099100 chr2B 74.227 388 79 16 3752 4124 693896152 693896533 4.410000e-30 143.0
12 TraesCS1D01G099100 chr2B 91.111 45 3 1 3742 3785 693848838 693848882 4.570000e-05 60.2
13 TraesCS1D01G099100 chr6B 75.785 446 93 15 1152 1587 158167668 158168108 1.190000e-50 211.0
14 TraesCS1D01G099100 chr5D 100.000 28 0 0 1528 1555 500978107 500978134 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G099100 chr1D 86205282 86209510 4228 False 7810 7810 100.000 1 4229 1 chr1D.!!$F1 4228
1 TraesCS1D01G099100 chr3D 613840171 613844124 3953 False 2675 2675 79.224 168 4215 1 chr3D.!!$F2 4047
2 TraesCS1D01G099100 chr3D 613569156 613569745 589 True 309 309 76.786 3628 4229 1 chr3D.!!$R1 601
3 TraesCS1D01G099100 chr3A 710664791 710667024 2233 True 1836 1836 81.818 163 2401 1 chr3A.!!$R2 2238
4 TraesCS1D01G099100 chr3A 710658699 710659549 850 True 582 582 79.408 2397 3261 1 chr3A.!!$R1 864
5 TraesCS1D01G099100 chr1A 586888087 586889226 1139 True 1275 1275 86.987 584 1718 1 chr1A.!!$R2 1134
6 TraesCS1D01G099100 chr1A 586832182 586832714 532 True 411 411 81.031 3700 4229 1 chr1A.!!$R1 529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
78 79 0.108520 GTCCATAACCTTGTCCGCGA 60.109 55.0 8.23 0.0 0.00 5.87 F
82 83 0.178068 ATAACCTTGTCCGCGATGCT 59.822 50.0 8.23 0.0 0.00 3.79 F
440 447 0.251209 ACTGTCGGGCTCTGTCAGTA 60.251 55.0 10.51 0.0 37.55 2.74 F
2067 2086 0.740737 GCCATTTCCTTGTCCCATCG 59.259 55.0 0.00 0.0 0.00 3.84 F
2259 2299 0.242017 AAGCGCATGAGGCAAAACTC 59.758 50.0 11.47 0.0 45.17 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1449 1465 0.958091 CATTCAAGTTGTTCCGCCCA 59.042 50.0 2.11 0.0 0.00 5.36 R
1887 1906 1.112113 GGTAGCGGAGATGGACAAGA 58.888 55.0 0.00 0.0 0.00 3.02 R
2241 2281 0.607489 AGAGTTTTGCCTCATGCGCT 60.607 50.0 9.73 0.0 45.60 5.92 R
3177 3227 0.038166 GGCATGTCACTTCCTTCCCA 59.962 55.0 0.00 0.0 0.00 4.37 R
3513 3579 0.112995 TGGTTCTTGGCAGCCAGAAT 59.887 50.0 21.92 0.0 33.81 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.279120 GCATCCAGGACGAGCTCG 60.279 66.667 33.45 33.45 46.33 5.03
18 19 2.775856 GCATCCAGGACGAGCTCGA 61.776 63.158 40.58 19.13 43.02 4.04
19 20 1.064946 CATCCAGGACGAGCTCGAC 59.935 63.158 40.58 33.42 43.02 4.20
20 21 2.473760 ATCCAGGACGAGCTCGACG 61.474 63.158 40.58 22.20 43.02 5.12
21 22 4.180946 CCAGGACGAGCTCGACGG 62.181 72.222 40.58 29.13 43.02 4.79
22 23 4.838486 CAGGACGAGCTCGACGGC 62.838 72.222 40.58 24.45 43.02 5.68
27 28 4.421479 CGAGCTCGACGGCACCTT 62.421 66.667 32.06 0.00 43.02 3.50
28 29 2.507324 GAGCTCGACGGCACCTTC 60.507 66.667 0.00 0.00 34.17 3.46
29 30 4.421479 AGCTCGACGGCACCTTCG 62.421 66.667 9.13 9.13 38.74 3.79
30 31 4.415332 GCTCGACGGCACCTTCGA 62.415 66.667 16.23 16.23 42.81 3.71
32 33 2.670592 TCGACGGCACCTTCGAGA 60.671 61.111 13.59 0.00 40.79 4.04
33 34 2.504244 CGACGGCACCTTCGAGAC 60.504 66.667 9.79 0.00 39.56 3.36
34 35 2.126031 GACGGCACCTTCGAGACC 60.126 66.667 0.00 0.00 0.00 3.85
39 40 3.744719 CACCTTCGAGACCGCCGA 61.745 66.667 0.00 0.00 35.37 5.54
40 41 3.745803 ACCTTCGAGACCGCCGAC 61.746 66.667 0.00 0.00 35.61 4.79
41 42 4.493747 CCTTCGAGACCGCCGACC 62.494 72.222 0.00 0.00 35.61 4.79
42 43 3.744719 CTTCGAGACCGCCGACCA 61.745 66.667 0.00 0.00 35.61 4.02
43 44 3.966026 CTTCGAGACCGCCGACCAC 62.966 68.421 0.00 0.00 35.61 4.16
46 47 4.773117 GAGACCGCCGACCACGAC 62.773 72.222 0.00 0.00 42.66 4.34
68 69 3.199891 GCGGGTGCGTCCATAACC 61.200 66.667 0.37 0.00 38.11 2.85
69 70 2.582436 CGGGTGCGTCCATAACCT 59.418 61.111 0.37 0.00 38.11 3.50
70 71 1.078708 CGGGTGCGTCCATAACCTT 60.079 57.895 0.37 0.00 38.11 3.50
71 72 1.366111 CGGGTGCGTCCATAACCTTG 61.366 60.000 0.37 0.00 38.11 3.61
72 73 0.322187 GGGTGCGTCCATAACCTTGT 60.322 55.000 0.37 0.00 38.11 3.16
73 74 1.084289 GGTGCGTCCATAACCTTGTC 58.916 55.000 0.00 0.00 35.97 3.18
74 75 1.084289 GTGCGTCCATAACCTTGTCC 58.916 55.000 0.00 0.00 0.00 4.02
75 76 0.390603 TGCGTCCATAACCTTGTCCG 60.391 55.000 0.00 0.00 0.00 4.79
76 77 1.702491 GCGTCCATAACCTTGTCCGC 61.702 60.000 0.00 0.00 0.00 5.54
77 78 1.418342 CGTCCATAACCTTGTCCGCG 61.418 60.000 0.00 0.00 0.00 6.46
78 79 0.108520 GTCCATAACCTTGTCCGCGA 60.109 55.000 8.23 0.00 0.00 5.87
79 80 0.828022 TCCATAACCTTGTCCGCGAT 59.172 50.000 8.23 0.00 0.00 4.58
80 81 0.937304 CCATAACCTTGTCCGCGATG 59.063 55.000 8.23 0.00 0.00 3.84
81 82 0.304705 CATAACCTTGTCCGCGATGC 59.695 55.000 8.23 0.00 0.00 3.91
82 83 0.178068 ATAACCTTGTCCGCGATGCT 59.822 50.000 8.23 0.00 0.00 3.79
83 84 0.459585 TAACCTTGTCCGCGATGCTC 60.460 55.000 8.23 0.00 0.00 4.26
84 85 3.257561 CCTTGTCCGCGATGCTCG 61.258 66.667 8.23 1.80 43.89 5.03
109 110 4.729856 GCCAAAGCTGCCGCCAAG 62.730 66.667 0.00 0.00 36.60 3.61
110 111 4.729856 CCAAAGCTGCCGCCAAGC 62.730 66.667 0.00 0.00 36.60 4.01
111 112 3.677648 CAAAGCTGCCGCCAAGCT 61.678 61.111 0.00 0.00 41.08 3.74
112 113 3.677648 AAAGCTGCCGCCAAGCTG 61.678 61.111 6.01 0.00 39.06 4.24
116 117 4.415332 CTGCCGCCAAGCTGCTTG 62.415 66.667 30.44 30.44 39.43 4.01
123 124 3.045142 CAAGCTGCTTGGGTGTGG 58.955 61.111 29.91 6.85 37.77 4.17
124 125 2.914097 AAGCTGCTTGGGTGTGGC 60.914 61.111 15.16 0.00 0.00 5.01
125 126 3.441712 AAGCTGCTTGGGTGTGGCT 62.442 57.895 15.16 0.00 0.00 4.75
126 127 3.368571 GCTGCTTGGGTGTGGCTC 61.369 66.667 0.00 0.00 0.00 4.70
127 128 3.052082 CTGCTTGGGTGTGGCTCG 61.052 66.667 0.00 0.00 0.00 5.03
128 129 3.832237 CTGCTTGGGTGTGGCTCGT 62.832 63.158 0.00 0.00 0.00 4.18
129 130 3.357079 GCTTGGGTGTGGCTCGTG 61.357 66.667 0.00 0.00 0.00 4.35
130 131 3.357079 CTTGGGTGTGGCTCGTGC 61.357 66.667 0.00 0.00 38.76 5.34
131 132 3.832237 CTTGGGTGTGGCTCGTGCT 62.832 63.158 9.61 0.00 39.59 4.40
132 133 3.825160 TTGGGTGTGGCTCGTGCTC 62.825 63.158 9.61 4.10 39.59 4.26
133 134 4.314440 GGGTGTGGCTCGTGCTCA 62.314 66.667 9.61 6.61 39.59 4.26
134 135 2.046892 GGTGTGGCTCGTGCTCAT 60.047 61.111 9.61 0.00 39.59 2.90
135 136 2.103042 GGTGTGGCTCGTGCTCATC 61.103 63.158 9.61 6.13 39.59 2.92
136 137 1.079543 GTGTGGCTCGTGCTCATCT 60.080 57.895 9.61 0.00 39.59 2.90
137 138 1.079612 TGTGGCTCGTGCTCATCTG 60.080 57.895 9.61 0.00 39.59 2.90
138 139 2.125391 TGGCTCGTGCTCATCTGC 60.125 61.111 9.61 0.00 39.59 4.26
139 140 2.186384 GGCTCGTGCTCATCTGCT 59.814 61.111 9.61 0.00 39.59 4.24
140 141 2.172372 GGCTCGTGCTCATCTGCTG 61.172 63.158 9.61 0.00 39.59 4.41
141 142 2.811066 GCTCGTGCTCATCTGCTGC 61.811 63.158 1.41 0.00 36.03 5.25
142 143 1.153608 CTCGTGCTCATCTGCTGCT 60.154 57.895 0.00 0.00 0.00 4.24
143 144 1.422179 CTCGTGCTCATCTGCTGCTG 61.422 60.000 0.00 0.00 0.00 4.41
144 145 2.792599 GTGCTCATCTGCTGCTGC 59.207 61.111 8.89 8.89 40.20 5.25
153 154 2.592574 TGCTGCTGCAGGTGACAC 60.593 61.111 29.05 12.98 45.31 3.67
154 155 2.281345 GCTGCTGCAGGTGACACT 60.281 61.111 29.05 0.00 39.41 3.55
155 156 1.895707 GCTGCTGCAGGTGACACTT 60.896 57.895 29.05 0.00 39.41 3.16
156 157 0.603707 GCTGCTGCAGGTGACACTTA 60.604 55.000 29.05 0.00 39.41 2.24
157 158 1.151668 CTGCTGCAGGTGACACTTAC 58.848 55.000 21.71 0.00 0.00 2.34
158 159 0.467804 TGCTGCAGGTGACACTTACA 59.532 50.000 17.12 0.00 0.00 2.41
159 160 1.134250 TGCTGCAGGTGACACTTACAA 60.134 47.619 17.12 0.00 0.00 2.41
160 161 1.946768 GCTGCAGGTGACACTTACAAA 59.053 47.619 17.12 0.00 0.00 2.83
161 162 2.287009 GCTGCAGGTGACACTTACAAAC 60.287 50.000 17.12 0.00 0.00 2.93
172 173 5.163353 TGACACTTACAAACCTGATGAGTCA 60.163 40.000 0.00 0.00 0.00 3.41
175 176 4.697352 ACTTACAAACCTGATGAGTCATGC 59.303 41.667 11.20 3.11 32.98 4.06
177 178 3.693807 ACAAACCTGATGAGTCATGCAT 58.306 40.909 11.20 0.00 32.98 3.96
181 182 1.333931 CCTGATGAGTCATGCATGTGC 59.666 52.381 25.43 18.70 42.50 4.57
216 217 2.040544 CCCGTACTCGTACCACCGT 61.041 63.158 1.92 0.00 35.01 4.83
217 218 1.135315 CCGTACTCGTACCACCGTG 59.865 63.158 1.92 0.00 35.01 4.94
220 221 0.730494 GTACTCGTACCACCGTGCAC 60.730 60.000 6.82 6.82 0.00 4.57
222 223 3.258070 CTCGTACCACCGTGCACGA 62.258 63.158 39.10 17.45 43.02 4.35
232 233 0.734942 CCGTGCACGACTTCGGTAAT 60.735 55.000 39.10 0.00 44.95 1.89
252 253 2.088423 TCGACTCCTCTGCTCTTCTTC 58.912 52.381 0.00 0.00 0.00 2.87
257 258 5.129368 ACTCCTCTGCTCTTCTTCTCTAT 57.871 43.478 0.00 0.00 0.00 1.98
277 278 9.091220 TCTCTATCTGTTCATGAAGATGATGAT 57.909 33.333 16.85 12.88 38.43 2.45
281 282 8.834749 ATCTGTTCATGAAGATGATGATAGTG 57.165 34.615 8.80 0.00 38.43 2.74
282 283 8.015185 TCTGTTCATGAAGATGATGATAGTGA 57.985 34.615 8.80 0.00 38.43 3.41
283 284 7.924947 TCTGTTCATGAAGATGATGATAGTGAC 59.075 37.037 8.80 0.00 38.43 3.67
284 285 6.698766 TGTTCATGAAGATGATGATAGTGACG 59.301 38.462 8.80 0.00 38.43 4.35
285 286 6.639632 TCATGAAGATGATGATAGTGACGA 57.360 37.500 0.00 0.00 33.40 4.20
286 287 7.224522 TCATGAAGATGATGATAGTGACGAT 57.775 36.000 0.00 0.00 33.40 3.73
287 288 8.340618 TCATGAAGATGATGATAGTGACGATA 57.659 34.615 0.00 0.00 33.40 2.92
288 289 8.457261 TCATGAAGATGATGATAGTGACGATAG 58.543 37.037 0.00 0.00 33.40 2.08
323 330 0.909623 TGCCCCTAGAGTACCAAAGC 59.090 55.000 0.00 0.00 0.00 3.51
350 357 1.763968 TGATAGGGTGGACGTCTCTG 58.236 55.000 16.46 0.00 0.00 3.35
351 358 1.005569 TGATAGGGTGGACGTCTCTGT 59.994 52.381 16.46 6.62 0.00 3.41
352 359 1.677052 GATAGGGTGGACGTCTCTGTC 59.323 57.143 16.46 11.45 38.17 3.51
370 377 2.742954 TCAGAATGAAATGCATCGCG 57.257 45.000 0.00 0.00 45.97 5.87
373 380 1.331756 AGAATGAAATGCATCGCGGAC 59.668 47.619 6.13 0.00 35.78 4.79
438 445 0.389166 GAACTGTCGGGCTCTGTCAG 60.389 60.000 0.00 0.00 0.00 3.51
440 447 0.251209 ACTGTCGGGCTCTGTCAGTA 60.251 55.000 10.51 0.00 37.55 2.74
451 458 1.066645 TCTGTCAGTACCGAGCTACGA 60.067 52.381 0.00 0.00 45.77 3.43
458 465 2.290093 AGTACCGAGCTACGATTACTGC 59.710 50.000 7.07 0.00 45.77 4.40
465 472 4.212213 AGCTACGATTACTGCGTTCTAG 57.788 45.455 0.00 0.00 42.62 2.43
466 473 3.626670 AGCTACGATTACTGCGTTCTAGT 59.373 43.478 0.00 0.00 42.62 2.57
467 474 3.724751 GCTACGATTACTGCGTTCTAGTG 59.275 47.826 0.00 0.00 42.62 2.74
470 477 3.691118 ACGATTACTGCGTTCTAGTGGTA 59.309 43.478 0.00 0.00 39.18 3.25
471 478 4.337555 ACGATTACTGCGTTCTAGTGGTAT 59.662 41.667 0.00 0.00 39.18 2.73
472 479 5.163581 ACGATTACTGCGTTCTAGTGGTATT 60.164 40.000 0.00 0.00 39.18 1.89
473 480 5.173312 CGATTACTGCGTTCTAGTGGTATTG 59.827 44.000 0.00 0.00 0.00 1.90
474 481 3.247006 ACTGCGTTCTAGTGGTATTGG 57.753 47.619 0.00 0.00 0.00 3.16
475 482 1.933853 CTGCGTTCTAGTGGTATTGGC 59.066 52.381 0.00 0.00 0.00 4.52
565 575 5.480422 GGAACCCCAGAAGAACACAATTATT 59.520 40.000 0.00 0.00 0.00 1.40
582 592 9.715123 CACAATTATTGAGCATATTACAAACGA 57.285 29.630 12.28 0.00 0.00 3.85
622 632 3.223435 ACTCACGGTCATCCCTATAGTG 58.777 50.000 0.00 0.00 0.00 2.74
652 662 3.454812 GGGGCATAGGAAAGACAACTCTA 59.545 47.826 0.00 0.00 0.00 2.43
700 710 6.585416 AGAAGTGCAAGACCATTTCAAAATT 58.415 32.000 0.00 0.00 34.88 1.82
701 711 6.703165 AGAAGTGCAAGACCATTTCAAAATTC 59.297 34.615 0.00 0.00 34.88 2.17
712 722 6.041069 ACCATTTCAAAATTCGAGTTTGGGTA 59.959 34.615 18.28 5.06 36.75 3.69
722 732 5.258456 TCGAGTTTGGGTATGTGTATCTC 57.742 43.478 0.00 0.00 0.00 2.75
737 747 5.926542 TGTGTATCTCTTGACTTTAGTGTGC 59.073 40.000 0.00 0.00 0.00 4.57
778 788 0.839946 TGAGCTCCATCCCTAAAGCC 59.160 55.000 12.15 0.00 35.32 4.35
784 797 1.485066 TCCATCCCTAAAGCCGAAGAC 59.515 52.381 0.00 0.00 0.00 3.01
785 798 1.571919 CATCCCTAAAGCCGAAGACG 58.428 55.000 0.00 0.00 39.43 4.18
790 803 2.809696 CCCTAAAGCCGAAGACGAAAAA 59.190 45.455 0.00 0.00 42.66 1.94
793 806 3.879932 AAAGCCGAAGACGAAAAAGAG 57.120 42.857 0.00 0.00 42.66 2.85
804 817 6.959671 AGACGAAAAAGAGAAAGCAGATAG 57.040 37.500 0.00 0.00 0.00 2.08
811 824 4.734398 AGAGAAAGCAGATAGTGAGGTG 57.266 45.455 0.00 0.00 0.00 4.00
814 827 3.199508 AGAAAGCAGATAGTGAGGTGCAT 59.800 43.478 0.00 0.00 38.44 3.96
912 926 7.730364 ATGGAAATATGGTAATGAAGACGAC 57.270 36.000 0.00 0.00 0.00 4.34
939 953 8.421002 TGGAAAAGATTTTTAGTTCCCTTTCAG 58.579 33.333 0.00 0.00 0.00 3.02
960 974 1.594331 AAGAGCAAGGAAACGGTGAC 58.406 50.000 0.00 0.00 0.00 3.67
969 983 2.878406 AGGAAACGGTGACACAATTCTG 59.122 45.455 8.08 0.00 0.00 3.02
979 993 5.029807 TGACACAATTCTGGTCACAACTA 57.970 39.130 0.00 0.00 36.69 2.24
1009 1023 4.261801 TGAGGTAGCTGAAATGGTAAAGC 58.738 43.478 0.00 0.00 35.86 3.51
1012 1026 5.076873 AGGTAGCTGAAATGGTAAAGCAAA 58.923 37.500 0.00 0.00 38.14 3.68
1024 1038 6.817765 TGGTAAAGCAAAGAGATAAACCAG 57.182 37.500 0.00 0.00 30.01 4.00
1029 1043 8.947115 GTAAAGCAAAGAGATAAACCAGTACAT 58.053 33.333 0.00 0.00 0.00 2.29
1044 1058 5.546499 ACCAGTACATCTAGAAGGTTTGGAA 59.454 40.000 23.27 2.63 0.00 3.53
1061 1075 5.890424 TTGGAACCGAAAGAATATTGGAC 57.110 39.130 0.00 0.00 0.00 4.02
1085 1099 5.466393 CCCTTTTTCTAGCATGTGTTTTTGG 59.534 40.000 0.00 0.00 0.00 3.28
1089 1103 4.829064 TCTAGCATGTGTTTTTGGTGAC 57.171 40.909 0.00 0.00 0.00 3.67
1102 1116 6.127980 TGTTTTTGGTGACACTAATCAACGAA 60.128 34.615 5.11 0.00 39.32 3.85
1200 1214 3.535561 CGTGGGTAGATTGCTGAGAAAT 58.464 45.455 0.00 0.00 0.00 2.17
1203 1217 5.006746 CGTGGGTAGATTGCTGAGAAATAAC 59.993 44.000 0.00 0.00 0.00 1.89
1262 1277 4.387026 AAGAATGGGAATCACAGACCAA 57.613 40.909 0.00 0.00 36.44 3.67
1266 1281 3.354948 TGGGAATCACAGACCAATGAG 57.645 47.619 0.00 0.00 0.00 2.90
1269 1284 2.421424 GGAATCACAGACCAATGAGCAC 59.579 50.000 0.00 0.00 0.00 4.40
1281 1296 4.005650 CCAATGAGCACGATATTATGCCT 58.994 43.478 8.17 0.00 43.12 4.75
1290 1305 5.761003 CACGATATTATGCCTGCATTGAAA 58.239 37.500 10.27 0.00 37.82 2.69
1291 1306 5.854866 CACGATATTATGCCTGCATTGAAAG 59.145 40.000 10.27 1.54 37.82 2.62
1308 1323 7.926555 GCATTGAAAGTTAGCTATGACTACCTA 59.073 37.037 0.00 0.00 0.00 3.08
1371 1387 7.703058 ATTTCCGGAAGATTACAAGTTTGAT 57.297 32.000 17.97 0.00 0.00 2.57
1372 1388 8.801882 ATTTCCGGAAGATTACAAGTTTGATA 57.198 30.769 17.97 0.00 0.00 2.15
1383 1399 4.573900 ACAAGTTTGATAGTGAGGAGCTG 58.426 43.478 0.00 0.00 0.00 4.24
1392 1408 5.188555 TGATAGTGAGGAGCTGATTCACTTT 59.811 40.000 22.19 16.92 46.89 2.66
1455 1471 5.520376 AAAGAATTGAAGATATTGGGCGG 57.480 39.130 0.00 0.00 0.00 6.13
1530 1547 9.174166 GGTGATTCAGGTAAACACTATGTTATT 57.826 33.333 0.00 0.00 40.14 1.40
1542 1559 5.819379 ACACTATGTTATTCATGACCTGCTG 59.181 40.000 0.00 0.00 37.91 4.41
1575 1592 4.320788 GCATTGAAGGTTTCCTCACAAGAG 60.321 45.833 11.44 0.00 41.72 2.85
1593 1610 8.851145 TCACAAGAGTGTCTACATATATCTTCC 58.149 37.037 0.00 0.00 46.01 3.46
1607 1624 1.490574 TCTTCCTCTAGCCCAAGAGC 58.509 55.000 3.39 0.00 41.48 4.09
1629 1646 4.082571 GCTGTAGAAATTGCACCATCTGTT 60.083 41.667 4.93 0.00 0.00 3.16
1660 1677 7.071698 ACTTGTCCATTAGTATGAGTGATCCAT 59.928 37.037 0.00 0.00 33.37 3.41
1663 1680 6.014242 GTCCATTAGTATGAGTGATCCATCCA 60.014 42.308 0.00 0.00 33.37 3.41
1683 1700 5.684704 TCCAATAGTGAGGATGGAATTGTC 58.315 41.667 0.00 0.00 38.95 3.18
1692 1709 7.234166 AGTGAGGATGGAATTGTCAAAGAAAAT 59.766 33.333 0.00 0.00 0.00 1.82
1741 1760 7.971183 AGAAAGATACTGAAAACTGAGAACC 57.029 36.000 0.00 0.00 0.00 3.62
1743 1762 8.871125 AGAAAGATACTGAAAACTGAGAACCTA 58.129 33.333 0.00 0.00 0.00 3.08
1765 1784 3.044986 CGCACTTTGATGTTGTTTGGAG 58.955 45.455 0.00 0.00 0.00 3.86
1767 1786 4.557296 CGCACTTTGATGTTGTTTGGAGAT 60.557 41.667 0.00 0.00 0.00 2.75
1770 1789 6.363357 GCACTTTGATGTTGTTTGGAGATTAC 59.637 38.462 0.00 0.00 0.00 1.89
1771 1790 7.424803 CACTTTGATGTTGTTTGGAGATTACA 58.575 34.615 0.00 0.00 0.00 2.41
1788 1807 1.490621 ACAATGCAAGCTTTGTTCGC 58.509 45.000 17.36 0.00 40.03 4.70
1801 1820 4.966366 GCTTTGTTCGCATATTCAGTGATC 59.034 41.667 0.00 0.00 0.00 2.92
1821 1840 9.186837 AGTGATCTATTCAAAGATGCAAAATCT 57.813 29.630 0.00 0.00 36.33 2.40
1833 1852 3.487985 GCAAAATCTTTGCGTGTTGTC 57.512 42.857 8.24 0.00 35.58 3.18
1856 1875 7.717436 TGTCTATTTGTCAACAATGTTCTACCA 59.283 33.333 0.00 0.00 35.55 3.25
1863 1882 5.240623 GTCAACAATGTTCTACCATGTGGAA 59.759 40.000 5.96 0.00 38.94 3.53
1865 1884 6.493115 TCAACAATGTTCTACCATGTGGAATT 59.507 34.615 5.96 0.00 35.64 2.17
1884 1903 6.640499 TGGAATTTCTATTGCACAACTTTTCG 59.360 34.615 0.00 0.00 37.20 3.46
1885 1904 6.089417 GGAATTTCTATTGCACAACTTTTCGG 59.911 38.462 0.00 0.00 32.81 4.30
1887 1906 5.957842 TTCTATTGCACAACTTTTCGGAT 57.042 34.783 0.00 0.00 0.00 4.18
1925 1944 2.366266 ACCTACGGCTTGTGTCAAAGTA 59.634 45.455 0.00 0.00 0.00 2.24
1927 1946 4.000988 CCTACGGCTTGTGTCAAAGTATT 58.999 43.478 0.00 0.00 0.00 1.89
1928 1947 5.172934 CCTACGGCTTGTGTCAAAGTATTA 58.827 41.667 0.00 0.00 0.00 0.98
1933 1952 7.549839 ACGGCTTGTGTCAAAGTATTATAGTA 58.450 34.615 0.00 0.00 0.00 1.82
1999 2018 3.430929 GGTGCTAGACATAAGTGACTGGG 60.431 52.174 0.00 0.00 32.67 4.45
2006 2025 1.909302 CATAAGTGACTGGGAGGGTGT 59.091 52.381 0.00 0.00 0.00 4.16
2018 2037 2.554344 GGGAGGGTGTTCATAGTTTGCA 60.554 50.000 0.00 0.00 0.00 4.08
2021 2040 2.147958 GGGTGTTCATAGTTTGCACGA 58.852 47.619 0.00 0.00 0.00 4.35
2025 2044 4.024387 GGTGTTCATAGTTTGCACGAAGAA 60.024 41.667 0.00 0.00 0.00 2.52
2030 2049 4.155826 TCATAGTTTGCACGAAGAAATGGG 59.844 41.667 0.00 0.00 0.00 4.00
2065 2084 1.322538 GCGCCATTTCCTTGTCCCAT 61.323 55.000 0.00 0.00 0.00 4.00
2067 2086 0.740737 GCCATTTCCTTGTCCCATCG 59.259 55.000 0.00 0.00 0.00 3.84
2071 2111 3.565482 CCATTTCCTTGTCCCATCGTATG 59.435 47.826 0.00 0.00 0.00 2.39
2107 2147 9.716507 CGAATATTTGTAATGTGGGAAAACTAG 57.283 33.333 0.00 0.00 0.00 2.57
2121 2161 7.385478 GTGGGAAAACTAGAGAACTTACAAGAG 59.615 40.741 0.00 0.00 0.00 2.85
2125 2165 9.694137 GAAAACTAGAGAACTTACAAGAGCTAA 57.306 33.333 0.00 0.00 0.00 3.09
2130 2170 7.768807 AGAGAACTTACAAGAGCTAAAGAGA 57.231 36.000 0.00 0.00 0.00 3.10
2164 2204 6.670695 AGCAAGAAAGTAATGGGTTTGAAT 57.329 33.333 0.00 0.00 0.00 2.57
2168 2208 9.435688 GCAAGAAAGTAATGGGTTTGAATTAAT 57.564 29.630 0.00 0.00 0.00 1.40
2191 2231 3.100671 GAGCTGGGGAAACTAGAAGAGA 58.899 50.000 0.00 0.00 0.00 3.10
2206 2246 7.231467 ACTAGAAGAGATAGGAGGATCACTTC 58.769 42.308 12.75 12.75 45.97 3.01
2213 2253 6.590068 AGATAGGAGGATCACTTCACATTTG 58.410 40.000 0.00 0.00 36.25 2.32
2214 2254 3.350833 AGGAGGATCACTTCACATTTGC 58.649 45.455 0.00 0.00 36.25 3.68
2223 2263 6.146601 TCACTTCACATTTGCAATCTTGAA 57.853 33.333 0.00 8.31 0.00 2.69
2259 2299 0.242017 AAGCGCATGAGGCAAAACTC 59.758 50.000 11.47 0.00 45.17 3.01
2263 2303 2.729156 GCGCATGAGGCAAAACTCTTAC 60.729 50.000 0.30 0.00 45.17 2.34
2264 2304 2.474526 CGCATGAGGCAAAACTCTTACG 60.475 50.000 0.00 0.00 45.17 3.18
2272 2312 4.109766 GGCAAAACTCTTACGCAAAAACT 58.890 39.130 0.00 0.00 0.00 2.66
2302 2342 3.994392 GCGATTAACACTCAGTTGGAAGA 59.006 43.478 0.00 0.00 41.50 2.87
2310 2350 0.250727 TCAGTTGGAAGAAAGGCCGG 60.251 55.000 0.00 0.00 0.00 6.13
2313 2353 0.536460 GTTGGAAGAAAGGCCGGTCA 60.536 55.000 9.71 0.00 0.00 4.02
2318 2358 2.422479 GGAAGAAAGGCCGGTCAAATAC 59.578 50.000 9.71 0.00 0.00 1.89
2330 2370 2.163010 GGTCAAATACGAGTCCTGACGA 59.837 50.000 0.00 0.00 37.80 4.20
2352 2392 7.038659 ACGAAGAAGATCAATTACTTGAGAGG 58.961 38.462 1.80 0.00 44.32 3.69
2404 2444 0.469331 CATTGATGGGCATGGAGGCT 60.469 55.000 0.00 0.00 43.56 4.58
2429 2469 2.682846 CCCTACATGGCTGGGCAA 59.317 61.111 6.94 0.00 33.88 4.52
2438 2478 1.422531 TGGCTGGGCAAAAATCTGTT 58.577 45.000 0.00 0.00 0.00 3.16
2439 2479 1.070445 TGGCTGGGCAAAAATCTGTTG 59.930 47.619 0.00 0.00 0.00 3.33
2461 2501 1.274712 CAAAGGTCTGGAGGCTCTCT 58.725 55.000 15.23 2.15 0.00 3.10
2473 2513 1.065600 GCTCTCTGCCTAGACAGCG 59.934 63.158 0.35 0.00 35.67 5.18
2518 2558 6.000219 CCCCTTGGAGAGTTATATGTGATTG 59.000 44.000 0.00 0.00 0.00 2.67
2519 2559 6.000219 CCCTTGGAGAGTTATATGTGATTGG 59.000 44.000 0.00 0.00 0.00 3.16
2520 2560 6.409695 CCCTTGGAGAGTTATATGTGATTGGT 60.410 42.308 0.00 0.00 0.00 3.67
2521 2561 6.708054 CCTTGGAGAGTTATATGTGATTGGTC 59.292 42.308 0.00 0.00 0.00 4.02
2522 2562 6.806668 TGGAGAGTTATATGTGATTGGTCA 57.193 37.500 0.00 0.00 0.00 4.02
2523 2563 7.194112 TGGAGAGTTATATGTGATTGGTCAA 57.806 36.000 0.00 0.00 35.80 3.18
2524 2564 7.805163 TGGAGAGTTATATGTGATTGGTCAAT 58.195 34.615 0.00 0.00 35.80 2.57
2525 2565 7.933577 TGGAGAGTTATATGTGATTGGTCAATC 59.066 37.037 14.75 14.75 45.55 2.67
2526 2566 8.153550 GGAGAGTTATATGTGATTGGTCAATCT 58.846 37.037 20.19 7.06 45.55 2.40
2527 2567 8.899427 AGAGTTATATGTGATTGGTCAATCTG 57.101 34.615 20.19 0.00 45.55 2.90
2528 2568 8.489489 AGAGTTATATGTGATTGGTCAATCTGT 58.511 33.333 20.19 11.11 45.55 3.41
2529 2569 9.764363 GAGTTATATGTGATTGGTCAATCTGTA 57.236 33.333 20.19 12.45 45.55 2.74
2530 2570 9.770097 AGTTATATGTGATTGGTCAATCTGTAG 57.230 33.333 20.19 0.00 45.55 2.74
2531 2571 9.764363 GTTATATGTGATTGGTCAATCTGTAGA 57.236 33.333 20.19 8.07 45.55 2.59
2533 2573 8.899427 ATATGTGATTGGTCAATCTGTAGAAG 57.101 34.615 20.19 0.00 45.55 2.85
2534 2574 6.358974 TGTGATTGGTCAATCTGTAGAAGA 57.641 37.500 20.19 0.40 45.55 2.87
2535 2575 6.401394 TGTGATTGGTCAATCTGTAGAAGAG 58.599 40.000 20.19 0.00 45.55 2.85
2555 2595 1.271102 GCGTGAGTCTGGAGAAGAGTT 59.729 52.381 0.00 0.00 38.78 3.01
2558 2598 3.984633 CGTGAGTCTGGAGAAGAGTTTTC 59.015 47.826 0.00 0.00 38.78 2.29
2559 2599 4.311606 GTGAGTCTGGAGAAGAGTTTTCC 58.688 47.826 0.00 0.00 38.78 3.13
2560 2600 3.967326 TGAGTCTGGAGAAGAGTTTTCCA 59.033 43.478 0.00 0.00 38.78 3.53
2575 2618 0.895100 TTCCAGTTGCATCACAGGCC 60.895 55.000 0.00 0.00 0.00 5.19
2592 2635 2.026636 AGGCCCATGCTTTCGTAACTTA 60.027 45.455 0.00 0.00 37.74 2.24
2607 2650 9.762933 TTTCGTAACTTAAAAAGGCTAGAACTA 57.237 29.630 0.00 0.00 0.00 2.24
2625 2668 6.252995 AGAACTAATTGGGTTGCCAAGATTA 58.747 36.000 0.00 0.00 32.97 1.75
2628 2671 6.252995 ACTAATTGGGTTGCCAAGATTAAGA 58.747 36.000 0.00 0.00 32.97 2.10
2636 2679 4.591321 TGCCAAGATTAAGAAGATGGGT 57.409 40.909 0.00 0.00 0.00 4.51
2676 2719 6.461788 GCCCTTGGTACTTCTCACTTATAGAG 60.462 46.154 0.00 0.00 34.42 2.43
2747 2790 8.849543 TCATCTTATACTAGTTGTTACCCCTT 57.150 34.615 0.00 0.00 0.00 3.95
2753 2796 4.722220 ACTAGTTGTTACCCCTTGGAAAC 58.278 43.478 0.00 0.00 34.81 2.78
2759 2802 4.403734 TGTTACCCCTTGGAAACAGATTC 58.596 43.478 0.00 0.00 44.54 2.52
2760 2803 4.141135 TGTTACCCCTTGGAAACAGATTCA 60.141 41.667 0.00 0.00 44.54 2.57
2761 2804 3.833559 ACCCCTTGGAAACAGATTCAT 57.166 42.857 0.00 0.00 44.54 2.57
2762 2805 3.434309 ACCCCTTGGAAACAGATTCATG 58.566 45.455 0.00 0.00 44.54 3.07
2787 2830 5.222048 TGTGACTTGGTTTCCTAGGCTAAAT 60.222 40.000 2.96 0.00 35.45 1.40
2788 2831 5.123979 GTGACTTGGTTTCCTAGGCTAAATG 59.876 44.000 2.96 0.00 35.45 2.32
2789 2832 5.013704 TGACTTGGTTTCCTAGGCTAAATGA 59.986 40.000 2.96 0.00 35.45 2.57
2810 2853 4.142403 TGAGCTTAAAATTGAGGATTGCCG 60.142 41.667 0.00 0.00 39.96 5.69
2814 2857 5.062183 GCTTAAAATTGAGGATTGCCGAAAC 59.938 40.000 0.00 0.00 39.96 2.78
2817 2860 1.533625 TTGAGGATTGCCGAAACCTG 58.466 50.000 0.00 0.00 39.96 4.00
2823 2866 1.606668 GATTGCCGAAACCTGTTGTCA 59.393 47.619 0.00 0.00 0.00 3.58
2845 2888 5.540337 TCACTGCCTCCTATTCCTTATAGTG 59.460 44.000 0.00 0.00 35.42 2.74
2848 2891 4.523173 TGCCTCCTATTCCTTATAGTGACG 59.477 45.833 0.00 0.00 35.42 4.35
2864 2907 1.864711 TGACGCTTTGTGCTCTGTTAC 59.135 47.619 0.00 0.00 40.11 2.50
2869 2912 2.872245 GCTTTGTGCTCTGTTACACTGA 59.128 45.455 0.00 0.00 37.68 3.41
2870 2913 3.303395 GCTTTGTGCTCTGTTACACTGAC 60.303 47.826 0.00 0.00 37.68 3.51
2873 2919 1.787155 GTGCTCTGTTACACTGACACG 59.213 52.381 0.00 0.00 33.92 4.49
2877 2923 2.789339 CTCTGTTACACTGACACGTGTG 59.211 50.000 28.82 15.53 46.77 3.82
2890 2936 1.293498 CGTGTGGGAAGAGGTCTGG 59.707 63.158 0.00 0.00 0.00 3.86
2900 2946 2.131776 AGAGGTCTGGAGGAGTTACG 57.868 55.000 0.00 0.00 0.00 3.18
2904 2950 3.952967 GAGGTCTGGAGGAGTTACGTTAT 59.047 47.826 0.00 0.00 0.00 1.89
2908 2954 5.337009 GGTCTGGAGGAGTTACGTTATTCAA 60.337 44.000 0.00 0.00 0.00 2.69
2909 2955 5.805994 GTCTGGAGGAGTTACGTTATTCAAG 59.194 44.000 0.00 0.00 0.00 3.02
2911 2957 4.020928 TGGAGGAGTTACGTTATTCAAGCA 60.021 41.667 0.00 0.00 0.00 3.91
2914 2960 6.072893 GGAGGAGTTACGTTATTCAAGCAAAA 60.073 38.462 0.00 0.00 0.00 2.44
2917 2963 7.040686 AGGAGTTACGTTATTCAAGCAAAACAT 60.041 33.333 0.00 0.00 0.00 2.71
2918 2964 8.231837 GGAGTTACGTTATTCAAGCAAAACATA 58.768 33.333 0.00 0.00 0.00 2.29
2919 2965 9.769093 GAGTTACGTTATTCAAGCAAAACATAT 57.231 29.630 0.00 0.00 0.00 1.78
2920 2966 9.769093 AGTTACGTTATTCAAGCAAAACATATC 57.231 29.630 0.00 0.00 0.00 1.63
2921 2967 9.549509 GTTACGTTATTCAAGCAAAACATATCA 57.450 29.630 0.00 0.00 0.00 2.15
2924 2970 7.962918 ACGTTATTCAAGCAAAACATATCACTC 59.037 33.333 0.00 0.00 0.00 3.51
2942 2988 6.114187 TCACTCTTTGAGCATAGAAGGAAA 57.886 37.500 0.00 0.00 32.04 3.13
2945 2991 5.884792 ACTCTTTGAGCATAGAAGGAAATGG 59.115 40.000 0.00 0.00 32.04 3.16
2948 2994 4.842531 TGAGCATAGAAGGAAATGGTGA 57.157 40.909 0.00 0.00 34.16 4.02
2950 2996 6.499106 TGAGCATAGAAGGAAATGGTGATA 57.501 37.500 0.00 0.00 34.16 2.15
2959 3005 5.252586 AGGAAATGGTGATATGCATAGCT 57.747 39.130 21.66 1.24 0.00 3.32
2967 3013 7.008021 TGGTGATATGCATAGCTTAGATGAA 57.992 36.000 21.66 0.00 0.00 2.57
2973 3019 4.513442 TGCATAGCTTAGATGAAACGGTT 58.487 39.130 0.00 0.00 0.00 4.44
2978 3024 3.057526 AGCTTAGATGAAACGGTTTTGGC 60.058 43.478 7.65 5.26 0.00 4.52
2979 3026 3.305064 GCTTAGATGAAACGGTTTTGGCA 60.305 43.478 7.65 1.86 0.00 4.92
3015 3062 7.916914 AACCCAACTACAAATACTGTGTATC 57.083 36.000 0.00 0.00 39.20 2.24
3061 3108 5.606348 AAAACACCTTCAAATGCTAACCA 57.394 34.783 0.00 0.00 0.00 3.67
3062 3109 5.806654 AAACACCTTCAAATGCTAACCAT 57.193 34.783 0.00 0.00 35.06 3.55
3067 3114 4.021192 ACCTTCAAATGCTAACCATGTTGG 60.021 41.667 0.00 0.00 45.02 3.77
3075 3122 2.941415 GCTAACCATGTTGGAGACCCTG 60.941 54.545 0.00 0.00 40.96 4.45
3082 3129 4.569653 CCATGTTGGAGACCCTGGAAATAA 60.570 45.833 0.00 0.00 40.96 1.40
3090 3137 5.510430 GAGACCCTGGAAATAAATGGTTCT 58.490 41.667 0.00 0.00 0.00 3.01
3095 3142 5.656416 CCCTGGAAATAAATGGTTCTAGCAA 59.344 40.000 0.00 0.00 32.60 3.91
3097 3144 7.147672 CCCTGGAAATAAATGGTTCTAGCAATT 60.148 37.037 0.00 0.00 32.60 2.32
3098 3145 8.260114 CCTGGAAATAAATGGTTCTAGCAATTT 58.740 33.333 0.00 0.00 32.60 1.82
3107 3154 4.644685 TGGTTCTAGCAATTTATTCCTGCC 59.355 41.667 0.00 0.00 36.73 4.85
3146 3196 2.880890 CCATATGGCAGCTTCCAGTTAC 59.119 50.000 11.70 0.00 39.89 2.50
3154 3204 3.818773 GCAGCTTCCAGTTACCAGTTTAA 59.181 43.478 0.00 0.00 0.00 1.52
3155 3205 4.277423 GCAGCTTCCAGTTACCAGTTTAAA 59.723 41.667 0.00 0.00 0.00 1.52
3156 3206 5.221165 GCAGCTTCCAGTTACCAGTTTAAAA 60.221 40.000 0.00 0.00 0.00 1.52
3157 3207 6.516693 GCAGCTTCCAGTTACCAGTTTAAAAT 60.517 38.462 0.00 0.00 0.00 1.82
3160 3210 9.309224 AGCTTCCAGTTACCAGTTTAAAATTAT 57.691 29.630 0.00 0.00 0.00 1.28
3168 3218 6.280855 ACCAGTTTAAAATTATGGAGGTGC 57.719 37.500 13.86 0.00 34.99 5.01
3169 3219 5.777732 ACCAGTTTAAAATTATGGAGGTGCA 59.222 36.000 13.86 0.00 34.99 4.57
3170 3220 6.268847 ACCAGTTTAAAATTATGGAGGTGCAA 59.731 34.615 13.86 0.00 34.99 4.08
3172 3222 7.823799 CCAGTTTAAAATTATGGAGGTGCAATT 59.176 33.333 0.00 0.00 32.55 2.32
3173 3223 9.218440 CAGTTTAAAATTATGGAGGTGCAATTT 57.782 29.630 0.00 0.00 33.24 1.82
3187 3240 4.321974 GGTGCAATTTTAGTGGGAAGGAAG 60.322 45.833 0.00 0.00 0.00 3.46
3193 3246 4.993705 TTTAGTGGGAAGGAAGTGACAT 57.006 40.909 0.00 0.00 0.00 3.06
3195 3248 1.168714 GTGGGAAGGAAGTGACATGC 58.831 55.000 0.00 0.00 0.00 4.06
3201 3254 3.526534 GAAGGAAGTGACATGCCTACTC 58.473 50.000 0.00 0.00 0.00 2.59
3221 3274 2.109774 CACTCATCTCCCTGAGCTCTT 58.890 52.381 16.19 0.00 45.37 2.85
3222 3275 2.109774 ACTCATCTCCCTGAGCTCTTG 58.890 52.381 16.19 7.77 45.37 3.02
3240 3294 5.634118 CTCTTGGCTTGAATATATGGGGAA 58.366 41.667 0.00 0.00 0.00 3.97
3255 3309 4.553330 TGGGGAAGTGAGAAGATAACAC 57.447 45.455 0.00 0.00 35.15 3.32
3261 3315 4.866508 AGTGAGAAGATAACACGGTTGA 57.133 40.909 0.00 0.00 39.19 3.18
3262 3316 5.209818 AGTGAGAAGATAACACGGTTGAA 57.790 39.130 0.00 0.00 39.19 2.69
3263 3317 5.794894 AGTGAGAAGATAACACGGTTGAAT 58.205 37.500 0.00 0.00 39.19 2.57
3273 3327 2.398554 CGGTTGAATGTGGAGGCCG 61.399 63.158 0.00 0.00 0.00 6.13
3278 3338 1.153086 GAATGTGGAGGCCGAGCAT 60.153 57.895 0.00 0.00 0.00 3.79
3291 3351 0.040514 CGAGCATCAACAAACGGCAA 60.041 50.000 0.00 0.00 33.17 4.52
3296 3356 1.978097 CATCAACAAACGGCAACATCG 59.022 47.619 0.00 0.00 0.00 3.84
3297 3357 0.317436 TCAACAAACGGCAACATCGC 60.317 50.000 0.00 0.00 0.00 4.58
3298 3358 0.593518 CAACAAACGGCAACATCGCA 60.594 50.000 0.00 0.00 0.00 5.10
3299 3359 0.313672 AACAAACGGCAACATCGCAT 59.686 45.000 0.00 0.00 0.00 4.73
3300 3360 0.313672 ACAAACGGCAACATCGCATT 59.686 45.000 0.00 0.00 0.00 3.56
3301 3361 0.984109 CAAACGGCAACATCGCATTC 59.016 50.000 0.00 0.00 0.00 2.67
3302 3362 0.595588 AAACGGCAACATCGCATTCA 59.404 45.000 0.00 0.00 0.00 2.57
3303 3363 0.109781 AACGGCAACATCGCATTCAC 60.110 50.000 0.00 0.00 0.00 3.18
3304 3364 0.955428 ACGGCAACATCGCATTCACT 60.955 50.000 0.00 0.00 0.00 3.41
3305 3365 0.521867 CGGCAACATCGCATTCACTG 60.522 55.000 0.00 0.00 0.00 3.66
3316 3376 3.417690 GCATTCACTGCCATCTTCTTC 57.582 47.619 0.00 0.00 45.66 2.87
3317 3377 2.751259 GCATTCACTGCCATCTTCTTCA 59.249 45.455 0.00 0.00 45.66 3.02
3318 3378 3.181499 GCATTCACTGCCATCTTCTTCAG 60.181 47.826 0.00 0.00 45.66 3.02
3324 3384 1.556451 TGCCATCTTCTTCAGCTGCTA 59.444 47.619 9.47 0.00 0.00 3.49
3327 3387 3.003482 GCCATCTTCTTCAGCTGCTATTG 59.997 47.826 9.47 0.00 0.00 1.90
3342 3402 5.756195 TGCTATTGAATTGCAGGATACAC 57.244 39.130 10.11 0.00 36.15 2.90
3343 3403 5.192176 TGCTATTGAATTGCAGGATACACA 58.808 37.500 10.11 0.00 36.15 3.72
3344 3404 5.829391 TGCTATTGAATTGCAGGATACACAT 59.171 36.000 10.11 0.00 36.15 3.21
3345 3405 6.147581 GCTATTGAATTGCAGGATACACATG 58.852 40.000 6.72 0.00 41.41 3.21
3346 3406 4.987408 TTGAATTGCAGGATACACATGG 57.013 40.909 0.00 0.00 41.41 3.66
3347 3407 4.233632 TGAATTGCAGGATACACATGGA 57.766 40.909 0.00 0.00 41.41 3.41
3348 3408 4.598022 TGAATTGCAGGATACACATGGAA 58.402 39.130 0.00 0.00 43.65 3.53
3354 3420 3.562973 GCAGGATACACATGGAACAGATG 59.437 47.826 0.00 0.00 41.51 2.90
3356 3422 5.055144 CAGGATACACATGGAACAGATGAG 58.945 45.833 0.00 0.00 41.51 2.90
3367 3433 5.240891 TGGAACAGATGAGCAACTAGAAAG 58.759 41.667 0.00 0.00 0.00 2.62
3370 3436 5.736951 ACAGATGAGCAACTAGAAAGAGT 57.263 39.130 0.00 0.00 0.00 3.24
3380 3446 2.564947 ACTAGAAAGAGTGCAGGAGGTG 59.435 50.000 0.00 0.00 0.00 4.00
3382 3448 0.687354 GAAAGAGTGCAGGAGGTGGA 59.313 55.000 0.00 0.00 0.00 4.02
3383 3449 0.689623 AAAGAGTGCAGGAGGTGGAG 59.310 55.000 0.00 0.00 0.00 3.86
3385 3451 1.610673 GAGTGCAGGAGGTGGAGGA 60.611 63.158 0.00 0.00 0.00 3.71
3386 3452 1.152030 AGTGCAGGAGGTGGAGGAA 60.152 57.895 0.00 0.00 0.00 3.36
3388 3454 1.158466 TGCAGGAGGTGGAGGAAGA 59.842 57.895 0.00 0.00 0.00 2.87
3391 3457 0.980231 CAGGAGGTGGAGGAAGAGGG 60.980 65.000 0.00 0.00 0.00 4.30
3394 3460 0.041982 GAGGTGGAGGAAGAGGGAGT 59.958 60.000 0.00 0.00 0.00 3.85
3396 3462 1.289530 AGGTGGAGGAAGAGGGAGTAG 59.710 57.143 0.00 0.00 0.00 2.57
3397 3463 1.116308 GTGGAGGAAGAGGGAGTAGC 58.884 60.000 0.00 0.00 0.00 3.58
3399 3465 1.292242 TGGAGGAAGAGGGAGTAGCAT 59.708 52.381 0.00 0.00 0.00 3.79
3400 3466 1.967779 GGAGGAAGAGGGAGTAGCATC 59.032 57.143 0.00 0.00 0.00 3.91
3402 3468 3.238597 GAGGAAGAGGGAGTAGCATCAT 58.761 50.000 0.00 0.00 0.00 2.45
3403 3469 3.645687 GAGGAAGAGGGAGTAGCATCATT 59.354 47.826 0.00 0.00 0.00 2.57
3407 3473 5.047377 GGAAGAGGGAGTAGCATCATTAGAG 60.047 48.000 0.00 0.00 0.00 2.43
3410 3476 4.415596 AGGGAGTAGCATCATTAGAGGAG 58.584 47.826 0.00 0.00 0.00 3.69
3412 3478 4.156477 GGAGTAGCATCATTAGAGGAGGT 58.844 47.826 0.00 0.00 0.00 3.85
3413 3479 4.591072 GGAGTAGCATCATTAGAGGAGGTT 59.409 45.833 0.00 0.00 0.00 3.50
3415 3481 4.965532 AGTAGCATCATTAGAGGAGGTTGT 59.034 41.667 0.00 0.00 0.00 3.32
3416 3482 4.851639 AGCATCATTAGAGGAGGTTGTT 57.148 40.909 0.00 0.00 0.00 2.83
3417 3483 4.521146 AGCATCATTAGAGGAGGTTGTTG 58.479 43.478 0.00 0.00 0.00 3.33
3418 3484 4.018960 AGCATCATTAGAGGAGGTTGTTGT 60.019 41.667 0.00 0.00 0.00 3.32
3419 3485 5.189736 AGCATCATTAGAGGAGGTTGTTGTA 59.810 40.000 0.00 0.00 0.00 2.41
3420 3486 5.525378 GCATCATTAGAGGAGGTTGTTGTAG 59.475 44.000 0.00 0.00 0.00 2.74
3421 3487 6.630413 GCATCATTAGAGGAGGTTGTTGTAGA 60.630 42.308 0.00 0.00 0.00 2.59
3422 3488 6.928348 TCATTAGAGGAGGTTGTTGTAGAA 57.072 37.500 0.00 0.00 0.00 2.10
3423 3489 6.698380 TCATTAGAGGAGGTTGTTGTAGAAC 58.302 40.000 0.00 0.00 0.00 3.01
3437 3503 6.513180 TGTTGTAGAACAAGAAGAAGACGAT 58.487 36.000 2.40 0.00 39.00 3.73
3453 3519 1.897615 GATGATGGGCTGCTGCTCC 60.898 63.158 13.44 13.60 39.40 4.70
3459 3525 4.537433 GGCTGCTGCTCCTACCGG 62.537 72.222 15.64 0.00 39.59 5.28
3471 3537 2.122989 TACCGGCCCATCTCTCCC 60.123 66.667 0.00 0.00 0.00 4.30
3477 3543 2.866726 GCCCATCTCTCCCGCTCTC 61.867 68.421 0.00 0.00 0.00 3.20
3480 3546 0.467106 CCATCTCTCCCGCTCTCTCA 60.467 60.000 0.00 0.00 0.00 3.27
3481 3547 0.953727 CATCTCTCCCGCTCTCTCAG 59.046 60.000 0.00 0.00 0.00 3.35
3490 3556 1.110442 CGCTCTCTCAGGGAGTTGAT 58.890 55.000 2.71 0.00 42.40 2.57
3491 3557 1.066908 CGCTCTCTCAGGGAGTTGATC 59.933 57.143 2.71 0.00 42.40 2.92
3492 3558 2.387757 GCTCTCTCAGGGAGTTGATCT 58.612 52.381 2.71 0.00 42.40 2.75
3494 3560 3.430651 GCTCTCTCAGGGAGTTGATCTTG 60.431 52.174 2.71 0.00 42.40 3.02
3497 3563 4.465660 TCTCTCAGGGAGTTGATCTTGAAG 59.534 45.833 0.00 0.00 42.40 3.02
3498 3564 3.517100 TCTCAGGGAGTTGATCTTGAAGG 59.483 47.826 0.00 0.00 0.00 3.46
3499 3565 2.573462 TCAGGGAGTTGATCTTGAAGGG 59.427 50.000 0.00 0.00 0.00 3.95
3500 3566 1.283321 AGGGAGTTGATCTTGAAGGGC 59.717 52.381 0.00 0.00 0.00 5.19
3509 3575 0.891373 TCTTGAAGGGCTGTCGAGAG 59.109 55.000 4.96 4.96 31.73 3.20
3513 3579 0.818296 GAAGGGCTGTCGAGAGCTTA 59.182 55.000 30.66 0.00 39.11 3.09
3515 3581 1.490574 AGGGCTGTCGAGAGCTTATT 58.509 50.000 30.66 13.28 39.11 1.40
3519 3585 2.468831 GCTGTCGAGAGCTTATTCTGG 58.531 52.381 25.99 0.00 35.95 3.86
3525 3591 0.914644 AGAGCTTATTCTGGCTGCCA 59.085 50.000 21.96 21.96 39.05 4.92
3526 3592 1.283029 AGAGCTTATTCTGGCTGCCAA 59.717 47.619 23.51 9.41 39.05 4.52
3527 3593 1.674962 GAGCTTATTCTGGCTGCCAAG 59.325 52.381 23.51 17.16 39.05 3.61
3530 3596 2.159324 GCTTATTCTGGCTGCCAAGAAC 60.159 50.000 25.35 14.80 30.80 3.01
3531 3597 2.128771 TATTCTGGCTGCCAAGAACC 57.871 50.000 25.35 0.25 30.80 3.62
3532 3598 0.112995 ATTCTGGCTGCCAAGAACCA 59.887 50.000 25.35 12.08 30.80 3.67
3533 3599 0.823356 TTCTGGCTGCCAAGAACCAC 60.823 55.000 23.51 0.00 30.80 4.16
3534 3600 2.594303 TGGCTGCCAAGAACCACG 60.594 61.111 21.08 0.00 0.00 4.94
3535 3601 2.281484 GGCTGCCAAGAACCACGA 60.281 61.111 15.17 0.00 0.00 4.35
3536 3602 2.328099 GGCTGCCAAGAACCACGAG 61.328 63.158 15.17 0.00 0.00 4.18
3537 3603 1.301716 GCTGCCAAGAACCACGAGA 60.302 57.895 0.00 0.00 0.00 4.04
3538 3604 1.569479 GCTGCCAAGAACCACGAGAC 61.569 60.000 0.00 0.00 0.00 3.36
3539 3605 0.249868 CTGCCAAGAACCACGAGACA 60.250 55.000 0.00 0.00 0.00 3.41
3544 3613 1.341531 CAAGAACCACGAGACAGGAGT 59.658 52.381 0.00 0.00 0.00 3.85
3558 3627 1.480137 CAGGAGTAGGAGGTCTGCAAG 59.520 57.143 0.00 0.00 0.00 4.01
3574 3643 0.609957 CAAGCCATGCACTCCCTCAA 60.610 55.000 0.00 0.00 0.00 3.02
3577 3646 0.322816 GCCATGCACTCCCTCAAGAA 60.323 55.000 0.00 0.00 0.00 2.52
3582 3651 4.706476 CCATGCACTCCCTCAAGAAAATAA 59.294 41.667 0.00 0.00 0.00 1.40
3583 3652 5.361857 CCATGCACTCCCTCAAGAAAATAAT 59.638 40.000 0.00 0.00 0.00 1.28
3585 3654 7.068593 CCATGCACTCCCTCAAGAAAATAATAA 59.931 37.037 0.00 0.00 0.00 1.40
3589 3658 9.561069 GCACTCCCTCAAGAAAATAATAATAGA 57.439 33.333 0.00 0.00 0.00 1.98
3598 3667 9.750125 CAAGAAAATAATAATAGAAGGTTGCCC 57.250 33.333 0.00 0.00 0.00 5.36
3599 3668 8.478775 AGAAAATAATAATAGAAGGTTGCCCC 57.521 34.615 0.00 0.00 0.00 5.80
3600 3669 8.065007 AGAAAATAATAATAGAAGGTTGCCCCA 58.935 33.333 0.00 0.00 34.66 4.96
3601 3670 8.616799 AAAATAATAATAGAAGGTTGCCCCAA 57.383 30.769 0.00 0.00 34.66 4.12
3602 3671 7.839680 AATAATAATAGAAGGTTGCCCCAAG 57.160 36.000 0.00 0.00 34.66 3.61
3603 3672 4.881157 ATAATAGAAGGTTGCCCCAAGT 57.119 40.909 0.00 0.00 34.66 3.16
3604 3673 3.542969 AATAGAAGGTTGCCCCAAGTT 57.457 42.857 0.00 0.00 34.66 2.66
3605 3674 2.579410 TAGAAGGTTGCCCCAAGTTC 57.421 50.000 0.00 0.00 34.66 3.01
3606 3675 0.178961 AGAAGGTTGCCCCAAGTTCC 60.179 55.000 0.00 0.00 34.66 3.62
3607 3676 0.178961 GAAGGTTGCCCCAAGTTCCT 60.179 55.000 0.00 0.00 34.66 3.36
3608 3677 0.469892 AAGGTTGCCCCAAGTTCCTG 60.470 55.000 0.00 0.00 34.66 3.86
3609 3678 1.152546 GGTTGCCCCAAGTTCCTGT 60.153 57.895 0.00 0.00 0.00 4.00
3610 3679 1.179174 GGTTGCCCCAAGTTCCTGTC 61.179 60.000 0.00 0.00 0.00 3.51
3611 3680 1.152830 TTGCCCCAAGTTCCTGTCC 59.847 57.895 0.00 0.00 0.00 4.02
3638 3715 0.178964 CTTCCTGTTGCCCTTTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
3651 3728 0.039618 TTTCCCATCCTCCCTGCAAC 59.960 55.000 0.00 0.00 0.00 4.17
3652 3729 2.124570 CCCATCCTCCCTGCAACG 60.125 66.667 0.00 0.00 0.00 4.10
3657 3734 3.710722 CCTCCCTGCAACGCCTCT 61.711 66.667 0.00 0.00 0.00 3.69
3664 3741 0.603707 CTGCAACGCCTCTTCCTTGA 60.604 55.000 0.00 0.00 0.00 3.02
3667 3744 1.878102 GCAACGCCTCTTCCTTGAAGA 60.878 52.381 6.39 6.39 45.01 2.87
3670 3747 1.208293 ACGCCTCTTCCTTGAAGATCC 59.792 52.381 6.97 1.62 45.84 3.36
3676 3753 4.041444 CCTCTTCCTTGAAGATCCTATGGG 59.959 50.000 6.97 0.00 45.84 4.00
3677 3754 4.895836 TCTTCCTTGAAGATCCTATGGGA 58.104 43.478 0.00 0.00 42.78 4.37
3678 3755 5.288687 TCTTCCTTGAAGATCCTATGGGAA 58.711 41.667 0.22 6.81 42.78 3.97
3679 3756 5.731187 TCTTCCTTGAAGATCCTATGGGAAA 59.269 40.000 0.22 0.00 42.78 3.13
3686 3763 4.713792 AGATCCTATGGGAAACATGGAC 57.286 45.455 0.22 0.00 45.78 4.02
3692 3769 0.687920 TGGGAAACATGGACACGCTA 59.312 50.000 0.00 0.00 0.00 4.26
3694 3771 1.338769 GGGAAACATGGACACGCTAGT 60.339 52.381 0.00 0.00 0.00 2.57
3695 3772 7.867392 TATGGGAAACATGGACACGCTAGTG 62.867 48.000 0.59 0.59 46.09 2.74
3711 3788 0.523966 AGTGCTTCTCTCGAACCTCG 59.476 55.000 0.00 0.00 42.10 4.63
3717 3794 1.027255 TCTCTCGAACCTCGCCTCTG 61.027 60.000 0.00 0.00 40.21 3.35
3729 3806 2.366533 TCGCCTCTGTCGAGAACTTAT 58.633 47.619 0.00 0.00 39.74 1.73
3735 3812 5.592054 CCTCTGTCGAGAACTTATGCATTA 58.408 41.667 3.54 0.00 39.74 1.90
3736 3813 6.042777 CCTCTGTCGAGAACTTATGCATTAA 58.957 40.000 3.54 0.00 39.74 1.40
3737 3814 6.703607 CCTCTGTCGAGAACTTATGCATTAAT 59.296 38.462 3.54 0.00 39.74 1.40
3746 3826 7.906327 AGAACTTATGCATTAATTGTTTGGGT 58.094 30.769 3.54 0.00 0.00 4.51
3761 3841 5.640147 TGTTTGGGTGAGGATTTAAGATGT 58.360 37.500 0.00 0.00 0.00 3.06
3779 3859 0.610232 GTGAGGGCCTGTTGCATCTT 60.610 55.000 12.95 0.00 43.89 2.40
3785 3865 2.436417 GGCCTGTTGCATCTTCTTACA 58.564 47.619 0.00 0.00 43.89 2.41
3838 3918 1.969923 CACCCCCAAATTCTTTGCTGA 59.030 47.619 0.00 0.00 39.31 4.26
3839 3919 2.568509 CACCCCCAAATTCTTTGCTGAT 59.431 45.455 0.00 0.00 39.31 2.90
3841 3921 3.008266 ACCCCCAAATTCTTTGCTGATTG 59.992 43.478 0.00 0.00 39.31 2.67
3853 3948 1.889105 CTGATTGGGATCCCGCACG 60.889 63.158 26.03 9.23 39.42 5.34
3887 3988 1.604593 GCAGCTGCTTCCTTTCCCA 60.605 57.895 31.33 0.00 38.21 4.37
3914 4015 1.472878 CAGGAACTCGAGACGGATGAA 59.527 52.381 21.68 0.00 34.60 2.57
3915 4016 1.746220 AGGAACTCGAGACGGATGAAG 59.254 52.381 21.68 0.00 0.00 3.02
3917 4018 2.520979 GAACTCGAGACGGATGAAGTG 58.479 52.381 21.68 0.00 0.00 3.16
3932 4033 0.984995 AAGTGGCAGGAGTCCTTACC 59.015 55.000 17.94 17.94 0.00 2.85
3981 4082 5.951747 TCCTCCCTCACCAAATTATCTTTTG 59.048 40.000 0.00 0.00 36.55 2.44
3983 4084 6.437162 CCTCCCTCACCAAATTATCTTTTGAA 59.563 38.462 0.00 0.00 38.58 2.69
3984 4085 7.227049 TCCCTCACCAAATTATCTTTTGAAC 57.773 36.000 0.00 0.00 38.58 3.18
4002 4103 3.279434 GAACACAACAAAGAGGTGGAGT 58.721 45.455 0.00 0.00 40.07 3.85
4009 4110 1.876156 CAAAGAGGTGGAGTGCTTCAC 59.124 52.381 2.06 2.06 34.10 3.18
4028 4129 1.077858 CAAGGAGCAAGAGGAGGCC 60.078 63.158 0.00 0.00 0.00 5.19
4042 4143 1.617839 AGGCCCTTTCCCTCCTCAG 60.618 63.158 0.00 0.00 0.00 3.35
4064 4165 0.548510 CCCTCCAGGACCTCCAATTC 59.451 60.000 0.00 0.00 38.24 2.17
4065 4166 0.548510 CCTCCAGGACCTCCAATTCC 59.451 60.000 0.00 0.00 38.89 3.01
4066 4167 1.289160 CTCCAGGACCTCCAATTCCA 58.711 55.000 0.00 0.00 38.89 3.53
4073 4174 1.073923 GACCTCCAATTCCAGTGGTGT 59.926 52.381 9.54 0.00 37.43 4.16
4074 4175 1.073923 ACCTCCAATTCCAGTGGTGTC 59.926 52.381 9.54 0.00 37.43 3.67
4126 4233 2.092429 ACAAGCTCACCAACCTCAAGAA 60.092 45.455 0.00 0.00 0.00 2.52
4131 4238 5.574188 AGCTCACCAACCTCAAGAAATTAT 58.426 37.500 0.00 0.00 0.00 1.28
4140 4247 7.340232 CCAACCTCAAGAAATTATTGATCTGGA 59.660 37.037 14.87 3.29 36.16 3.86
4142 4249 7.865820 ACCTCAAGAAATTATTGATCTGGAGA 58.134 34.615 12.18 0.00 41.75 3.71
4143 4250 7.772757 ACCTCAAGAAATTATTGATCTGGAGAC 59.227 37.037 12.18 0.00 41.75 3.36
4144 4251 7.228308 CCTCAAGAAATTATTGATCTGGAGACC 59.772 40.741 10.93 0.00 41.75 3.85
4146 4253 7.772292 TCAAGAAATTATTGATCTGGAGACCTG 59.228 37.037 0.00 0.00 31.86 4.00
4147 4254 6.599445 AGAAATTATTGATCTGGAGACCTGG 58.401 40.000 0.00 0.00 0.00 4.45
4156 4263 1.383803 GGAGACCTGGAGCCATCCT 60.384 63.158 0.00 0.00 46.80 3.24
4182 4289 2.892025 CCAAAGAATGGCCTCCCTG 58.108 57.895 3.32 0.00 43.80 4.45
4201 4308 0.390472 GGCTCGCTGCAAGAGTTAGT 60.390 55.000 17.02 0.00 45.15 2.24
4216 4323 3.585862 AGTTAGTTGTCGACGATTGCAT 58.414 40.909 9.14 0.00 0.00 3.96
4220 4327 2.413112 AGTTGTCGACGATTGCATCAAG 59.587 45.455 9.14 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.279120 CGAGCTCGTCCTGGATGC 60.279 66.667 27.79 10.54 34.11 3.91
1 2 1.064946 GTCGAGCTCGTCCTGGATG 59.935 63.158 33.33 9.73 40.80 3.51
2 3 2.473760 CGTCGAGCTCGTCCTGGAT 61.474 63.158 33.33 0.00 40.80 3.41
3 4 3.125573 CGTCGAGCTCGTCCTGGA 61.126 66.667 33.33 12.48 40.80 3.86
4 5 4.180946 CCGTCGAGCTCGTCCTGG 62.181 72.222 33.33 24.94 40.80 4.45
5 6 4.838486 GCCGTCGAGCTCGTCCTG 62.838 72.222 33.33 21.14 40.80 3.86
10 11 4.421479 AAGGTGCCGTCGAGCTCG 62.421 66.667 30.03 30.03 41.45 5.03
11 12 2.507324 GAAGGTGCCGTCGAGCTC 60.507 66.667 2.73 2.73 0.00 4.09
16 17 2.504244 GTCTCGAAGGTGCCGTCG 60.504 66.667 17.96 17.96 46.22 5.12
17 18 2.126031 GGTCTCGAAGGTGCCGTC 60.126 66.667 0.00 0.00 0.00 4.79
18 19 4.052229 CGGTCTCGAAGGTGCCGT 62.052 66.667 0.00 0.00 39.00 5.68
22 23 3.744719 TCGGCGGTCTCGAAGGTG 61.745 66.667 7.21 0.00 39.00 4.00
23 24 3.745803 GTCGGCGGTCTCGAAGGT 61.746 66.667 7.21 0.00 38.42 3.50
24 25 4.493747 GGTCGGCGGTCTCGAAGG 62.494 72.222 7.21 0.00 38.42 3.46
25 26 3.744719 TGGTCGGCGGTCTCGAAG 61.745 66.667 7.21 0.00 38.42 3.79
26 27 4.047059 GTGGTCGGCGGTCTCGAA 62.047 66.667 7.21 0.00 38.42 3.71
29 30 4.773117 GTCGTGGTCGGCGGTCTC 62.773 72.222 7.21 0.00 37.69 3.36
51 52 3.199891 GGTTATGGACGCACCCGC 61.200 66.667 0.00 0.00 38.22 6.13
52 53 1.078708 AAGGTTATGGACGCACCCG 60.079 57.895 0.00 0.00 38.00 5.28
53 54 0.322187 ACAAGGTTATGGACGCACCC 60.322 55.000 0.00 0.00 38.00 4.61
54 55 1.084289 GACAAGGTTATGGACGCACC 58.916 55.000 0.00 0.00 39.54 5.01
55 56 1.084289 GGACAAGGTTATGGACGCAC 58.916 55.000 0.00 0.00 0.00 5.34
56 57 0.390603 CGGACAAGGTTATGGACGCA 60.391 55.000 0.00 0.00 0.00 5.24
57 58 1.702491 GCGGACAAGGTTATGGACGC 61.702 60.000 0.00 0.00 40.43 5.19
58 59 1.418342 CGCGGACAAGGTTATGGACG 61.418 60.000 0.00 0.00 0.00 4.79
59 60 0.108520 TCGCGGACAAGGTTATGGAC 60.109 55.000 6.13 0.00 0.00 4.02
60 61 0.828022 ATCGCGGACAAGGTTATGGA 59.172 50.000 6.13 0.00 0.00 3.41
61 62 0.937304 CATCGCGGACAAGGTTATGG 59.063 55.000 6.13 0.00 0.00 2.74
62 63 0.304705 GCATCGCGGACAAGGTTATG 59.695 55.000 6.13 0.00 0.00 1.90
63 64 0.178068 AGCATCGCGGACAAGGTTAT 59.822 50.000 6.13 0.00 0.00 1.89
64 65 0.459585 GAGCATCGCGGACAAGGTTA 60.460 55.000 6.13 0.00 0.00 2.85
65 66 1.741770 GAGCATCGCGGACAAGGTT 60.742 57.895 6.13 0.00 0.00 3.50
66 67 2.125512 GAGCATCGCGGACAAGGT 60.126 61.111 6.13 0.00 0.00 3.50
85 86 2.102946 GCAGCTTTGGCCGTATGC 59.897 61.111 0.00 2.66 39.73 3.14
86 87 2.800736 GGCAGCTTTGGCCGTATG 59.199 61.111 0.00 0.00 42.39 2.39
92 93 4.729856 CTTGGCGGCAGCTTTGGC 62.730 66.667 12.87 0.00 44.37 4.52
93 94 4.729856 GCTTGGCGGCAGCTTTGG 62.730 66.667 20.58 7.62 44.37 3.28
94 95 3.677648 AGCTTGGCGGCAGCTTTG 61.678 61.111 23.43 10.57 45.82 2.77
95 96 3.677648 CAGCTTGGCGGCAGCTTT 61.678 61.111 25.50 10.13 45.82 3.51
106 107 3.045142 CCACACCCAAGCAGCTTG 58.955 61.111 26.03 26.03 40.75 4.01
107 108 2.914097 GCCACACCCAAGCAGCTT 60.914 61.111 0.21 0.21 0.00 3.74
108 109 3.857309 GAGCCACACCCAAGCAGCT 62.857 63.158 0.00 0.00 0.00 4.24
109 110 3.368571 GAGCCACACCCAAGCAGC 61.369 66.667 0.00 0.00 0.00 5.25
110 111 3.052082 CGAGCCACACCCAAGCAG 61.052 66.667 0.00 0.00 0.00 4.24
111 112 3.872603 ACGAGCCACACCCAAGCA 61.873 61.111 0.00 0.00 0.00 3.91
112 113 3.357079 CACGAGCCACACCCAAGC 61.357 66.667 0.00 0.00 0.00 4.01
113 114 3.357079 GCACGAGCCACACCCAAG 61.357 66.667 0.00 0.00 33.58 3.61
114 115 3.825160 GAGCACGAGCCACACCCAA 62.825 63.158 0.00 0.00 43.56 4.12
115 116 4.314440 GAGCACGAGCCACACCCA 62.314 66.667 0.00 0.00 43.56 4.51
116 117 3.612247 ATGAGCACGAGCCACACCC 62.612 63.158 0.00 0.00 43.56 4.61
117 118 2.046892 ATGAGCACGAGCCACACC 60.047 61.111 0.00 0.00 43.56 4.16
118 119 1.079543 AGATGAGCACGAGCCACAC 60.080 57.895 0.00 0.00 43.56 3.82
119 120 1.079612 CAGATGAGCACGAGCCACA 60.080 57.895 0.00 2.92 43.56 4.17
120 121 2.459442 GCAGATGAGCACGAGCCAC 61.459 63.158 0.00 0.00 43.56 5.01
121 122 2.125391 GCAGATGAGCACGAGCCA 60.125 61.111 0.00 0.00 43.56 4.75
122 123 2.172372 CAGCAGATGAGCACGAGCC 61.172 63.158 0.00 0.00 43.56 4.70
123 124 2.811066 GCAGCAGATGAGCACGAGC 61.811 63.158 0.00 0.00 42.56 5.03
124 125 1.153608 AGCAGCAGATGAGCACGAG 60.154 57.895 0.00 0.00 36.85 4.18
125 126 1.447314 CAGCAGCAGATGAGCACGA 60.447 57.895 0.00 0.00 36.85 4.35
126 127 3.090656 CAGCAGCAGATGAGCACG 58.909 61.111 0.00 0.00 36.85 5.34
127 128 2.792599 GCAGCAGCAGATGAGCAC 59.207 61.111 0.00 0.00 41.58 4.40
137 138 0.603707 TAAGTGTCACCTGCAGCAGC 60.604 55.000 17.81 3.76 42.57 5.25
138 139 1.151668 GTAAGTGTCACCTGCAGCAG 58.848 55.000 16.23 16.23 0.00 4.24
139 140 0.467804 TGTAAGTGTCACCTGCAGCA 59.532 50.000 8.66 0.00 0.00 4.41
140 141 1.593196 TTGTAAGTGTCACCTGCAGC 58.407 50.000 8.66 0.00 0.00 5.25
141 142 2.290641 GGTTTGTAAGTGTCACCTGCAG 59.709 50.000 6.78 6.78 0.00 4.41
142 143 2.092646 AGGTTTGTAAGTGTCACCTGCA 60.093 45.455 0.00 0.00 36.46 4.41
143 144 2.290641 CAGGTTTGTAAGTGTCACCTGC 59.709 50.000 3.79 0.00 46.08 4.85
145 146 4.102524 TCATCAGGTTTGTAAGTGTCACCT 59.897 41.667 0.00 0.00 38.46 4.00
146 147 4.385825 TCATCAGGTTTGTAAGTGTCACC 58.614 43.478 0.00 0.00 0.00 4.02
147 148 5.057149 ACTCATCAGGTTTGTAAGTGTCAC 58.943 41.667 0.00 0.00 0.00 3.67
148 149 5.163353 TGACTCATCAGGTTTGTAAGTGTCA 60.163 40.000 0.00 0.00 0.00 3.58
149 150 5.297547 TGACTCATCAGGTTTGTAAGTGTC 58.702 41.667 0.00 0.00 0.00 3.67
150 151 5.290493 TGACTCATCAGGTTTGTAAGTGT 57.710 39.130 0.00 0.00 0.00 3.55
151 152 5.391310 GCATGACTCATCAGGTTTGTAAGTG 60.391 44.000 0.00 0.00 38.91 3.16
152 153 4.697352 GCATGACTCATCAGGTTTGTAAGT 59.303 41.667 0.00 0.00 38.91 2.24
153 154 4.696877 TGCATGACTCATCAGGTTTGTAAG 59.303 41.667 0.00 0.00 38.91 2.34
154 155 4.650734 TGCATGACTCATCAGGTTTGTAA 58.349 39.130 0.00 0.00 38.91 2.41
155 156 4.284829 TGCATGACTCATCAGGTTTGTA 57.715 40.909 0.00 0.00 38.91 2.41
156 157 3.144657 TGCATGACTCATCAGGTTTGT 57.855 42.857 0.00 0.00 38.91 2.83
157 158 3.442625 ACATGCATGACTCATCAGGTTTG 59.557 43.478 32.75 2.21 38.91 2.93
158 159 3.442625 CACATGCATGACTCATCAGGTTT 59.557 43.478 32.75 2.54 38.91 3.27
159 160 3.014623 CACATGCATGACTCATCAGGTT 58.985 45.455 32.75 2.76 38.91 3.50
160 161 2.640184 CACATGCATGACTCATCAGGT 58.360 47.619 32.75 3.33 38.91 4.00
161 162 1.333931 GCACATGCATGACTCATCAGG 59.666 52.381 32.75 10.70 38.57 3.86
189 190 2.104530 GAGTACGGGAAGCGAGCC 59.895 66.667 0.00 0.00 0.00 4.70
190 191 1.709147 TACGAGTACGGGAAGCGAGC 61.709 60.000 0.00 0.00 44.46 5.03
196 197 1.305219 CGGTGGTACGAGTACGGGAA 61.305 60.000 7.24 0.00 44.46 3.97
203 204 2.337532 GTGCACGGTGGTACGAGT 59.662 61.111 10.60 0.00 37.61 4.18
216 217 0.522626 TCGATTACCGAAGTCGTGCA 59.477 50.000 0.00 0.00 45.43 4.57
217 218 3.317608 TCGATTACCGAAGTCGTGC 57.682 52.632 0.00 0.00 45.43 5.34
232 233 2.088423 GAAGAAGAGCAGAGGAGTCGA 58.912 52.381 0.00 0.00 0.00 4.20
236 237 5.240183 CAGATAGAGAAGAAGAGCAGAGGAG 59.760 48.000 0.00 0.00 0.00 3.69
257 258 7.924947 GTCACTATCATCATCTTCATGAACAGA 59.075 37.037 3.38 1.28 42.53 3.41
277 278 6.568653 GCTTGCTATCATCACTATCGTCACTA 60.569 42.308 0.00 0.00 0.00 2.74
278 279 5.767269 CTTGCTATCATCACTATCGTCACT 58.233 41.667 0.00 0.00 0.00 3.41
279 280 4.384247 GCTTGCTATCATCACTATCGTCAC 59.616 45.833 0.00 0.00 0.00 3.67
280 281 4.037923 TGCTTGCTATCATCACTATCGTCA 59.962 41.667 0.00 0.00 0.00 4.35
281 282 4.550422 TGCTTGCTATCATCACTATCGTC 58.450 43.478 0.00 0.00 0.00 4.20
282 283 4.590850 TGCTTGCTATCATCACTATCGT 57.409 40.909 0.00 0.00 0.00 3.73
283 284 4.201695 GCATGCTTGCTATCATCACTATCG 60.202 45.833 16.80 0.00 45.77 2.92
284 285 5.219226 GCATGCTTGCTATCATCACTATC 57.781 43.478 16.80 0.00 45.77 2.08
298 299 1.202698 GGTACTCTAGGGGCATGCTTG 60.203 57.143 18.92 0.00 0.00 4.01
315 322 6.152661 CACCCTATCAAATTTCAGCTTTGGTA 59.847 38.462 0.00 0.00 34.95 3.25
323 330 4.261801 ACGTCCACCCTATCAAATTTCAG 58.738 43.478 0.00 0.00 0.00 3.02
350 357 2.369600 CGCGATGCATTTCATTCTGAC 58.630 47.619 0.00 0.00 35.05 3.51
351 358 1.331447 CCGCGATGCATTTCATTCTGA 59.669 47.619 8.23 0.00 35.05 3.27
352 359 1.331447 TCCGCGATGCATTTCATTCTG 59.669 47.619 8.23 0.00 35.05 3.02
370 377 0.323957 ACAGGGGCTTTAGTTCGTCC 59.676 55.000 0.00 0.00 0.00 4.79
373 380 1.156736 CACACAGGGGCTTTAGTTCG 58.843 55.000 0.00 0.00 0.00 3.95
422 429 0.171455 GTACTGACAGAGCCCGACAG 59.829 60.000 10.08 0.00 35.14 3.51
438 445 2.648426 GCAGTAATCGTAGCTCGGTAC 58.352 52.381 0.00 1.38 40.32 3.34
440 447 0.029035 CGCAGTAATCGTAGCTCGGT 59.971 55.000 0.00 0.00 40.32 4.69
451 458 5.357257 CCAATACCACTAGAACGCAGTAAT 58.643 41.667 0.00 0.00 45.00 1.89
458 465 3.938963 ACATTGCCAATACCACTAGAACG 59.061 43.478 0.00 0.00 0.00 3.95
474 481 2.939103 CTACCTGTAGAGGCAACATTGC 59.061 50.000 5.68 8.11 44.33 3.56
475 482 4.184629 GTCTACCTGTAGAGGCAACATTG 58.815 47.826 5.68 0.00 44.33 2.82
491 501 2.169978 GTGAGGTGGTTATGGGTCTACC 59.830 54.545 0.00 0.00 40.81 3.18
529 539 3.896854 GGGTTCCCTCCCATACAAC 57.103 57.895 0.00 0.00 46.30 3.32
565 575 8.655651 TGTATTCATCGTTTGTAATATGCTCA 57.344 30.769 0.00 0.00 0.00 4.26
597 607 2.951229 AGGGATGACCGTGAGTTTTT 57.049 45.000 0.00 0.00 46.96 1.94
599 609 4.099573 CACTATAGGGATGACCGTGAGTTT 59.900 45.833 4.43 0.00 46.96 2.66
601 611 3.223435 CACTATAGGGATGACCGTGAGT 58.777 50.000 4.43 0.00 46.96 3.41
622 632 3.178611 CCTATGCCCCCAGGACCC 61.179 72.222 0.00 0.00 33.42 4.46
667 677 4.702612 TGGTCTTGCACTTCTTTGTTGTTA 59.297 37.500 0.00 0.00 0.00 2.41
672 682 4.402155 TGAAATGGTCTTGCACTTCTTTGT 59.598 37.500 0.00 0.00 0.00 2.83
688 698 5.296748 ACCCAAACTCGAATTTTGAAATGG 58.703 37.500 16.97 12.66 36.24 3.16
700 710 4.954202 AGAGATACACATACCCAAACTCGA 59.046 41.667 0.00 0.00 0.00 4.04
701 711 5.263968 AGAGATACACATACCCAAACTCG 57.736 43.478 0.00 0.00 0.00 4.18
712 722 6.591834 GCACACTAAAGTCAAGAGATACACAT 59.408 38.462 0.00 0.00 0.00 3.21
722 732 7.072030 GTCAACTTATGCACACTAAAGTCAAG 58.928 38.462 0.00 0.00 31.15 3.02
778 788 4.209288 TCTGCTTTCTCTTTTTCGTCTTCG 59.791 41.667 0.00 0.00 38.55 3.79
784 797 6.183360 CCTCACTATCTGCTTTCTCTTTTTCG 60.183 42.308 0.00 0.00 0.00 3.46
785 798 6.652900 ACCTCACTATCTGCTTTCTCTTTTTC 59.347 38.462 0.00 0.00 0.00 2.29
790 803 3.118811 GCACCTCACTATCTGCTTTCTCT 60.119 47.826 0.00 0.00 0.00 3.10
793 806 2.977914 TGCACCTCACTATCTGCTTTC 58.022 47.619 0.00 0.00 0.00 2.62
804 817 2.084546 GGTCCAAGTTATGCACCTCAC 58.915 52.381 0.00 0.00 0.00 3.51
811 824 4.072131 TCTGAAGTTGGTCCAAGTTATGC 58.928 43.478 22.19 12.18 37.16 3.14
814 827 8.754991 TTAATTTCTGAAGTTGGTCCAAGTTA 57.245 30.769 22.19 8.98 37.16 2.24
912 926 8.421002 TGAAAGGGAACTAAAAATCTTTTCCAG 58.579 33.333 0.00 0.00 42.68 3.86
939 953 2.031944 GTCACCGTTTCCTTGCTCTTTC 60.032 50.000 0.00 0.00 0.00 2.62
960 974 6.128172 GGAATCTAGTTGTGACCAGAATTGTG 60.128 42.308 0.00 0.00 27.42 3.33
969 983 4.020128 ACCTCAAGGAATCTAGTTGTGACC 60.020 45.833 2.30 0.00 38.94 4.02
979 993 5.435291 CATTTCAGCTACCTCAAGGAATCT 58.565 41.667 2.30 0.00 38.94 2.40
1012 1026 8.062536 ACCTTCTAGATGTACTGGTTTATCTCT 58.937 37.037 0.00 0.00 32.54 3.10
1044 1058 4.586306 AAGGGTCCAATATTCTTTCGGT 57.414 40.909 0.00 0.00 0.00 4.69
1061 1075 5.466393 CCAAAAACACATGCTAGAAAAAGGG 59.534 40.000 0.00 0.00 0.00 3.95
1085 1099 9.425893 CATCATTATTTCGTTGATTAGTGTCAC 57.574 33.333 0.00 0.00 0.00 3.67
1089 1103 9.986833 TTGTCATCATTATTTCGTTGATTAGTG 57.013 29.630 0.00 0.00 0.00 2.74
1200 1214 8.533569 TTGTCCAGTGATCTACAGATATGTTA 57.466 34.615 0.00 0.00 34.37 2.41
1203 1217 7.014134 ACTCTTGTCCAGTGATCTACAGATATG 59.986 40.741 0.00 0.00 34.37 1.78
1262 1277 3.005554 GCAGGCATAATATCGTGCTCAT 58.994 45.455 10.87 0.00 41.04 2.90
1266 1281 3.189080 TCAATGCAGGCATAATATCGTGC 59.811 43.478 7.26 4.20 42.43 5.34
1269 1284 6.005583 ACTTTCAATGCAGGCATAATATCG 57.994 37.500 7.26 0.00 35.31 2.92
1281 1296 6.538742 GGTAGTCATAGCTAACTTTCAATGCA 59.461 38.462 3.47 0.00 0.00 3.96
1291 1306 7.705752 GTGAAAAGGTAGGTAGTCATAGCTAAC 59.294 40.741 0.00 2.13 45.92 2.34
1308 1323 3.457610 CATTGTTGCAGGTGAAAAGGT 57.542 42.857 0.00 0.00 0.00 3.50
1336 1352 3.631686 TCTTCCGGAAATAATGCACATGG 59.368 43.478 19.39 1.46 0.00 3.66
1338 1354 6.545666 TGTAATCTTCCGGAAATAATGCACAT 59.454 34.615 19.39 0.13 0.00 3.21
1383 1399 6.655003 TGTCAAGTCCTATCCAAAAGTGAATC 59.345 38.462 0.00 0.00 0.00 2.52
1392 1408 8.375506 GGATGTATAATGTCAAGTCCTATCCAA 58.624 37.037 0.00 0.00 31.78 3.53
1449 1465 0.958091 CATTCAAGTTGTTCCGCCCA 59.042 50.000 2.11 0.00 0.00 5.36
1496 1513 5.308497 TGTTTACCTGAATCACCTGTTCCTA 59.692 40.000 0.00 0.00 0.00 2.94
1499 1516 5.063880 AGTGTTTACCTGAATCACCTGTTC 58.936 41.667 0.00 0.00 38.15 3.18
1542 1559 5.521372 GGAAACCTTCAATGCTAAATCATGC 59.479 40.000 0.00 0.00 0.00 4.06
1575 1592 7.067737 GGGCTAGAGGAAGATATATGTAGACAC 59.932 44.444 0.00 0.00 0.00 3.67
1593 1610 2.660572 TCTACAGCTCTTGGGCTAGAG 58.339 52.381 11.28 11.28 43.66 2.43
1607 1624 5.633830 AACAGATGGTGCAATTTCTACAG 57.366 39.130 0.00 0.00 0.00 2.74
1629 1646 7.179516 TCACTCATACTAATGGACAAGTGGTAA 59.820 37.037 0.00 0.00 36.01 2.85
1660 1677 5.191522 TGACAATTCCATCCTCACTATTGGA 59.808 40.000 0.00 0.00 36.49 3.53
1663 1680 7.405292 TCTTTGACAATTCCATCCTCACTATT 58.595 34.615 0.00 0.00 0.00 1.73
1715 1732 8.286097 GGTTCTCAGTTTTCAGTATCTTTCTTG 58.714 37.037 0.00 0.00 0.00 3.02
1719 1736 7.599245 CGTAGGTTCTCAGTTTTCAGTATCTTT 59.401 37.037 0.00 0.00 0.00 2.52
1722 1739 5.288952 GCGTAGGTTCTCAGTTTTCAGTATC 59.711 44.000 0.00 0.00 0.00 2.24
1731 1750 3.131396 CAAAGTGCGTAGGTTCTCAGTT 58.869 45.455 0.00 0.00 0.00 3.16
1732 1751 2.364324 TCAAAGTGCGTAGGTTCTCAGT 59.636 45.455 0.00 0.00 0.00 3.41
1733 1752 3.026630 TCAAAGTGCGTAGGTTCTCAG 57.973 47.619 0.00 0.00 0.00 3.35
1741 1760 3.974401 CCAAACAACATCAAAGTGCGTAG 59.026 43.478 0.00 0.00 0.00 3.51
1743 1762 2.425312 TCCAAACAACATCAAAGTGCGT 59.575 40.909 0.00 0.00 0.00 5.24
1765 1784 4.201523 GCGAACAAAGCTTGCATTGTAATC 60.202 41.667 15.01 9.91 38.75 1.75
1767 1786 3.049206 GCGAACAAAGCTTGCATTGTAA 58.951 40.909 15.01 0.00 38.75 2.41
1770 1789 1.489574 TGCGAACAAAGCTTGCATTG 58.510 45.000 0.00 8.71 35.28 2.82
1771 1790 2.443887 ATGCGAACAAAGCTTGCATT 57.556 40.000 13.75 3.03 43.24 3.56
1821 1840 4.884458 TGACAAATAGACAACACGCAAA 57.116 36.364 0.00 0.00 0.00 3.68
1833 1852 8.514594 ACATGGTAGAACATTGTTGACAAATAG 58.485 33.333 6.80 0.00 39.55 1.73
1850 1869 6.318648 GTGCAATAGAAATTCCACATGGTAGA 59.681 38.462 0.00 0.00 34.44 2.59
1856 1875 6.594788 AGTTGTGCAATAGAAATTCCACAT 57.405 33.333 3.57 0.00 42.07 3.21
1863 1882 6.325919 TCCGAAAAGTTGTGCAATAGAAAT 57.674 33.333 0.00 0.00 0.00 2.17
1865 1884 5.705441 AGATCCGAAAAGTTGTGCAATAGAA 59.295 36.000 0.00 0.00 0.00 2.10
1885 1904 2.288518 GGTAGCGGAGATGGACAAGATC 60.289 54.545 0.00 0.00 0.00 2.75
1887 1906 1.112113 GGTAGCGGAGATGGACAAGA 58.888 55.000 0.00 0.00 0.00 3.02
1936 1955 6.691255 TGGTATACTCTTTGGTACCTGTTT 57.309 37.500 14.36 2.84 37.92 2.83
1941 1960 8.803397 AAAATCTTGGTATACTCTTTGGTACC 57.197 34.615 4.43 4.43 37.65 3.34
1957 1976 6.378280 AGCACCCTTAACTGATAAAATCTTGG 59.622 38.462 0.00 0.00 0.00 3.61
1999 2018 2.159627 CGTGCAAACTATGAACACCCTC 59.840 50.000 0.00 0.00 37.44 4.30
2006 2025 5.335583 CCCATTTCTTCGTGCAAACTATGAA 60.336 40.000 0.00 0.00 0.00 2.57
2018 2037 4.094830 ACAAGGTTACCCATTTCTTCGT 57.905 40.909 0.00 0.00 0.00 3.85
2021 2040 7.659799 GCAATTTTACAAGGTTACCCATTTCTT 59.340 33.333 0.00 0.00 0.00 2.52
2025 2044 5.474825 CGCAATTTTACAAGGTTACCCATT 58.525 37.500 0.00 0.00 0.00 3.16
2030 2049 3.903360 TGGCGCAATTTTACAAGGTTAC 58.097 40.909 10.83 0.00 0.00 2.50
2107 2147 8.996024 AATCTCTTTAGCTCTTGTAAGTTCTC 57.004 34.615 0.00 0.00 0.00 2.87
2134 2174 9.845740 AAACCCATTACTTTCTTGCTTAATTTT 57.154 25.926 0.00 0.00 0.00 1.82
2137 2177 8.189119 TCAAACCCATTACTTTCTTGCTTAAT 57.811 30.769 0.00 0.00 0.00 1.40
2141 2181 6.670695 ATTCAAACCCATTACTTTCTTGCT 57.329 33.333 0.00 0.00 0.00 3.91
2144 2184 9.942850 CCATTAATTCAAACCCATTACTTTCTT 57.057 29.630 0.00 0.00 0.00 2.52
2153 2193 4.406649 CCAGCTCCATTAATTCAAACCCAT 59.593 41.667 0.00 0.00 0.00 4.00
2157 2197 4.023291 TCCCCAGCTCCATTAATTCAAAC 58.977 43.478 0.00 0.00 0.00 2.93
2164 2204 4.108570 TCTAGTTTCCCCAGCTCCATTAA 58.891 43.478 0.00 0.00 0.00 1.40
2168 2208 1.909302 CTTCTAGTTTCCCCAGCTCCA 59.091 52.381 0.00 0.00 0.00 3.86
2191 2231 5.128919 GCAAATGTGAAGTGATCCTCCTAT 58.871 41.667 0.00 0.00 0.00 2.57
2206 2246 5.849081 GTGCATTTTCAAGATTGCAAATGTG 59.151 36.000 22.63 1.45 46.37 3.21
2207 2247 5.761234 AGTGCATTTTCAAGATTGCAAATGT 59.239 32.000 22.63 8.54 46.37 2.71
2213 2253 4.487948 TGCTAGTGCATTTTCAAGATTGC 58.512 39.130 0.00 0.00 45.31 3.56
2230 2270 2.286831 CCTCATGCGCTTCATTTGCTAG 60.287 50.000 9.73 0.00 31.79 3.42
2241 2281 0.607489 AGAGTTTTGCCTCATGCGCT 60.607 50.000 9.73 0.00 45.60 5.92
2244 2284 2.729156 GCGTAAGAGTTTTGCCTCATGC 60.729 50.000 0.00 0.00 43.02 4.06
2281 2321 6.347725 CCTTTCTTCCAACTGAGTGTTAATCG 60.348 42.308 0.00 0.00 37.07 3.34
2282 2322 6.568653 GCCTTTCTTCCAACTGAGTGTTAATC 60.569 42.308 0.00 0.00 37.07 1.75
2302 2342 1.002773 ACTCGTATTTGACCGGCCTTT 59.997 47.619 0.00 0.00 0.00 3.11
2310 2350 3.482722 TCGTCAGGACTCGTATTTGAC 57.517 47.619 0.00 0.00 35.88 3.18
2313 2353 4.458295 TCTTCTTCGTCAGGACTCGTATTT 59.542 41.667 0.00 0.00 0.00 1.40
2318 2358 2.420372 TGATCTTCTTCGTCAGGACTCG 59.580 50.000 0.00 0.00 0.00 4.18
2330 2370 6.956497 AGCCTCTCAAGTAATTGATCTTCTT 58.044 36.000 6.00 0.00 0.00 2.52
2461 2501 0.173481 CAAGCTACGCTGTCTAGGCA 59.827 55.000 0.00 0.00 39.62 4.75
2482 2522 3.531821 CAAGGGGTGGAAGGTGTTT 57.468 52.632 0.00 0.00 0.00 2.83
2518 2558 3.119459 TCACGCTCTTCTACAGATTGACC 60.119 47.826 0.00 0.00 0.00 4.02
2519 2559 4.098055 TCACGCTCTTCTACAGATTGAC 57.902 45.455 0.00 0.00 0.00 3.18
2520 2560 3.759086 ACTCACGCTCTTCTACAGATTGA 59.241 43.478 0.00 0.00 0.00 2.57
2521 2561 4.101942 GACTCACGCTCTTCTACAGATTG 58.898 47.826 0.00 0.00 0.00 2.67
2522 2562 4.013728 AGACTCACGCTCTTCTACAGATT 58.986 43.478 0.00 0.00 0.00 2.40
2523 2563 3.376859 CAGACTCACGCTCTTCTACAGAT 59.623 47.826 0.00 0.00 0.00 2.90
2524 2564 2.744741 CAGACTCACGCTCTTCTACAGA 59.255 50.000 0.00 0.00 0.00 3.41
2525 2565 2.159448 CCAGACTCACGCTCTTCTACAG 60.159 54.545 0.00 0.00 0.00 2.74
2526 2566 1.813178 CCAGACTCACGCTCTTCTACA 59.187 52.381 0.00 0.00 0.00 2.74
2527 2567 2.085320 TCCAGACTCACGCTCTTCTAC 58.915 52.381 0.00 0.00 0.00 2.59
2528 2568 2.027100 TCTCCAGACTCACGCTCTTCTA 60.027 50.000 0.00 0.00 0.00 2.10
2529 2569 1.173043 CTCCAGACTCACGCTCTTCT 58.827 55.000 0.00 0.00 0.00 2.85
2530 2570 1.169577 TCTCCAGACTCACGCTCTTC 58.830 55.000 0.00 0.00 0.00 2.87
2531 2571 1.543802 CTTCTCCAGACTCACGCTCTT 59.456 52.381 0.00 0.00 0.00 2.85
2532 2572 1.173043 CTTCTCCAGACTCACGCTCT 58.827 55.000 0.00 0.00 0.00 4.09
2533 2573 1.132262 CTCTTCTCCAGACTCACGCTC 59.868 57.143 0.00 0.00 0.00 5.03
2534 2574 1.173043 CTCTTCTCCAGACTCACGCT 58.827 55.000 0.00 0.00 0.00 5.07
2535 2575 0.885196 ACTCTTCTCCAGACTCACGC 59.115 55.000 0.00 0.00 0.00 5.34
2555 2595 0.961019 GCCTGTGATGCAACTGGAAA 59.039 50.000 16.28 0.00 40.60 3.13
2558 2598 2.345760 GGGCCTGTGATGCAACTGG 61.346 63.158 0.84 9.48 40.97 4.00
2559 2599 0.968901 ATGGGCCTGTGATGCAACTG 60.969 55.000 4.53 0.00 0.00 3.16
2560 2600 0.968901 CATGGGCCTGTGATGCAACT 60.969 55.000 4.53 0.00 0.00 3.16
2575 2618 5.344933 GCCTTTTTAAGTTACGAAAGCATGG 59.655 40.000 10.43 0.00 0.00 3.66
2592 2635 6.518369 GCAACCCAATTAGTTCTAGCCTTTTT 60.518 38.462 0.00 0.00 0.00 1.94
2625 2668 5.574188 ACTTCATTTGCTACCCATCTTCTT 58.426 37.500 0.00 0.00 0.00 2.52
2628 2671 6.029346 CAAACTTCATTTGCTACCCATCTT 57.971 37.500 0.00 0.00 41.30 2.40
2676 2719 3.378427 GGCAATCCTTCACAATGAGTACC 59.622 47.826 0.00 0.00 0.00 3.34
2683 2726 2.827921 GTTCAGGGCAATCCTTCACAAT 59.172 45.455 0.00 0.00 45.47 2.71
2693 2736 4.373156 AACTCAGTTAGTTCAGGGCAAT 57.627 40.909 0.00 0.00 45.64 3.56
2739 2782 4.733077 TGAATCTGTTTCCAAGGGGTAA 57.267 40.909 0.00 0.00 33.04 2.85
2747 2790 4.717877 AGTCACACATGAATCTGTTTCCA 58.282 39.130 0.00 0.00 36.31 3.53
2753 2796 5.443185 AAACCAAGTCACACATGAATCTG 57.557 39.130 0.00 0.00 36.31 2.90
2759 2802 3.753272 CCTAGGAAACCAAGTCACACATG 59.247 47.826 1.05 0.00 0.00 3.21
2760 2803 3.810743 GCCTAGGAAACCAAGTCACACAT 60.811 47.826 14.75 0.00 0.00 3.21
2761 2804 2.486548 GCCTAGGAAACCAAGTCACACA 60.487 50.000 14.75 0.00 0.00 3.72
2762 2805 2.152016 GCCTAGGAAACCAAGTCACAC 58.848 52.381 14.75 0.00 0.00 3.82
2787 2830 4.142403 CGGCAATCCTCAATTTTAAGCTCA 60.142 41.667 0.00 0.00 0.00 4.26
2788 2831 4.096382 TCGGCAATCCTCAATTTTAAGCTC 59.904 41.667 0.00 0.00 0.00 4.09
2789 2832 4.016444 TCGGCAATCCTCAATTTTAAGCT 58.984 39.130 0.00 0.00 0.00 3.74
2791 2834 5.576774 GGTTTCGGCAATCCTCAATTTTAAG 59.423 40.000 0.00 0.00 0.00 1.85
2810 2853 1.604278 GAGGCAGTGACAACAGGTTTC 59.396 52.381 0.00 0.00 0.00 2.78
2814 2857 0.976641 TAGGAGGCAGTGACAACAGG 59.023 55.000 0.00 0.00 0.00 4.00
2817 2860 2.237392 AGGAATAGGAGGCAGTGACAAC 59.763 50.000 0.00 0.00 0.00 3.32
2823 2866 5.540719 GTCACTATAAGGAATAGGAGGCAGT 59.459 44.000 0.00 0.00 41.78 4.40
2845 2888 2.348591 GTGTAACAGAGCACAAAGCGTC 60.349 50.000 0.00 0.00 43.23 5.19
2848 2891 2.872245 TCAGTGTAACAGAGCACAAAGC 59.128 45.455 0.00 0.00 41.43 3.51
2864 2907 0.104120 TCTTCCCACACGTGTCAGTG 59.896 55.000 20.49 7.63 46.83 3.66
2869 2912 0.759436 AGACCTCTTCCCACACGTGT 60.759 55.000 17.22 17.22 0.00 4.49
2870 2913 0.319900 CAGACCTCTTCCCACACGTG 60.320 60.000 15.48 15.48 0.00 4.49
2873 2919 0.610687 CTCCAGACCTCTTCCCACAC 59.389 60.000 0.00 0.00 0.00 3.82
2877 2923 0.041982 ACTCCTCCAGACCTCTTCCC 59.958 60.000 0.00 0.00 0.00 3.97
2890 2936 6.476243 TTTGCTTGAATAACGTAACTCCTC 57.524 37.500 0.00 0.00 0.00 3.71
2900 2946 9.846248 AAGAGTGATATGTTTTGCTTGAATAAC 57.154 29.630 0.00 0.00 0.00 1.89
2904 2950 7.939782 TCAAAGAGTGATATGTTTTGCTTGAA 58.060 30.769 0.00 0.00 0.00 2.69
2908 2954 5.474532 TGCTCAAAGAGTGATATGTTTTGCT 59.525 36.000 0.00 0.00 35.07 3.91
2909 2955 5.702865 TGCTCAAAGAGTGATATGTTTTGC 58.297 37.500 0.00 0.00 35.07 3.68
2911 2957 9.453572 TTCTATGCTCAAAGAGTGATATGTTTT 57.546 29.630 0.00 0.00 35.07 2.43
2914 2960 7.070447 TCCTTCTATGCTCAAAGAGTGATATGT 59.930 37.037 0.00 0.00 35.07 2.29
2917 2963 7.423844 TTCCTTCTATGCTCAAAGAGTGATA 57.576 36.000 0.00 0.00 35.07 2.15
2918 2964 5.946942 TCCTTCTATGCTCAAAGAGTGAT 57.053 39.130 0.00 0.00 35.07 3.06
2919 2965 5.745312 TTCCTTCTATGCTCAAAGAGTGA 57.255 39.130 0.00 0.00 34.17 3.41
2920 2966 6.183360 CCATTTCCTTCTATGCTCAAAGAGTG 60.183 42.308 0.00 0.00 31.39 3.51
2921 2967 5.884792 CCATTTCCTTCTATGCTCAAAGAGT 59.115 40.000 0.00 0.00 31.39 3.24
2924 2970 5.649395 TCACCATTTCCTTCTATGCTCAAAG 59.351 40.000 0.00 0.00 0.00 2.77
2942 2988 7.191593 TCATCTAAGCTATGCATATCACCAT 57.808 36.000 6.92 0.00 0.00 3.55
2945 2991 7.412346 CCGTTTCATCTAAGCTATGCATATCAC 60.412 40.741 6.92 0.17 0.00 3.06
2948 2994 6.467677 ACCGTTTCATCTAAGCTATGCATAT 58.532 36.000 6.92 0.00 0.00 1.78
2950 2996 4.708177 ACCGTTTCATCTAAGCTATGCAT 58.292 39.130 3.79 3.79 0.00 3.96
2959 3005 5.461032 AATGCCAAAACCGTTTCATCTAA 57.539 34.783 0.00 0.00 0.00 2.10
3005 3052 5.047660 GGTGGGCAATTTTTGATACACAGTA 60.048 40.000 0.00 0.00 34.19 2.74
3006 3053 4.262420 GGTGGGCAATTTTTGATACACAGT 60.262 41.667 0.00 0.00 34.19 3.55
3007 3054 4.021192 AGGTGGGCAATTTTTGATACACAG 60.021 41.667 0.00 0.00 34.19 3.66
3011 3058 4.381932 CCAGAGGTGGGCAATTTTTGATAC 60.382 45.833 0.00 0.00 40.67 2.24
3015 3062 2.460757 CCAGAGGTGGGCAATTTTTG 57.539 50.000 0.00 0.00 40.67 2.44
3039 3086 5.606348 TGGTTAGCATTTGAAGGTGTTTT 57.394 34.783 0.00 0.00 0.00 2.43
3061 3108 4.946160 TTATTTCCAGGGTCTCCAACAT 57.054 40.909 0.00 0.00 34.83 2.71
3062 3109 4.733077 TTTATTTCCAGGGTCTCCAACA 57.267 40.909 0.00 0.00 34.83 3.33
3067 3114 5.510430 AGAACCATTTATTTCCAGGGTCTC 58.490 41.667 0.00 0.00 42.55 3.36
3082 3129 6.183360 GGCAGGAATAAATTGCTAGAACCATT 60.183 38.462 0.00 0.00 36.24 3.16
3090 3137 4.274950 GCTAACGGCAGGAATAAATTGCTA 59.725 41.667 0.00 0.00 36.24 3.49
3107 3154 2.479837 TGGTGTCACTTCTTGCTAACG 58.520 47.619 2.35 0.00 0.00 3.18
3146 3196 6.279513 TGCACCTCCATAATTTTAAACTGG 57.720 37.500 0.00 0.00 0.00 4.00
3154 3204 7.330262 CCACTAAAATTGCACCTCCATAATTT 58.670 34.615 0.00 0.00 35.05 1.82
3155 3205 6.127083 CCCACTAAAATTGCACCTCCATAATT 60.127 38.462 0.00 0.00 0.00 1.40
3156 3206 5.363580 CCCACTAAAATTGCACCTCCATAAT 59.636 40.000 0.00 0.00 0.00 1.28
3157 3207 4.709397 CCCACTAAAATTGCACCTCCATAA 59.291 41.667 0.00 0.00 0.00 1.90
3160 3210 2.109128 TCCCACTAAAATTGCACCTCCA 59.891 45.455 0.00 0.00 0.00 3.86
3168 3218 5.534654 TGTCACTTCCTTCCCACTAAAATTG 59.465 40.000 0.00 0.00 0.00 2.32
3169 3219 5.701224 TGTCACTTCCTTCCCACTAAAATT 58.299 37.500 0.00 0.00 0.00 1.82
3170 3220 5.319043 TGTCACTTCCTTCCCACTAAAAT 57.681 39.130 0.00 0.00 0.00 1.82
3172 3222 4.651778 CATGTCACTTCCTTCCCACTAAA 58.348 43.478 0.00 0.00 0.00 1.85
3173 3223 3.559171 GCATGTCACTTCCTTCCCACTAA 60.559 47.826 0.00 0.00 0.00 2.24
3177 3227 0.038166 GGCATGTCACTTCCTTCCCA 59.962 55.000 0.00 0.00 0.00 4.37
3187 3240 3.131933 AGATGAGTGAGTAGGCATGTCAC 59.868 47.826 0.00 2.45 40.82 3.67
3193 3246 1.289231 AGGGAGATGAGTGAGTAGGCA 59.711 52.381 0.00 0.00 0.00 4.75
3195 3248 3.221771 CTCAGGGAGATGAGTGAGTAGG 58.778 54.545 0.00 0.00 41.52 3.18
3201 3254 1.779221 AGAGCTCAGGGAGATGAGTG 58.221 55.000 17.77 0.00 46.93 3.51
3221 3274 4.415179 TCACTTCCCCATATATTCAAGCCA 59.585 41.667 0.00 0.00 0.00 4.75
3222 3275 4.985538 TCACTTCCCCATATATTCAAGCC 58.014 43.478 0.00 0.00 0.00 4.35
3228 3282 9.170890 TGTTATCTTCTCACTTCCCCATATATT 57.829 33.333 0.00 0.00 0.00 1.28
3229 3283 8.598041 GTGTTATCTTCTCACTTCCCCATATAT 58.402 37.037 0.00 0.00 0.00 0.86
3235 3289 3.522553 CGTGTTATCTTCTCACTTCCCC 58.477 50.000 0.00 0.00 0.00 4.81
3236 3290 3.056035 ACCGTGTTATCTTCTCACTTCCC 60.056 47.826 0.00 0.00 0.00 3.97
3240 3294 4.866508 TCAACCGTGTTATCTTCTCACT 57.133 40.909 0.00 0.00 0.00 3.41
3255 3309 2.398554 CGGCCTCCACATTCAACCG 61.399 63.158 0.00 0.00 0.00 4.44
3261 3315 1.153086 GATGCTCGGCCTCCACATT 60.153 57.895 0.00 0.00 0.00 2.71
3262 3316 1.913951 TTGATGCTCGGCCTCCACAT 61.914 55.000 0.00 0.00 0.00 3.21
3263 3317 2.592032 TTGATGCTCGGCCTCCACA 61.592 57.895 0.00 0.00 0.00 4.17
3273 3327 1.268999 TGTTGCCGTTTGTTGATGCTC 60.269 47.619 0.00 0.00 0.00 4.26
3278 3338 0.317436 GCGATGTTGCCGTTTGTTGA 60.317 50.000 0.00 0.00 0.00 3.18
3297 3357 3.181499 GCTGAAGAAGATGGCAGTGAATG 60.181 47.826 0.00 0.00 0.00 2.67
3298 3358 3.015327 GCTGAAGAAGATGGCAGTGAAT 58.985 45.455 0.00 0.00 0.00 2.57
3299 3359 2.039480 AGCTGAAGAAGATGGCAGTGAA 59.961 45.455 0.00 0.00 0.00 3.18
3300 3360 1.627329 AGCTGAAGAAGATGGCAGTGA 59.373 47.619 0.00 0.00 0.00 3.41
3301 3361 1.738350 CAGCTGAAGAAGATGGCAGTG 59.262 52.381 8.42 0.00 38.71 3.66
3302 3362 1.949547 GCAGCTGAAGAAGATGGCAGT 60.950 52.381 20.43 0.00 42.82 4.40
3303 3363 0.733729 GCAGCTGAAGAAGATGGCAG 59.266 55.000 20.43 0.00 42.82 4.85
3304 3364 0.327259 AGCAGCTGAAGAAGATGGCA 59.673 50.000 20.43 0.00 42.82 4.92
3305 3365 2.322355 TAGCAGCTGAAGAAGATGGC 57.678 50.000 20.43 0.00 42.82 4.40
3306 3366 4.449131 TCAATAGCAGCTGAAGAAGATGG 58.551 43.478 20.43 0.00 42.82 3.51
3307 3367 6.621316 ATTCAATAGCAGCTGAAGAAGATG 57.379 37.500 20.43 6.42 45.49 2.90
3308 3368 6.459848 GCAATTCAATAGCAGCTGAAGAAGAT 60.460 38.462 20.43 0.00 35.14 2.40
3309 3369 5.163683 GCAATTCAATAGCAGCTGAAGAAGA 60.164 40.000 20.43 6.19 35.14 2.87
3310 3370 5.035443 GCAATTCAATAGCAGCTGAAGAAG 58.965 41.667 20.43 3.58 35.14 2.85
3311 3371 4.460034 TGCAATTCAATAGCAGCTGAAGAA 59.540 37.500 20.43 12.87 35.14 2.52
3312 3372 4.011698 TGCAATTCAATAGCAGCTGAAGA 58.988 39.130 20.43 3.84 35.14 2.87
3313 3373 4.365899 TGCAATTCAATAGCAGCTGAAG 57.634 40.909 20.43 1.20 35.14 3.02
3324 3384 5.202765 TCCATGTGTATCCTGCAATTCAAT 58.797 37.500 0.00 0.00 0.00 2.57
3327 3387 4.398988 TGTTCCATGTGTATCCTGCAATTC 59.601 41.667 0.00 0.00 0.00 2.17
3336 3396 4.445453 TGCTCATCTGTTCCATGTGTATC 58.555 43.478 0.00 0.00 0.00 2.24
3338 3398 3.979101 TGCTCATCTGTTCCATGTGTA 57.021 42.857 0.00 0.00 0.00 2.90
3339 3399 2.816087 GTTGCTCATCTGTTCCATGTGT 59.184 45.455 0.00 0.00 0.00 3.72
3340 3400 3.079578 AGTTGCTCATCTGTTCCATGTG 58.920 45.455 0.00 0.00 0.00 3.21
3341 3401 3.430042 AGTTGCTCATCTGTTCCATGT 57.570 42.857 0.00 0.00 0.00 3.21
3342 3402 4.763073 TCTAGTTGCTCATCTGTTCCATG 58.237 43.478 0.00 0.00 0.00 3.66
3343 3403 5.426689 TTCTAGTTGCTCATCTGTTCCAT 57.573 39.130 0.00 0.00 0.00 3.41
3344 3404 4.890158 TTCTAGTTGCTCATCTGTTCCA 57.110 40.909 0.00 0.00 0.00 3.53
3345 3405 5.482908 TCTTTCTAGTTGCTCATCTGTTCC 58.517 41.667 0.00 0.00 0.00 3.62
3346 3406 6.090628 CACTCTTTCTAGTTGCTCATCTGTTC 59.909 42.308 0.00 0.00 0.00 3.18
3347 3407 5.931146 CACTCTTTCTAGTTGCTCATCTGTT 59.069 40.000 0.00 0.00 0.00 3.16
3348 3408 5.477510 CACTCTTTCTAGTTGCTCATCTGT 58.522 41.667 0.00 0.00 0.00 3.41
3354 3420 2.999355 CCTGCACTCTTTCTAGTTGCTC 59.001 50.000 0.00 0.00 34.55 4.26
3356 3422 2.999355 CTCCTGCACTCTTTCTAGTTGC 59.001 50.000 0.00 0.00 34.25 4.17
3361 3427 1.902508 CCACCTCCTGCACTCTTTCTA 59.097 52.381 0.00 0.00 0.00 2.10
3367 3433 1.194781 TTCCTCCACCTCCTGCACTC 61.195 60.000 0.00 0.00 0.00 3.51
3370 3436 0.906756 CTCTTCCTCCACCTCCTGCA 60.907 60.000 0.00 0.00 0.00 4.41
3380 3446 1.967779 GATGCTACTCCCTCTTCCTCC 59.032 57.143 0.00 0.00 0.00 4.30
3382 3448 2.856760 TGATGCTACTCCCTCTTCCT 57.143 50.000 0.00 0.00 0.00 3.36
3383 3449 4.835615 TCTAATGATGCTACTCCCTCTTCC 59.164 45.833 0.00 0.00 0.00 3.46
3385 3451 4.837860 CCTCTAATGATGCTACTCCCTCTT 59.162 45.833 0.00 0.00 0.00 2.85
3386 3452 4.107149 TCCTCTAATGATGCTACTCCCTCT 59.893 45.833 0.00 0.00 0.00 3.69
3388 3454 4.415596 CTCCTCTAATGATGCTACTCCCT 58.584 47.826 0.00 0.00 0.00 4.20
3391 3457 5.069781 ACAACCTCCTCTAATGATGCTACTC 59.930 44.000 0.00 0.00 0.00 2.59
3394 3460 5.189736 ACAACAACCTCCTCTAATGATGCTA 59.810 40.000 0.00 0.00 0.00 3.49
3396 3462 4.265073 ACAACAACCTCCTCTAATGATGC 58.735 43.478 0.00 0.00 0.00 3.91
3397 3463 6.878317 TCTACAACAACCTCCTCTAATGATG 58.122 40.000 0.00 0.00 0.00 3.07
3399 3465 6.269077 TGTTCTACAACAACCTCCTCTAATGA 59.731 38.462 0.00 0.00 39.69 2.57
3400 3466 6.464222 TGTTCTACAACAACCTCCTCTAATG 58.536 40.000 0.00 0.00 39.69 1.90
3402 3468 6.325545 TCTTGTTCTACAACAACCTCCTCTAA 59.674 38.462 0.00 0.00 45.73 2.10
3403 3469 5.836898 TCTTGTTCTACAACAACCTCCTCTA 59.163 40.000 0.00 0.00 45.73 2.43
3407 3473 5.365619 TCTTCTTGTTCTACAACAACCTCC 58.634 41.667 0.00 0.00 45.73 4.30
3410 3476 6.509677 CGTCTTCTTCTTGTTCTACAACAACC 60.510 42.308 0.00 0.00 45.73 3.77
3413 3479 5.898174 TCGTCTTCTTCTTGTTCTACAACA 58.102 37.500 0.00 0.00 40.97 3.33
3415 3481 6.745116 TCATCGTCTTCTTCTTGTTCTACAA 58.255 36.000 0.00 0.00 36.54 2.41
3416 3482 6.327279 TCATCGTCTTCTTCTTGTTCTACA 57.673 37.500 0.00 0.00 0.00 2.74
3417 3483 6.254589 CCATCATCGTCTTCTTCTTGTTCTAC 59.745 42.308 0.00 0.00 0.00 2.59
3418 3484 6.333416 CCATCATCGTCTTCTTCTTGTTCTA 58.667 40.000 0.00 0.00 0.00 2.10
3419 3485 5.174395 CCATCATCGTCTTCTTCTTGTTCT 58.826 41.667 0.00 0.00 0.00 3.01
3420 3486 4.331168 CCCATCATCGTCTTCTTCTTGTTC 59.669 45.833 0.00 0.00 0.00 3.18
3421 3487 4.256920 CCCATCATCGTCTTCTTCTTGTT 58.743 43.478 0.00 0.00 0.00 2.83
3422 3488 3.866651 CCCATCATCGTCTTCTTCTTGT 58.133 45.455 0.00 0.00 0.00 3.16
3423 3489 2.611292 GCCCATCATCGTCTTCTTCTTG 59.389 50.000 0.00 0.00 0.00 3.02
3434 3500 2.203167 AGCAGCAGCCCATCATCG 60.203 61.111 0.00 0.00 43.56 3.84
3437 3503 1.690283 TAGGAGCAGCAGCCCATCA 60.690 57.895 10.41 0.00 43.56 3.07
3453 3519 2.210711 GGGAGAGATGGGCCGGTAG 61.211 68.421 1.90 0.00 0.00 3.18
3459 3525 2.841988 AGAGCGGGAGAGATGGGC 60.842 66.667 0.00 0.00 0.00 5.36
3471 3537 1.066908 GATCAACTCCCTGAGAGAGCG 59.933 57.143 0.00 0.00 46.50 5.03
3472 3538 2.387757 AGATCAACTCCCTGAGAGAGC 58.612 52.381 0.00 0.00 46.50 4.09
3477 3543 3.370315 CCCTTCAAGATCAACTCCCTGAG 60.370 52.174 0.00 0.00 35.52 3.35
3480 3546 1.283321 GCCCTTCAAGATCAACTCCCT 59.717 52.381 0.00 0.00 0.00 4.20
3481 3547 1.283321 AGCCCTTCAAGATCAACTCCC 59.717 52.381 0.00 0.00 0.00 4.30
3490 3556 0.891373 CTCTCGACAGCCCTTCAAGA 59.109 55.000 0.00 0.00 0.00 3.02
3491 3557 0.739112 GCTCTCGACAGCCCTTCAAG 60.739 60.000 0.51 0.00 32.76 3.02
3492 3558 1.188219 AGCTCTCGACAGCCCTTCAA 61.188 55.000 9.23 0.00 40.65 2.69
3494 3560 0.818296 TAAGCTCTCGACAGCCCTTC 59.182 55.000 9.23 0.00 40.65 3.46
3497 3563 1.410882 AGAATAAGCTCTCGACAGCCC 59.589 52.381 9.23 0.00 40.65 5.19
3498 3564 2.468831 CAGAATAAGCTCTCGACAGCC 58.531 52.381 9.23 0.00 40.65 4.85
3499 3565 2.468831 CCAGAATAAGCTCTCGACAGC 58.531 52.381 4.28 4.28 39.99 4.40
3500 3566 2.100584 AGCCAGAATAAGCTCTCGACAG 59.899 50.000 0.00 0.00 32.71 3.51
3509 3575 1.755179 TCTTGGCAGCCAGAATAAGC 58.245 50.000 15.50 0.00 33.81 3.09
3513 3579 0.112995 TGGTTCTTGGCAGCCAGAAT 59.887 50.000 21.92 0.00 33.81 2.40
3515 3581 1.228245 GTGGTTCTTGGCAGCCAGA 60.228 57.895 15.50 11.64 33.81 3.86
3519 3585 1.301716 TCTCGTGGTTCTTGGCAGC 60.302 57.895 0.00 0.00 0.00 5.25
3525 3591 1.705873 ACTCCTGTCTCGTGGTTCTT 58.294 50.000 0.00 0.00 0.00 2.52
3526 3592 2.438411 CTACTCCTGTCTCGTGGTTCT 58.562 52.381 0.00 0.00 0.00 3.01
3527 3593 1.473278 CCTACTCCTGTCTCGTGGTTC 59.527 57.143 0.00 0.00 0.00 3.62
3530 3596 1.384525 CTCCTACTCCTGTCTCGTGG 58.615 60.000 0.00 0.00 0.00 4.94
3531 3597 1.340211 ACCTCCTACTCCTGTCTCGTG 60.340 57.143 0.00 0.00 0.00 4.35
3532 3598 0.993470 ACCTCCTACTCCTGTCTCGT 59.007 55.000 0.00 0.00 0.00 4.18
3533 3599 1.210967 AGACCTCCTACTCCTGTCTCG 59.789 57.143 0.00 0.00 30.81 4.04
3534 3600 2.650322 CAGACCTCCTACTCCTGTCTC 58.350 57.143 0.00 0.00 34.21 3.36
3535 3601 1.341581 GCAGACCTCCTACTCCTGTCT 60.342 57.143 0.00 0.00 36.77 3.41
3536 3602 1.107945 GCAGACCTCCTACTCCTGTC 58.892 60.000 0.00 0.00 0.00 3.51
3537 3603 0.409876 TGCAGACCTCCTACTCCTGT 59.590 55.000 0.00 0.00 0.00 4.00
3538 3604 1.480137 CTTGCAGACCTCCTACTCCTG 59.520 57.143 0.00 0.00 0.00 3.86
3539 3605 1.859302 CTTGCAGACCTCCTACTCCT 58.141 55.000 0.00 0.00 0.00 3.69
3544 3613 0.543277 CATGGCTTGCAGACCTCCTA 59.457 55.000 8.39 0.00 0.00 2.94
3558 3627 0.322816 TTCTTGAGGGAGTGCATGGC 60.323 55.000 0.00 0.00 0.00 4.40
3592 3661 1.179174 GGACAGGAACTTGGGGCAAC 61.179 60.000 0.00 0.00 34.60 4.17
3595 3664 2.198304 ATCGGACAGGAACTTGGGGC 62.198 60.000 0.00 0.00 34.60 5.80
3597 3666 0.905357 AGATCGGACAGGAACTTGGG 59.095 55.000 0.00 0.00 34.60 4.12
3598 3667 1.827969 AGAGATCGGACAGGAACTTGG 59.172 52.381 0.00 0.00 34.60 3.61
3599 3668 2.757868 AGAGAGATCGGACAGGAACTTG 59.242 50.000 0.00 0.00 34.60 3.16
3600 3669 3.094484 AGAGAGATCGGACAGGAACTT 57.906 47.619 0.00 0.00 34.60 2.66
3601 3670 2.818751 AGAGAGATCGGACAGGAACT 57.181 50.000 0.00 0.00 43.88 3.01
3602 3671 2.100087 GGAAGAGAGATCGGACAGGAAC 59.900 54.545 0.00 0.00 0.00 3.62
3603 3672 2.024846 AGGAAGAGAGATCGGACAGGAA 60.025 50.000 0.00 0.00 0.00 3.36
3604 3673 1.566703 AGGAAGAGAGATCGGACAGGA 59.433 52.381 0.00 0.00 0.00 3.86
3605 3674 1.680735 CAGGAAGAGAGATCGGACAGG 59.319 57.143 0.00 0.00 0.00 4.00
3606 3675 2.374184 ACAGGAAGAGAGATCGGACAG 58.626 52.381 0.00 0.00 0.00 3.51
3607 3676 2.493675 CAACAGGAAGAGAGATCGGACA 59.506 50.000 0.00 0.00 0.00 4.02
3608 3677 2.737039 GCAACAGGAAGAGAGATCGGAC 60.737 54.545 0.00 0.00 0.00 4.79
3609 3678 1.478510 GCAACAGGAAGAGAGATCGGA 59.521 52.381 0.00 0.00 0.00 4.55
3610 3679 1.472376 GGCAACAGGAAGAGAGATCGG 60.472 57.143 0.00 0.00 0.00 4.18
3611 3680 1.472376 GGGCAACAGGAAGAGAGATCG 60.472 57.143 0.00 0.00 39.74 3.69
3638 3715 3.011517 AGGCGTTGCAGGGAGGAT 61.012 61.111 0.00 0.00 0.00 3.24
3657 3734 5.252863 TGTTTCCCATAGGATCTTCAAGGAA 59.747 40.000 0.00 0.00 43.54 3.36
3664 3741 4.478317 TGTCCATGTTTCCCATAGGATCTT 59.522 41.667 0.00 0.00 43.54 2.40
3667 3744 3.433598 CGTGTCCATGTTTCCCATAGGAT 60.434 47.826 0.00 0.00 43.54 3.24
3670 3747 1.670811 GCGTGTCCATGTTTCCCATAG 59.329 52.381 0.00 0.00 30.71 2.23
3676 3753 1.128692 GCACTAGCGTGTCCATGTTTC 59.871 52.381 0.00 0.00 43.16 2.78
3677 3754 1.156736 GCACTAGCGTGTCCATGTTT 58.843 50.000 0.00 0.00 43.16 2.83
3678 3755 2.840974 GCACTAGCGTGTCCATGTT 58.159 52.632 0.00 0.00 43.16 2.71
3679 3756 4.598257 GCACTAGCGTGTCCATGT 57.402 55.556 0.00 0.00 43.16 3.21
3686 3763 0.448197 TCGAGAGAAGCACTAGCGTG 59.552 55.000 0.00 0.00 40.18 5.34
3698 3775 1.027255 CAGAGGCGAGGTTCGAGAGA 61.027 60.000 2.20 0.00 43.74 3.10
3711 3788 2.197577 GCATAAGTTCTCGACAGAGGC 58.802 52.381 0.00 0.00 44.47 4.70
3717 3794 8.788813 CAAACAATTAATGCATAAGTTCTCGAC 58.211 33.333 0.00 0.00 0.00 4.20
3725 3802 6.757947 CCTCACCCAAACAATTAATGCATAAG 59.242 38.462 0.00 0.00 0.00 1.73
3729 3806 4.155709 TCCTCACCCAAACAATTAATGCA 58.844 39.130 0.00 0.00 0.00 3.96
3735 3812 7.235399 ACATCTTAAATCCTCACCCAAACAATT 59.765 33.333 0.00 0.00 0.00 2.32
3736 3813 6.725834 ACATCTTAAATCCTCACCCAAACAAT 59.274 34.615 0.00 0.00 0.00 2.71
3737 3814 6.015519 CACATCTTAAATCCTCACCCAAACAA 60.016 38.462 0.00 0.00 0.00 2.83
3746 3826 3.117888 GGCCCTCACATCTTAAATCCTCA 60.118 47.826 0.00 0.00 0.00 3.86
3761 3841 0.322816 GAAGATGCAACAGGCCCTCA 60.323 55.000 0.00 0.00 43.89 3.86
3779 3859 0.835971 TGAGCTGGCCCTGTGTAAGA 60.836 55.000 0.00 0.00 0.00 2.10
3869 3970 1.181098 TTGGGAAAGGAAGCAGCTGC 61.181 55.000 31.53 31.53 42.49 5.25
3872 3973 1.688735 AGTTTTGGGAAAGGAAGCAGC 59.311 47.619 0.00 0.00 0.00 5.25
3873 3974 2.546584 GCAGTTTTGGGAAAGGAAGCAG 60.547 50.000 0.00 0.00 0.00 4.24
3874 3975 1.412343 GCAGTTTTGGGAAAGGAAGCA 59.588 47.619 0.00 0.00 0.00 3.91
3877 3978 2.038659 CCTGCAGTTTTGGGAAAGGAA 58.961 47.619 13.81 0.00 0.00 3.36
3878 3979 1.216678 TCCTGCAGTTTTGGGAAAGGA 59.783 47.619 13.81 0.00 0.00 3.36
3879 3980 1.703411 TCCTGCAGTTTTGGGAAAGG 58.297 50.000 13.81 0.00 0.00 3.11
3883 3984 1.813862 CGAGTTCCTGCAGTTTTGGGA 60.814 52.381 13.81 0.00 0.00 4.37
3885 3986 1.532868 CTCGAGTTCCTGCAGTTTTGG 59.467 52.381 13.81 0.00 0.00 3.28
3887 3988 2.484889 GTCTCGAGTTCCTGCAGTTTT 58.515 47.619 13.81 0.00 0.00 2.43
3914 4015 1.258445 CGGTAAGGACTCCTGCCACT 61.258 60.000 15.55 0.00 32.13 4.00
3915 4016 1.218316 CGGTAAGGACTCCTGCCAC 59.782 63.158 15.55 7.61 32.13 5.01
3917 4018 2.187163 GCGGTAAGGACTCCTGCC 59.813 66.667 0.00 3.75 32.13 4.85
3981 4082 3.065371 CACTCCACCTCTTTGTTGTGTTC 59.935 47.826 0.00 0.00 0.00 3.18
3983 4084 2.643551 CACTCCACCTCTTTGTTGTGT 58.356 47.619 0.00 0.00 0.00 3.72
3984 4085 1.334869 GCACTCCACCTCTTTGTTGTG 59.665 52.381 0.00 0.00 0.00 3.33
4002 4103 0.473755 TCTTGCTCCTTGGTGAAGCA 59.526 50.000 0.00 0.00 0.00 3.91
4009 4110 1.077858 GCCTCCTCTTGCTCCTTGG 60.078 63.158 0.00 0.00 0.00 3.61
4028 4129 1.275421 GGGACCTGAGGAGGGAAAGG 61.275 65.000 4.99 0.00 44.84 3.11
4064 4165 0.674895 GCAGCTTAGGACACCACTGG 60.675 60.000 0.00 0.00 0.00 4.00
4065 4166 1.016130 CGCAGCTTAGGACACCACTG 61.016 60.000 0.00 0.00 0.00 3.66
4066 4167 1.293498 CGCAGCTTAGGACACCACT 59.707 57.895 0.00 0.00 0.00 4.00
4126 4233 5.455899 GCTCCAGGTCTCCAGATCAATAATT 60.456 44.000 0.00 0.00 0.00 1.40
4131 4238 1.198713 GCTCCAGGTCTCCAGATCAA 58.801 55.000 0.00 0.00 0.00 2.57
4140 4247 0.980231 GACAGGATGGCTCCAGGTCT 60.980 60.000 14.52 0.00 44.72 3.85
4142 4249 3.732938 GACAGGATGGCTCCAGGT 58.267 61.111 5.90 3.75 44.72 4.00
4156 4263 2.256391 CCATTCTTTGGCAGCGACA 58.744 52.632 0.00 0.00 39.09 4.35
4181 4288 0.390340 CTAACTCTTGCAGCGAGCCA 60.390 55.000 13.22 3.16 44.83 4.75
4182 4289 0.390472 ACTAACTCTTGCAGCGAGCC 60.390 55.000 13.22 0.00 44.83 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.