Multiple sequence alignment - TraesCS1B01G408100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G408100 chr1B 100.000 3627 0 0 1 3627 635512378 635508752 0.000000e+00 6698
1 TraesCS1B01G408100 chr1B 98.948 3326 35 0 1 3326 635548079 635544754 0.000000e+00 5949
2 TraesCS1B01G408100 chr1B 84.967 1530 202 16 1044 2559 26857175 26855660 0.000000e+00 1526
3 TraesCS1B01G408100 chr1B 99.349 307 2 0 3321 3627 635539791 635539485 1.140000e-154 556
4 TraesCS1B01G408100 chr1B 97.078 308 9 0 2794 3101 588322412 588322719 1.490000e-143 520
5 TraesCS1B01G408100 chr1B 78.632 468 72 10 2120 2579 26617643 26618090 5.930000e-73 285
6 TraesCS1B01G408100 chr3B 84.433 1561 207 16 1015 2564 556367896 556369431 0.000000e+00 1504
7 TraesCS1B01G408100 chr3B 96.795 312 8 2 2788 3099 8462718 8463027 1.490000e-143 520
8 TraesCS1B01G408100 chr3D 84.268 1551 200 19 1016 2555 426000198 425998681 0.000000e+00 1472
9 TraesCS1B01G408100 chr4B 97.386 306 8 0 2795 3100 40215227 40215532 4.150000e-144 521
10 TraesCS1B01G408100 chr7A 97.078 308 9 0 2793 3100 4784761 4785068 1.490000e-143 520
11 TraesCS1B01G408100 chr7A 97.087 309 7 2 2793 3100 711583884 711584191 1.490000e-143 520
12 TraesCS1B01G408100 chr6B 97.377 305 8 0 2796 3100 551769915 551770219 1.490000e-143 520
13 TraesCS1B01G408100 chr2B 96.774 310 10 0 2791 3100 77779600 77779291 5.370000e-143 518
14 TraesCS1B01G408100 chr7B 96.166 313 10 2 2788 3100 717328901 717329211 8.980000e-141 510
15 TraesCS1B01G408100 chr1D 80.749 561 90 12 2012 2558 18210216 18210772 4.330000e-114 422


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G408100 chr1B 635508752 635512378 3626 True 6698 6698 100.000 1 3627 1 chr1B.!!$R2 3626
1 TraesCS1B01G408100 chr1B 635544754 635548079 3325 True 5949 5949 98.948 1 3326 1 chr1B.!!$R4 3325
2 TraesCS1B01G408100 chr1B 26855660 26857175 1515 True 1526 1526 84.967 1044 2559 1 chr1B.!!$R1 1515
3 TraesCS1B01G408100 chr3B 556367896 556369431 1535 False 1504 1504 84.433 1015 2564 1 chr3B.!!$F2 1549
4 TraesCS1B01G408100 chr3D 425998681 426000198 1517 True 1472 1472 84.268 1016 2555 1 chr3D.!!$R1 1539
5 TraesCS1B01G408100 chr1D 18210216 18210772 556 False 422 422 80.749 2012 2558 1 chr1D.!!$F1 546

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
801 802 1.001181 CCACCCAAACAAGAATGCCAG 59.999 52.381 0.00 0.0 0.0 4.85 F
809 810 1.030457 CAAGAATGCCAGATCAGCCC 58.970 55.000 5.41 0.0 0.0 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2107 2120 0.330604 AGGTGGAGTAGTGGCTCGTA 59.669 55.000 0.00 0.0 36.41 3.43 R
2826 2847 3.972403 AGTGTATGCGCGTGTATATCAA 58.028 40.909 13.61 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 6.660949 GGGTCCCATAGAGAAATAAATGGATG 59.339 42.308 1.78 0.00 41.20 3.51
112 113 5.754782 TGTACTCCATAAGATGTGCCAAAT 58.245 37.500 0.00 0.00 0.00 2.32
173 174 4.643334 ACTATTCATGCAGCATGTGTGAAT 59.357 37.500 30.38 24.96 46.29 2.57
330 331 4.037565 TGACATGTACGATAAGGCCACTAG 59.962 45.833 5.01 0.00 0.00 2.57
400 401 1.674057 CTCATCATCCCTACGCCCC 59.326 63.158 0.00 0.00 0.00 5.80
480 481 1.224722 GAGGGATCGATCTTTGGCGC 61.225 60.000 23.96 0.00 0.00 6.53
773 774 8.615211 GGTGGTATATTTTAGAAAGTTTACCCG 58.385 37.037 11.76 0.00 34.00 5.28
801 802 1.001181 CCACCCAAACAAGAATGCCAG 59.999 52.381 0.00 0.00 0.00 4.85
809 810 1.030457 CAAGAATGCCAGATCAGCCC 58.970 55.000 5.41 0.00 0.00 5.19
884 885 3.938963 GGACGGATTGCAGATTGAACTTA 59.061 43.478 0.00 0.00 0.00 2.24
2107 2120 1.047801 GATTGGGGCCAACAAACTGT 58.952 50.000 14.99 0.22 38.88 3.55
2826 2847 2.677199 CATCAGTACAGACACAAGCGT 58.323 47.619 0.00 0.00 0.00 5.07
2852 2873 0.806102 ACACGCGCATACACTCATCC 60.806 55.000 5.73 0.00 0.00 3.51
2892 2913 1.625818 CACCCTATCCCTATGAGCACC 59.374 57.143 0.00 0.00 0.00 5.01
2919 2940 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
2939 2960 6.925211 TCATCTTGAGATTTACGAAGTCACT 58.075 36.000 0.00 0.00 35.39 3.41
2956 2977 3.736482 CTGTAGGCGCCTCGTCGTC 62.736 68.421 36.73 17.21 36.23 4.20
3002 3023 2.600388 CGCATCGCCGGAAATTCTA 58.400 52.632 5.05 0.00 0.00 2.10
3330 3351 3.148340 CCGTAGGCCTTTGTACACC 57.852 57.895 12.58 0.00 46.14 4.16
3331 3352 0.738412 CCGTAGGCCTTTGTACACCG 60.738 60.000 12.58 0.64 46.14 4.94
3332 3353 0.037975 CGTAGGCCTTTGTACACCGT 60.038 55.000 12.58 0.00 0.00 4.83
3333 3354 1.202114 CGTAGGCCTTTGTACACCGTA 59.798 52.381 12.58 0.00 0.00 4.02
3334 3355 2.733227 CGTAGGCCTTTGTACACCGTAG 60.733 54.545 12.58 0.00 0.00 3.51
3335 3356 0.036671 AGGCCTTTGTACACCGTAGC 60.037 55.000 0.00 0.00 0.00 3.58
3336 3357 0.320946 GGCCTTTGTACACCGTAGCA 60.321 55.000 0.00 0.00 0.00 3.49
3337 3358 0.794473 GCCTTTGTACACCGTAGCAC 59.206 55.000 0.00 0.00 0.00 4.40
3338 3359 1.435577 CCTTTGTACACCGTAGCACC 58.564 55.000 0.00 0.00 0.00 5.01
3339 3360 1.270412 CCTTTGTACACCGTAGCACCA 60.270 52.381 0.00 0.00 0.00 4.17
3340 3361 2.485903 CTTTGTACACCGTAGCACCAA 58.514 47.619 0.00 0.00 0.00 3.67
3341 3362 2.616634 TTGTACACCGTAGCACCAAA 57.383 45.000 0.00 0.00 0.00 3.28
3342 3363 2.843401 TGTACACCGTAGCACCAAAT 57.157 45.000 0.00 0.00 0.00 2.32
3343 3364 2.690786 TGTACACCGTAGCACCAAATC 58.309 47.619 0.00 0.00 0.00 2.17
3344 3365 2.037381 TGTACACCGTAGCACCAAATCA 59.963 45.455 0.00 0.00 0.00 2.57
3345 3366 2.264005 ACACCGTAGCACCAAATCAA 57.736 45.000 0.00 0.00 0.00 2.57
3346 3367 1.877443 ACACCGTAGCACCAAATCAAC 59.123 47.619 0.00 0.00 0.00 3.18
3347 3368 1.199097 CACCGTAGCACCAAATCAACC 59.801 52.381 0.00 0.00 0.00 3.77
3348 3369 1.202830 ACCGTAGCACCAAATCAACCA 60.203 47.619 0.00 0.00 0.00 3.67
3349 3370 1.883275 CCGTAGCACCAAATCAACCAA 59.117 47.619 0.00 0.00 0.00 3.67
3350 3371 2.294791 CCGTAGCACCAAATCAACCAAA 59.705 45.455 0.00 0.00 0.00 3.28
3351 3372 3.305110 CGTAGCACCAAATCAACCAAAC 58.695 45.455 0.00 0.00 0.00 2.93
3352 3373 3.243234 CGTAGCACCAAATCAACCAAACA 60.243 43.478 0.00 0.00 0.00 2.83
3353 3374 4.558496 CGTAGCACCAAATCAACCAAACAT 60.558 41.667 0.00 0.00 0.00 2.71
3354 3375 3.993920 AGCACCAAATCAACCAAACATC 58.006 40.909 0.00 0.00 0.00 3.06
3355 3376 3.387374 AGCACCAAATCAACCAAACATCA 59.613 39.130 0.00 0.00 0.00 3.07
3356 3377 3.494251 GCACCAAATCAACCAAACATCAC 59.506 43.478 0.00 0.00 0.00 3.06
3357 3378 4.691175 CACCAAATCAACCAAACATCACA 58.309 39.130 0.00 0.00 0.00 3.58
3358 3379 4.507388 CACCAAATCAACCAAACATCACAC 59.493 41.667 0.00 0.00 0.00 3.82
3359 3380 4.161189 ACCAAATCAACCAAACATCACACA 59.839 37.500 0.00 0.00 0.00 3.72
3360 3381 4.507388 CCAAATCAACCAAACATCACACAC 59.493 41.667 0.00 0.00 0.00 3.82
3361 3382 4.998671 AATCAACCAAACATCACACACA 57.001 36.364 0.00 0.00 0.00 3.72
3362 3383 4.998671 ATCAACCAAACATCACACACAA 57.001 36.364 0.00 0.00 0.00 3.33
3363 3384 4.103365 TCAACCAAACATCACACACAAC 57.897 40.909 0.00 0.00 0.00 3.32
3364 3385 3.507622 TCAACCAAACATCACACACAACA 59.492 39.130 0.00 0.00 0.00 3.33
3365 3386 4.159321 TCAACCAAACATCACACACAACAT 59.841 37.500 0.00 0.00 0.00 2.71
3366 3387 5.358160 TCAACCAAACATCACACACAACATA 59.642 36.000 0.00 0.00 0.00 2.29
3367 3388 5.181690 ACCAAACATCACACACAACATAC 57.818 39.130 0.00 0.00 0.00 2.39
3368 3389 4.887071 ACCAAACATCACACACAACATACT 59.113 37.500 0.00 0.00 0.00 2.12
3369 3390 5.359576 ACCAAACATCACACACAACATACTT 59.640 36.000 0.00 0.00 0.00 2.24
3370 3391 5.686841 CCAAACATCACACACAACATACTTG 59.313 40.000 0.00 0.00 0.00 3.16
3371 3392 4.488126 ACATCACACACAACATACTTGC 57.512 40.909 0.00 0.00 0.00 4.01
3372 3393 4.136796 ACATCACACACAACATACTTGCT 58.863 39.130 0.00 0.00 0.00 3.91
3373 3394 5.304778 ACATCACACACAACATACTTGCTA 58.695 37.500 0.00 0.00 0.00 3.49
3374 3395 5.179368 ACATCACACACAACATACTTGCTAC 59.821 40.000 0.00 0.00 0.00 3.58
3375 3396 4.956085 TCACACACAACATACTTGCTACT 58.044 39.130 0.00 0.00 0.00 2.57
3376 3397 6.091718 TCACACACAACATACTTGCTACTA 57.908 37.500 0.00 0.00 0.00 1.82
3377 3398 6.697395 TCACACACAACATACTTGCTACTAT 58.303 36.000 0.00 0.00 0.00 2.12
3378 3399 7.158697 TCACACACAACATACTTGCTACTATT 58.841 34.615 0.00 0.00 0.00 1.73
3379 3400 8.308207 TCACACACAACATACTTGCTACTATTA 58.692 33.333 0.00 0.00 0.00 0.98
3380 3401 8.931775 CACACACAACATACTTGCTACTATTAA 58.068 33.333 0.00 0.00 0.00 1.40
3381 3402 9.496873 ACACACAACATACTTGCTACTATTAAA 57.503 29.630 0.00 0.00 0.00 1.52
3392 3413 9.780186 ACTTGCTACTATTAAATTCATACTCCC 57.220 33.333 0.00 0.00 0.00 4.30
3394 3415 9.998106 TTGCTACTATTAAATTCATACTCCCTC 57.002 33.333 0.00 0.00 0.00 4.30
3395 3416 8.594550 TGCTACTATTAAATTCATACTCCCTCC 58.405 37.037 0.00 0.00 0.00 4.30
3396 3417 7.760340 GCTACTATTAAATTCATACTCCCTCCG 59.240 40.741 0.00 0.00 0.00 4.63
3397 3418 7.613551 ACTATTAAATTCATACTCCCTCCGT 57.386 36.000 0.00 0.00 0.00 4.69
3398 3419 8.030913 ACTATTAAATTCATACTCCCTCCGTT 57.969 34.615 0.00 0.00 0.00 4.44
3399 3420 8.148999 ACTATTAAATTCATACTCCCTCCGTTC 58.851 37.037 0.00 0.00 0.00 3.95
3400 3421 3.454371 AATTCATACTCCCTCCGTTCG 57.546 47.619 0.00 0.00 0.00 3.95
3401 3422 1.108776 TTCATACTCCCTCCGTTCGG 58.891 55.000 4.74 4.74 0.00 4.30
3402 3423 0.033796 TCATACTCCCTCCGTTCGGT 60.034 55.000 11.04 0.00 0.00 4.69
3403 3424 1.212688 TCATACTCCCTCCGTTCGGTA 59.787 52.381 11.04 0.00 0.00 4.02
3404 3425 2.158564 TCATACTCCCTCCGTTCGGTAT 60.159 50.000 11.04 0.00 0.00 2.73
3405 3426 2.442236 TACTCCCTCCGTTCGGTATT 57.558 50.000 11.04 0.00 0.00 1.89
3406 3427 2.442236 ACTCCCTCCGTTCGGTATTA 57.558 50.000 11.04 0.00 0.00 0.98
3407 3428 2.027385 ACTCCCTCCGTTCGGTATTAC 58.973 52.381 11.04 0.00 0.00 1.89
3408 3429 1.339291 CTCCCTCCGTTCGGTATTACC 59.661 57.143 11.04 2.50 34.05 2.85
3409 3430 1.113788 CCCTCCGTTCGGTATTACCA 58.886 55.000 13.22 0.00 38.47 3.25
3410 3431 1.481772 CCCTCCGTTCGGTATTACCAA 59.518 52.381 13.22 4.08 38.47 3.67
3411 3432 2.543641 CCTCCGTTCGGTATTACCAAC 58.456 52.381 13.22 13.50 38.47 3.77
3412 3433 2.543641 CTCCGTTCGGTATTACCAACC 58.456 52.381 13.22 0.00 38.47 3.77
3413 3434 1.898472 TCCGTTCGGTATTACCAACCA 59.102 47.619 13.22 3.20 38.47 3.67
3414 3435 2.301296 TCCGTTCGGTATTACCAACCAA 59.699 45.455 13.22 4.24 38.47 3.67
3415 3436 3.072944 CCGTTCGGTATTACCAACCAAA 58.927 45.455 13.22 0.00 38.47 3.28
3416 3437 3.120234 CCGTTCGGTATTACCAACCAAAC 60.120 47.826 13.22 7.53 38.47 2.93
3417 3438 3.497640 CGTTCGGTATTACCAACCAAACA 59.502 43.478 13.22 0.00 38.47 2.83
3418 3439 4.154556 CGTTCGGTATTACCAACCAAACAT 59.845 41.667 13.22 0.00 38.47 2.71
3419 3440 5.633927 GTTCGGTATTACCAACCAAACATC 58.366 41.667 13.22 0.00 38.47 3.06
3420 3441 4.907809 TCGGTATTACCAACCAAACATCA 58.092 39.130 13.22 0.00 38.47 3.07
3421 3442 5.502079 TCGGTATTACCAACCAAACATCAT 58.498 37.500 13.22 0.00 38.47 2.45
3422 3443 6.651086 TCGGTATTACCAACCAAACATCATA 58.349 36.000 13.22 0.00 38.47 2.15
3423 3444 6.539464 TCGGTATTACCAACCAAACATCATAC 59.461 38.462 13.22 0.00 38.47 2.39
3424 3445 6.316640 CGGTATTACCAACCAAACATCATACA 59.683 38.462 13.22 0.00 38.47 2.29
3425 3446 7.148222 CGGTATTACCAACCAAACATCATACAA 60.148 37.037 13.22 0.00 38.47 2.41
3426 3447 8.188139 GGTATTACCAACCAAACATCATACAAG 58.812 37.037 8.03 0.00 38.42 3.16
3427 3448 8.952278 GTATTACCAACCAAACATCATACAAGA 58.048 33.333 0.00 0.00 0.00 3.02
3428 3449 7.825331 TTACCAACCAAACATCATACAAGAA 57.175 32.000 0.00 0.00 0.00 2.52
3429 3450 6.331369 ACCAACCAAACATCATACAAGAAG 57.669 37.500 0.00 0.00 0.00 2.85
3430 3451 5.163513 CCAACCAAACATCATACAAGAAGC 58.836 41.667 0.00 0.00 0.00 3.86
3431 3452 5.047802 CCAACCAAACATCATACAAGAAGCT 60.048 40.000 0.00 0.00 0.00 3.74
3432 3453 6.449698 CAACCAAACATCATACAAGAAGCTT 58.550 36.000 0.00 0.00 0.00 3.74
3433 3454 6.017400 ACCAAACATCATACAAGAAGCTTG 57.983 37.500 2.10 5.67 0.00 4.01
3434 3455 4.860907 CCAAACATCATACAAGAAGCTTGC 59.139 41.667 2.10 0.00 0.00 4.01
3435 3456 5.336213 CCAAACATCATACAAGAAGCTTGCT 60.336 40.000 2.10 0.00 0.00 3.91
3436 3457 5.972107 AACATCATACAAGAAGCTTGCTT 57.028 34.783 2.10 7.65 0.00 3.91
3437 3458 5.306532 ACATCATACAAGAAGCTTGCTTG 57.693 39.130 24.71 24.71 46.20 4.01
3438 3459 5.005740 ACATCATACAAGAAGCTTGCTTGA 58.994 37.500 29.35 19.42 44.16 3.02
3439 3460 5.474532 ACATCATACAAGAAGCTTGCTTGAA 59.525 36.000 29.35 18.30 44.16 2.69
3440 3461 5.618056 TCATACAAGAAGCTTGCTTGAAG 57.382 39.130 29.35 21.49 44.16 3.02
3441 3462 5.065914 TCATACAAGAAGCTTGCTTGAAGT 58.934 37.500 29.35 17.76 44.16 3.01
3442 3463 5.532406 TCATACAAGAAGCTTGCTTGAAGTT 59.468 36.000 29.35 17.53 44.16 2.66
3443 3464 4.037858 ACAAGAAGCTTGCTTGAAGTTG 57.962 40.909 29.35 12.00 44.16 3.16
3444 3465 3.696051 ACAAGAAGCTTGCTTGAAGTTGA 59.304 39.130 29.35 0.00 44.16 3.18
3445 3466 4.340381 ACAAGAAGCTTGCTTGAAGTTGAT 59.660 37.500 29.35 13.47 44.16 2.57
3446 3467 5.532406 ACAAGAAGCTTGCTTGAAGTTGATA 59.468 36.000 29.35 0.00 44.16 2.15
3447 3468 6.039717 ACAAGAAGCTTGCTTGAAGTTGATAA 59.960 34.615 29.35 0.00 44.16 1.75
3448 3469 6.830873 AGAAGCTTGCTTGAAGTTGATAAT 57.169 33.333 12.92 0.00 33.73 1.28
3449 3470 7.224522 AGAAGCTTGCTTGAAGTTGATAATT 57.775 32.000 12.92 0.00 33.73 1.40
3450 3471 7.664758 AGAAGCTTGCTTGAAGTTGATAATTT 58.335 30.769 12.92 0.00 33.73 1.82
3451 3472 8.796475 AGAAGCTTGCTTGAAGTTGATAATTTA 58.204 29.630 12.92 0.00 33.73 1.40
3452 3473 8.976986 AAGCTTGCTTGAAGTTGATAATTTAG 57.023 30.769 7.09 0.00 33.73 1.85
3453 3474 8.340618 AGCTTGCTTGAAGTTGATAATTTAGA 57.659 30.769 0.00 0.00 33.73 2.10
3454 3475 8.796475 AGCTTGCTTGAAGTTGATAATTTAGAA 58.204 29.630 0.00 0.00 33.73 2.10
3455 3476 9.070149 GCTTGCTTGAAGTTGATAATTTAGAAG 57.930 33.333 0.00 0.00 33.73 2.85
3472 3493 9.799106 AATTTAGAAGAAAGAAGATCCAACTCA 57.201 29.630 0.00 0.00 0.00 3.41
3473 3494 9.799106 ATTTAGAAGAAAGAAGATCCAACTCAA 57.201 29.630 0.00 0.00 0.00 3.02
3474 3495 9.627123 TTTAGAAGAAAGAAGATCCAACTCAAA 57.373 29.630 0.00 0.00 0.00 2.69
3475 3496 7.503521 AGAAGAAAGAAGATCCAACTCAAAC 57.496 36.000 0.00 0.00 0.00 2.93
3476 3497 7.056635 AGAAGAAAGAAGATCCAACTCAAACA 58.943 34.615 0.00 0.00 0.00 2.83
3477 3498 7.557719 AGAAGAAAGAAGATCCAACTCAAACAA 59.442 33.333 0.00 0.00 0.00 2.83
3478 3499 7.830099 AGAAAGAAGATCCAACTCAAACAAT 57.170 32.000 0.00 0.00 0.00 2.71
3479 3500 7.655490 AGAAAGAAGATCCAACTCAAACAATG 58.345 34.615 0.00 0.00 0.00 2.82
3480 3501 6.966534 AAGAAGATCCAACTCAAACAATGT 57.033 33.333 0.00 0.00 0.00 2.71
3481 3502 8.463930 AAAGAAGATCCAACTCAAACAATGTA 57.536 30.769 0.00 0.00 0.00 2.29
3482 3503 8.463930 AAGAAGATCCAACTCAAACAATGTAA 57.536 30.769 0.00 0.00 0.00 2.41
3483 3504 7.875971 AGAAGATCCAACTCAAACAATGTAAC 58.124 34.615 0.00 0.00 0.00 2.50
3484 3505 7.502226 AGAAGATCCAACTCAAACAATGTAACA 59.498 33.333 0.00 0.00 0.00 2.41
3485 3506 7.581213 AGATCCAACTCAAACAATGTAACAA 57.419 32.000 0.00 0.00 0.00 2.83
3486 3507 8.181904 AGATCCAACTCAAACAATGTAACAAT 57.818 30.769 0.00 0.00 0.00 2.71
3487 3508 8.299570 AGATCCAACTCAAACAATGTAACAATC 58.700 33.333 0.00 0.00 0.00 2.67
3488 3509 6.434596 TCCAACTCAAACAATGTAACAATCG 58.565 36.000 0.00 0.00 0.00 3.34
3489 3510 5.116983 CCAACTCAAACAATGTAACAATCGC 59.883 40.000 0.00 0.00 0.00 4.58
3490 3511 5.689383 ACTCAAACAATGTAACAATCGCT 57.311 34.783 0.00 0.00 0.00 4.93
3491 3512 5.689819 ACTCAAACAATGTAACAATCGCTC 58.310 37.500 0.00 0.00 0.00 5.03
3492 3513 5.238432 ACTCAAACAATGTAACAATCGCTCA 59.762 36.000 0.00 0.00 0.00 4.26
3493 3514 6.072508 ACTCAAACAATGTAACAATCGCTCAT 60.073 34.615 0.00 0.00 0.00 2.90
3494 3515 6.085573 TCAAACAATGTAACAATCGCTCATG 58.914 36.000 0.00 0.00 0.00 3.07
3495 3516 5.627499 AACAATGTAACAATCGCTCATGT 57.373 34.783 0.00 0.00 0.00 3.21
3496 3517 6.735678 AACAATGTAACAATCGCTCATGTA 57.264 33.333 0.00 0.00 0.00 2.29
3497 3518 6.106877 ACAATGTAACAATCGCTCATGTAC 57.893 37.500 0.00 0.00 0.00 2.90
3498 3519 5.641636 ACAATGTAACAATCGCTCATGTACA 59.358 36.000 0.00 0.00 0.00 2.90
3499 3520 5.973651 ATGTAACAATCGCTCATGTACAG 57.026 39.130 0.33 0.00 0.00 2.74
3500 3521 4.816392 TGTAACAATCGCTCATGTACAGT 58.184 39.130 0.33 0.00 0.00 3.55
3501 3522 5.234752 TGTAACAATCGCTCATGTACAGTT 58.765 37.500 0.33 0.00 0.00 3.16
3502 3523 6.391537 TGTAACAATCGCTCATGTACAGTTA 58.608 36.000 0.33 0.00 0.00 2.24
3503 3524 7.039270 TGTAACAATCGCTCATGTACAGTTAT 58.961 34.615 0.33 0.00 0.00 1.89
3504 3525 6.985188 AACAATCGCTCATGTACAGTTATT 57.015 33.333 0.33 0.00 0.00 1.40
3505 3526 9.027129 GTAACAATCGCTCATGTACAGTTATTA 57.973 33.333 0.33 0.00 0.00 0.98
3506 3527 8.662781 AACAATCGCTCATGTACAGTTATTAT 57.337 30.769 0.33 0.00 0.00 1.28
3507 3528 8.662781 ACAATCGCTCATGTACAGTTATTATT 57.337 30.769 0.33 0.00 0.00 1.40
3508 3529 9.109393 ACAATCGCTCATGTACAGTTATTATTT 57.891 29.630 0.33 0.00 0.00 1.40
3509 3530 9.935682 CAATCGCTCATGTACAGTTATTATTTT 57.064 29.630 0.33 0.00 0.00 1.82
3512 3533 8.609176 TCGCTCATGTACAGTTATTATTTTTCC 58.391 33.333 0.33 0.00 0.00 3.13
3513 3534 8.394877 CGCTCATGTACAGTTATTATTTTTCCA 58.605 33.333 0.33 0.00 0.00 3.53
3519 3540 9.906660 TGTACAGTTATTATTTTTCCAAGCTTG 57.093 29.630 19.93 19.93 0.00 4.01
3522 3543 9.860898 ACAGTTATTATTTTTCCAAGCTTGATC 57.139 29.630 28.05 3.03 0.00 2.92
3523 3544 9.859427 CAGTTATTATTTTTCCAAGCTTGATCA 57.141 29.630 28.05 8.28 0.00 2.92
3528 3549 9.783081 ATTATTTTTCCAAGCTTGATCAACTTT 57.217 25.926 28.05 7.81 0.00 2.66
3529 3550 9.612066 TTATTTTTCCAAGCTTGATCAACTTTT 57.388 25.926 28.05 6.48 0.00 2.27
3530 3551 7.920160 TTTTTCCAAGCTTGATCAACTTTTT 57.080 28.000 28.05 3.08 0.00 1.94
3531 3552 6.907206 TTTCCAAGCTTGATCAACTTTTTG 57.093 33.333 28.05 6.32 0.00 2.44
3532 3553 4.370917 TCCAAGCTTGATCAACTTTTTGC 58.629 39.130 28.05 11.96 32.17 3.68
3533 3554 3.495753 CCAAGCTTGATCAACTTTTTGCC 59.504 43.478 28.05 0.79 32.17 4.52
3534 3555 3.017265 AGCTTGATCAACTTTTTGCCG 57.983 42.857 3.38 0.00 32.17 5.69
3535 3556 2.362077 AGCTTGATCAACTTTTTGCCGT 59.638 40.909 3.38 0.00 32.17 5.68
3536 3557 3.568007 AGCTTGATCAACTTTTTGCCGTA 59.432 39.130 3.38 0.00 32.17 4.02
3537 3558 4.218417 AGCTTGATCAACTTTTTGCCGTAT 59.782 37.500 3.38 0.00 32.17 3.06
3538 3559 4.558860 GCTTGATCAACTTTTTGCCGTATC 59.441 41.667 3.38 0.00 32.17 2.24
3539 3560 5.697473 TTGATCAACTTTTTGCCGTATCA 57.303 34.783 3.38 0.00 32.17 2.15
3540 3561 5.697473 TGATCAACTTTTTGCCGTATCAA 57.303 34.783 0.00 0.00 32.17 2.57
3541 3562 6.078202 TGATCAACTTTTTGCCGTATCAAA 57.922 33.333 0.00 0.00 34.47 2.69
3542 3563 5.918011 TGATCAACTTTTTGCCGTATCAAAC 59.082 36.000 0.00 0.00 35.86 2.93
3543 3564 5.250235 TCAACTTTTTGCCGTATCAAACA 57.750 34.783 0.00 0.00 35.86 2.83
3544 3565 5.277825 TCAACTTTTTGCCGTATCAAACAG 58.722 37.500 0.00 0.00 38.80 3.16
3545 3566 5.066634 TCAACTTTTTGCCGTATCAAACAGA 59.933 36.000 12.18 0.00 36.41 3.41
3546 3567 5.705609 ACTTTTTGCCGTATCAAACAGAT 57.294 34.783 12.18 0.00 36.41 2.90
3547 3568 5.460646 ACTTTTTGCCGTATCAAACAGATG 58.539 37.500 12.18 0.00 36.41 2.90
3548 3569 5.240623 ACTTTTTGCCGTATCAAACAGATGA 59.759 36.000 12.18 0.00 36.41 2.92
3549 3570 4.678509 TTTGCCGTATCAAACAGATGAC 57.321 40.909 0.00 0.00 37.57 3.06
3550 3571 3.326836 TGCCGTATCAAACAGATGACA 57.673 42.857 0.00 0.00 37.57 3.58
3551 3572 3.000041 TGCCGTATCAAACAGATGACAC 59.000 45.455 0.00 0.00 37.57 3.67
3552 3573 3.262420 GCCGTATCAAACAGATGACACT 58.738 45.455 0.00 0.00 37.57 3.55
3553 3574 3.307242 GCCGTATCAAACAGATGACACTC 59.693 47.826 0.00 0.00 37.57 3.51
3554 3575 4.494484 CCGTATCAAACAGATGACACTCA 58.506 43.478 0.00 0.00 37.57 3.41
3555 3576 5.111989 CCGTATCAAACAGATGACACTCAT 58.888 41.667 0.00 0.00 40.34 2.90
3565 3586 3.555527 ATGACACTCATCTCACCCATG 57.444 47.619 0.00 0.00 29.59 3.66
3566 3587 2.259917 TGACACTCATCTCACCCATGT 58.740 47.619 0.00 0.00 0.00 3.21
3567 3588 2.234661 TGACACTCATCTCACCCATGTC 59.765 50.000 0.00 0.00 36.40 3.06
3568 3589 1.205655 ACACTCATCTCACCCATGTCG 59.794 52.381 0.00 0.00 0.00 4.35
3569 3590 0.176680 ACTCATCTCACCCATGTCGC 59.823 55.000 0.00 0.00 0.00 5.19
3570 3591 0.463204 CTCATCTCACCCATGTCGCT 59.537 55.000 0.00 0.00 0.00 4.93
3571 3592 0.904649 TCATCTCACCCATGTCGCTT 59.095 50.000 0.00 0.00 0.00 4.68
3572 3593 1.134699 TCATCTCACCCATGTCGCTTC 60.135 52.381 0.00 0.00 0.00 3.86
3573 3594 0.179000 ATCTCACCCATGTCGCTTCC 59.821 55.000 0.00 0.00 0.00 3.46
3574 3595 1.811266 CTCACCCATGTCGCTTCCG 60.811 63.158 0.00 0.00 0.00 4.30
3575 3596 2.047274 CACCCATGTCGCTTCCGT 60.047 61.111 0.00 0.00 35.54 4.69
3576 3597 1.216977 CACCCATGTCGCTTCCGTA 59.783 57.895 0.00 0.00 35.54 4.02
3577 3598 0.806102 CACCCATGTCGCTTCCGTAG 60.806 60.000 0.00 0.00 35.54 3.51
3578 3599 1.255667 ACCCATGTCGCTTCCGTAGT 61.256 55.000 0.00 0.00 35.54 2.73
3579 3600 0.806102 CCCATGTCGCTTCCGTAGTG 60.806 60.000 0.00 0.00 35.54 2.74
3580 3601 0.172578 CCATGTCGCTTCCGTAGTGA 59.827 55.000 0.00 0.00 41.00 3.41
3581 3602 1.202417 CCATGTCGCTTCCGTAGTGAT 60.202 52.381 1.99 0.00 44.70 3.06
3582 3603 2.540515 CATGTCGCTTCCGTAGTGATT 58.459 47.619 1.99 0.00 44.70 2.57
3583 3604 1.990799 TGTCGCTTCCGTAGTGATTG 58.009 50.000 1.99 0.00 44.70 2.67
3584 3605 1.542472 TGTCGCTTCCGTAGTGATTGA 59.458 47.619 1.99 0.00 44.70 2.57
3585 3606 2.165641 TGTCGCTTCCGTAGTGATTGAT 59.834 45.455 1.99 0.00 44.70 2.57
3586 3607 2.789893 GTCGCTTCCGTAGTGATTGATC 59.210 50.000 1.99 0.00 44.70 2.92
3587 3608 2.128035 CGCTTCCGTAGTGATTGATCC 58.872 52.381 0.00 0.00 36.43 3.36
3588 3609 2.481276 CGCTTCCGTAGTGATTGATCCA 60.481 50.000 0.00 0.00 36.43 3.41
3589 3610 2.866762 GCTTCCGTAGTGATTGATCCAC 59.133 50.000 0.00 0.00 34.89 4.02
3590 3611 3.430929 GCTTCCGTAGTGATTGATCCACT 60.431 47.826 8.01 8.01 45.75 4.00
3591 3612 4.363999 CTTCCGTAGTGATTGATCCACTC 58.636 47.826 6.40 0.23 43.18 3.51
3592 3613 2.693591 TCCGTAGTGATTGATCCACTCC 59.306 50.000 6.40 0.00 43.18 3.85
3593 3614 2.430694 CCGTAGTGATTGATCCACTCCA 59.569 50.000 6.40 0.00 43.18 3.86
3594 3615 3.070159 CCGTAGTGATTGATCCACTCCAT 59.930 47.826 6.40 0.00 43.18 3.41
3595 3616 4.443457 CCGTAGTGATTGATCCACTCCATT 60.443 45.833 6.40 0.00 43.18 3.16
3596 3617 4.509230 CGTAGTGATTGATCCACTCCATTG 59.491 45.833 6.40 0.00 43.18 2.82
3597 3618 3.894759 AGTGATTGATCCACTCCATTGG 58.105 45.455 0.00 0.00 40.55 3.16
3598 3619 2.360165 GTGATTGATCCACTCCATTGGC 59.640 50.000 0.00 0.00 36.48 4.52
3599 3620 2.025131 TGATTGATCCACTCCATTGGCA 60.025 45.455 0.00 0.00 36.48 4.92
3600 3621 2.601240 TTGATCCACTCCATTGGCAA 57.399 45.000 0.68 0.68 36.48 4.52
3601 3622 2.832643 TGATCCACTCCATTGGCAAT 57.167 45.000 6.96 6.96 36.48 3.56
3602 3623 3.949586 TGATCCACTCCATTGGCAATA 57.050 42.857 13.23 0.00 36.48 1.90
3603 3624 4.248174 TGATCCACTCCATTGGCAATAA 57.752 40.909 13.23 3.39 36.48 1.40
3604 3625 4.608269 TGATCCACTCCATTGGCAATAAA 58.392 39.130 13.23 3.02 36.48 1.40
3605 3626 5.022122 TGATCCACTCCATTGGCAATAAAA 58.978 37.500 13.23 0.43 36.48 1.52
3606 3627 5.483231 TGATCCACTCCATTGGCAATAAAAA 59.517 36.000 13.23 0.00 36.48 1.94
3607 3628 5.404466 TCCACTCCATTGGCAATAAAAAG 57.596 39.130 13.23 10.01 36.48 2.27
3608 3629 3.934579 CCACTCCATTGGCAATAAAAAGC 59.065 43.478 13.23 0.00 0.00 3.51
3609 3630 4.563168 CCACTCCATTGGCAATAAAAAGCA 60.563 41.667 13.23 0.00 0.00 3.91
3610 3631 4.628333 CACTCCATTGGCAATAAAAAGCAG 59.372 41.667 13.23 0.00 0.00 4.24
3611 3632 4.284234 ACTCCATTGGCAATAAAAAGCAGT 59.716 37.500 13.23 0.00 0.00 4.40
3612 3633 4.819769 TCCATTGGCAATAAAAAGCAGTC 58.180 39.130 13.23 0.00 0.00 3.51
3613 3634 4.282957 TCCATTGGCAATAAAAAGCAGTCA 59.717 37.500 13.23 0.00 0.00 3.41
3614 3635 4.628333 CCATTGGCAATAAAAAGCAGTCAG 59.372 41.667 13.23 0.00 0.00 3.51
3615 3636 4.935352 TTGGCAATAAAAAGCAGTCAGT 57.065 36.364 0.00 0.00 0.00 3.41
3616 3637 4.503741 TGGCAATAAAAAGCAGTCAGTC 57.496 40.909 0.00 0.00 0.00 3.51
3617 3638 3.255642 TGGCAATAAAAAGCAGTCAGTCC 59.744 43.478 0.00 0.00 0.00 3.85
3618 3639 3.255642 GGCAATAAAAAGCAGTCAGTCCA 59.744 43.478 0.00 0.00 0.00 4.02
3619 3640 4.229876 GCAATAAAAAGCAGTCAGTCCAC 58.770 43.478 0.00 0.00 0.00 4.02
3620 3641 4.261572 GCAATAAAAAGCAGTCAGTCCACA 60.262 41.667 0.00 0.00 0.00 4.17
3621 3642 5.565439 GCAATAAAAAGCAGTCAGTCCACAT 60.565 40.000 0.00 0.00 0.00 3.21
3622 3643 5.886960 ATAAAAAGCAGTCAGTCCACATC 57.113 39.130 0.00 0.00 0.00 3.06
3623 3644 2.936919 AAAGCAGTCAGTCCACATCA 57.063 45.000 0.00 0.00 0.00 3.07
3624 3645 2.936919 AAGCAGTCAGTCCACATCAA 57.063 45.000 0.00 0.00 0.00 2.57
3625 3646 2.936919 AGCAGTCAGTCCACATCAAA 57.063 45.000 0.00 0.00 0.00 2.69
3626 3647 2.775890 AGCAGTCAGTCCACATCAAAG 58.224 47.619 0.00 0.00 0.00 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.095718 GCCCTTGTTGTCGTCTCATTTC 60.096 50.000 0.00 0.00 0.00 2.17
78 79 1.064003 TGGAGTACAAGCCCATGTGT 58.936 50.000 0.00 0.00 34.75 3.72
112 113 5.968528 ATTTTTGTGGGCGACTTTATACA 57.031 34.783 0.31 0.00 0.00 2.29
330 331 2.348591 CGGAGCTTCGTTCAAACTTGTC 60.349 50.000 6.14 0.00 0.00 3.18
378 379 1.272769 GGCGTAGGGATGATGAGGTAC 59.727 57.143 0.00 0.00 0.00 3.34
400 401 3.926616 ACAGGTTCCTCAAACATCTACG 58.073 45.455 0.00 0.00 39.81 3.51
682 683 9.685828 TTAACTTTGAATATACAAACAAGCCAC 57.314 29.630 0.00 0.00 36.11 5.01
761 762 2.816087 GGGTTTCCTCGGGTAAACTTTC 59.184 50.000 3.33 0.00 36.17 2.62
773 774 1.686587 CTTGTTTGGGTGGGTTTCCTC 59.313 52.381 0.00 0.00 0.00 3.71
801 802 1.000145 TTTTTCCCCCGGGCTGATC 60.000 57.895 17.73 0.00 34.68 2.92
824 825 8.474831 TGAATCCTTATTATTCTCGAACTGTCA 58.525 33.333 0.00 0.00 34.95 3.58
884 885 5.999205 TCAGATTGCCCAACATGTTTAAT 57.001 34.783 8.77 7.49 0.00 1.40
1898 1908 1.227853 AGCTCCACGGTGTTGGTTC 60.228 57.895 7.45 0.00 37.93 3.62
2107 2120 0.330604 AGGTGGAGTAGTGGCTCGTA 59.669 55.000 0.00 0.00 36.41 3.43
2826 2847 3.972403 AGTGTATGCGCGTGTATATCAA 58.028 40.909 13.61 0.00 0.00 2.57
2852 2873 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
2892 2913 1.153745 CCGGCTCAGTCTTTCGGAG 60.154 63.158 0.00 0.00 42.94 4.63
2919 2940 6.528423 CCTACAGTGACTTCGTAAATCTCAAG 59.472 42.308 0.00 0.00 0.00 3.02
2939 2960 3.807538 GACGACGAGGCGCCTACA 61.808 66.667 32.97 0.00 33.86 2.74
2999 3020 9.567776 TCGCATTATTCCTGGATTTATTTTAGA 57.432 29.630 0.00 0.00 0.00 2.10
3002 3023 7.147976 GCTCGCATTATTCCTGGATTTATTTT 58.852 34.615 0.00 0.00 0.00 1.82
3055 3076 2.169978 GGTTAGGTGGACAGTGGTATCC 59.830 54.545 0.00 0.00 35.37 2.59
3326 3347 1.877443 GTTGATTTGGTGCTACGGTGT 59.123 47.619 0.00 0.00 0.00 4.16
3327 3348 1.199097 GGTTGATTTGGTGCTACGGTG 59.801 52.381 0.00 0.00 0.00 4.94
3328 3349 1.202830 TGGTTGATTTGGTGCTACGGT 60.203 47.619 0.00 0.00 0.00 4.83
3329 3350 1.529226 TGGTTGATTTGGTGCTACGG 58.471 50.000 0.00 0.00 0.00 4.02
3330 3351 3.243234 TGTTTGGTTGATTTGGTGCTACG 60.243 43.478 0.00 0.00 0.00 3.51
3331 3352 4.314740 TGTTTGGTTGATTTGGTGCTAC 57.685 40.909 0.00 0.00 0.00 3.58
3332 3353 4.586421 TGATGTTTGGTTGATTTGGTGCTA 59.414 37.500 0.00 0.00 0.00 3.49
3333 3354 3.387374 TGATGTTTGGTTGATTTGGTGCT 59.613 39.130 0.00 0.00 0.00 4.40
3334 3355 3.494251 GTGATGTTTGGTTGATTTGGTGC 59.506 43.478 0.00 0.00 0.00 5.01
3335 3356 4.507388 GTGTGATGTTTGGTTGATTTGGTG 59.493 41.667 0.00 0.00 0.00 4.17
3336 3357 4.161189 TGTGTGATGTTTGGTTGATTTGGT 59.839 37.500 0.00 0.00 0.00 3.67
3337 3358 4.507388 GTGTGTGATGTTTGGTTGATTTGG 59.493 41.667 0.00 0.00 0.00 3.28
3338 3359 5.107824 TGTGTGTGATGTTTGGTTGATTTG 58.892 37.500 0.00 0.00 0.00 2.32
3339 3360 5.336150 TGTGTGTGATGTTTGGTTGATTT 57.664 34.783 0.00 0.00 0.00 2.17
3340 3361 4.998671 TGTGTGTGATGTTTGGTTGATT 57.001 36.364 0.00 0.00 0.00 2.57
3341 3362 4.159321 TGTTGTGTGTGATGTTTGGTTGAT 59.841 37.500 0.00 0.00 0.00 2.57
3342 3363 3.507622 TGTTGTGTGTGATGTTTGGTTGA 59.492 39.130 0.00 0.00 0.00 3.18
3343 3364 3.842820 TGTTGTGTGTGATGTTTGGTTG 58.157 40.909 0.00 0.00 0.00 3.77
3344 3365 4.734398 ATGTTGTGTGTGATGTTTGGTT 57.266 36.364 0.00 0.00 0.00 3.67
3345 3366 4.887071 AGTATGTTGTGTGTGATGTTTGGT 59.113 37.500 0.00 0.00 0.00 3.67
3346 3367 5.437289 AGTATGTTGTGTGTGATGTTTGG 57.563 39.130 0.00 0.00 0.00 3.28
3347 3368 5.173673 GCAAGTATGTTGTGTGTGATGTTTG 59.826 40.000 0.00 0.00 0.00 2.93
3348 3369 5.067674 AGCAAGTATGTTGTGTGTGATGTTT 59.932 36.000 0.00 0.00 0.00 2.83
3349 3370 4.580167 AGCAAGTATGTTGTGTGTGATGTT 59.420 37.500 0.00 0.00 0.00 2.71
3350 3371 4.136796 AGCAAGTATGTTGTGTGTGATGT 58.863 39.130 0.00 0.00 0.00 3.06
3351 3372 4.754372 AGCAAGTATGTTGTGTGTGATG 57.246 40.909 0.00 0.00 0.00 3.07
3352 3373 5.551233 AGTAGCAAGTATGTTGTGTGTGAT 58.449 37.500 0.00 0.00 0.00 3.06
3353 3374 4.956085 AGTAGCAAGTATGTTGTGTGTGA 58.044 39.130 0.00 0.00 0.00 3.58
3354 3375 6.968131 ATAGTAGCAAGTATGTTGTGTGTG 57.032 37.500 0.00 0.00 0.00 3.82
3355 3376 9.496873 TTTAATAGTAGCAAGTATGTTGTGTGT 57.503 29.630 0.00 0.00 0.00 3.72
3366 3387 9.780186 GGGAGTATGAATTTAATAGTAGCAAGT 57.220 33.333 0.00 0.00 0.00 3.16
3368 3389 9.998106 GAGGGAGTATGAATTTAATAGTAGCAA 57.002 33.333 0.00 0.00 0.00 3.91
3369 3390 8.594550 GGAGGGAGTATGAATTTAATAGTAGCA 58.405 37.037 0.00 0.00 0.00 3.49
3370 3391 7.760340 CGGAGGGAGTATGAATTTAATAGTAGC 59.240 40.741 0.00 0.00 0.00 3.58
3371 3392 8.804204 ACGGAGGGAGTATGAATTTAATAGTAG 58.196 37.037 0.00 0.00 0.00 2.57
3372 3393 8.716674 ACGGAGGGAGTATGAATTTAATAGTA 57.283 34.615 0.00 0.00 0.00 1.82
3373 3394 7.613551 ACGGAGGGAGTATGAATTTAATAGT 57.386 36.000 0.00 0.00 0.00 2.12
3374 3395 7.328737 CGAACGGAGGGAGTATGAATTTAATAG 59.671 40.741 0.00 0.00 0.00 1.73
3375 3396 7.149973 CGAACGGAGGGAGTATGAATTTAATA 58.850 38.462 0.00 0.00 0.00 0.98
3376 3397 5.989777 CGAACGGAGGGAGTATGAATTTAAT 59.010 40.000 0.00 0.00 0.00 1.40
3377 3398 5.353938 CGAACGGAGGGAGTATGAATTTAA 58.646 41.667 0.00 0.00 0.00 1.52
3378 3399 4.202182 CCGAACGGAGGGAGTATGAATTTA 60.202 45.833 7.53 0.00 37.50 1.40
3379 3400 3.431766 CCGAACGGAGGGAGTATGAATTT 60.432 47.826 7.53 0.00 37.50 1.82
3380 3401 2.102588 CCGAACGGAGGGAGTATGAATT 59.897 50.000 7.53 0.00 37.50 2.17
3381 3402 1.687123 CCGAACGGAGGGAGTATGAAT 59.313 52.381 7.53 0.00 37.50 2.57
3382 3403 1.108776 CCGAACGGAGGGAGTATGAA 58.891 55.000 7.53 0.00 37.50 2.57
3383 3404 0.033796 ACCGAACGGAGGGAGTATGA 60.034 55.000 20.14 0.00 38.96 2.15
3384 3405 1.683943 TACCGAACGGAGGGAGTATG 58.316 55.000 20.14 0.00 38.96 2.39
3385 3406 2.671896 ATACCGAACGGAGGGAGTAT 57.328 50.000 20.14 3.41 38.96 2.12
3386 3407 2.442236 AATACCGAACGGAGGGAGTA 57.558 50.000 20.14 1.06 38.96 2.59
3387 3408 2.027385 GTAATACCGAACGGAGGGAGT 58.973 52.381 20.14 4.26 38.96 3.85
3388 3409 1.339291 GGTAATACCGAACGGAGGGAG 59.661 57.143 20.14 0.00 38.96 4.30
3389 3410 1.341877 TGGTAATACCGAACGGAGGGA 60.342 52.381 20.14 2.73 42.58 4.20
3390 3411 1.113788 TGGTAATACCGAACGGAGGG 58.886 55.000 20.14 0.00 42.58 4.30
3391 3412 2.543641 GTTGGTAATACCGAACGGAGG 58.456 52.381 20.14 0.00 42.58 4.30
3392 3413 2.094078 TGGTTGGTAATACCGAACGGAG 60.094 50.000 20.14 0.00 42.53 4.63
3393 3414 1.898472 TGGTTGGTAATACCGAACGGA 59.102 47.619 20.14 4.23 42.53 4.69
3394 3415 2.383368 TGGTTGGTAATACCGAACGG 57.617 50.000 9.99 11.83 42.53 4.44
3395 3416 4.069289 GTTTGGTTGGTAATACCGAACG 57.931 45.455 9.99 0.00 42.53 3.95
3397 3418 5.314529 TGATGTTTGGTTGGTAATACCGAA 58.685 37.500 0.00 0.00 42.58 4.30
3398 3419 4.907809 TGATGTTTGGTTGGTAATACCGA 58.092 39.130 4.83 0.00 42.58 4.69
3399 3420 5.828299 ATGATGTTTGGTTGGTAATACCG 57.172 39.130 4.83 0.00 42.58 4.02
3400 3421 7.633193 TGTATGATGTTTGGTTGGTAATACC 57.367 36.000 1.71 1.71 39.22 2.73
3401 3422 8.952278 TCTTGTATGATGTTTGGTTGGTAATAC 58.048 33.333 0.00 0.00 0.00 1.89
3402 3423 9.521841 TTCTTGTATGATGTTTGGTTGGTAATA 57.478 29.630 0.00 0.00 0.00 0.98
3403 3424 8.415950 TTCTTGTATGATGTTTGGTTGGTAAT 57.584 30.769 0.00 0.00 0.00 1.89
3404 3425 7.523052 GCTTCTTGTATGATGTTTGGTTGGTAA 60.523 37.037 0.00 0.00 0.00 2.85
3405 3426 6.072175 GCTTCTTGTATGATGTTTGGTTGGTA 60.072 38.462 0.00 0.00 0.00 3.25
3406 3427 5.278957 GCTTCTTGTATGATGTTTGGTTGGT 60.279 40.000 0.00 0.00 0.00 3.67
3407 3428 5.047802 AGCTTCTTGTATGATGTTTGGTTGG 60.048 40.000 0.00 0.00 0.00 3.77
3408 3429 6.017400 AGCTTCTTGTATGATGTTTGGTTG 57.983 37.500 0.00 0.00 0.00 3.77
3409 3430 6.449698 CAAGCTTCTTGTATGATGTTTGGTT 58.550 36.000 0.00 0.00 32.70 3.67
3410 3431 5.565439 GCAAGCTTCTTGTATGATGTTTGGT 60.565 40.000 0.00 0.00 34.96 3.67
3411 3432 4.860907 GCAAGCTTCTTGTATGATGTTTGG 59.139 41.667 0.00 0.00 34.96 3.28
3412 3433 5.706916 AGCAAGCTTCTTGTATGATGTTTG 58.293 37.500 0.00 0.00 36.31 2.93
3413 3434 5.972107 AGCAAGCTTCTTGTATGATGTTT 57.028 34.783 0.00 0.00 0.00 2.83
3414 3435 5.474532 TCAAGCAAGCTTCTTGTATGATGTT 59.525 36.000 24.93 0.00 41.13 2.71
3415 3436 5.005740 TCAAGCAAGCTTCTTGTATGATGT 58.994 37.500 24.93 0.00 41.13 3.06
3416 3437 5.556355 TCAAGCAAGCTTCTTGTATGATG 57.444 39.130 24.93 9.92 41.13 3.07
3417 3438 5.709164 ACTTCAAGCAAGCTTCTTGTATGAT 59.291 36.000 24.93 13.06 41.13 2.45
3418 3439 5.065914 ACTTCAAGCAAGCTTCTTGTATGA 58.934 37.500 24.93 12.62 41.13 2.15
3419 3440 5.368256 ACTTCAAGCAAGCTTCTTGTATG 57.632 39.130 24.93 20.05 41.13 2.39
3420 3441 5.532406 TCAACTTCAAGCAAGCTTCTTGTAT 59.468 36.000 24.93 15.48 41.13 2.29
3421 3442 4.881273 TCAACTTCAAGCAAGCTTCTTGTA 59.119 37.500 24.93 19.20 41.13 2.41
3422 3443 3.696051 TCAACTTCAAGCAAGCTTCTTGT 59.304 39.130 24.93 12.67 41.13 3.16
3423 3444 4.297299 TCAACTTCAAGCAAGCTTCTTG 57.703 40.909 22.36 22.36 41.57 3.02
3424 3445 6.639632 TTATCAACTTCAAGCAAGCTTCTT 57.360 33.333 3.97 0.34 35.17 2.52
3425 3446 6.830873 ATTATCAACTTCAAGCAAGCTTCT 57.169 33.333 3.97 0.00 35.17 2.85
3426 3447 7.880059 AAATTATCAACTTCAAGCAAGCTTC 57.120 32.000 3.97 0.00 35.17 3.86
3427 3448 8.796475 TCTAAATTATCAACTTCAAGCAAGCTT 58.204 29.630 0.59 0.59 35.17 3.74
3428 3449 8.340618 TCTAAATTATCAACTTCAAGCAAGCT 57.659 30.769 0.00 0.00 35.17 3.74
3429 3450 8.970691 TTCTAAATTATCAACTTCAAGCAAGC 57.029 30.769 0.00 0.00 35.17 4.01
3446 3467 9.799106 TGAGTTGGATCTTCTTTCTTCTAAATT 57.201 29.630 0.00 0.00 0.00 1.82
3447 3468 9.799106 TTGAGTTGGATCTTCTTTCTTCTAAAT 57.201 29.630 0.00 0.00 0.00 1.40
3448 3469 9.627123 TTTGAGTTGGATCTTCTTTCTTCTAAA 57.373 29.630 0.00 0.00 0.00 1.85
3449 3470 9.057089 GTTTGAGTTGGATCTTCTTTCTTCTAA 57.943 33.333 0.00 0.00 0.00 2.10
3450 3471 8.210946 TGTTTGAGTTGGATCTTCTTTCTTCTA 58.789 33.333 0.00 0.00 0.00 2.10
3451 3472 7.056635 TGTTTGAGTTGGATCTTCTTTCTTCT 58.943 34.615 0.00 0.00 0.00 2.85
3452 3473 7.264373 TGTTTGAGTTGGATCTTCTTTCTTC 57.736 36.000 0.00 0.00 0.00 2.87
3453 3474 7.645058 TTGTTTGAGTTGGATCTTCTTTCTT 57.355 32.000 0.00 0.00 0.00 2.52
3454 3475 7.286316 ACATTGTTTGAGTTGGATCTTCTTTCT 59.714 33.333 0.00 0.00 0.00 2.52
3455 3476 7.428826 ACATTGTTTGAGTTGGATCTTCTTTC 58.571 34.615 0.00 0.00 0.00 2.62
3456 3477 7.352079 ACATTGTTTGAGTTGGATCTTCTTT 57.648 32.000 0.00 0.00 0.00 2.52
3457 3478 6.966534 ACATTGTTTGAGTTGGATCTTCTT 57.033 33.333 0.00 0.00 0.00 2.52
3458 3479 7.502226 TGTTACATTGTTTGAGTTGGATCTTCT 59.498 33.333 0.00 0.00 0.00 2.85
3459 3480 7.648142 TGTTACATTGTTTGAGTTGGATCTTC 58.352 34.615 0.00 0.00 0.00 2.87
3460 3481 7.581213 TGTTACATTGTTTGAGTTGGATCTT 57.419 32.000 0.00 0.00 0.00 2.40
3461 3482 7.581213 TTGTTACATTGTTTGAGTTGGATCT 57.419 32.000 0.00 0.00 0.00 2.75
3462 3483 7.271223 CGATTGTTACATTGTTTGAGTTGGATC 59.729 37.037 0.00 0.00 0.00 3.36
3463 3484 7.083858 CGATTGTTACATTGTTTGAGTTGGAT 58.916 34.615 0.00 0.00 0.00 3.41
3464 3485 6.434596 CGATTGTTACATTGTTTGAGTTGGA 58.565 36.000 0.00 0.00 0.00 3.53
3465 3486 5.116983 GCGATTGTTACATTGTTTGAGTTGG 59.883 40.000 0.00 0.00 0.00 3.77
3466 3487 5.914635 AGCGATTGTTACATTGTTTGAGTTG 59.085 36.000 0.00 0.00 0.00 3.16
3467 3488 6.072112 AGCGATTGTTACATTGTTTGAGTT 57.928 33.333 0.00 0.00 0.00 3.01
3468 3489 5.238432 TGAGCGATTGTTACATTGTTTGAGT 59.762 36.000 0.00 0.00 0.00 3.41
3469 3490 5.688823 TGAGCGATTGTTACATTGTTTGAG 58.311 37.500 0.00 0.00 0.00 3.02
3470 3491 5.681337 TGAGCGATTGTTACATTGTTTGA 57.319 34.783 0.00 0.00 0.00 2.69
3471 3492 5.858049 ACATGAGCGATTGTTACATTGTTTG 59.142 36.000 0.00 0.00 0.00 2.93
3472 3493 6.012658 ACATGAGCGATTGTTACATTGTTT 57.987 33.333 0.00 0.00 0.00 2.83
3473 3494 5.627499 ACATGAGCGATTGTTACATTGTT 57.373 34.783 0.00 0.00 0.00 2.83
3474 3495 5.641636 TGTACATGAGCGATTGTTACATTGT 59.358 36.000 0.00 0.00 0.00 2.71
3475 3496 6.105657 TGTACATGAGCGATTGTTACATTG 57.894 37.500 0.00 0.00 0.00 2.82
3476 3497 5.874810 ACTGTACATGAGCGATTGTTACATT 59.125 36.000 0.00 0.00 0.00 2.71
3477 3498 5.419542 ACTGTACATGAGCGATTGTTACAT 58.580 37.500 0.00 0.00 0.00 2.29
3478 3499 4.816392 ACTGTACATGAGCGATTGTTACA 58.184 39.130 0.00 0.00 0.00 2.41
3479 3500 5.779806 AACTGTACATGAGCGATTGTTAC 57.220 39.130 0.00 0.00 0.00 2.50
3480 3501 9.758651 ATAATAACTGTACATGAGCGATTGTTA 57.241 29.630 0.00 0.00 0.00 2.41
3481 3502 6.985188 AATAACTGTACATGAGCGATTGTT 57.015 33.333 0.00 0.00 0.00 2.83
3482 3503 8.662781 AATAATAACTGTACATGAGCGATTGT 57.337 30.769 0.00 0.00 0.00 2.71
3483 3504 9.935682 AAAATAATAACTGTACATGAGCGATTG 57.064 29.630 0.00 0.00 0.00 2.67
3486 3507 8.609176 GGAAAAATAATAACTGTACATGAGCGA 58.391 33.333 0.00 0.00 0.00 4.93
3487 3508 8.394877 TGGAAAAATAATAACTGTACATGAGCG 58.605 33.333 0.00 0.00 0.00 5.03
3493 3514 9.906660 CAAGCTTGGAAAAATAATAACTGTACA 57.093 29.630 19.14 0.00 0.00 2.90
3496 3517 9.860898 GATCAAGCTTGGAAAAATAATAACTGT 57.139 29.630 25.73 0.00 0.00 3.55
3497 3518 9.859427 TGATCAAGCTTGGAAAAATAATAACTG 57.141 29.630 25.73 0.00 0.00 3.16
3502 3523 9.783081 AAAGTTGATCAAGCTTGGAAAAATAAT 57.217 25.926 25.73 9.53 0.00 1.28
3503 3524 9.612066 AAAAGTTGATCAAGCTTGGAAAAATAA 57.388 25.926 25.73 4.61 0.00 1.40
3504 3525 9.612066 AAAAAGTTGATCAAGCTTGGAAAAATA 57.388 25.926 25.73 5.39 0.00 1.40
3505 3526 8.400186 CAAAAAGTTGATCAAGCTTGGAAAAAT 58.600 29.630 25.73 11.76 36.83 1.82
3506 3527 7.626028 GCAAAAAGTTGATCAAGCTTGGAAAAA 60.626 33.333 25.73 12.56 36.83 1.94
3507 3528 6.183360 GCAAAAAGTTGATCAAGCTTGGAAAA 60.183 34.615 25.73 14.23 36.83 2.29
3508 3529 5.294060 GCAAAAAGTTGATCAAGCTTGGAAA 59.706 36.000 25.73 14.56 36.83 3.13
3509 3530 4.810491 GCAAAAAGTTGATCAAGCTTGGAA 59.190 37.500 25.73 13.41 36.83 3.53
3510 3531 4.370917 GCAAAAAGTTGATCAAGCTTGGA 58.629 39.130 25.73 13.14 36.83 3.53
3511 3532 3.495753 GGCAAAAAGTTGATCAAGCTTGG 59.504 43.478 25.73 8.01 36.83 3.61
3512 3533 3.182972 CGGCAAAAAGTTGATCAAGCTTG 59.817 43.478 20.81 20.81 36.83 4.01
3513 3534 3.181476 ACGGCAAAAAGTTGATCAAGCTT 60.181 39.130 8.80 12.13 36.83 3.74
3514 3535 2.362077 ACGGCAAAAAGTTGATCAAGCT 59.638 40.909 8.80 6.56 36.83 3.74
3515 3536 2.742774 ACGGCAAAAAGTTGATCAAGC 58.257 42.857 8.80 7.47 36.83 4.01
3516 3537 5.698832 TGATACGGCAAAAAGTTGATCAAG 58.301 37.500 8.80 0.00 36.83 3.02
3517 3538 5.697473 TGATACGGCAAAAAGTTGATCAA 57.303 34.783 3.38 3.38 36.83 2.57
3518 3539 5.697473 TTGATACGGCAAAAAGTTGATCA 57.303 34.783 0.00 0.00 36.83 2.92
3519 3540 5.918011 TGTTTGATACGGCAAAAAGTTGATC 59.082 36.000 0.00 0.00 39.26 2.92
3520 3541 5.837437 TGTTTGATACGGCAAAAAGTTGAT 58.163 33.333 0.00 0.00 39.26 2.57
3521 3542 5.066634 TCTGTTTGATACGGCAAAAAGTTGA 59.933 36.000 13.83 0.00 41.64 3.18
3522 3543 5.277825 TCTGTTTGATACGGCAAAAAGTTG 58.722 37.500 13.83 0.00 41.64 3.16
3523 3544 5.508200 TCTGTTTGATACGGCAAAAAGTT 57.492 34.783 13.83 0.00 41.64 2.66
3524 3545 5.240623 TCATCTGTTTGATACGGCAAAAAGT 59.759 36.000 13.83 3.93 41.64 2.66
3525 3546 5.569059 GTCATCTGTTTGATACGGCAAAAAG 59.431 40.000 10.04 10.04 42.07 2.27
3526 3547 5.009110 TGTCATCTGTTTGATACGGCAAAAA 59.991 36.000 0.00 0.00 39.26 1.94
3527 3548 4.517075 TGTCATCTGTTTGATACGGCAAAA 59.483 37.500 0.00 0.00 39.26 2.44
3528 3549 4.068599 TGTCATCTGTTTGATACGGCAAA 58.931 39.130 0.00 0.00 35.54 3.68
3529 3550 3.435327 GTGTCATCTGTTTGATACGGCAA 59.565 43.478 0.00 0.00 33.36 4.52
3530 3551 3.000041 GTGTCATCTGTTTGATACGGCA 59.000 45.455 0.00 0.00 33.36 5.69
3531 3552 3.262420 AGTGTCATCTGTTTGATACGGC 58.738 45.455 0.00 0.00 41.17 5.68
3532 3553 4.494484 TGAGTGTCATCTGTTTGATACGG 58.506 43.478 0.00 0.00 41.17 4.02
3545 3566 2.842496 ACATGGGTGAGATGAGTGTCAT 59.158 45.455 0.00 0.00 40.34 3.06
3546 3567 2.234661 GACATGGGTGAGATGAGTGTCA 59.765 50.000 0.00 0.00 35.72 3.58
3547 3568 2.736719 CGACATGGGTGAGATGAGTGTC 60.737 54.545 0.00 0.00 33.15 3.67
3548 3569 1.205655 CGACATGGGTGAGATGAGTGT 59.794 52.381 0.00 0.00 0.00 3.55
3549 3570 1.931906 CGACATGGGTGAGATGAGTG 58.068 55.000 0.00 0.00 0.00 3.51
3550 3571 0.176680 GCGACATGGGTGAGATGAGT 59.823 55.000 0.00 0.00 0.00 3.41
3551 3572 0.463204 AGCGACATGGGTGAGATGAG 59.537 55.000 0.00 0.00 0.00 2.90
3552 3573 0.904649 AAGCGACATGGGTGAGATGA 59.095 50.000 0.00 0.00 0.00 2.92
3553 3574 1.293924 GAAGCGACATGGGTGAGATG 58.706 55.000 0.00 0.00 0.00 2.90
3554 3575 0.179000 GGAAGCGACATGGGTGAGAT 59.821 55.000 0.00 0.00 0.00 2.75
3555 3576 1.596934 GGAAGCGACATGGGTGAGA 59.403 57.895 0.00 0.00 0.00 3.27
3556 3577 1.811266 CGGAAGCGACATGGGTGAG 60.811 63.158 0.00 0.00 0.00 3.51
3557 3578 1.252215 TACGGAAGCGACATGGGTGA 61.252 55.000 0.00 0.00 0.00 4.02
3558 3579 0.806102 CTACGGAAGCGACATGGGTG 60.806 60.000 0.00 0.00 0.00 4.61
3559 3580 1.255667 ACTACGGAAGCGACATGGGT 61.256 55.000 0.00 0.00 0.00 4.51
3560 3581 0.806102 CACTACGGAAGCGACATGGG 60.806 60.000 0.00 0.00 0.00 4.00
3561 3582 0.172578 TCACTACGGAAGCGACATGG 59.827 55.000 0.00 0.00 0.00 3.66
3562 3583 2.209838 ATCACTACGGAAGCGACATG 57.790 50.000 0.00 0.00 0.00 3.21
3563 3584 2.165641 TCAATCACTACGGAAGCGACAT 59.834 45.455 0.00 0.00 0.00 3.06
3564 3585 1.542472 TCAATCACTACGGAAGCGACA 59.458 47.619 0.00 0.00 0.00 4.35
3565 3586 2.273370 TCAATCACTACGGAAGCGAC 57.727 50.000 0.00 0.00 0.00 5.19
3566 3587 2.223735 GGATCAATCACTACGGAAGCGA 60.224 50.000 0.00 0.00 0.00 4.93
3567 3588 2.128035 GGATCAATCACTACGGAAGCG 58.872 52.381 0.00 0.00 0.00 4.68
3568 3589 2.866762 GTGGATCAATCACTACGGAAGC 59.133 50.000 0.00 0.00 32.78 3.86
3569 3590 4.363999 GAGTGGATCAATCACTACGGAAG 58.636 47.826 3.43 0.00 44.51 3.46
3570 3591 3.132289 GGAGTGGATCAATCACTACGGAA 59.868 47.826 3.43 0.00 44.51 4.30
3571 3592 2.693591 GGAGTGGATCAATCACTACGGA 59.306 50.000 3.43 0.00 44.51 4.69
3572 3593 2.430694 TGGAGTGGATCAATCACTACGG 59.569 50.000 7.93 0.00 46.30 4.02
3573 3594 3.801114 TGGAGTGGATCAATCACTACG 57.199 47.619 7.93 0.00 46.30 3.51
3574 3595 4.818546 CCAATGGAGTGGATCAATCACTAC 59.181 45.833 0.00 6.00 44.51 2.73
3575 3596 4.686944 GCCAATGGAGTGGATCAATCACTA 60.687 45.833 2.05 0.00 44.51 2.74
3576 3597 3.894759 CCAATGGAGTGGATCAATCACT 58.105 45.455 0.00 3.10 46.82 3.41
3577 3598 2.360165 GCCAATGGAGTGGATCAATCAC 59.640 50.000 2.05 0.00 41.65 3.06
3578 3599 2.025131 TGCCAATGGAGTGGATCAATCA 60.025 45.455 2.05 0.00 41.65 2.57
3579 3600 2.658285 TGCCAATGGAGTGGATCAATC 58.342 47.619 2.05 0.00 41.65 2.67
3580 3601 2.832643 TGCCAATGGAGTGGATCAAT 57.167 45.000 2.05 0.00 41.65 2.57
3581 3602 2.601240 TTGCCAATGGAGTGGATCAA 57.399 45.000 2.05 0.00 41.65 2.57
3582 3603 2.832643 ATTGCCAATGGAGTGGATCA 57.167 45.000 2.05 0.00 41.65 2.92
3583 3604 5.596836 TTTTATTGCCAATGGAGTGGATC 57.403 39.130 2.05 0.00 41.65 3.36
3584 3605 5.627503 GCTTTTTATTGCCAATGGAGTGGAT 60.628 40.000 2.05 0.00 41.65 3.41
3585 3606 4.322650 GCTTTTTATTGCCAATGGAGTGGA 60.323 41.667 2.05 0.00 41.65 4.02
3586 3607 3.934579 GCTTTTTATTGCCAATGGAGTGG 59.065 43.478 2.05 0.00 42.05 4.00
3587 3608 4.567971 TGCTTTTTATTGCCAATGGAGTG 58.432 39.130 2.05 0.00 0.00 3.51
3588 3609 4.284234 ACTGCTTTTTATTGCCAATGGAGT 59.716 37.500 2.05 0.00 0.00 3.85
3589 3610 4.824289 ACTGCTTTTTATTGCCAATGGAG 58.176 39.130 2.05 0.00 0.00 3.86
3590 3611 4.282957 TGACTGCTTTTTATTGCCAATGGA 59.717 37.500 2.05 0.00 0.00 3.41
3591 3612 4.567971 TGACTGCTTTTTATTGCCAATGG 58.432 39.130 0.00 0.00 0.00 3.16
3592 3613 5.232463 ACTGACTGCTTTTTATTGCCAATG 58.768 37.500 0.00 0.00 0.00 2.82
3593 3614 5.473039 GACTGACTGCTTTTTATTGCCAAT 58.527 37.500 0.00 0.00 0.00 3.16
3594 3615 4.261994 GGACTGACTGCTTTTTATTGCCAA 60.262 41.667 0.00 0.00 0.00 4.52
3595 3616 3.255642 GGACTGACTGCTTTTTATTGCCA 59.744 43.478 0.00 0.00 0.00 4.92
3596 3617 3.255642 TGGACTGACTGCTTTTTATTGCC 59.744 43.478 0.00 0.00 0.00 4.52
3597 3618 4.229876 GTGGACTGACTGCTTTTTATTGC 58.770 43.478 0.00 0.00 0.00 3.56
3598 3619 5.437289 TGTGGACTGACTGCTTTTTATTG 57.563 39.130 0.00 0.00 0.00 1.90
3599 3620 5.769662 TGATGTGGACTGACTGCTTTTTATT 59.230 36.000 0.00 0.00 0.00 1.40
3600 3621 5.316167 TGATGTGGACTGACTGCTTTTTAT 58.684 37.500 0.00 0.00 0.00 1.40
3601 3622 4.713553 TGATGTGGACTGACTGCTTTTTA 58.286 39.130 0.00 0.00 0.00 1.52
3602 3623 3.554934 TGATGTGGACTGACTGCTTTTT 58.445 40.909 0.00 0.00 0.00 1.94
3603 3624 3.213206 TGATGTGGACTGACTGCTTTT 57.787 42.857 0.00 0.00 0.00 2.27
3604 3625 2.936919 TGATGTGGACTGACTGCTTT 57.063 45.000 0.00 0.00 0.00 3.51
3605 3626 2.936919 TTGATGTGGACTGACTGCTT 57.063 45.000 0.00 0.00 0.00 3.91
3606 3627 2.775890 CTTTGATGTGGACTGACTGCT 58.224 47.619 0.00 0.00 0.00 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.