Multiple sequence alignment - TraesCS1B01G467500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G467500 chr1B 100.000 2297 0 0 1 2297 677275005 677272709 0.000000e+00 4242.0
1 TraesCS1B01G467500 chr1B 97.516 161 4 0 605 765 120624226 120624066 2.250000e-70 276.0
2 TraesCS1B01G467500 chr1B 95.050 101 3 2 2161 2259 674916811 674916911 8.500000e-35 158.0
3 TraesCS1B01G467500 chr1B 94.828 58 3 0 2206 2263 96515896 96515953 8.740000e-15 91.6
4 TraesCS1B01G467500 chr1B 94.915 59 2 1 2148 2205 400753365 400753423 8.740000e-15 91.6
5 TraesCS1B01G467500 chr1D 92.231 605 42 4 1 605 486303219 486302620 0.000000e+00 852.0
6 TraesCS1B01G467500 chr1D 88.865 467 24 7 765 1203 486302628 486302162 1.200000e-152 549.0
7 TraesCS1B01G467500 chr1D 88.519 270 25 3 978 1245 486251706 486251441 2.850000e-84 322.0
8 TraesCS1B01G467500 chr1D 80.226 354 49 12 1421 1760 486300061 486299715 1.760000e-61 246.0
9 TraesCS1B01G467500 chr1D 74.464 513 75 36 1254 1728 486251401 486250907 1.090000e-38 171.0
10 TraesCS1B01G467500 chr1D 85.075 134 13 6 1255 1386 486300288 486300160 1.850000e-26 130.0
11 TraesCS1B01G467500 chr1D 92.941 85 3 1 1856 1940 486299582 486299501 1.110000e-23 121.0
12 TraesCS1B01G467500 chr1D 93.548 62 2 1 2154 2213 441002329 441002268 8.740000e-15 91.6
13 TraesCS1B01G467500 chr2B 89.634 164 14 2 605 766 785535525 785535363 2.990000e-49 206.0
14 TraesCS1B01G467500 chr2B 88.889 162 14 3 605 764 397938601 397938760 1.800000e-46 196.0
15 TraesCS1B01G467500 chr2B 86.857 175 18 4 598 769 296085567 296085739 8.380000e-45 191.0
16 TraesCS1B01G467500 chr2B 93.443 61 4 0 2206 2266 33575127 33575187 8.740000e-15 91.6
17 TraesCS1B01G467500 chr7D 89.024 164 15 3 603 764 600764279 600764441 1.390000e-47 200.0
18 TraesCS1B01G467500 chr5A 89.024 164 15 2 604 765 648865125 648864963 1.390000e-47 200.0
19 TraesCS1B01G467500 chr1A 83.408 223 29 5 1543 1760 583949868 583949649 1.390000e-47 200.0
20 TraesCS1B01G467500 chr1A 96.471 85 3 0 1856 1940 583949516 583949432 8.560000e-30 141.0
21 TraesCS1B01G467500 chr2D 88.957 163 15 3 604 764 391461636 391461475 5.010000e-47 198.0
22 TraesCS1B01G467500 chr2D 91.262 103 4 2 2159 2261 189527974 189528071 3.980000e-28 135.0
23 TraesCS1B01G467500 chr2D 93.548 62 2 1 2154 2213 338668358 338668419 8.740000e-15 91.6
24 TraesCS1B01G467500 chr2A 89.024 164 13 4 605 765 125203047 125203208 5.010000e-47 198.0
25 TraesCS1B01G467500 chr2A 96.429 56 2 0 2206 2261 181631344 181631399 2.430000e-15 93.5
26 TraesCS1B01G467500 chr4A 88.889 162 15 2 605 764 633075332 633075492 1.800000e-46 196.0
27 TraesCS1B01G467500 chrUn 89.815 108 9 1 2154 2259 128516335 128516228 1.110000e-28 137.0
28 TraesCS1B01G467500 chrUn 98.148 54 1 0 2154 2207 99524386 99524333 6.760000e-16 95.3
29 TraesCS1B01G467500 chr3D 87.273 110 11 2 2154 2260 429788544 429788435 3.100000e-24 122.0
30 TraesCS1B01G467500 chr3D 82.692 104 18 0 1021 1124 45954833 45954730 2.430000e-15 93.5
31 TraesCS1B01G467500 chr4D 98.148 54 1 0 2154 2207 407364185 407364132 6.760000e-16 95.3
32 TraesCS1B01G467500 chr6A 96.429 56 2 0 2206 2261 594435583 594435528 2.430000e-15 93.5
33 TraesCS1B01G467500 chr6A 77.193 171 26 10 998 1166 524304840 524304999 1.130000e-13 87.9
34 TraesCS1B01G467500 chr3B 96.429 56 2 0 2206 2261 157251708 157251653 2.430000e-15 93.5
35 TraesCS1B01G467500 chr6D 77.515 169 25 10 1000 1166 382345370 382345527 3.140000e-14 89.8
36 TraesCS1B01G467500 chr6B 76.923 169 26 10 1000 1166 571729840 571729997 1.460000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G467500 chr1B 677272709 677275005 2296 True 4242.0 4242 100.0000 1 2297 1 chr1B.!!$R2 2296
1 TraesCS1B01G467500 chr1D 486299501 486303219 3718 True 379.6 852 87.8676 1 1940 5 chr1D.!!$R3 1939
2 TraesCS1B01G467500 chr1D 486250907 486251706 799 True 246.5 322 81.4915 978 1728 2 chr1D.!!$R2 750

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
767 768 0.18135 CCAGTTGACATCCCTAGCCC 59.819 60.0 0.0 0.0 0.0 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1795 3765 0.035881 TTCAGAAGCTCACCCTGCTG 59.964 55.0 0.0 0.0 41.03 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.668628 CGGCCATTACAAAAGTGGTGC 60.669 52.381 2.24 0.00 35.44 5.01
105 106 0.672889 TTTCAATGCAAGCGCCAGAA 59.327 45.000 2.29 0.00 37.32 3.02
125 126 2.356673 GGTTTCTCGGCCGTCGTT 60.357 61.111 27.15 0.00 40.32 3.85
138 139 2.073816 CCGTCGTTCCTGTTTAATGCT 58.926 47.619 0.00 0.00 0.00 3.79
141 142 1.810151 TCGTTCCTGTTTAATGCTGGC 59.190 47.619 0.00 0.00 0.00 4.85
175 176 1.595993 GCAGCCACGGTAGAGAGTCA 61.596 60.000 0.00 0.00 0.00 3.41
189 190 0.249073 GAGTCATCATGTCCCGTCCG 60.249 60.000 0.00 0.00 0.00 4.79
197 198 2.048503 GTCCCGTCCGGTCAAGTG 60.049 66.667 0.00 0.00 0.00 3.16
203 204 3.307906 TCCGGTCAAGTGTCCCCG 61.308 66.667 0.00 0.00 40.12 5.73
214 215 0.676782 GTGTCCCCGGGATTGAACAG 60.677 60.000 26.32 1.48 32.73 3.16
218 219 2.046314 CCGGGATTGAACAGGCGT 60.046 61.111 0.00 0.00 0.00 5.68
219 220 1.219664 CCGGGATTGAACAGGCGTA 59.780 57.895 0.00 0.00 0.00 4.42
231 232 1.380112 AGGCGTAGAGACCAGGACC 60.380 63.158 0.00 0.00 0.00 4.46
253 254 1.296056 ACCGGTTCAATTTCGGCTCG 61.296 55.000 0.00 0.00 46.87 5.03
261 262 1.068474 AATTTCGGCTCGAGTGAACG 58.932 50.000 15.13 13.51 37.14 3.95
269 270 2.127345 CGAGTGAACGTCGCGTCT 60.127 61.111 5.77 0.00 39.99 4.18
274 275 3.173240 GAACGTCGCGTCTGCTCC 61.173 66.667 5.77 0.00 39.99 4.70
275 276 3.612371 GAACGTCGCGTCTGCTCCT 62.612 63.158 5.77 0.00 39.99 3.69
325 326 1.815421 GTGCGTTCATGCGGGAGAT 60.815 57.895 0.00 0.00 37.81 2.75
354 355 0.407918 GGGGTTCTTTGGTGGGATCA 59.592 55.000 0.00 0.00 0.00 2.92
355 356 1.203125 GGGGTTCTTTGGTGGGATCAA 60.203 52.381 0.00 0.00 0.00 2.57
364 365 1.203376 TGGTGGGATCAAGGTGTAGGA 60.203 52.381 0.00 0.00 0.00 2.94
424 425 6.096705 TCCTCTAATTTACGTCCGGTTTATGA 59.903 38.462 0.00 0.00 0.00 2.15
489 490 3.093278 GCTTGAAGCATCCGGACG 58.907 61.111 13.09 0.00 41.89 4.79
513 514 2.584835 TGTCCTGATGTTTTGAGGGG 57.415 50.000 0.00 0.00 0.00 4.79
535 536 1.712081 CGTTGAAGATGCTCTGCCG 59.288 57.895 0.00 0.00 0.00 5.69
537 538 2.102438 TTGAAGATGCTCTGCCGCG 61.102 57.895 0.00 0.00 0.00 6.46
538 539 2.510238 GAAGATGCTCTGCCGCGT 60.510 61.111 4.92 0.00 0.00 6.01
539 540 2.806856 GAAGATGCTCTGCCGCGTG 61.807 63.158 4.92 0.00 0.00 5.34
540 541 3.596066 AAGATGCTCTGCCGCGTGT 62.596 57.895 4.92 0.00 0.00 4.49
601 602 1.283905 ACAAATTAACTAGCCGCCCCT 59.716 47.619 0.00 0.00 0.00 4.79
602 603 2.506644 ACAAATTAACTAGCCGCCCCTA 59.493 45.455 0.00 0.00 0.00 3.53
603 604 2.876550 CAAATTAACTAGCCGCCCCTAC 59.123 50.000 0.00 0.00 0.00 3.18
604 605 2.098618 ATTAACTAGCCGCCCCTACT 57.901 50.000 0.00 0.00 0.00 2.57
605 606 2.754012 TTAACTAGCCGCCCCTACTA 57.246 50.000 0.00 0.00 0.00 1.82
606 607 2.283145 TAACTAGCCGCCCCTACTAG 57.717 55.000 0.00 0.00 39.44 2.57
607 608 0.469518 AACTAGCCGCCCCTACTAGG 60.470 60.000 0.00 0.00 38.15 3.02
620 621 3.305720 CCTACTAGGGATGTAAGTGGCA 58.694 50.000 0.00 0.00 0.00 4.92
621 622 3.709653 CCTACTAGGGATGTAAGTGGCAA 59.290 47.826 0.00 0.00 0.00 4.52
622 623 4.163458 CCTACTAGGGATGTAAGTGGCAAA 59.837 45.833 0.00 0.00 0.00 3.68
623 624 4.862641 ACTAGGGATGTAAGTGGCAAAT 57.137 40.909 0.00 0.00 0.00 2.32
624 625 5.968676 ACTAGGGATGTAAGTGGCAAATA 57.031 39.130 0.00 0.00 0.00 1.40
625 626 6.321821 ACTAGGGATGTAAGTGGCAAATAA 57.678 37.500 0.00 0.00 0.00 1.40
626 627 6.727394 ACTAGGGATGTAAGTGGCAAATAAA 58.273 36.000 0.00 0.00 0.00 1.40
627 628 7.354312 ACTAGGGATGTAAGTGGCAAATAAAT 58.646 34.615 0.00 0.00 0.00 1.40
628 629 6.469782 AGGGATGTAAGTGGCAAATAAATG 57.530 37.500 0.00 0.00 0.00 2.32
629 630 5.363580 AGGGATGTAAGTGGCAAATAAATGG 59.636 40.000 0.00 0.00 0.00 3.16
630 631 5.049828 GGATGTAAGTGGCAAATAAATGGC 58.950 41.667 0.00 0.00 45.44 4.40
636 637 1.921243 GGCAAATAAATGGCGTCCAC 58.079 50.000 0.50 0.00 35.80 4.02
637 638 1.203523 GGCAAATAAATGGCGTCCACA 59.796 47.619 0.50 0.00 35.80 4.17
638 639 2.353208 GGCAAATAAATGGCGTCCACAA 60.353 45.455 0.50 0.00 35.80 3.33
639 640 2.923020 GCAAATAAATGGCGTCCACAAG 59.077 45.455 0.50 0.00 35.80 3.16
640 641 2.923020 CAAATAAATGGCGTCCACAAGC 59.077 45.455 0.50 0.00 35.80 4.01
646 647 3.284449 GCGTCCACAAGCCCGTTT 61.284 61.111 0.00 0.00 0.00 3.60
647 648 1.962306 GCGTCCACAAGCCCGTTTA 60.962 57.895 0.00 0.00 0.00 2.01
648 649 1.908066 GCGTCCACAAGCCCGTTTAG 61.908 60.000 0.00 0.00 0.00 1.85
649 650 0.601841 CGTCCACAAGCCCGTTTAGT 60.602 55.000 0.00 0.00 0.00 2.24
650 651 1.601166 GTCCACAAGCCCGTTTAGTT 58.399 50.000 0.00 0.00 0.00 2.24
651 652 2.769893 GTCCACAAGCCCGTTTAGTTA 58.230 47.619 0.00 0.00 0.00 2.24
652 653 2.740447 GTCCACAAGCCCGTTTAGTTAG 59.260 50.000 0.00 0.00 0.00 2.34
653 654 2.633967 TCCACAAGCCCGTTTAGTTAGA 59.366 45.455 0.00 0.00 0.00 2.10
654 655 3.262405 TCCACAAGCCCGTTTAGTTAGAT 59.738 43.478 0.00 0.00 0.00 1.98
655 656 4.007659 CCACAAGCCCGTTTAGTTAGATT 58.992 43.478 0.00 0.00 0.00 2.40
656 657 4.457949 CCACAAGCCCGTTTAGTTAGATTT 59.542 41.667 0.00 0.00 0.00 2.17
657 658 5.048294 CCACAAGCCCGTTTAGTTAGATTTT 60.048 40.000 0.00 0.00 0.00 1.82
658 659 6.443792 CACAAGCCCGTTTAGTTAGATTTTT 58.556 36.000 0.00 0.00 0.00 1.94
735 736 9.563748 TCCTATTATAAATGGACTTTAAACGGG 57.436 33.333 5.90 0.00 33.15 5.28
736 737 9.563748 CCTATTATAAATGGACTTTAAACGGGA 57.436 33.333 2.03 0.00 33.15 5.14
743 744 8.996024 AAATGGACTTTAAACGGGATTAAATG 57.004 30.769 4.30 2.95 35.02 2.32
744 745 6.518208 TGGACTTTAAACGGGATTAAATGG 57.482 37.500 4.30 0.00 35.02 3.16
745 746 5.419471 TGGACTTTAAACGGGATTAAATGGG 59.581 40.000 4.30 0.00 35.02 4.00
746 747 5.653330 GGACTTTAAACGGGATTAAATGGGA 59.347 40.000 4.30 0.00 35.02 4.37
747 748 6.322969 GGACTTTAAACGGGATTAAATGGGAT 59.677 38.462 4.30 0.00 35.02 3.85
748 749 7.342769 ACTTTAAACGGGATTAAATGGGATC 57.657 36.000 4.30 0.00 35.02 3.36
749 750 6.322969 ACTTTAAACGGGATTAAATGGGATCC 59.677 38.462 1.92 1.92 40.90 3.36
750 751 3.963476 AACGGGATTAAATGGGATCCA 57.037 42.857 15.23 0.00 42.94 3.41
751 752 3.508845 ACGGGATTAAATGGGATCCAG 57.491 47.619 15.23 3.31 42.94 3.86
752 753 2.783510 ACGGGATTAAATGGGATCCAGT 59.216 45.455 15.23 0.00 43.15 4.00
753 754 3.204382 ACGGGATTAAATGGGATCCAGTT 59.796 43.478 15.23 7.99 44.78 3.16
754 755 3.569701 CGGGATTAAATGGGATCCAGTTG 59.430 47.826 15.23 0.00 42.00 3.16
755 756 4.688597 CGGGATTAAATGGGATCCAGTTGA 60.689 45.833 15.23 2.91 42.00 3.18
756 757 4.584743 GGGATTAAATGGGATCCAGTTGAC 59.415 45.833 15.23 0.00 42.00 3.18
757 758 5.200483 GGATTAAATGGGATCCAGTTGACA 58.800 41.667 15.23 0.77 42.00 3.58
758 759 5.835280 GGATTAAATGGGATCCAGTTGACAT 59.165 40.000 15.23 3.47 42.00 3.06
759 760 6.015940 GGATTAAATGGGATCCAGTTGACATC 60.016 42.308 15.23 6.28 42.00 3.06
760 761 3.303351 AATGGGATCCAGTTGACATCC 57.697 47.619 15.23 0.00 36.75 3.51
764 765 3.760580 GGATCCAGTTGACATCCCTAG 57.239 52.381 6.95 0.00 31.31 3.02
765 766 2.224402 GGATCCAGTTGACATCCCTAGC 60.224 54.545 6.95 0.00 31.31 3.42
766 767 1.204146 TCCAGTTGACATCCCTAGCC 58.796 55.000 0.00 0.00 0.00 3.93
767 768 0.181350 CCAGTTGACATCCCTAGCCC 59.819 60.000 0.00 0.00 0.00 5.19
768 769 0.181350 CAGTTGACATCCCTAGCCCC 59.819 60.000 0.00 0.00 0.00 5.80
809 810 0.827089 TGCATGCCGGGAATAATGGG 60.827 55.000 16.68 0.00 0.00 4.00
860 861 6.293135 GCTAGCTACAAATACAATGCCTTCTC 60.293 42.308 7.70 0.00 0.00 2.87
867 868 2.797177 ACAATGCCTTCTCCTTCTCC 57.203 50.000 0.00 0.00 0.00 3.71
1101 1138 4.157958 CTGCTGAAGAAGGCGCGC 62.158 66.667 25.94 25.94 0.00 6.86
1128 1165 1.515088 CGTGCTCTGCGACGAAGAT 60.515 57.895 5.87 0.00 36.03 2.40
1130 1167 1.807165 TGCTCTGCGACGAAGATGC 60.807 57.895 5.87 12.38 0.00 3.91
1131 1168 1.807165 GCTCTGCGACGAAGATGCA 60.807 57.895 17.33 0.00 38.60 3.96
1167 1204 2.281484 TTCTCCAGCACCGGCAAC 60.281 61.111 0.00 0.00 44.61 4.17
1188 1225 2.815647 GCCGGTGACTACTGCAGC 60.816 66.667 15.27 0.00 31.55 5.25
1203 1240 1.296727 GCAGCCCGAATACAAGGTAC 58.703 55.000 0.00 0.00 0.00 3.34
1204 1241 1.567504 CAGCCCGAATACAAGGTACG 58.432 55.000 0.00 0.00 0.00 3.67
1205 1242 1.134907 CAGCCCGAATACAAGGTACGT 60.135 52.381 0.00 0.00 0.00 3.57
1206 1243 1.134907 AGCCCGAATACAAGGTACGTG 60.135 52.381 0.00 0.00 45.09 4.49
1229 1266 0.252284 AGGTTGATCTGTCCCGTCCT 60.252 55.000 0.00 0.00 0.00 3.85
1230 1267 0.108138 GGTTGATCTGTCCCGTCCTG 60.108 60.000 0.00 0.00 0.00 3.86
1237 1274 1.203087 TCTGTCCCGTCCTGTCCTTAA 60.203 52.381 0.00 0.00 0.00 1.85
1246 3074 2.754552 GTCCTGTCCTTAATGCATGCAA 59.245 45.455 26.68 6.15 0.00 4.08
1247 3075 3.018856 TCCTGTCCTTAATGCATGCAAG 58.981 45.455 26.68 17.52 0.00 4.01
1248 3076 3.018856 CCTGTCCTTAATGCATGCAAGA 58.981 45.455 26.68 12.90 0.00 3.02
1249 3077 3.066342 CCTGTCCTTAATGCATGCAAGAG 59.934 47.826 26.68 20.61 0.00 2.85
1359 3230 3.791586 GTCCCAGCTCCAGCCTCC 61.792 72.222 0.00 0.00 43.38 4.30
1360 3231 4.337304 TCCCAGCTCCAGCCTCCA 62.337 66.667 0.00 0.00 43.38 3.86
1368 3239 2.203549 CTCCAGCCTCCAGGGGAAAC 62.204 65.000 0.00 0.00 35.18 2.78
1370 3241 1.001641 CAGCCTCCAGGGGAAACTG 60.002 63.158 0.00 0.00 38.21 3.16
1381 3252 1.068588 GGGGAAACTGCAAACCAGAAC 59.931 52.381 0.00 0.00 44.64 3.01
1384 3255 2.293399 GGAAACTGCAAACCAGAACGAT 59.707 45.455 0.00 0.00 44.64 3.73
1385 3256 3.300009 GAAACTGCAAACCAGAACGATG 58.700 45.455 0.00 0.00 44.64 3.84
1386 3257 1.238439 ACTGCAAACCAGAACGATGG 58.762 50.000 0.00 0.00 44.64 3.51
1387 3258 0.523072 CTGCAAACCAGAACGATGGG 59.477 55.000 10.09 0.00 45.25 4.00
1388 3259 0.893270 TGCAAACCAGAACGATGGGG 60.893 55.000 10.09 0.00 45.25 4.96
1396 3267 0.253044 AGAACGATGGGGTGGTGATG 59.747 55.000 0.00 0.00 0.00 3.07
1414 3285 2.556144 TGATCATCAGGTGCCTATGC 57.444 50.000 0.00 0.00 38.26 3.14
1416 3287 3.242011 TGATCATCAGGTGCCTATGCTA 58.758 45.455 0.00 0.00 38.71 3.49
1418 3289 2.682594 TCATCAGGTGCCTATGCTACT 58.317 47.619 0.00 0.00 38.71 2.57
1422 3293 4.402056 TCAGGTGCCTATGCTACTTTAC 57.598 45.455 0.00 0.00 38.71 2.01
1423 3294 4.030913 TCAGGTGCCTATGCTACTTTACT 58.969 43.478 0.00 0.00 38.71 2.24
1432 3372 6.581542 GCCTATGCTACTTTACTGTACATACG 59.418 42.308 0.00 0.00 33.53 3.06
1444 3384 3.680642 GTACATACGTACAAGGAGCGA 57.319 47.619 0.00 0.00 46.18 4.93
1457 3397 2.350522 AGGAGCGATTTGTGCACTTAG 58.649 47.619 19.41 6.23 33.85 2.18
1482 3422 6.128929 GCAATGAACTTTAATTTGGTCGTTCC 60.129 38.462 0.00 0.00 32.11 3.62
1505 3451 1.153269 TCCGTGCAGCAAGTGTTGA 60.153 52.632 7.60 0.00 0.00 3.18
1512 3458 1.598130 AGCAAGTGTTGACGGAGGC 60.598 57.895 0.00 0.00 0.00 4.70
1524 3470 3.119096 GGAGGCGGCGAAGTTGAC 61.119 66.667 12.98 0.00 0.00 3.18
1537 3483 3.241900 CGAAGTTGACGCATGAGATTGAG 60.242 47.826 2.50 0.00 0.00 3.02
1607 3565 2.515290 TCGCCGAGCTCCACGATA 60.515 61.111 18.73 1.74 0.00 2.92
1642 3600 0.822121 GGTCGGCACTGGGAAAAGTT 60.822 55.000 0.00 0.00 0.00 2.66
1662 3624 5.866207 AGTTCGTCAAAGAAAGGTAGGATT 58.134 37.500 0.00 0.00 0.00 3.01
1665 3627 3.689649 CGTCAAAGAAAGGTAGGATTGGG 59.310 47.826 0.00 0.00 0.00 4.12
1669 3631 1.209747 AGAAAGGTAGGATTGGGTCGC 59.790 52.381 0.00 0.00 0.00 5.19
1680 3646 3.427503 GGATTGGGTCGCAGTACATTTTG 60.428 47.826 0.00 0.00 0.00 2.44
1689 3659 3.611293 CGCAGTACATTTTGCACATCCAA 60.611 43.478 5.76 0.00 40.28 3.53
1702 3672 3.181497 GCACATCCAACTGCGTTGATAAT 60.181 43.478 18.69 9.24 45.28 1.28
1704 3674 5.401550 CACATCCAACTGCGTTGATAATTT 58.598 37.500 18.69 4.61 45.28 1.82
1714 3684 3.780801 GCGTTGATAATTTTCACTGCTCG 59.219 43.478 11.74 7.66 0.00 5.03
1718 3688 4.912214 TGATAATTTTCACTGCTCGCATG 58.088 39.130 0.00 0.00 0.00 4.06
1719 3689 1.986698 AATTTTCACTGCTCGCATGC 58.013 45.000 7.91 7.91 0.00 4.06
1720 3690 0.883153 ATTTTCACTGCTCGCATGCA 59.117 45.000 19.57 4.02 41.05 3.96
1722 3692 0.667453 TTTCACTGCTCGCATGCAAA 59.333 45.000 19.57 4.96 42.83 3.68
1728 3698 0.249363 TGCTCGCATGCAAAGCAAAA 60.249 45.000 31.52 16.11 43.62 2.44
1729 3699 0.860533 GCTCGCATGCAAAGCAAAAA 59.139 45.000 28.10 0.33 43.62 1.94
1759 3729 2.634940 CCTCTCTTCCTCCTTGTGTTGA 59.365 50.000 0.00 0.00 0.00 3.18
1760 3730 3.556004 CCTCTCTTCCTCCTTGTGTTGAC 60.556 52.174 0.00 0.00 0.00 3.18
1761 3731 3.309296 TCTCTTCCTCCTTGTGTTGACT 58.691 45.455 0.00 0.00 0.00 3.41
1762 3732 3.070159 TCTCTTCCTCCTTGTGTTGACTG 59.930 47.826 0.00 0.00 0.00 3.51
1763 3733 2.771943 TCTTCCTCCTTGTGTTGACTGT 59.228 45.455 0.00 0.00 0.00 3.55
1764 3734 3.199946 TCTTCCTCCTTGTGTTGACTGTT 59.800 43.478 0.00 0.00 0.00 3.16
1765 3735 2.917933 TCCTCCTTGTGTTGACTGTTG 58.082 47.619 0.00 0.00 0.00 3.33
1766 3736 2.503765 TCCTCCTTGTGTTGACTGTTGA 59.496 45.455 0.00 0.00 0.00 3.18
1767 3737 3.136443 TCCTCCTTGTGTTGACTGTTGAT 59.864 43.478 0.00 0.00 0.00 2.57
1768 3738 3.499918 CCTCCTTGTGTTGACTGTTGATC 59.500 47.826 0.00 0.00 0.00 2.92
1769 3739 3.476552 TCCTTGTGTTGACTGTTGATCC 58.523 45.455 0.00 0.00 0.00 3.36
1782 3752 2.176148 TGTTGATCCATGGATGCAGGAT 59.824 45.455 32.05 14.87 44.53 3.24
1794 3764 2.975732 TGCAGGATGAGCTACTGAAG 57.024 50.000 10.35 0.00 39.69 3.02
1795 3765 1.134580 TGCAGGATGAGCTACTGAAGC 60.135 52.381 10.35 1.87 44.83 3.86
1796 3766 1.134580 GCAGGATGAGCTACTGAAGCA 60.135 52.381 10.35 0.00 46.01 3.91
1797 3767 3.059310 GCAGGATGAGCTACTGAAGCAG 61.059 54.545 10.35 0.00 46.01 4.24
1804 3774 3.149899 CTACTGAAGCAGCAGGGTG 57.850 57.895 10.11 0.00 40.20 4.61
1805 3775 0.610174 CTACTGAAGCAGCAGGGTGA 59.390 55.000 10.11 0.00 40.20 4.02
1806 3776 0.610174 TACTGAAGCAGCAGGGTGAG 59.390 55.000 10.11 0.00 40.20 3.51
1807 3777 2.033141 TGAAGCAGCAGGGTGAGC 59.967 61.111 2.13 0.00 0.00 4.26
1808 3778 2.350514 GAAGCAGCAGGGTGAGCT 59.649 61.111 2.13 0.00 44.62 4.09
1809 3779 2.842058 AAGCAGCAGGGTGAGCTT 59.158 55.556 2.13 0.00 41.14 3.74
1810 3780 1.303155 AAGCAGCAGGGTGAGCTTC 60.303 57.895 2.13 0.00 43.24 3.86
1811 3781 1.776975 AAGCAGCAGGGTGAGCTTCT 61.777 55.000 2.13 0.00 43.24 2.85
1812 3782 2.039405 GCAGCAGGGTGAGCTTCTG 61.039 63.158 2.13 0.00 41.14 3.02
1813 3783 1.675801 CAGCAGGGTGAGCTTCTGA 59.324 57.895 10.21 0.00 41.14 3.27
1814 3784 0.035881 CAGCAGGGTGAGCTTCTGAA 59.964 55.000 10.21 0.00 41.14 3.02
1818 3788 0.689623 AGGGTGAGCTTCTGAACCAG 59.310 55.000 0.00 0.00 34.18 4.00
1850 3820 0.315886 TCACATCGCAAGGTACGTGT 59.684 50.000 0.00 0.00 40.70 4.49
1854 3824 2.549282 CGCAAGGTACGTGTGTGC 59.451 61.111 0.00 1.54 42.96 4.57
1859 3898 4.261888 GGTACGTGTGTGCCTCAG 57.738 61.111 0.00 0.00 46.37 3.35
1863 3902 1.993370 GTACGTGTGTGCCTCAGATTC 59.007 52.381 0.00 0.00 0.00 2.52
1917 3956 4.575236 CCCAATGATGCTGCTATATGCTAG 59.425 45.833 0.00 0.00 43.37 3.42
1918 3957 5.183969 CCAATGATGCTGCTATATGCTAGT 58.816 41.667 0.00 0.00 43.37 2.57
1919 3958 6.343703 CCAATGATGCTGCTATATGCTAGTA 58.656 40.000 0.00 0.00 43.37 1.82
1948 3987 9.958234 ATCTATATATCATACATGAACGCAGTC 57.042 33.333 0.00 0.00 45.00 3.51
1949 3988 8.956426 TCTATATATCATACATGAACGCAGTCA 58.044 33.333 0.00 0.00 45.00 3.41
1950 3989 9.230932 CTATATATCATACATGAACGCAGTCAG 57.769 37.037 0.00 0.00 45.00 3.51
1951 3990 2.892374 TCATACATGAACGCAGTCAGG 58.108 47.619 0.00 0.00 45.00 3.86
1952 3991 1.328680 CATACATGAACGCAGTCAGGC 59.671 52.381 0.00 0.00 45.00 4.85
1953 3992 0.320050 TACATGAACGCAGTCAGGCA 59.680 50.000 0.00 0.00 45.00 4.75
1954 3993 0.952497 ACATGAACGCAGTCAGGCAG 60.952 55.000 0.00 0.00 45.00 4.85
1955 3994 1.376424 ATGAACGCAGTCAGGCAGG 60.376 57.895 0.00 0.00 45.00 4.85
1956 3995 1.830587 ATGAACGCAGTCAGGCAGGA 61.831 55.000 0.00 0.00 45.00 3.86
1957 3996 1.078848 GAACGCAGTCAGGCAGGAT 60.079 57.895 0.00 0.00 45.00 3.24
1958 3997 1.078848 AACGCAGTCAGGCAGGATC 60.079 57.895 0.00 0.00 45.00 3.36
1959 3998 2.584418 CGCAGTCAGGCAGGATCG 60.584 66.667 0.00 0.00 0.00 3.69
1960 3999 2.581354 GCAGTCAGGCAGGATCGT 59.419 61.111 0.00 0.00 0.00 3.73
1961 4000 1.812922 GCAGTCAGGCAGGATCGTG 60.813 63.158 11.07 11.07 0.00 4.35
1962 4001 1.812922 CAGTCAGGCAGGATCGTGC 60.813 63.158 28.01 28.01 43.19 5.34
1963 4002 1.986757 AGTCAGGCAGGATCGTGCT 60.987 57.895 32.44 19.42 43.45 4.40
1964 4003 1.812922 GTCAGGCAGGATCGTGCTG 60.813 63.158 32.44 26.99 43.45 4.41
1979 4018 3.473647 CTGCCGCAGAGGGGATGA 61.474 66.667 15.74 0.00 41.48 2.92
1980 4019 3.746949 CTGCCGCAGAGGGGATGAC 62.747 68.421 15.74 0.00 41.48 3.06
1981 4020 4.899239 GCCGCAGAGGGGATGACG 62.899 72.222 4.11 0.00 41.48 4.35
1982 4021 3.147595 CCGCAGAGGGGATGACGA 61.148 66.667 0.00 0.00 37.91 4.20
1983 4022 2.105128 CGCAGAGGGGATGACGAC 59.895 66.667 0.00 0.00 0.00 4.34
1984 4023 2.710902 CGCAGAGGGGATGACGACA 61.711 63.158 0.00 0.00 0.00 4.35
1985 4024 1.596934 GCAGAGGGGATGACGACAA 59.403 57.895 0.00 0.00 0.00 3.18
1986 4025 0.036388 GCAGAGGGGATGACGACAAA 60.036 55.000 0.00 0.00 0.00 2.83
1987 4026 1.610624 GCAGAGGGGATGACGACAAAA 60.611 52.381 0.00 0.00 0.00 2.44
1988 4027 2.076863 CAGAGGGGATGACGACAAAAC 58.923 52.381 0.00 0.00 0.00 2.43
1989 4028 1.697432 AGAGGGGATGACGACAAAACA 59.303 47.619 0.00 0.00 0.00 2.83
1990 4029 2.076863 GAGGGGATGACGACAAAACAG 58.923 52.381 0.00 0.00 0.00 3.16
1991 4030 1.697432 AGGGGATGACGACAAAACAGA 59.303 47.619 0.00 0.00 0.00 3.41
1992 4031 2.305927 AGGGGATGACGACAAAACAGAT 59.694 45.455 0.00 0.00 0.00 2.90
1993 4032 2.420022 GGGGATGACGACAAAACAGATG 59.580 50.000 0.00 0.00 0.00 2.90
1994 4033 2.159517 GGGATGACGACAAAACAGATGC 60.160 50.000 0.00 0.00 0.00 3.91
1995 4034 2.744202 GGATGACGACAAAACAGATGCT 59.256 45.455 0.00 0.00 0.00 3.79
1996 4035 3.932710 GGATGACGACAAAACAGATGCTA 59.067 43.478 0.00 0.00 0.00 3.49
1997 4036 4.391830 GGATGACGACAAAACAGATGCTAA 59.608 41.667 0.00 0.00 0.00 3.09
1998 4037 5.065218 GGATGACGACAAAACAGATGCTAAT 59.935 40.000 0.00 0.00 0.00 1.73
1999 4038 5.281693 TGACGACAAAACAGATGCTAATG 57.718 39.130 0.00 0.00 0.00 1.90
2000 4039 4.154015 TGACGACAAAACAGATGCTAATGG 59.846 41.667 0.00 0.00 0.00 3.16
2001 4040 3.119849 ACGACAAAACAGATGCTAATGGC 60.120 43.478 0.00 0.00 42.22 4.40
2002 4041 3.731867 CGACAAAACAGATGCTAATGGCC 60.732 47.826 0.00 0.00 40.92 5.36
2003 4042 3.434309 ACAAAACAGATGCTAATGGCCT 58.566 40.909 3.32 0.00 40.92 5.19
2004 4043 3.445096 ACAAAACAGATGCTAATGGCCTC 59.555 43.478 3.32 0.00 40.92 4.70
2005 4044 1.959042 AACAGATGCTAATGGCCTCG 58.041 50.000 3.32 0.00 39.90 4.63
2006 4045 0.107456 ACAGATGCTAATGGCCTCGG 59.893 55.000 3.32 0.00 39.90 4.63
2007 4046 1.072159 AGATGCTAATGGCCTCGGC 59.928 57.895 3.32 0.00 39.90 5.54
2008 4047 2.281070 ATGCTAATGGCCTCGGCG 60.281 61.111 3.32 0.00 43.06 6.46
2009 4048 3.832237 ATGCTAATGGCCTCGGCGG 62.832 63.158 7.21 0.00 43.06 6.13
2026 4065 4.821589 GCGTTCCTGGAGCCCGAG 62.822 72.222 14.18 0.00 0.00 4.63
2027 4066 4.148825 CGTTCCTGGAGCCCGAGG 62.149 72.222 4.87 0.00 0.00 4.63
2043 4082 3.033764 GGCGTCGACGTCAAAGCA 61.034 61.111 35.32 0.00 44.43 3.91
2044 4083 2.465920 GCGTCGACGTCAAAGCAG 59.534 61.111 35.48 8.32 42.22 4.24
2045 4084 2.465920 CGTCGACGTCAAAGCAGC 59.534 61.111 29.08 0.00 34.11 5.25
2046 4085 2.853914 GTCGACGTCAAAGCAGCC 59.146 61.111 17.16 0.00 0.00 4.85
2047 4086 2.733218 TCGACGTCAAAGCAGCCG 60.733 61.111 17.16 0.00 0.00 5.52
2048 4087 4.430423 CGACGTCAAAGCAGCCGC 62.430 66.667 17.16 0.00 38.99 6.53
2049 4088 4.090057 GACGTCAAAGCAGCCGCC 62.090 66.667 11.55 0.00 39.83 6.13
2068 4107 4.832608 CCGTTGCCGTAGCTCCCC 62.833 72.222 0.00 0.00 40.80 4.81
2070 4109 3.766691 GTTGCCGTAGCTCCCCGA 61.767 66.667 0.00 0.00 40.80 5.14
2071 4110 3.458163 TTGCCGTAGCTCCCCGAG 61.458 66.667 0.00 0.00 40.80 4.63
2072 4111 3.949885 TTGCCGTAGCTCCCCGAGA 62.950 63.158 0.00 0.00 40.80 4.04
2073 4112 3.902086 GCCGTAGCTCCCCGAGAC 61.902 72.222 0.00 0.00 35.50 3.36
2074 4113 3.584052 CCGTAGCTCCCCGAGACG 61.584 72.222 0.00 0.00 32.29 4.18
2075 4114 2.823147 CGTAGCTCCCCGAGACGT 60.823 66.667 0.00 0.00 29.39 4.34
2076 4115 2.799371 GTAGCTCCCCGAGACGTG 59.201 66.667 0.00 0.00 0.00 4.49
2077 4116 1.748122 GTAGCTCCCCGAGACGTGA 60.748 63.158 0.00 0.00 0.00 4.35
2078 4117 1.451567 TAGCTCCCCGAGACGTGAG 60.452 63.158 0.00 0.00 0.00 3.51
2079 4118 4.500116 GCTCCCCGAGACGTGAGC 62.500 72.222 7.45 7.45 40.50 4.26
2080 4119 2.752238 CTCCCCGAGACGTGAGCT 60.752 66.667 0.00 0.00 0.00 4.09
2081 4120 3.057547 CTCCCCGAGACGTGAGCTG 62.058 68.421 0.00 0.00 0.00 4.24
2082 4121 4.803426 CCCCGAGACGTGAGCTGC 62.803 72.222 0.00 0.00 0.00 5.25
2083 4122 3.753434 CCCGAGACGTGAGCTGCT 61.753 66.667 0.00 0.00 0.00 4.24
2084 4123 2.259818 CCGAGACGTGAGCTGCTT 59.740 61.111 2.53 0.00 0.00 3.91
2085 4124 1.803519 CCGAGACGTGAGCTGCTTC 60.804 63.158 2.53 0.00 0.00 3.86
2086 4125 2.148982 CGAGACGTGAGCTGCTTCG 61.149 63.158 20.38 20.38 0.00 3.79
2087 4126 2.431601 AGACGTGAGCTGCTTCGC 60.432 61.111 21.37 15.87 0.00 4.70
2088 4127 3.482783 GACGTGAGCTGCTTCGCC 61.483 66.667 21.37 11.69 0.00 5.54
2090 4129 4.749310 CGTGAGCTGCTTCGCCCT 62.749 66.667 2.53 0.00 0.00 5.19
2091 4130 3.123620 GTGAGCTGCTTCGCCCTG 61.124 66.667 2.53 0.00 0.00 4.45
2092 4131 4.399395 TGAGCTGCTTCGCCCTGG 62.399 66.667 2.53 0.00 0.00 4.45
2093 4132 4.087892 GAGCTGCTTCGCCCTGGA 62.088 66.667 2.53 0.00 0.00 3.86
2094 4133 4.093291 AGCTGCTTCGCCCTGGAG 62.093 66.667 0.00 0.00 0.00 3.86
2096 4135 3.393970 CTGCTTCGCCCTGGAGGA 61.394 66.667 0.00 0.00 38.24 3.71
2097 4136 2.688666 TGCTTCGCCCTGGAGGAT 60.689 61.111 0.00 0.00 38.24 3.24
2098 4137 2.203126 GCTTCGCCCTGGAGGATG 60.203 66.667 0.00 0.00 38.24 3.51
2099 4138 3.036429 GCTTCGCCCTGGAGGATGT 62.036 63.158 0.00 0.00 38.24 3.06
2100 4139 1.686325 GCTTCGCCCTGGAGGATGTA 61.686 60.000 0.00 0.00 38.24 2.29
2101 4140 1.051812 CTTCGCCCTGGAGGATGTAT 58.948 55.000 0.00 0.00 38.24 2.29
2102 4141 1.001406 CTTCGCCCTGGAGGATGTATC 59.999 57.143 0.00 0.00 38.24 2.24
2103 4142 0.105709 TCGCCCTGGAGGATGTATCA 60.106 55.000 0.00 0.00 38.24 2.15
2104 4143 0.979665 CGCCCTGGAGGATGTATCAT 59.020 55.000 0.00 0.00 38.24 2.45
2105 4144 1.338484 CGCCCTGGAGGATGTATCATG 60.338 57.143 0.00 0.00 38.24 3.07
2106 4145 1.612726 GCCCTGGAGGATGTATCATGC 60.613 57.143 0.00 0.00 38.24 4.06
2107 4146 1.004044 CCCTGGAGGATGTATCATGCC 59.996 57.143 0.00 0.00 38.24 4.40
2108 4147 1.701292 CCTGGAGGATGTATCATGCCA 59.299 52.381 0.00 0.00 37.39 4.92
2109 4148 2.307980 CCTGGAGGATGTATCATGCCAT 59.692 50.000 0.00 0.00 37.39 4.40
2110 4149 3.520721 CCTGGAGGATGTATCATGCCATA 59.479 47.826 0.00 0.00 37.39 2.74
2111 4150 4.511527 CTGGAGGATGTATCATGCCATAC 58.488 47.826 0.00 0.00 0.00 2.39
2112 4151 3.909364 TGGAGGATGTATCATGCCATACA 59.091 43.478 9.08 9.08 42.22 2.29
2113 4152 4.350520 TGGAGGATGTATCATGCCATACAA 59.649 41.667 10.35 0.00 41.52 2.41
2114 4153 4.940046 GGAGGATGTATCATGCCATACAAG 59.060 45.833 10.35 0.00 41.52 3.16
2115 4154 4.330250 AGGATGTATCATGCCATACAAGC 58.670 43.478 10.35 6.73 41.52 4.01
2116 4155 4.042560 AGGATGTATCATGCCATACAAGCT 59.957 41.667 10.35 0.00 41.52 3.74
2117 4156 4.394300 GGATGTATCATGCCATACAAGCTC 59.606 45.833 10.35 5.24 41.52 4.09
2118 4157 4.694760 TGTATCATGCCATACAAGCTCT 57.305 40.909 5.08 0.00 36.50 4.09
2119 4158 5.806654 TGTATCATGCCATACAAGCTCTA 57.193 39.130 5.08 0.00 36.50 2.43
2120 4159 5.541845 TGTATCATGCCATACAAGCTCTAC 58.458 41.667 5.08 0.00 36.50 2.59
2121 4160 3.097877 TCATGCCATACAAGCTCTACG 57.902 47.619 0.00 0.00 0.00 3.51
2122 4161 2.693074 TCATGCCATACAAGCTCTACGA 59.307 45.455 0.00 0.00 0.00 3.43
2123 4162 3.321968 TCATGCCATACAAGCTCTACGAT 59.678 43.478 0.00 0.00 0.00 3.73
2124 4163 3.097877 TGCCATACAAGCTCTACGATG 57.902 47.619 0.00 0.00 0.00 3.84
2125 4164 1.795286 GCCATACAAGCTCTACGATGC 59.205 52.381 0.00 0.00 0.00 3.91
2126 4165 2.054363 CCATACAAGCTCTACGATGCG 58.946 52.381 0.00 0.00 0.00 4.73
2127 4166 2.287608 CCATACAAGCTCTACGATGCGA 60.288 50.000 0.00 0.00 0.00 5.10
2128 4167 3.372060 CATACAAGCTCTACGATGCGAA 58.628 45.455 0.00 0.00 0.00 4.70
2129 4168 2.586258 ACAAGCTCTACGATGCGAAT 57.414 45.000 0.00 0.00 0.00 3.34
2130 4169 3.710326 ACAAGCTCTACGATGCGAATA 57.290 42.857 0.00 0.00 0.00 1.75
2131 4170 4.041740 ACAAGCTCTACGATGCGAATAA 57.958 40.909 0.00 0.00 0.00 1.40
2132 4171 4.430007 ACAAGCTCTACGATGCGAATAAA 58.570 39.130 0.00 0.00 0.00 1.40
2133 4172 4.267928 ACAAGCTCTACGATGCGAATAAAC 59.732 41.667 0.00 0.00 0.00 2.01
2134 4173 4.041740 AGCTCTACGATGCGAATAAACA 57.958 40.909 0.00 0.00 0.00 2.83
2135 4174 3.797256 AGCTCTACGATGCGAATAAACAC 59.203 43.478 0.00 0.00 0.00 3.32
2136 4175 3.360765 GCTCTACGATGCGAATAAACACG 60.361 47.826 0.00 0.00 0.00 4.49
2137 4176 2.532723 TCTACGATGCGAATAAACACGC 59.467 45.455 0.00 0.00 0.00 5.34
2138 4177 1.355971 ACGATGCGAATAAACACGCT 58.644 45.000 12.31 0.00 0.00 5.07
2139 4178 1.323534 ACGATGCGAATAAACACGCTC 59.676 47.619 12.31 6.92 0.00 5.03
2140 4179 1.323235 CGATGCGAATAAACACGCTCA 59.677 47.619 12.31 0.00 0.00 4.26
2141 4180 2.694043 GATGCGAATAAACACGCTCAC 58.306 47.619 12.31 1.53 0.00 3.51
2142 4181 1.790755 TGCGAATAAACACGCTCACT 58.209 45.000 12.31 0.00 0.00 3.41
2143 4182 1.459209 TGCGAATAAACACGCTCACTG 59.541 47.619 12.31 0.00 0.00 3.66
2144 4183 1.786928 GCGAATAAACACGCTCACTGC 60.787 52.381 0.00 0.00 38.57 4.40
2145 4184 1.726791 CGAATAAACACGCTCACTGCT 59.273 47.619 0.00 0.00 40.11 4.24
2146 4185 2.921121 CGAATAAACACGCTCACTGCTA 59.079 45.455 0.00 0.00 40.11 3.49
2147 4186 3.000674 CGAATAAACACGCTCACTGCTAG 60.001 47.826 0.00 0.00 40.11 3.42
2148 4187 3.594603 ATAAACACGCTCACTGCTAGT 57.405 42.857 0.00 0.00 40.11 2.57
2149 4188 4.713824 ATAAACACGCTCACTGCTAGTA 57.286 40.909 0.00 0.00 40.11 1.82
2150 4189 2.638556 AACACGCTCACTGCTAGTAG 57.361 50.000 6.26 6.26 40.11 2.57
2151 4190 0.171455 ACACGCTCACTGCTAGTAGC 59.829 55.000 15.56 15.56 42.82 3.58
2152 4191 0.453793 CACGCTCACTGCTAGTAGCT 59.546 55.000 22.34 0.59 42.97 3.32
2153 4192 1.671328 CACGCTCACTGCTAGTAGCTA 59.329 52.381 22.34 8.62 42.97 3.32
2154 4193 1.671845 ACGCTCACTGCTAGTAGCTAC 59.328 52.381 22.34 16.43 42.97 3.58
2155 4194 1.944024 CGCTCACTGCTAGTAGCTACT 59.056 52.381 28.50 28.50 42.97 2.57
2156 4195 2.356382 CGCTCACTGCTAGTAGCTACTT 59.644 50.000 30.40 15.09 42.97 2.24
2157 4196 3.547214 CGCTCACTGCTAGTAGCTACTTC 60.547 52.174 30.40 21.59 42.97 3.01
2158 4197 3.378742 GCTCACTGCTAGTAGCTACTTCA 59.621 47.826 30.40 24.44 42.97 3.02
2159 4198 4.037446 GCTCACTGCTAGTAGCTACTTCAT 59.963 45.833 30.40 10.07 42.97 2.57
2160 4199 5.239744 GCTCACTGCTAGTAGCTACTTCATA 59.760 44.000 30.40 12.47 42.97 2.15
2161 4200 6.621316 TCACTGCTAGTAGCTACTTCATAC 57.379 41.667 30.40 15.76 42.97 2.39
2162 4201 6.120220 TCACTGCTAGTAGCTACTTCATACA 58.880 40.000 30.40 18.90 42.97 2.29
2163 4202 6.773200 TCACTGCTAGTAGCTACTTCATACAT 59.227 38.462 30.40 7.45 42.97 2.29
2164 4203 7.041030 TCACTGCTAGTAGCTACTTCATACATC 60.041 40.741 30.40 8.64 42.97 3.06
2165 4204 6.207810 ACTGCTAGTAGCTACTTCATACATCC 59.792 42.308 30.40 9.69 42.97 3.51
2166 4205 5.181433 TGCTAGTAGCTACTTCATACATCCG 59.819 44.000 30.40 2.87 42.97 4.18
2167 4206 5.181622 GCTAGTAGCTACTTCATACATCCGT 59.818 44.000 30.40 5.25 38.45 4.69
2168 4207 6.370994 GCTAGTAGCTACTTCATACATCCGTA 59.629 42.308 30.40 7.76 38.45 4.02
2169 4208 7.066043 GCTAGTAGCTACTTCATACATCCGTAT 59.934 40.741 30.40 4.15 38.45 3.06
2170 4209 7.380431 AGTAGCTACTTCATACATCCGTATC 57.620 40.000 20.95 0.00 32.41 2.24
2171 4210 7.169591 AGTAGCTACTTCATACATCCGTATCT 58.830 38.462 20.95 0.00 32.41 1.98
2172 4211 8.319881 AGTAGCTACTTCATACATCCGTATCTA 58.680 37.037 20.95 0.00 32.41 1.98
2173 4212 7.618502 AGCTACTTCATACATCCGTATCTAG 57.381 40.000 0.00 0.00 36.11 2.43
2174 4213 7.395617 AGCTACTTCATACATCCGTATCTAGA 58.604 38.462 0.00 0.00 36.11 2.43
2175 4214 7.334921 AGCTACTTCATACATCCGTATCTAGAC 59.665 40.741 0.00 0.00 36.11 2.59
2176 4215 7.119407 GCTACTTCATACATCCGTATCTAGACA 59.881 40.741 0.00 0.00 36.11 3.41
2177 4216 7.818997 ACTTCATACATCCGTATCTAGACAA 57.181 36.000 0.00 0.00 36.11 3.18
2178 4217 8.234136 ACTTCATACATCCGTATCTAGACAAA 57.766 34.615 0.00 0.00 36.11 2.83
2179 4218 8.861086 ACTTCATACATCCGTATCTAGACAAAT 58.139 33.333 0.00 0.00 36.11 2.32
2180 4219 9.347934 CTTCATACATCCGTATCTAGACAAATC 57.652 37.037 0.00 0.00 36.11 2.17
2181 4220 8.637196 TCATACATCCGTATCTAGACAAATCT 57.363 34.615 0.00 0.00 36.11 2.40
2182 4221 9.734984 TCATACATCCGTATCTAGACAAATCTA 57.265 33.333 0.00 0.00 36.11 1.98
2185 4224 8.693120 ACATCCGTATCTAGACAAATCTAAGA 57.307 34.615 0.00 0.00 36.98 2.10
2186 4225 8.569641 ACATCCGTATCTAGACAAATCTAAGAC 58.430 37.037 0.00 0.00 36.98 3.01
2187 4226 8.568794 CATCCGTATCTAGACAAATCTAAGACA 58.431 37.037 0.00 0.00 36.98 3.41
2188 4227 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
2189 4228 8.963725 TCCGTATCTAGACAAATCTAAGACAAA 58.036 33.333 0.00 0.00 36.98 2.83
2190 4229 9.582431 CCGTATCTAGACAAATCTAAGACAAAA 57.418 33.333 0.00 0.00 36.98 2.44
2198 4237 9.546428 AGACAAATCTAAGACAAAAATTTTGGG 57.454 29.630 20.79 5.88 31.46 4.12
2199 4238 9.541143 GACAAATCTAAGACAAAAATTTTGGGA 57.459 29.630 20.79 11.34 0.00 4.37
2200 4239 9.325198 ACAAATCTAAGACAAAAATTTTGGGAC 57.675 29.630 20.79 12.19 0.00 4.46
2201 4240 8.487176 CAAATCTAAGACAAAAATTTTGGGACG 58.513 33.333 20.79 6.95 0.00 4.79
2202 4241 6.079424 TCTAAGACAAAAATTTTGGGACGG 57.921 37.500 20.79 9.23 0.00 4.79
2203 4242 5.828859 TCTAAGACAAAAATTTTGGGACGGA 59.171 36.000 20.79 11.04 0.00 4.69
2204 4243 4.584327 AGACAAAAATTTTGGGACGGAG 57.416 40.909 20.79 0.00 0.00 4.63
2205 4244 3.320826 AGACAAAAATTTTGGGACGGAGG 59.679 43.478 20.79 0.00 0.00 4.30
2206 4245 2.367241 ACAAAAATTTTGGGACGGAGGG 59.633 45.455 20.79 0.00 0.00 4.30
2207 4246 2.367241 CAAAAATTTTGGGACGGAGGGT 59.633 45.455 10.41 0.00 0.00 4.34
2208 4247 3.529216 AAAATTTTGGGACGGAGGGTA 57.471 42.857 1.75 0.00 0.00 3.69
2209 4248 2.502142 AATTTTGGGACGGAGGGTAC 57.498 50.000 0.00 0.00 0.00 3.34
2210 4249 1.364269 ATTTTGGGACGGAGGGTACA 58.636 50.000 0.00 0.00 0.00 2.90
2211 4250 1.364269 TTTTGGGACGGAGGGTACAT 58.636 50.000 0.00 0.00 0.00 2.29
2212 4251 0.906775 TTTGGGACGGAGGGTACATC 59.093 55.000 0.00 0.00 0.00 3.06
2213 4252 0.979187 TTGGGACGGAGGGTACATCC 60.979 60.000 6.33 6.33 0.00 3.51
2222 4261 4.298103 GGAGGGTACATCCGTATCTAGA 57.702 50.000 0.00 0.00 37.00 2.43
2223 4262 4.009002 GGAGGGTACATCCGTATCTAGAC 58.991 52.174 0.00 0.00 37.00 2.59
2224 4263 4.506271 GGAGGGTACATCCGTATCTAGACA 60.506 50.000 0.00 0.00 37.00 3.41
2225 4264 5.057843 AGGGTACATCCGTATCTAGACAA 57.942 43.478 0.00 0.00 37.00 3.18
2226 4265 5.452255 AGGGTACATCCGTATCTAGACAAA 58.548 41.667 0.00 0.00 37.00 2.83
2227 4266 6.075984 AGGGTACATCCGTATCTAGACAAAT 58.924 40.000 0.00 0.00 37.00 2.32
2228 4267 6.208994 AGGGTACATCCGTATCTAGACAAATC 59.791 42.308 0.00 0.00 37.00 2.17
2229 4268 6.208994 GGGTACATCCGTATCTAGACAAATCT 59.791 42.308 0.00 0.00 36.62 2.40
2230 4269 7.392673 GGGTACATCCGTATCTAGACAAATCTA 59.607 40.741 0.00 0.00 35.09 1.98
2231 4270 8.790718 GGTACATCCGTATCTAGACAAATCTAA 58.209 37.037 0.00 0.00 36.98 2.10
2232 4271 9.828852 GTACATCCGTATCTAGACAAATCTAAG 57.171 37.037 0.00 0.00 36.98 2.18
2233 4272 8.693120 ACATCCGTATCTAGACAAATCTAAGA 57.307 34.615 0.00 0.00 36.98 2.10
2234 4273 9.303116 ACATCCGTATCTAGACAAATCTAAGAT 57.697 33.333 0.00 0.00 36.98 2.40
2254 4293 9.336171 CTAAGATAAGAATTTTGAGAAGGAGGG 57.664 37.037 0.00 0.00 0.00 4.30
2255 4294 7.516450 AGATAAGAATTTTGAGAAGGAGGGA 57.484 36.000 0.00 0.00 0.00 4.20
2256 4295 7.572814 AGATAAGAATTTTGAGAAGGAGGGAG 58.427 38.462 0.00 0.00 0.00 4.30
2257 4296 5.590976 AAGAATTTTGAGAAGGAGGGAGT 57.409 39.130 0.00 0.00 0.00 3.85
2258 4297 6.704056 AAGAATTTTGAGAAGGAGGGAGTA 57.296 37.500 0.00 0.00 0.00 2.59
2259 4298 6.056090 AGAATTTTGAGAAGGAGGGAGTAC 57.944 41.667 0.00 0.00 0.00 2.73
2260 4299 5.788014 AGAATTTTGAGAAGGAGGGAGTACT 59.212 40.000 0.00 0.00 0.00 2.73
2261 4300 6.960542 AGAATTTTGAGAAGGAGGGAGTACTA 59.039 38.462 0.00 0.00 0.00 1.82
2262 4301 6.800072 ATTTTGAGAAGGAGGGAGTACTAG 57.200 41.667 0.00 0.00 0.00 2.57
2263 4302 3.300239 TGAGAAGGAGGGAGTACTAGC 57.700 52.381 0.00 0.00 0.00 3.42
2264 4303 2.853707 TGAGAAGGAGGGAGTACTAGCT 59.146 50.000 0.00 0.00 0.00 3.32
2265 4304 4.045736 TGAGAAGGAGGGAGTACTAGCTA 58.954 47.826 0.00 0.00 0.00 3.32
2266 4305 4.103469 TGAGAAGGAGGGAGTACTAGCTAG 59.897 50.000 19.44 19.44 0.00 3.42
2267 4306 4.049318 AGAAGGAGGGAGTACTAGCTAGT 58.951 47.826 28.50 28.50 40.24 2.57
2268 4307 5.226015 AGAAGGAGGGAGTACTAGCTAGTA 58.774 45.833 26.36 26.36 37.73 1.82
2281 4320 6.394025 ACTAGCTAGTACTATTGCTCAACC 57.606 41.667 24.97 0.00 37.02 3.77
2282 4321 5.892119 ACTAGCTAGTACTATTGCTCAACCA 59.108 40.000 24.97 2.69 37.02 3.67
2283 4322 5.878406 AGCTAGTACTATTGCTCAACCAT 57.122 39.130 10.13 0.00 0.00 3.55
2284 4323 6.240549 AGCTAGTACTATTGCTCAACCATT 57.759 37.500 10.13 0.00 0.00 3.16
2285 4324 6.051717 AGCTAGTACTATTGCTCAACCATTG 58.948 40.000 10.13 0.00 0.00 2.82
2286 4325 5.817816 GCTAGTACTATTGCTCAACCATTGT 59.182 40.000 2.33 0.00 0.00 2.71
2287 4326 6.316390 GCTAGTACTATTGCTCAACCATTGTT 59.684 38.462 2.33 0.00 34.14 2.83
2288 4327 7.494625 GCTAGTACTATTGCTCAACCATTGTTA 59.505 37.037 2.33 0.00 32.09 2.41
2289 4328 7.849804 AGTACTATTGCTCAACCATTGTTAG 57.150 36.000 0.00 0.00 32.09 2.34
2290 4329 7.620880 AGTACTATTGCTCAACCATTGTTAGA 58.379 34.615 0.00 0.00 32.09 2.10
2291 4330 6.743575 ACTATTGCTCAACCATTGTTAGAC 57.256 37.500 0.00 0.00 32.09 2.59
2292 4331 6.476378 ACTATTGCTCAACCATTGTTAGACT 58.524 36.000 0.00 0.00 32.09 3.24
2293 4332 7.620880 ACTATTGCTCAACCATTGTTAGACTA 58.379 34.615 0.00 0.00 32.09 2.59
2294 4333 8.267894 ACTATTGCTCAACCATTGTTAGACTAT 58.732 33.333 0.00 0.00 32.09 2.12
2295 4334 6.741992 TTGCTCAACCATTGTTAGACTATG 57.258 37.500 0.00 0.00 32.09 2.23
2296 4335 5.804639 TGCTCAACCATTGTTAGACTATGT 58.195 37.500 2.77 0.00 31.02 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 106 2.267961 GACGGCCGAGAAACCCAT 59.732 61.111 35.90 5.18 0.00 4.00
152 153 4.129737 TCTACCGTGGCTGCTCGC 62.130 66.667 0.00 0.00 38.13 5.03
159 160 1.103803 TGATGACTCTCTACCGTGGC 58.896 55.000 0.00 0.00 0.00 5.01
164 165 2.294791 CGGGACATGATGACTCTCTACC 59.705 54.545 0.00 0.00 0.00 3.18
175 176 1.261938 TTGACCGGACGGGACATGAT 61.262 55.000 9.46 0.00 40.18 2.45
189 190 1.848886 AATCCCGGGGACACTTGACC 61.849 60.000 23.50 0.00 32.98 4.02
197 198 1.077716 CCTGTTCAATCCCGGGGAC 60.078 63.158 23.50 12.32 32.98 4.46
203 204 1.480954 TCTCTACGCCTGTTCAATCCC 59.519 52.381 0.00 0.00 0.00 3.85
214 215 2.772691 CGGTCCTGGTCTCTACGCC 61.773 68.421 0.00 0.00 0.00 5.68
218 219 3.890527 GGTACGGTCCTGGTCTCTA 57.109 57.895 0.00 0.00 0.00 2.43
219 220 4.759893 GGTACGGTCCTGGTCTCT 57.240 61.111 0.00 0.00 0.00 3.10
244 245 0.662374 GACGTTCACTCGAGCCGAAA 60.662 55.000 13.61 0.00 34.74 3.46
253 254 2.708059 GCAGACGCGACGTTCACTC 61.708 63.158 15.93 0.00 41.37 3.51
311 312 2.537560 CGCCATCTCCCGCATGAAC 61.538 63.158 0.00 0.00 0.00 3.18
354 355 2.232941 CCACATACGTGTCCTACACCTT 59.767 50.000 0.00 0.00 45.93 3.50
355 356 1.822990 CCACATACGTGTCCTACACCT 59.177 52.381 0.00 0.00 45.93 4.00
364 365 2.047655 CCACCGCCACATACGTGT 60.048 61.111 0.00 0.00 41.93 4.49
391 392 3.617263 ACGTAAATTAGAGGAGCTTTGCG 59.383 43.478 0.00 0.00 40.77 4.85
397 398 2.100418 ACCGGACGTAAATTAGAGGAGC 59.900 50.000 9.46 0.00 0.00 4.70
445 446 2.845752 TACCACATTCGCCCGCAGAC 62.846 60.000 0.00 0.00 0.00 3.51
447 448 2.125310 TACCACATTCGCCCGCAG 60.125 61.111 0.00 0.00 0.00 5.18
448 449 2.435234 GTACCACATTCGCCCGCA 60.435 61.111 0.00 0.00 0.00 5.69
455 456 1.094785 AGCAATGCGGTACCACATTC 58.905 50.000 22.49 17.04 34.32 2.67
486 487 2.604046 AACATCAGGACATAGCCGTC 57.396 50.000 0.00 0.00 35.03 4.79
489 490 3.629398 CCTCAAAACATCAGGACATAGCC 59.371 47.826 0.00 0.00 0.00 3.93
513 514 2.401195 GAGCATCTTCAACGCGGC 59.599 61.111 12.47 0.36 0.00 6.53
535 536 3.582120 CACCACACCCACACACGC 61.582 66.667 0.00 0.00 0.00 5.34
537 538 0.108585 ATCTCACCACACCCACACAC 59.891 55.000 0.00 0.00 0.00 3.82
538 539 0.108396 CATCTCACCACACCCACACA 59.892 55.000 0.00 0.00 0.00 3.72
539 540 0.396435 TCATCTCACCACACCCACAC 59.604 55.000 0.00 0.00 0.00 3.82
540 541 0.396435 GTCATCTCACCACACCCACA 59.604 55.000 0.00 0.00 0.00 4.17
544 545 2.550830 AGTTGTCATCTCACCACACC 57.449 50.000 0.00 0.00 0.00 4.16
601 602 5.968676 ATTTGCCACTTACATCCCTAGTA 57.031 39.130 0.00 0.00 0.00 1.82
602 603 4.862641 ATTTGCCACTTACATCCCTAGT 57.137 40.909 0.00 0.00 0.00 2.57
603 604 7.255590 CCATTTATTTGCCACTTACATCCCTAG 60.256 40.741 0.00 0.00 0.00 3.02
604 605 6.549364 CCATTTATTTGCCACTTACATCCCTA 59.451 38.462 0.00 0.00 0.00 3.53
605 606 5.363580 CCATTTATTTGCCACTTACATCCCT 59.636 40.000 0.00 0.00 0.00 4.20
606 607 5.600696 CCATTTATTTGCCACTTACATCCC 58.399 41.667 0.00 0.00 0.00 3.85
607 608 5.049828 GCCATTTATTTGCCACTTACATCC 58.950 41.667 0.00 0.00 0.00 3.51
608 609 4.739716 CGCCATTTATTTGCCACTTACATC 59.260 41.667 0.00 0.00 0.00 3.06
609 610 4.159506 ACGCCATTTATTTGCCACTTACAT 59.840 37.500 0.00 0.00 0.00 2.29
610 611 3.508012 ACGCCATTTATTTGCCACTTACA 59.492 39.130 0.00 0.00 0.00 2.41
611 612 4.102649 GACGCCATTTATTTGCCACTTAC 58.897 43.478 0.00 0.00 0.00 2.34
612 613 3.129638 GGACGCCATTTATTTGCCACTTA 59.870 43.478 0.00 0.00 0.00 2.24
613 614 2.094234 GGACGCCATTTATTTGCCACTT 60.094 45.455 0.00 0.00 0.00 3.16
614 615 1.476488 GGACGCCATTTATTTGCCACT 59.524 47.619 0.00 0.00 0.00 4.00
615 616 1.203523 TGGACGCCATTTATTTGCCAC 59.796 47.619 0.00 0.00 0.00 5.01
616 617 1.203523 GTGGACGCCATTTATTTGCCA 59.796 47.619 1.90 0.00 35.28 4.92
617 618 1.203523 TGTGGACGCCATTTATTTGCC 59.796 47.619 1.90 0.00 35.28 4.52
618 619 2.645730 TGTGGACGCCATTTATTTGC 57.354 45.000 1.90 0.00 35.28 3.68
619 620 2.923020 GCTTGTGGACGCCATTTATTTG 59.077 45.455 1.90 0.00 35.28 2.32
620 621 2.094234 GGCTTGTGGACGCCATTTATTT 60.094 45.455 1.90 0.00 45.59 1.40
621 622 1.476488 GGCTTGTGGACGCCATTTATT 59.524 47.619 1.90 0.00 45.59 1.40
622 623 1.102978 GGCTTGTGGACGCCATTTAT 58.897 50.000 1.90 0.00 45.59 1.40
623 624 2.562125 GGCTTGTGGACGCCATTTA 58.438 52.632 1.90 0.00 45.59 1.40
624 625 3.365535 GGCTTGTGGACGCCATTT 58.634 55.556 1.90 0.00 45.59 2.32
629 630 1.908066 CTAAACGGGCTTGTGGACGC 61.908 60.000 0.00 0.00 0.00 5.19
630 631 0.601841 ACTAAACGGGCTTGTGGACG 60.602 55.000 0.00 0.00 0.00 4.79
631 632 1.601166 AACTAAACGGGCTTGTGGAC 58.399 50.000 0.00 0.00 0.00 4.02
632 633 2.633967 TCTAACTAAACGGGCTTGTGGA 59.366 45.455 0.00 0.00 0.00 4.02
633 634 3.048337 TCTAACTAAACGGGCTTGTGG 57.952 47.619 0.00 0.00 0.00 4.17
634 635 5.622770 AAATCTAACTAAACGGGCTTGTG 57.377 39.130 0.00 0.00 0.00 3.33
635 636 6.644248 AAAAATCTAACTAAACGGGCTTGT 57.356 33.333 0.00 0.00 0.00 3.16
709 710 9.563748 CCCGTTTAAAGTCCATTTATAATAGGA 57.436 33.333 3.04 3.04 33.40 2.94
710 711 9.563748 TCCCGTTTAAAGTCCATTTATAATAGG 57.436 33.333 0.00 0.00 33.40 2.57
718 719 8.038351 CCATTTAATCCCGTTTAAAGTCCATTT 58.962 33.333 0.00 0.00 35.24 2.32
719 720 7.364320 CCCATTTAATCCCGTTTAAAGTCCATT 60.364 37.037 0.00 0.00 35.24 3.16
720 721 6.097696 CCCATTTAATCCCGTTTAAAGTCCAT 59.902 38.462 0.00 0.00 35.24 3.41
721 722 5.419471 CCCATTTAATCCCGTTTAAAGTCCA 59.581 40.000 0.00 0.00 35.24 4.02
722 723 5.653330 TCCCATTTAATCCCGTTTAAAGTCC 59.347 40.000 0.00 0.00 35.24 3.85
723 724 6.762702 TCCCATTTAATCCCGTTTAAAGTC 57.237 37.500 0.00 0.00 35.24 3.01
724 725 6.322969 GGATCCCATTTAATCCCGTTTAAAGT 59.677 38.462 0.00 0.00 36.26 2.66
725 726 6.322712 TGGATCCCATTTAATCCCGTTTAAAG 59.677 38.462 9.90 0.00 40.70 1.85
726 727 6.195700 TGGATCCCATTTAATCCCGTTTAAA 58.804 36.000 9.90 0.00 40.70 1.52
727 728 5.767670 TGGATCCCATTTAATCCCGTTTAA 58.232 37.500 9.90 0.00 40.70 1.52
728 729 5.103855 ACTGGATCCCATTTAATCCCGTTTA 60.104 40.000 9.90 0.00 40.70 2.01
729 730 4.215109 CTGGATCCCATTTAATCCCGTTT 58.785 43.478 9.90 0.00 40.70 3.60
730 731 3.204382 ACTGGATCCCATTTAATCCCGTT 59.796 43.478 9.90 0.00 40.70 4.44
731 732 2.783510 ACTGGATCCCATTTAATCCCGT 59.216 45.455 9.90 0.00 40.70 5.28
732 733 3.508845 ACTGGATCCCATTTAATCCCG 57.491 47.619 9.90 0.00 40.70 5.14
733 734 4.584743 GTCAACTGGATCCCATTTAATCCC 59.415 45.833 9.90 0.00 40.70 3.85
734 735 5.200483 TGTCAACTGGATCCCATTTAATCC 58.800 41.667 9.90 0.00 41.60 3.01
735 736 6.015940 GGATGTCAACTGGATCCCATTTAATC 60.016 42.308 9.90 4.71 30.82 1.75
736 737 5.835280 GGATGTCAACTGGATCCCATTTAAT 59.165 40.000 9.90 0.00 30.82 1.40
737 738 5.200483 GGATGTCAACTGGATCCCATTTAA 58.800 41.667 9.90 0.00 30.82 1.52
738 739 4.792068 GGATGTCAACTGGATCCCATTTA 58.208 43.478 9.90 0.00 30.82 1.40
739 740 3.635591 GGATGTCAACTGGATCCCATTT 58.364 45.455 9.90 0.00 30.82 2.32
740 741 3.303351 GGATGTCAACTGGATCCCATT 57.697 47.619 9.90 0.00 30.82 3.16
743 744 3.808984 GGGATGTCAACTGGATCCC 57.191 57.895 9.90 0.00 46.74 3.85
744 745 2.224402 GCTAGGGATGTCAACTGGATCC 60.224 54.545 4.20 4.20 35.78 3.36
745 746 2.224402 GGCTAGGGATGTCAACTGGATC 60.224 54.545 0.00 0.00 0.00 3.36
746 747 1.771255 GGCTAGGGATGTCAACTGGAT 59.229 52.381 0.00 0.00 0.00 3.41
747 748 1.204146 GGCTAGGGATGTCAACTGGA 58.796 55.000 0.00 0.00 0.00 3.86
748 749 0.181350 GGGCTAGGGATGTCAACTGG 59.819 60.000 0.00 0.00 0.00 4.00
749 750 0.181350 GGGGCTAGGGATGTCAACTG 59.819 60.000 0.00 0.00 0.00 3.16
750 751 0.044855 AGGGGCTAGGGATGTCAACT 59.955 55.000 0.00 0.00 0.00 3.16
751 752 1.416772 GTAGGGGCTAGGGATGTCAAC 59.583 57.143 0.00 0.00 0.00 3.18
752 753 1.294068 AGTAGGGGCTAGGGATGTCAA 59.706 52.381 0.00 0.00 0.00 3.18
753 754 0.941963 AGTAGGGGCTAGGGATGTCA 59.058 55.000 0.00 0.00 0.00 3.58
754 755 1.343069 CAGTAGGGGCTAGGGATGTC 58.657 60.000 0.00 0.00 0.00 3.06
755 756 0.104934 CCAGTAGGGGCTAGGGATGT 60.105 60.000 0.00 0.00 0.00 3.06
756 757 0.191064 TCCAGTAGGGGCTAGGGATG 59.809 60.000 0.00 0.00 37.22 3.51
757 758 0.191314 GTCCAGTAGGGGCTAGGGAT 59.809 60.000 0.00 0.00 38.65 3.85
758 759 1.226104 TGTCCAGTAGGGGCTAGGGA 61.226 60.000 0.00 0.00 43.75 4.20
759 760 0.104934 ATGTCCAGTAGGGGCTAGGG 60.105 60.000 0.00 0.00 43.75 3.53
760 761 2.696526 TATGTCCAGTAGGGGCTAGG 57.303 55.000 0.00 0.00 43.75 3.02
761 762 4.021016 GTCAATATGTCCAGTAGGGGCTAG 60.021 50.000 0.00 0.00 43.75 3.42
762 763 3.901844 GTCAATATGTCCAGTAGGGGCTA 59.098 47.826 0.00 0.00 43.75 3.93
763 764 2.706190 GTCAATATGTCCAGTAGGGGCT 59.294 50.000 0.00 0.00 43.75 5.19
764 765 2.706190 AGTCAATATGTCCAGTAGGGGC 59.294 50.000 0.00 0.00 43.63 5.80
765 766 3.967326 TCAGTCAATATGTCCAGTAGGGG 59.033 47.826 0.00 0.00 37.22 4.79
766 767 4.651503 AGTCAGTCAATATGTCCAGTAGGG 59.348 45.833 0.00 0.00 34.83 3.53
767 768 5.860941 AGTCAGTCAATATGTCCAGTAGG 57.139 43.478 0.00 0.00 0.00 3.18
768 769 5.521735 GCAAGTCAGTCAATATGTCCAGTAG 59.478 44.000 0.00 0.00 0.00 2.57
809 810 1.408422 GTTCTTTTCACACGGCATGC 58.592 50.000 9.90 9.90 0.00 4.06
860 861 2.747855 GCGGCCACAAGGAGAAGG 60.748 66.667 2.24 0.00 36.89 3.46
918 919 2.684374 GGGTAGAAGAGAAGAGGTCGAC 59.316 54.545 7.13 7.13 0.00 4.20
1055 1092 1.597854 CGCTTGCAGAAGGTCACCA 60.598 57.895 0.00 0.00 0.00 4.17
1125 1162 3.397613 GAGGCCGAGGCTTGCATCT 62.398 63.158 14.33 0.92 38.98 2.90
1176 1213 1.136305 GTATTCGGGCTGCAGTAGTCA 59.864 52.381 16.64 0.00 30.64 3.41
1188 1225 1.930567 CCACGTACCTTGTATTCGGG 58.069 55.000 0.00 0.00 0.00 5.14
1203 1240 1.471676 GGACAGATCAACCTAGCCACG 60.472 57.143 0.00 0.00 0.00 4.94
1204 1241 1.134371 GGGACAGATCAACCTAGCCAC 60.134 57.143 0.00 0.00 0.00 5.01
1205 1242 1.204146 GGGACAGATCAACCTAGCCA 58.796 55.000 0.00 0.00 0.00 4.75
1206 1243 0.105039 CGGGACAGATCAACCTAGCC 59.895 60.000 0.00 0.00 0.00 3.93
1229 1266 2.424601 GCTCTTGCATGCATTAAGGACA 59.575 45.455 23.37 2.30 39.41 4.02
1230 1267 2.686915 AGCTCTTGCATGCATTAAGGAC 59.313 45.455 23.37 11.39 42.74 3.85
1237 1274 0.034380 ACAGGAGCTCTTGCATGCAT 60.034 50.000 24.49 5.68 42.74 3.96
1246 3074 7.093112 GGGAAATATATATGTCACAGGAGCTCT 60.093 40.741 14.64 0.00 0.00 4.09
1247 3075 7.044798 GGGAAATATATATGTCACAGGAGCTC 58.955 42.308 13.79 4.71 0.00 4.09
1248 3076 6.732862 AGGGAAATATATATGTCACAGGAGCT 59.267 38.462 16.10 0.00 0.00 4.09
1249 3077 6.951971 AGGGAAATATATATGTCACAGGAGC 58.048 40.000 16.10 0.00 0.00 4.70
1341 3212 3.791586 GAGGCTGGAGCTGGGACC 61.792 72.222 0.00 0.00 41.70 4.46
1342 3213 3.791586 GGAGGCTGGAGCTGGGAC 61.792 72.222 0.00 0.00 41.70 4.46
1343 3214 4.337304 TGGAGGCTGGAGCTGGGA 62.337 66.667 0.00 0.00 41.70 4.37
1344 3215 3.795041 CTGGAGGCTGGAGCTGGG 61.795 72.222 0.00 0.00 41.70 4.45
1345 3216 3.795041 CCTGGAGGCTGGAGCTGG 61.795 72.222 0.00 0.00 41.70 4.85
1346 3217 3.795041 CCCTGGAGGCTGGAGCTG 61.795 72.222 0.00 0.00 41.70 4.24
1349 3220 1.925455 TTTCCCCTGGAGGCTGGAG 60.925 63.158 0.00 0.00 31.21 3.86
1355 3226 0.178964 TTTGCAGTTTCCCCTGGAGG 60.179 55.000 0.00 0.00 34.11 4.30
1356 3227 0.961753 GTTTGCAGTTTCCCCTGGAG 59.038 55.000 0.00 0.00 34.11 3.86
1357 3228 0.469144 GGTTTGCAGTTTCCCCTGGA 60.469 55.000 0.00 0.00 32.92 3.86
1359 3230 0.675633 CTGGTTTGCAGTTTCCCCTG 59.324 55.000 0.00 0.00 35.49 4.45
1360 3231 0.555769 TCTGGTTTGCAGTTTCCCCT 59.444 50.000 0.00 0.00 0.00 4.79
1364 3235 3.300009 CATCGTTCTGGTTTGCAGTTTC 58.700 45.455 0.00 0.00 0.00 2.78
1365 3236 2.034558 CCATCGTTCTGGTTTGCAGTTT 59.965 45.455 0.00 0.00 0.00 2.66
1368 3239 0.523072 CCCATCGTTCTGGTTTGCAG 59.477 55.000 0.00 0.00 34.23 4.41
1370 3241 0.893727 ACCCCATCGTTCTGGTTTGC 60.894 55.000 0.00 0.00 34.23 3.68
1381 3252 0.469494 TGATCATCACCACCCCATCG 59.531 55.000 0.00 0.00 0.00 3.84
1384 3255 1.491754 CTGATGATCATCACCACCCCA 59.508 52.381 30.27 11.09 42.42 4.96
1385 3256 1.202855 CCTGATGATCATCACCACCCC 60.203 57.143 30.27 7.02 42.42 4.95
1386 3257 1.492176 ACCTGATGATCATCACCACCC 59.508 52.381 30.27 7.73 42.42 4.61
1387 3258 2.569059 CACCTGATGATCATCACCACC 58.431 52.381 30.27 8.43 42.42 4.61
1388 3259 1.945394 GCACCTGATGATCATCACCAC 59.055 52.381 30.27 17.59 42.42 4.16
1396 3267 2.855209 AGCATAGGCACCTGATGATC 57.145 50.000 0.67 0.00 44.61 2.92
1407 3278 6.581542 CGTATGTACAGTAAAGTAGCATAGGC 59.418 42.308 0.33 0.00 41.61 3.93
1432 3372 1.804151 TGCACAAATCGCTCCTTGTAC 59.196 47.619 0.00 0.00 34.04 2.90
1438 3378 1.202076 GCTAAGTGCACAAATCGCTCC 60.202 52.381 21.04 0.00 42.31 4.70
1457 3397 6.128929 GGAACGACCAAATTAAAGTTCATTGC 60.129 38.462 8.14 0.00 39.53 3.56
1465 3405 3.058501 ACGCAGGAACGACCAAATTAAAG 60.059 43.478 0.00 0.00 42.04 1.85
1466 3406 2.879646 ACGCAGGAACGACCAAATTAAA 59.120 40.909 0.00 0.00 42.04 1.52
1467 3407 2.481185 GACGCAGGAACGACCAAATTAA 59.519 45.455 0.00 0.00 42.04 1.40
1468 3408 2.070783 GACGCAGGAACGACCAAATTA 58.929 47.619 0.00 0.00 42.04 1.40
1469 3409 0.872388 GACGCAGGAACGACCAAATT 59.128 50.000 0.00 0.00 42.04 1.82
1470 3410 0.953960 GGACGCAGGAACGACCAAAT 60.954 55.000 0.00 0.00 45.33 2.32
1516 3462 3.484886 GCTCAATCTCATGCGTCAACTTC 60.485 47.826 0.00 0.00 0.00 3.01
1518 3464 2.005451 GCTCAATCTCATGCGTCAACT 58.995 47.619 0.00 0.00 0.00 3.16
1537 3483 3.859414 AGGCTGGCCTCGAGATGC 61.859 66.667 15.71 9.76 44.43 3.91
1564 3510 1.281925 ATGGCAGATCTTCCCCGGTT 61.282 55.000 9.06 0.00 0.00 4.44
1622 3580 1.228124 CTTTTCCCAGTGCCGACCA 60.228 57.895 0.00 0.00 0.00 4.02
1642 3600 4.564821 CCCAATCCTACCTTTCTTTGACGA 60.565 45.833 0.00 0.00 0.00 4.20
1662 3624 0.878416 GCAAAATGTACTGCGACCCA 59.122 50.000 0.00 0.00 0.00 4.51
1665 3627 2.679355 TGTGCAAAATGTACTGCGAC 57.321 45.000 0.00 0.00 41.63 5.19
1669 3631 4.919168 CAGTTGGATGTGCAAAATGTACTG 59.081 41.667 0.00 0.00 33.97 2.74
1702 3672 0.667453 TTGCATGCGAGCAGTGAAAA 59.333 45.000 14.09 0.00 46.54 2.29
1704 3674 0.239082 CTTTGCATGCGAGCAGTGAA 59.761 50.000 14.09 0.00 46.54 3.18
1728 3698 3.308046 GGAGGAAGAGAGGCATGAACTTT 60.308 47.826 0.00 0.00 0.00 2.66
1729 3699 2.238395 GGAGGAAGAGAGGCATGAACTT 59.762 50.000 0.00 0.00 0.00 2.66
1730 3700 1.836802 GGAGGAAGAGAGGCATGAACT 59.163 52.381 0.00 0.00 0.00 3.01
1736 3706 0.979665 CACAAGGAGGAAGAGAGGCA 59.020 55.000 0.00 0.00 0.00 4.75
1739 3709 3.323403 AGTCAACACAAGGAGGAAGAGAG 59.677 47.826 0.00 0.00 0.00 3.20
1743 3713 3.199880 ACAGTCAACACAAGGAGGAAG 57.800 47.619 0.00 0.00 0.00 3.46
1759 3729 2.651455 CTGCATCCATGGATCAACAGT 58.349 47.619 24.93 0.00 31.62 3.55
1760 3730 1.954382 CCTGCATCCATGGATCAACAG 59.046 52.381 27.51 27.51 31.62 3.16
1761 3731 1.565288 TCCTGCATCCATGGATCAACA 59.435 47.619 24.93 20.06 31.62 3.33
1762 3732 2.353357 TCCTGCATCCATGGATCAAC 57.647 50.000 24.93 16.70 31.62 3.18
1763 3733 2.444010 TCATCCTGCATCCATGGATCAA 59.556 45.455 24.93 14.26 38.41 2.57
1764 3734 2.039879 CTCATCCTGCATCCATGGATCA 59.960 50.000 24.93 21.55 38.41 2.92
1765 3735 2.712709 CTCATCCTGCATCCATGGATC 58.287 52.381 24.93 18.42 38.41 3.36
1766 3736 1.271982 GCTCATCCTGCATCCATGGAT 60.272 52.381 22.15 22.15 40.85 3.41
1767 3737 0.109913 GCTCATCCTGCATCCATGGA 59.890 55.000 18.88 18.88 0.00 3.41
1768 3738 0.110678 AGCTCATCCTGCATCCATGG 59.889 55.000 4.97 4.97 0.00 3.66
1769 3739 2.038689 AGTAGCTCATCCTGCATCCATG 59.961 50.000 0.00 0.00 0.00 3.66
1794 3764 2.039405 CAGAAGCTCACCCTGCTGC 61.039 63.158 0.00 0.00 41.03 5.25
1795 3765 0.035881 TTCAGAAGCTCACCCTGCTG 59.964 55.000 0.00 0.00 41.03 4.41
1796 3766 0.036022 GTTCAGAAGCTCACCCTGCT 59.964 55.000 0.00 0.00 43.32 4.24
1797 3767 0.957888 GGTTCAGAAGCTCACCCTGC 60.958 60.000 5.02 0.00 0.00 4.85
1798 3768 0.397941 TGGTTCAGAAGCTCACCCTG 59.602 55.000 13.45 0.00 0.00 4.45
1799 3769 0.689623 CTGGTTCAGAAGCTCACCCT 59.310 55.000 13.45 0.00 32.44 4.34
1800 3770 0.957888 GCTGGTTCAGAAGCTCACCC 60.958 60.000 13.45 0.00 36.47 4.61
1801 3771 0.250467 TGCTGGTTCAGAAGCTCACC 60.250 55.000 13.45 0.00 40.21 4.02
1802 3772 1.155042 CTGCTGGTTCAGAAGCTCAC 58.845 55.000 13.45 3.86 40.21 3.51
1803 3773 3.620061 CTGCTGGTTCAGAAGCTCA 57.380 52.632 13.45 9.97 40.21 4.26
1807 3777 2.552802 CCAGCTGCTGGTTCAGAAG 58.447 57.895 35.03 11.66 45.82 2.85
1808 3778 4.806936 CCAGCTGCTGGTTCAGAA 57.193 55.556 35.03 0.00 45.82 3.02
1818 3788 2.056481 GATGTGATTCGCCCAGCTGC 62.056 60.000 8.66 0.00 0.00 5.25
1832 3802 0.438445 CACACGTACCTTGCGATGTG 59.562 55.000 0.00 0.00 36.21 3.21
1850 3820 7.953005 TTAATTATTTGGAATCTGAGGCACA 57.047 32.000 0.00 0.00 0.00 4.57
1853 3823 9.631452 GCTAATTAATTATTTGGAATCTGAGGC 57.369 33.333 8.34 0.46 0.00 4.70
1886 3925 0.179009 AGCATCATTGGGTCGGATGG 60.179 55.000 0.00 0.00 39.00 3.51
1940 3979 1.078848 GATCCTGCCTGACTGCGTT 60.079 57.895 0.00 0.00 0.00 4.84
1941 3980 2.581354 GATCCTGCCTGACTGCGT 59.419 61.111 0.00 0.00 0.00 5.24
1942 3981 2.584418 CGATCCTGCCTGACTGCG 60.584 66.667 0.00 0.00 0.00 5.18
1943 3982 1.812922 CACGATCCTGCCTGACTGC 60.813 63.158 0.00 0.00 0.00 4.40
1944 3983 1.812922 GCACGATCCTGCCTGACTG 60.813 63.158 5.47 0.00 0.00 3.51
1945 3984 1.986757 AGCACGATCCTGCCTGACT 60.987 57.895 12.37 0.00 37.96 3.41
1946 3985 1.812922 CAGCACGATCCTGCCTGAC 60.813 63.158 12.37 0.00 37.96 3.51
1947 3986 2.580815 CAGCACGATCCTGCCTGA 59.419 61.111 12.37 0.00 37.96 3.86
1962 4001 3.473647 TCATCCCCTCTGCGGCAG 61.474 66.667 23.72 23.72 0.00 4.85
1963 4002 3.785859 GTCATCCCCTCTGCGGCA 61.786 66.667 1.29 1.29 0.00 5.69
1964 4003 4.899239 CGTCATCCCCTCTGCGGC 62.899 72.222 0.00 0.00 0.00 6.53
1965 4004 3.147595 TCGTCATCCCCTCTGCGG 61.148 66.667 0.00 0.00 0.00 5.69
1966 4005 2.105128 GTCGTCATCCCCTCTGCG 59.895 66.667 0.00 0.00 0.00 5.18
1967 4006 0.036388 TTTGTCGTCATCCCCTCTGC 60.036 55.000 0.00 0.00 0.00 4.26
1968 4007 2.076863 GTTTTGTCGTCATCCCCTCTG 58.923 52.381 0.00 0.00 0.00 3.35
1969 4008 1.697432 TGTTTTGTCGTCATCCCCTCT 59.303 47.619 0.00 0.00 0.00 3.69
1970 4009 2.076863 CTGTTTTGTCGTCATCCCCTC 58.923 52.381 0.00 0.00 0.00 4.30
1971 4010 1.697432 TCTGTTTTGTCGTCATCCCCT 59.303 47.619 0.00 0.00 0.00 4.79
1972 4011 2.178912 TCTGTTTTGTCGTCATCCCC 57.821 50.000 0.00 0.00 0.00 4.81
1973 4012 2.159517 GCATCTGTTTTGTCGTCATCCC 60.160 50.000 0.00 0.00 0.00 3.85
1974 4013 2.744202 AGCATCTGTTTTGTCGTCATCC 59.256 45.455 0.00 0.00 0.00 3.51
1975 4014 5.530519 TTAGCATCTGTTTTGTCGTCATC 57.469 39.130 0.00 0.00 0.00 2.92
1976 4015 5.163723 CCATTAGCATCTGTTTTGTCGTCAT 60.164 40.000 0.00 0.00 0.00 3.06
1977 4016 4.154015 CCATTAGCATCTGTTTTGTCGTCA 59.846 41.667 0.00 0.00 0.00 4.35
1978 4017 4.651994 CCATTAGCATCTGTTTTGTCGTC 58.348 43.478 0.00 0.00 0.00 4.20
1979 4018 3.119849 GCCATTAGCATCTGTTTTGTCGT 60.120 43.478 0.00 0.00 42.97 4.34
1980 4019 3.429085 GCCATTAGCATCTGTTTTGTCG 58.571 45.455 0.00 0.00 42.97 4.35
1981 4020 3.445096 AGGCCATTAGCATCTGTTTTGTC 59.555 43.478 5.01 0.00 46.50 3.18
1982 4021 3.434309 AGGCCATTAGCATCTGTTTTGT 58.566 40.909 5.01 0.00 46.50 2.83
1991 4030 2.281070 CGCCGAGGCCATTAGCAT 60.281 61.111 5.01 0.00 46.50 3.79
1992 4031 4.545706 CCGCCGAGGCCATTAGCA 62.546 66.667 5.01 0.00 46.50 3.49
2009 4048 4.821589 CTCGGGCTCCAGGAACGC 62.822 72.222 0.00 0.00 0.00 4.84
2010 4049 4.148825 CCTCGGGCTCCAGGAACG 62.149 72.222 0.00 0.00 30.32 3.95
2011 4050 4.475135 GCCTCGGGCTCCAGGAAC 62.475 72.222 0.00 0.00 46.69 3.62
2022 4061 3.884581 TTTGACGTCGACGCCTCGG 62.885 63.158 35.92 11.11 44.43 4.63
2023 4062 2.426183 CTTTGACGTCGACGCCTCG 61.426 63.158 35.92 17.60 44.43 4.63
2024 4063 2.717809 GCTTTGACGTCGACGCCTC 61.718 63.158 35.92 26.52 44.43 4.70
2025 4064 2.733593 GCTTTGACGTCGACGCCT 60.734 61.111 35.92 19.53 44.43 5.52
2026 4065 3.000080 CTGCTTTGACGTCGACGCC 62.000 63.158 35.92 27.37 44.43 5.68
2027 4066 2.465920 CTGCTTTGACGTCGACGC 59.534 61.111 35.92 27.26 44.43 5.19
2028 4067 2.465920 GCTGCTTTGACGTCGACG 59.534 61.111 34.58 34.58 46.33 5.12
2029 4068 2.853914 GGCTGCTTTGACGTCGAC 59.146 61.111 11.62 5.18 0.00 4.20
2030 4069 2.733218 CGGCTGCTTTGACGTCGA 60.733 61.111 11.62 6.16 33.11 4.20
2031 4070 4.430423 GCGGCTGCTTTGACGTCG 62.430 66.667 11.21 0.00 41.16 5.12
2032 4071 4.090057 GGCGGCTGCTTTGACGTC 62.090 66.667 18.85 9.11 41.16 4.34
2053 4092 3.718210 CTCGGGGAGCTACGGCAAC 62.718 68.421 5.29 0.00 41.70 4.17
2054 4093 3.458163 CTCGGGGAGCTACGGCAA 61.458 66.667 5.29 0.00 41.70 4.52
2055 4094 4.435970 TCTCGGGGAGCTACGGCA 62.436 66.667 5.29 0.00 41.70 5.69
2056 4095 3.902086 GTCTCGGGGAGCTACGGC 61.902 72.222 5.29 0.00 39.06 5.68
2057 4096 3.584052 CGTCTCGGGGAGCTACGG 61.584 72.222 5.29 0.00 30.01 4.02
2058 4097 2.823147 ACGTCTCGGGGAGCTACG 60.823 66.667 1.56 1.56 36.45 3.51
2059 4098 1.716826 CTCACGTCTCGGGGAGCTAC 61.717 65.000 0.00 0.00 0.00 3.58
2060 4099 1.451567 CTCACGTCTCGGGGAGCTA 60.452 63.158 0.00 0.00 0.00 3.32
2061 4100 2.752238 CTCACGTCTCGGGGAGCT 60.752 66.667 0.00 0.00 0.00 4.09
2062 4101 4.500116 GCTCACGTCTCGGGGAGC 62.500 72.222 16.92 16.92 45.24 4.70
2063 4102 2.752238 AGCTCACGTCTCGGGGAG 60.752 66.667 0.00 8.09 36.19 4.30
2064 4103 3.062466 CAGCTCACGTCTCGGGGA 61.062 66.667 0.00 0.00 0.00 4.81
2065 4104 4.803426 GCAGCTCACGTCTCGGGG 62.803 72.222 0.00 0.00 0.00 5.73
2066 4105 3.288308 AAGCAGCTCACGTCTCGGG 62.288 63.158 0.00 0.00 0.00 5.14
2067 4106 1.803519 GAAGCAGCTCACGTCTCGG 60.804 63.158 0.00 0.00 0.00 4.63
2068 4107 2.148982 CGAAGCAGCTCACGTCTCG 61.149 63.158 12.10 5.80 0.00 4.04
2069 4108 3.760673 CGAAGCAGCTCACGTCTC 58.239 61.111 12.10 0.00 0.00 3.36
2082 4121 1.001406 GATACATCCTCCAGGGCGAAG 59.999 57.143 0.00 0.00 35.41 3.79
2083 4122 1.048601 GATACATCCTCCAGGGCGAA 58.951 55.000 0.00 0.00 35.41 4.70
2084 4123 0.105709 TGATACATCCTCCAGGGCGA 60.106 55.000 0.00 0.00 35.41 5.54
2085 4124 0.979665 ATGATACATCCTCCAGGGCG 59.020 55.000 0.00 0.00 35.41 6.13
2086 4125 1.612726 GCATGATACATCCTCCAGGGC 60.613 57.143 0.00 0.00 35.41 5.19
2087 4126 1.004044 GGCATGATACATCCTCCAGGG 59.996 57.143 0.00 0.00 35.41 4.45
2088 4127 1.701292 TGGCATGATACATCCTCCAGG 59.299 52.381 0.00 0.00 0.00 4.45
2089 4128 3.715638 ATGGCATGATACATCCTCCAG 57.284 47.619 0.00 0.00 0.00 3.86
2090 4129 3.909364 TGTATGGCATGATACATCCTCCA 59.091 43.478 10.98 0.00 34.53 3.86
2091 4130 4.558226 TGTATGGCATGATACATCCTCC 57.442 45.455 10.98 0.00 34.53 4.30
2092 4131 4.394300 GCTTGTATGGCATGATACATCCTC 59.606 45.833 10.98 0.00 38.36 3.71
2093 4132 4.042560 AGCTTGTATGGCATGATACATCCT 59.957 41.667 10.98 3.52 38.36 3.24
2094 4133 4.330250 AGCTTGTATGGCATGATACATCC 58.670 43.478 10.98 1.30 38.36 3.51
2095 4134 5.243981 AGAGCTTGTATGGCATGATACATC 58.756 41.667 10.98 1.88 38.36 3.06
2096 4135 5.238624 AGAGCTTGTATGGCATGATACAT 57.761 39.130 10.98 5.84 38.36 2.29
2097 4136 4.694760 AGAGCTTGTATGGCATGATACA 57.305 40.909 10.98 3.60 37.10 2.29
2098 4137 4.623167 CGTAGAGCTTGTATGGCATGATAC 59.377 45.833 10.98 0.50 0.00 2.24
2099 4138 4.522789 TCGTAGAGCTTGTATGGCATGATA 59.477 41.667 10.98 0.00 0.00 2.15
2100 4139 3.321968 TCGTAGAGCTTGTATGGCATGAT 59.678 43.478 10.98 0.00 0.00 2.45
2101 4140 2.693074 TCGTAGAGCTTGTATGGCATGA 59.307 45.455 10.98 0.00 0.00 3.07
2102 4141 3.097877 TCGTAGAGCTTGTATGGCATG 57.902 47.619 10.98 0.00 0.00 4.06
2103 4142 3.657634 CATCGTAGAGCTTGTATGGCAT 58.342 45.455 4.88 4.88 43.63 4.40
2104 4143 2.803133 GCATCGTAGAGCTTGTATGGCA 60.803 50.000 0.00 0.00 43.63 4.92
2105 4144 1.795286 GCATCGTAGAGCTTGTATGGC 59.205 52.381 0.00 0.00 43.63 4.40
2106 4145 2.054363 CGCATCGTAGAGCTTGTATGG 58.946 52.381 0.00 0.00 43.63 2.74
2107 4146 3.000082 TCGCATCGTAGAGCTTGTATG 58.000 47.619 0.00 0.00 43.63 2.39
2108 4147 3.710326 TTCGCATCGTAGAGCTTGTAT 57.290 42.857 0.00 0.00 43.63 2.29
2109 4148 3.710326 ATTCGCATCGTAGAGCTTGTA 57.290 42.857 0.00 0.00 43.63 2.41
2110 4149 2.586258 ATTCGCATCGTAGAGCTTGT 57.414 45.000 0.00 0.00 43.63 3.16
2111 4150 4.267690 TGTTTATTCGCATCGTAGAGCTTG 59.732 41.667 0.00 0.00 43.63 4.01
2112 4151 4.267928 GTGTTTATTCGCATCGTAGAGCTT 59.732 41.667 0.00 0.00 43.63 3.74
2113 4152 3.797256 GTGTTTATTCGCATCGTAGAGCT 59.203 43.478 0.00 0.00 43.63 4.09
2114 4153 3.360765 CGTGTTTATTCGCATCGTAGAGC 60.361 47.826 0.00 0.00 43.63 4.09
2115 4154 4.341867 CGTGTTTATTCGCATCGTAGAG 57.658 45.455 0.00 0.00 43.63 2.43
2125 4164 2.145053 GCAGTGAGCGTGTTTATTCG 57.855 50.000 0.00 0.00 0.00 3.34
2133 4172 6.212878 AAGTAGCTACTAGCAGTGAGCGTG 62.213 50.000 26.29 0.00 45.56 5.34
2134 4173 4.181529 AAGTAGCTACTAGCAGTGAGCGT 61.182 47.826 26.29 3.67 45.56 5.07
2135 4174 2.356382 AAGTAGCTACTAGCAGTGAGCG 59.644 50.000 26.29 0.00 45.56 5.03
2136 4175 3.378742 TGAAGTAGCTACTAGCAGTGAGC 59.621 47.826 26.29 8.31 45.56 4.26
2137 4176 5.766150 ATGAAGTAGCTACTAGCAGTGAG 57.234 43.478 26.29 0.00 45.56 3.51
2138 4177 6.120220 TGTATGAAGTAGCTACTAGCAGTGA 58.880 40.000 26.29 13.46 45.56 3.41
2139 4178 6.378710 TGTATGAAGTAGCTACTAGCAGTG 57.621 41.667 26.29 0.00 45.56 3.66
2140 4179 6.207810 GGATGTATGAAGTAGCTACTAGCAGT 59.792 42.308 26.29 10.79 45.56 4.40
2141 4180 6.616947 GGATGTATGAAGTAGCTACTAGCAG 58.383 44.000 26.29 0.00 45.56 4.24
2142 4181 5.181433 CGGATGTATGAAGTAGCTACTAGCA 59.819 44.000 26.29 24.70 45.56 3.49
2143 4182 5.181622 ACGGATGTATGAAGTAGCTACTAGC 59.818 44.000 26.29 20.36 42.84 3.42
2144 4183 6.804770 ACGGATGTATGAAGTAGCTACTAG 57.195 41.667 26.29 10.02 34.99 2.57
2145 4184 8.319881 AGATACGGATGTATGAAGTAGCTACTA 58.680 37.037 26.29 12.72 41.37 1.82
2146 4185 7.169591 AGATACGGATGTATGAAGTAGCTACT 58.830 38.462 20.95 20.95 41.37 2.57
2147 4186 7.380431 AGATACGGATGTATGAAGTAGCTAC 57.620 40.000 16.43 16.43 41.37 3.58
2148 4187 8.537858 TCTAGATACGGATGTATGAAGTAGCTA 58.462 37.037 0.00 0.00 41.37 3.32
2149 4188 7.334921 GTCTAGATACGGATGTATGAAGTAGCT 59.665 40.741 0.00 0.00 41.37 3.32
2150 4189 7.119407 TGTCTAGATACGGATGTATGAAGTAGC 59.881 40.741 0.00 0.00 41.37 3.58
2151 4190 8.549338 TGTCTAGATACGGATGTATGAAGTAG 57.451 38.462 0.00 0.00 41.37 2.57
2152 4191 8.913487 TTGTCTAGATACGGATGTATGAAGTA 57.087 34.615 0.00 0.00 41.37 2.24
2153 4192 7.818997 TTGTCTAGATACGGATGTATGAAGT 57.181 36.000 0.00 0.00 41.37 3.01
2154 4193 9.347934 GATTTGTCTAGATACGGATGTATGAAG 57.652 37.037 0.00 0.00 41.37 3.02
2155 4194 9.078990 AGATTTGTCTAGATACGGATGTATGAA 57.921 33.333 0.00 0.00 41.37 2.57
2156 4195 8.637196 AGATTTGTCTAGATACGGATGTATGA 57.363 34.615 0.00 0.00 41.37 2.15
2159 4198 9.788889 TCTTAGATTTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 34.45 2.29
2160 4199 8.569641 GTCTTAGATTTGTCTAGATACGGATGT 58.430 37.037 0.00 0.00 0.00 3.06
2161 4200 8.568794 TGTCTTAGATTTGTCTAGATACGGATG 58.431 37.037 0.00 0.00 0.00 3.51
2162 4201 8.693120 TGTCTTAGATTTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 0.00 4.18
2163 4202 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
2164 4203 9.582431 TTTTGTCTTAGATTTGTCTAGATACGG 57.418 33.333 0.00 0.00 0.00 4.02
2172 4211 9.546428 CCCAAAATTTTTGTCTTAGATTTGTCT 57.454 29.630 18.05 0.00 0.00 3.41
2173 4212 9.541143 TCCCAAAATTTTTGTCTTAGATTTGTC 57.459 29.630 18.05 0.00 0.00 3.18
2174 4213 9.325198 GTCCCAAAATTTTTGTCTTAGATTTGT 57.675 29.630 18.05 0.00 0.00 2.83
2175 4214 8.487176 CGTCCCAAAATTTTTGTCTTAGATTTG 58.513 33.333 18.05 2.04 0.00 2.32
2176 4215 7.655732 CCGTCCCAAAATTTTTGTCTTAGATTT 59.344 33.333 18.05 0.00 0.00 2.17
2177 4216 7.014808 TCCGTCCCAAAATTTTTGTCTTAGATT 59.985 33.333 18.05 0.00 0.00 2.40
2178 4217 6.492087 TCCGTCCCAAAATTTTTGTCTTAGAT 59.508 34.615 18.05 0.00 0.00 1.98
2179 4218 5.828859 TCCGTCCCAAAATTTTTGTCTTAGA 59.171 36.000 18.05 8.44 0.00 2.10
2180 4219 6.079424 TCCGTCCCAAAATTTTTGTCTTAG 57.921 37.500 18.05 5.02 0.00 2.18
2181 4220 5.010213 CCTCCGTCCCAAAATTTTTGTCTTA 59.990 40.000 18.05 1.26 0.00 2.10
2182 4221 4.202212 CCTCCGTCCCAAAATTTTTGTCTT 60.202 41.667 18.05 0.00 0.00 3.01
2183 4222 3.320826 CCTCCGTCCCAAAATTTTTGTCT 59.679 43.478 18.05 0.00 0.00 3.41
2184 4223 3.554129 CCCTCCGTCCCAAAATTTTTGTC 60.554 47.826 18.05 9.04 0.00 3.18
2185 4224 2.367241 CCCTCCGTCCCAAAATTTTTGT 59.633 45.455 18.05 0.00 0.00 2.83
2186 4225 2.367241 ACCCTCCGTCCCAAAATTTTTG 59.633 45.455 13.76 13.76 0.00 2.44
2187 4226 2.684943 ACCCTCCGTCCCAAAATTTTT 58.315 42.857 0.00 0.00 0.00 1.94
2188 4227 2.391926 ACCCTCCGTCCCAAAATTTT 57.608 45.000 0.00 0.00 0.00 1.82
2189 4228 2.108601 TGTACCCTCCGTCCCAAAATTT 59.891 45.455 0.00 0.00 0.00 1.82
2190 4229 1.706305 TGTACCCTCCGTCCCAAAATT 59.294 47.619 0.00 0.00 0.00 1.82
2191 4230 1.364269 TGTACCCTCCGTCCCAAAAT 58.636 50.000 0.00 0.00 0.00 1.82
2192 4231 1.279846 GATGTACCCTCCGTCCCAAAA 59.720 52.381 0.00 0.00 0.00 2.44
2193 4232 0.906775 GATGTACCCTCCGTCCCAAA 59.093 55.000 0.00 0.00 0.00 3.28
2194 4233 0.979187 GGATGTACCCTCCGTCCCAA 60.979 60.000 0.00 0.00 32.76 4.12
2195 4234 1.382146 GGATGTACCCTCCGTCCCA 60.382 63.158 0.00 0.00 32.76 4.37
2196 4235 3.547247 GGATGTACCCTCCGTCCC 58.453 66.667 0.00 0.00 32.76 4.46
2201 4240 4.009002 GTCTAGATACGGATGTACCCTCC 58.991 52.174 0.00 2.20 32.26 4.30
2202 4241 4.649692 TGTCTAGATACGGATGTACCCTC 58.350 47.826 0.00 0.00 32.26 4.30
2203 4242 4.719026 TGTCTAGATACGGATGTACCCT 57.281 45.455 0.00 0.00 32.26 4.34
2204 4243 5.779529 TTTGTCTAGATACGGATGTACCC 57.220 43.478 0.00 0.00 32.26 3.69
2205 4244 7.216973 AGATTTGTCTAGATACGGATGTACC 57.783 40.000 0.00 0.00 32.26 3.34
2206 4245 9.828852 CTTAGATTTGTCTAGATACGGATGTAC 57.171 37.037 0.00 0.00 32.26 2.90
2207 4246 9.788889 TCTTAGATTTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 34.45 2.29
2208 4247 8.693120 TCTTAGATTTGTCTAGATACGGATGT 57.307 34.615 0.00 0.00 0.00 3.06
2228 4267 9.336171 CCCTCCTTCTCAAAATTCTTATCTTAG 57.664 37.037 0.00 0.00 0.00 2.18
2229 4268 9.057911 TCCCTCCTTCTCAAAATTCTTATCTTA 57.942 33.333 0.00 0.00 0.00 2.10
2230 4269 7.933223 TCCCTCCTTCTCAAAATTCTTATCTT 58.067 34.615 0.00 0.00 0.00 2.40
2231 4270 7.183657 ACTCCCTCCTTCTCAAAATTCTTATCT 59.816 37.037 0.00 0.00 0.00 1.98
2232 4271 7.342581 ACTCCCTCCTTCTCAAAATTCTTATC 58.657 38.462 0.00 0.00 0.00 1.75
2233 4272 7.277405 ACTCCCTCCTTCTCAAAATTCTTAT 57.723 36.000 0.00 0.00 0.00 1.73
2234 4273 6.704056 ACTCCCTCCTTCTCAAAATTCTTA 57.296 37.500 0.00 0.00 0.00 2.10
2235 4274 5.590976 ACTCCCTCCTTCTCAAAATTCTT 57.409 39.130 0.00 0.00 0.00 2.52
2236 4275 5.788014 AGTACTCCCTCCTTCTCAAAATTCT 59.212 40.000 0.00 0.00 0.00 2.40
2237 4276 6.056090 AGTACTCCCTCCTTCTCAAAATTC 57.944 41.667 0.00 0.00 0.00 2.17
2238 4277 6.352308 GCTAGTACTCCCTCCTTCTCAAAATT 60.352 42.308 0.00 0.00 0.00 1.82
2239 4278 5.129650 GCTAGTACTCCCTCCTTCTCAAAAT 59.870 44.000 0.00 0.00 0.00 1.82
2240 4279 4.466726 GCTAGTACTCCCTCCTTCTCAAAA 59.533 45.833 0.00 0.00 0.00 2.44
2241 4280 4.024670 GCTAGTACTCCCTCCTTCTCAAA 58.975 47.826 0.00 0.00 0.00 2.69
2242 4281 3.269906 AGCTAGTACTCCCTCCTTCTCAA 59.730 47.826 0.00 0.00 0.00 3.02
2243 4282 2.853707 AGCTAGTACTCCCTCCTTCTCA 59.146 50.000 0.00 0.00 0.00 3.27
2244 4283 3.588210 AGCTAGTACTCCCTCCTTCTC 57.412 52.381 0.00 0.00 0.00 2.87
2245 4284 4.049318 ACTAGCTAGTACTCCCTCCTTCT 58.951 47.826 24.97 0.00 34.13 2.85
2246 4285 4.442401 ACTAGCTAGTACTCCCTCCTTC 57.558 50.000 24.97 0.00 34.13 3.46
2257 4296 7.058525 TGGTTGAGCAATAGTACTAGCTAGTA 58.941 38.462 26.36 26.36 37.48 1.82
2258 4297 5.892119 TGGTTGAGCAATAGTACTAGCTAGT 59.108 40.000 28.50 28.50 37.48 2.57
2259 4298 6.392625 TGGTTGAGCAATAGTACTAGCTAG 57.607 41.667 19.44 19.44 37.48 3.42
2260 4299 6.978674 ATGGTTGAGCAATAGTACTAGCTA 57.021 37.500 14.70 0.00 37.48 3.32
2261 4300 5.878406 ATGGTTGAGCAATAGTACTAGCT 57.122 39.130 14.64 14.64 40.60 3.32
2262 4301 5.817816 ACAATGGTTGAGCAATAGTACTAGC 59.182 40.000 8.85 7.34 0.00 3.42
2263 4302 7.849804 AACAATGGTTGAGCAATAGTACTAG 57.150 36.000 8.85 0.00 35.46 2.57
2264 4303 8.755028 TCTAACAATGGTTGAGCAATAGTACTA 58.245 33.333 4.77 4.77 37.88 1.82
2265 4304 7.549488 GTCTAACAATGGTTGAGCAATAGTACT 59.451 37.037 0.00 0.00 37.88 2.73
2266 4305 7.549488 AGTCTAACAATGGTTGAGCAATAGTAC 59.451 37.037 0.00 0.00 37.88 2.73
2267 4306 7.620880 AGTCTAACAATGGTTGAGCAATAGTA 58.379 34.615 0.00 0.00 37.88 1.82
2268 4307 6.476378 AGTCTAACAATGGTTGAGCAATAGT 58.524 36.000 0.00 0.00 37.88 2.12
2269 4308 6.992063 AGTCTAACAATGGTTGAGCAATAG 57.008 37.500 0.00 0.00 37.88 1.73
2270 4309 8.046708 ACATAGTCTAACAATGGTTGAGCAATA 58.953 33.333 0.00 0.00 37.88 1.90
2271 4310 6.886459 ACATAGTCTAACAATGGTTGAGCAAT 59.114 34.615 0.00 0.00 37.88 3.56
2272 4311 6.237901 ACATAGTCTAACAATGGTTGAGCAA 58.762 36.000 0.00 0.00 37.88 3.91
2273 4312 5.804639 ACATAGTCTAACAATGGTTGAGCA 58.195 37.500 0.00 0.00 37.88 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.