>input_sequence_46729
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----------------------------------------ATCTAGAGTCTAGACCAGAATCGATCGGTGCTATCGCACG
AGTCTGCAATGCCGAGGTTGCGTCGCCTGCGGCCGCGCAGGGTCGTCCAAGACCAAGACGACCGCCTCAGCGCCCTCCCC
GAAGAGCTGATCCGCCTCATACTGAGCAGGCTGGACACCCGCAGCGCGCTCTCCACCGCCGTCCTCGCCAGGCGCTGGGC
ACGCCTCCCTCGCGATCTTCCGGCGTACGACTTGAGGGTGGGCGACATACTCCCGCCACAGTACGACCAGACCGTCGCCC
TCCGCCGGCGCAACCTGCCGCGCGACACGGCTCAGGCCAGAGTCCTAGACAGCTTGATGGCCAGCTGCGAGGTCTCTACC
ATGCGGGCGTTCGAGGATGGCATCACCGGCTTCTTGGAGGGGGACG---------CACGCCGTTGCGTCAACACCCTCCG
TCTCGAGTTCTTCCACACACACGACGGCGGCCGCATAGTAGACCGCCTGATCGCAGACGCGGTCGGCGTATGGGGAGTGC
AAGATTTGGAGGTGGTCGTCAGGCCAGCGTCCCAGGAGCACGAGCCTTGGCCGGCCTACAGCTTCCCCCACGATCGCCTC
AAGGATGGACACTGGTCGCGCCTGCACAGCCTGACGATCGGCAACTGCATGCTCCCGCCGAGGCTGCACTGCTATGACAC
GCTCACCAAGCTGGTCTTGCGAGACATGCCCGCTTCCACGCCCGTCGGCGTGTACGAGAGGGCCCTGAGCGAGTGCAACC
AGCTGCAGGTGCTGCATCTCACGTCCTGCAGCTGCGTTGAGGACCGTCTGGTGGTGTGTTCACAGATCAGGGAGCTCGTC
GTGGAAGCGTGCTCCTTCATGGTGATCGAGCTGCAGGACCTCCCGATGCTTGCCCACCTGGCCTGCCGAACCAACACCGT
GGAGCTCGTGTTCGGCTCTGTTCCGTGCCTCACGCACACTAACCTCACCTTCTTTGTAGAGGAGGATATCCTGGTTTTGC
CGCCGCTGCCGCACCACCATGATCAGCTCAACCACTTCCTTGGTA---TGTCCCCAACCATGGGCAACCTCGTCATCCGC
TTCACCGGACCCAAGATGTGGATTGGGGCCAACAAACTGTACGAGCCACTACTCCACCTCAA-AAGGCTCCTTGTTGCCG
ACCTGCCTTCAAACTGGGACGTCTCATGGACGCGCACTCTCCTGATGGCCGCGCCATCGCTCGAGGCACTGCACATCAAC
GTGGCTCACTCCGAGC---TCCCTGAAACCTACGGGATAATATGGTCAATCCGGAGCCAGAAGCAATGCCACCCTCACAT
GAAGGAGCTGGTCATGATTGGATTCACGCTCACGCGGCTCCAAATGGAGTTTCTCAAGTATATTGTGACCGCGTGCACTT
CCTTACAACGCCTTGTTTTGCTCAAGGATGGCCATGTCCGATACAACGGACTCTGGGATTGGGACATGGTTCGT---GGA
CTAGAAGAATGTAACTGGAGAGATCATGATAAAAGGAGGCTGAGAAGGTTGATC-AAGTCCGGGCCCAACCCTCTCGTTG
AACTCATCTTGGGATGATCTTTTTCCTTTTTATGATCTTTTGTTCGTAACTATTGTCTATCTATATACTACTATATACAG
TAATAAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>chr1B_1_TraesCS1B01G408100
GGTGGGTCCCATAGAGAAATAAATGGATGAAATGAGACGACAACAAGGGCTCACCTGATGCCTACTCGCTAAGAGGGCAC
ACATGGGCTTGTACTCCATAAGATGTGCCAAATGTATAAAGTCGCCCACAAAAATTTCCCTGTCGTTTGAACTATTCATG
CAGCATGTGTGAATTGTTCTTGTTCGTAAAATGTATATTTGTCTTCATCCTTCCACGAGAATTGTTCTGGTAGTTAAAAA
CCATGTCCAGTTAATCACATAATTGCCAATCATTGGGATGGTGGACACTCATGCAAAAATTCAATCATGACATGTACGAT
AAGGCCACTAGACAAGTTTGAACGAAGCTCCGAAGCCTTACAGCTCGGTGAGCGATGGGTACCTCATCATCCCTACGCCC
CGTAGATGTTTGAGGAACCTGTAAGGGGAAAATACCCCAGGTGAGACACCCAGGTCGATCCGAGGGATCGATCTTTGGCG
CGTTGGGTGGCCACCGCCTAAACCCACCATCGAGACACAGTCTCGTCCTCTATGCGGAGTTTATTTTGGAAGGCCCGCGT
GGCGTGGAAATAGACTCGGGAAACGAAGAAATACTCGGTGGTATGCGTGAAACTTGTACGCAATTTTTTTTGTTATTTAA
ATCTGAATGGTTGCGAGTAAAGTCAATATATGTGTGAATTTGGTGGCTTGTTTGTATATTCAAAGTTAAAAATGATAGTT
TAAGAGATAGAGATATTAATGTATAGGGGTGGTATATTTTAGAAAGTTTACCCGAGGAAACCCACCCAAACAAGAATGCC
AGATCAGCCCGGGGGAAAAAAGAATGACAGTTCGAGAATAATAAGGATTCAGGATGCTATTCGGACGGATTGCAGATTGA
ACTTATTAAACATGTTGGGCAATCTGAAAACGAAACGAGAATCCGATCCCAGAGCGGCCTCTAGCTGACCTGACCTGCCT
ACGTGTATATATATAGCGCCAACGCCTCCTGCTTTAGTGCATCTAGAGTCTAGACCAGAATCGATCGGTGCTATCGCACG
AGTCTGCAATGCCGAGGTTGCGTCGCCTGCGGCCGCGCAGGGTCGTCCAAGACCAAGACGACCGCCTCAGCGCCCTCCCC
GAAGAGCTGATCCGCCTCATACTGAGCAGGCTGGACACCCGCAGCGCGCTCTCCACCGCCGTCCTCGCCAGGCGCTGGGC
ACGCCTCCCTCGCGATCTTCCGGCGTACGACTTGAGGGTGGGCGACATACTCCCGCCACAGTACGACCAGACCGTCGCCC
TCCGCCGGCGCAACCTGCCGCGCGACACGGCTCAGGCCAGAGTCCTAGACAGCTTGATGGCCAGCTGCGAGGTCTCTACC
ATGCGGGCGTTCGAGGATGGCATCACCGGCTTCTTGGAGGGGGACG---------CACGCCGTTGCGTCAACACCCTCCG
TCTCGAGTTCTTCCACACACACGACGGCGGCCGCATAGTAGACCGCCTGATCGCAGACGCGGTCGGCGTATGGGGAGTGC
AAGATTTGGAGGTGGTCGTCAGGCCAGCGTCCCAGGAGCACGAGCCTTGGCCGGCCTACAGCTTCCCCCACGATCGCCTC
AAGGATGGACACTGGTCGCGCCTGCACAGCCTGACGATCGGCAACTGCATGCTCCCGCCGAGGCTGCACTGCTATGACAC
GCTCACCAAGCTGGTCTTGCGAGACATGCCCGCTTCCACGCCCGTCGGCGTGTACGAGAGGGCCCTGAGCGAGTGCAACC
AGCTGCAGGTGCTGCATCTCACGTCCTGCAGCTGCGTTGAGGACCGTCTGGTGGTGTGTTCACAGATCAGGGAGCTCGTC
GTGGAAGCGTGCTCCTTCATGGTGATCGAGCTGCAGGACCTCCCGATGCTTGCCCACCTGGCCTGCCGAACCAACACCGT
GGAGCTCGTGTTCGGCTCTGTTCCGTGCCTCACGCACACTAACCTCACCTTCTTTGTAGAGGAGGATATCCTGGTTTTGC
CGCCGCTGCCGCACCACCATGATCAGCTCAACCACTTCCTTGGTA---TGTCCCCAACCATGGGCAACCTCGTCATCCGC
TTCACCGGACCCAAGATGTGGATTGGGGCCAACAAACTGTACGAGCCACTACTCCACCTCAA-AAGGCTCCTTGTTGCCG
ACCTGCCTTCAAACTGGGACGTCTCATGGACGCGCACTCTCCTGATGGCCGCGCCATCGCTCGAGGCACTGCACATCAAC
GTGGCTCACTCCGAGC---TCCCTGAAACCTACGGGATAATATGGTCAATCCGGAGCCAGAAGCAATGCCACCCTCACAT
GAAGGAGCTGGTCATGATTGGATTCACGCTCACGCGGCTCCAAATGGAGTTTCTCAAGTATATTGTGACCGCGTGCACTT
CCTTACAACGCCTTGTTTTGCTCAAGGATGGCCATGTCCGATACAACGGACTCTGGGATTGGGACATGGTTCGT---GGA
CTAGAAGAATGTAACTGGAGAGATCATGATAAAAGGAGGCTGAGAAGGTTGATC-AAGTCCGGGCCCAACCCTCTCGTTG
AACTCATCTTGGGATGATCTTTTTCCTTTTTATGATCTTTTGTTCGTAACTATTGTCTATCTATATACTACTATATACAG
TAATAAATAGCTGATAAGCTTTCTATGCTGAAAGGCTGTTTTATTTAACTGTTGTTGTTCAACATAATGCCGTTCCCTGG
ATTACTCAATGTGCTAATTATGGATTACTCAATGCCTCGTCCCACCTCGATTGCCACCTGGGTGTTTACGGCAACCCTCG
CCTCCCGCATGTCTTTTTTTTTTGAGCATCAGTACAGACACAAGCGTTGATATACACGCGCATACACTCATCCCTATGAA
CGCACACACGCACACCCTATCCCTATGAGCACCTCCGAAAGACTGAGCCGGCATATCATCTTGAGATTTACGAAGTCACT
GTAGGCGCCTCGTCGTCGACGGGAACGTCTCCTCCCACTGAAAGCGCATCGCCGGAAATTCTAAAATAAATCCAGGAATA
ATGCGAGCACCAGGATTTGAACCCTGGTGGGTTGGGGATACCACTGTCCACCTAACCAACTCAACCACAGGTTGATTCGC
CCTCCCGCATGTCATTACCTTCGAAAGCAAAGGGATTTCTTGCCGCGTCGCAAAATTAAGCTGCCACTGTTGTGACGTCC
CCACCCCCTTACGGTTTTGTTCGGTTCCACACGAACCAAAGCTCTATTGGGTGATCCCCCAATCCCCTGACCAACAAACC
CTTCTAATCCATGTGCAACATAGTGTGTTCGGTTAGTCCCGACAGCTTTCCACCGTAGGCCTTTGTACACCGTAGCACCA
AATCAACCAAACATCACACACAACATACTTGCTACTATTAAATTCATACTCCCTCCGTTCGGTATTACCAACCAAACATC
ATACAAGAAGCTTGCTTGAAGTTGATAATTTAGAAGAAAGAAGATCCAACTCAAACAATGTAACAATCGCTCATGTACAG
TTATTATTTTTCCAAGCTTGATCAACTTTTTGCCGTATCAAACAGATGACACTCATCTCACCCATGTCGCTTCCGTAGTG
ATTGATCCACTCCATTGGCAATAAAAAGCAGTCAGTCCACATCAAAG
>chr1B_1
GGTGGGTCCCATAGAGAAATAAATGGATCAAATGAGACGACAACAAGGGCTCACCTGATGCCTACTCGCTAAGAGGGCGC
ACATGGGCTTGTACTCCATAAGATGTGCCAAACGTATAAAGTCGCCCACAAAAATTTCCCTGTCGTTTGAACTATTCATG
CAGCATGTGTGAACTGTTCTTGTTCGTAAAATGTATATTTGTCTTCATCCTTCCACGAGAATTGTTCTGGTAGTTAAAAA
CCATGTCCAGTTAATCACATAATTGCCAATCATTGGGATGGTGGACACTCATGCAAAAATTCAATCATGACATGTACGAT
AAGGCCACTACACAAGTTTGAACGAAGCTCCGAAGCCTTACAGCTCGGTGAGCGATGGATACCTCATCATCCCTACGCCC
TGTAGATGTTTGAGGAACCTGTAAGGGGAAAATACCCCAGGTGAGACACCCAGGTCGATCCGAGGGATCGATCTTTGGCG
GGTTGGGTGGCCACCGCCTAAACCCACCATCGAGACACAGTCTCGTCCTCTATGCGGAGTTTATTTTGGAAGGCCCGCGT
GGCGTGGAAATAGACTCGGGAAACGAAGAAATACTCGGTGGTATGCGTGAAACTTGTACGCAACTTTTTTTGTTATTTAA
ATCTGAATGGTTGCGAGTAAAGTCAATATATGTGTGAATTTGATGGCTTGTTTGTATATTCAAAGTTAAAAATGATAGTT
TAAGAGATAGAGATATTAATGTATAGGGGTGGTATATTTTAAAAAGTTTACCCCAGGAAACCCACCCAAACAAGAATGCC
ACATCAGCCGGGGGGGAAAAAGAACGACAGTTCGAGAATAATAAGGATTCAGGATGCTATTCGGACGGATTGCAGATTGA
ACTTGTTAAACATGTTGGGCAATCTGAAAACGAAACGAGAATCCGATCCCAGAGCGGCCTCTAGCTGACCTGACCTGCCT
ACGTGTATATATATAGCGCCAACGCCTCCTGCTTTAGTGCATCTAGAGTCTAGACCAGAATCGATCGGTGCTATCGCACG
AGTCTGCAATGCCGAGGTTGCGTCGCCTGCGGCCGCGCAGGGTCGTCCAAGACCAAGACGACCGCCTCAGCGCCCTCCCC
GAAGAGCTGATCCGCCTCATACTGAGCAGGCTGGACACCCGCAGCGCGCTCTCCACCGCCGTCCTCGCCAGGCGCTGGGC
ACGCCTCCCTCGCGATCTTCCGGCGTACGACTTGAGGGTGGGCGACATACTCCCGCCACAGTACAACCAGACCGTCGCCC
TCCGCCGGCGCAACCTGCCGCGCGACACGGCTCAGGCCAGAGTCCTAGACAGCTTGATGGCCAGCTGCGAGGTCTCTGCC
ATGCGGGCGTTCGAGGATGGCATCACCGGCTTCTTGGAGGGGGACG---------CACGCCGTTGCGTCAACACCCTCCG
TCTCGAGTTCTTCCACACACACGACGGCGGCCGCATAGTAGACCGCCTGATCGCAGACGCGGTCGGCGTATGGGGAGTGC
AAGATTTGGAGGTGGTCGTCAGGCCATCGTCCCAGGAGCACGAGCCTTGGCCGGCCTACAGCTTCCCCCACGATCGCCTC
AAGGATGGACACTGGTCGCGCCTGCACAGCCTGACGATCGGCAACTGCATGCTCCCGCCGAGGCTGCACTGCTACGACAC
GCTCACCAAGCTGGTCTTGCGAGACATGCCCGCTTCCACGCCCGTCGGCGTGTACGAGAGGGCCCTGAGCGAGTGCAACC
AGCTGCAGGTGCTGCATCTCACGTCCTGCAGCTGCGTTGAGGACCGTCTGGTGGTGTGTTCACAGATCAGGGAGCTCGTC
GTGGAAGCGTGCTCCTTCATGGTGATCGAGCTGCAGGACCTCCCGATGCTTGCCCACCTGGCCTTCCTAACCAACACCGT
GGAGCTCGTGTTCGGCTCTGTTCCGTGCCTCACGCACACTAACCTCACCTTCTTTGTAGAGGAGGATATCCTGGTTTTGC
CGCCGCTGCCGCACCACCATGATCAGCTCAACCACTTCCTTGGTA---TGTCCCCAACCATGGGCAACCTCGTCATCCGC
TTCACCGGACCCAAGATGTGGATTGGGGCCAACAAACTGCACGAGCCACTAGTCCACCTCAA-AAGGCTCCTTGTTGCCG
ACCTGCCTTCAAACTGGGACGTCTCATGGACGCGCACTCTCCTGATGGCCGCGCCATCGCTCGAGGCACTGCACATCAAC
GTGGCTCACTCCGAGC---TCCCTGAAACCTACGGGATAATATGGTCAATCCGGAGCCAGAAGCAATGCCACCCTCACAT
GAAGGAGCTGGTCATGATTGGATTCACGCTCACGCGGCTCCAAATGGAGTTTCTCAAGTATATTGTGACCGCGTGCACTT
CCTTACAACGCCTTGTTTTGCTCAAGGATGGCCATGTCCGATACAACGGACTCTGGGATTGGGACATGGTTCGT---GGA
CTAGAAGAATGTAACTGGAGAGATCATGATAAAAGGAGGCTGAGAAGGTTGATC-AAGTCCGGGCCCAACCCTCTCGTTG
AACTCATCTTGGGATGATCTTTTTCCTTTTTATGATCTTTTGTTCGTAACTATTGTCTATCTATATATTACTATATACAG
TAATAAATAGCTGATAAGCTTTCTATGCTGAAAGGCTGTTTTATTTAACTGTTGTTGTTCAACATAATGCCGTTCCCTGG
ATTACTCAATGTGCTAATTATGGATTACTCAATGCCTCGTCCCACCTCGATTGCCACCTGGGTGTTTACGGCAACCCTCG
CCTCCCGCATGTCTTTTTTTTTTGAGCATCAGTACAGACACAAGCGCTGATATACACGCGCATACACTCATCTCTATGAA
CGCACACACGCACACCCTATCCCTATGAGCACTTCCGAAAGACTGAGCCGGCATATCATGTTGAGATTTACGAAGTCACC
GTAGGCGCCTCGTCGTTGACGGGAACGTCTCCTCCCACTGAAAGCGCATCGCCGGAAATCCTGAAATAAATCCAGGAATA
ATGCGAGCACCAGGATTTGAACCCTGGTGGGTTGGAGATACCACTGTCCACCTAACCAACTCAACCACAGGTTGATTCGC
CCTCCCGCATGTCATTACCTTCGAAAGCAAAGGGATTTCTTGCCGCGTCGCAAAATTAAGCTGCCACTGTTGTGACGTCC
CCACCCCCTTACGGTTTTGTTCGGTTCCACACGAACCAAAGCTCTATTGGGTGATCCCCCAATCCCCTGACCAACAAACC
CTTCTAATCCATGTGCAACATAGTGTGTTCGGTTAGTCCCGACAGCTTTCCACCGTAGGCCTTTGT--------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>chr3B_1015
--------------------------------------------------------------------------------
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------------------------------------------------------CCAGAATCGATCGCCGCCATCGA--G
AGTCCGCCATGCCGAGGTTGCGTCGCATGCGGCCGCGCCGGGCCGTGG------AAGAGGACCGCCTCAGCGCGCTCCCC
GAAGAGCTGATCCGCCTCATACTGAGCCGGCTGGACACCCGCAGCGCGCTCTCGACCGCCGTCCTCGCCAGGCGCTGGGC
ACGCGTCCCCCGCGAGCTCCCAGCGTACGACTTCAGGGTGAGCGACATACTCCTGCCAGAGTACGACCAGACGGTCGCCC
TCCGCCGGCTCAACCTGCCGCGCGACGAGGCTCTGTGCAGGATTGTCGACGGCCCGATGGCGAGCCGCGAGGCCTCTACC
ATGCGCGCGTTCGTGGACGGCGTCACCGGCTTCTTGGAGGCAGACGGCGGCGCCGCACGCCGGTGCCCCAAGACCCTCCG
CCTCGAGTTCTTCCAGACGGACGACGGCGGCCGCATAGTCGACCGCCTGATCACTACCGCTGTCGGCGCGTGGGGAGTGG
AGGACCTGGAGGTGGCCGTCAGGCCGGCGTTC------CACGGGCCCGCGCCGGGCTACGGCATCCC---------CCTC
GAGGACGGCGACAGGTCGCGCCTGCGCAGCCTGATGCTGGGCAACTGCACGCTCCCGCCGAATCTGCACTGCTACGACGC
GCTCACCAAGCTGGTGTTGCGAGACATGGCCGCTTCCACGCCCGCCGACGTGTACGAGAGGGTGTTCAGCGAGTGCGCAC
GGCTGCAGGTGCTGCACCTCACGTCCTGCGGCTGCGTGGGGGACAGTTTGGTGGTGTGTTCACAGATCAGGGAGCTCGTC
GTGGAAGGGTGCTCGTTCATGGAGATGGAGCTGCGGGATCTCCCAATGCTTGCCCGCCTGGCCTGCCTAACCAACACGGT
GGAGCTCGTCTTCGGCTCAGTTCCATGCCTCACGCACACCAACCTCACCTTCTCTGTGGAGGGGGATCCGTTGGTTTTGC
CGCCGGTGCCGCACCACCACGATCAGCTCAACCAGTTCCTGGACA---TGTCGCCGACCATGGAGAACCTCGTCATCCGG
TTCACCGGGCCCAAGACTTGGATTGGGGTCAAGAAACTAGACAAGCCATTGCTCCACCTGAA-GAGGCTCCTTGTCGCCG
ACGTGCCCTCCAACTGGGACGTCTCATGGACGCGCACCCTTCTCATGGCCGCGCCATCACTCGAGGTCCTGCACATCCAT
GTGGCTCACTCGAAGA---TTCCAGAAACATACGGGATCATATGGTCAAGAACGAGCCAGAAGCAATGCCACCCTCACAT
GAAGGAGGTGGTCATGATTGGATTCACACTCACGCGGCTCCAAATGGAGTTTCTAAAGTACGTTGTGAGCACGTGCACAT
CCTTGCAACGTCTTGTTCTTCTCAAGGATGGCTGTGTTCGATACCATGGACTTTGGAATTGGGACATGATCGGG---GAA
CAACAAGAATGCCGGTGGAGAGATCATGATAAAAGGGAGGTGAGAAGAATGATC-AAGTCTGGGCCCAGTCCTCTGGTTG
AACTCATCTTCGGATGATCATTTT--------------------------------------------------------
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>chr3D_1016
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-------------------------------------------------------CAGAATCGATCGCCACCATCGA--G
AGTCCGCCATGCCGAGGTTGCGTCGCGTGCGGCCGGGCCGGGCCGTGG------AAGAGGACCGCCTCAGCGCGCTCCCA
GAAGAGCTGATCCGCCTCATACTGAGCCGGCTGGACACCCGCAGCGCGCTCTCGACCGCCGTCCTCGCCAGGCGCTGGGC
ACGCGTCCCCCGCGAGATCCCAGCGTACGACTTCAGGGTGAGCGACATACTCCCGCTAGAGTACGACCAGACGATCGCCC
TCCGCCGGCTCAACCTGCCGCGCGACGAGGCTCTGTGCAGGATTGTCGACGGCCCGATGGCGAGCTGCGAGGCCTCTACC
ATGCGCGCGTTCGTGGACGGCGTCACCGGCTTCTTGGAGGCAGACGGCGGCGCCGCACGCCGGTGCCCCAAGACCCTCCG
CCTCGAGTTCTTCCAGACGGACGACGGCGCCCGCATAGTCGACCGCCTGATCACTACCGCTGTCGGCGCGTGGGGAGTGG
AGGACCTGGAGGTGGCCGTCAGGCCGGCGTTC------CACGGGCCCCCGCCGGGCTACGGCATCCC---------CCTC
GAGGACGGCGACAGGTCGCGCCTGCGCAGCCTGACGCTGGGCAACTGCACGCTCCCGCCCAAGCTGCACTGCTACGGCGC
GCTCACCAAGCTGGTCTTGCGAGACATGGCCGCTTCCACGCCCGTGGACGTGTACGAGAGGGTGTTCAGCGAGTGCGCAC
GGCTGCAGGCGCTGCACCTCACGTCCTGCGGCTGCGCGGGGGACCGTCTGGTGGTGTGTTCACAGATCAGGGAGTTCGTC
GTGGAAGGGTGCTCGTTCATGGAGATCGAGCTGCGGGACCTCCCAATGCTTGCCCGCCTGGCCTGCCTAACCAACACGGT
GGAGCTCGTCTTCGGCTCGGTTCCGTGCCTCACGCACACCAACCTCACCTTCTTTGTGGAGGAGGATCCGGTGGTTTTGC
CGCCGGTGCCGCACCACCACGATGAGCTCAACCAGTTCCTGGACA---TGTCGCCAACCATGGAGAACCTCGTCATCCGG
TTCACCGGGCC---------GATTGGGGTCAAGAAACTAGACAAGCCATTGCTCCACCTGAAGAAGGCTCCTTGTCGCCG
ACGTGCCCTCCAACTGGGACGTCTCATGGACGCGCACCCTCCTCATGGCCGCGCCATCACTCGAGGTCCTGCACATCCAT
GTGGCTCGCTCGGAGA---TTCCAGAAACTTACGGGATAATATGGTCAAGAACGAGCCAGAAGCAATGCCACCCTCACAT
GAAGGAGCTGGTCATGATTGGATTCACGCTCACGCGGCTCCAAATGGAGTTTCTCAAGTACGTTGTGAGCGCGTGCACAT
CCTTACAACGCCTTGTTCTTCTCAAGGATGGCCGTGTTCGATACCATGGACTTTGGGATTGGGACATGGCCAGG---GAA
CAGCAAGAGTGCCGGTGGAGAGATCATGATAAAAGGGCGGTGAGAAGAATGATCCAA-TCTGGGCCTAGTCCTCTCGTTG
AACTCACCTTGGGAT-----------------------------------------------------------------
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>chr1B_1044
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---CTGCCATGCCGAGGTTGCGTCGCGTGCGGCCGCGCAGGGCCAGCG------AAGAGGACCGCCTCAGCGCGCTTCCC
GACGGGCTGATCCGCCGCATACTGACCAAGCTGGACACCCGCAGCGCGCTCTCCACGGCCGTCCTCGCCAGGCGCTGGGC
ACGCGTCCCCCGCGACCTTCCGGCGTACGACTTCATGGTCAGCGACGTACTCCCGCCGCAGTACGACCGGACCGTCGCCC
TCCGCCGTCGCAACCTGCCGCGCGACGTGGCCTTGGCCAGGGTCCTCGACGGCCTCATGGCCAGCTGCGAGGTCTCCACC
ATGCGGGCGTTCGTCGACGGCATCACCGGTTTCTTGGACGCGGACGGCGGCAAAGCACGCCGGTGCGTCGACACCCTTCG
TCTCGAGTTCTTCCAGACCAACGACGGCGGAGGCGTAGTAGACCGCCTCATCGCCGACGCGGTAGGCGCGTGGGGAGTGG
AAGATCTGGAGGTGGTCGTCAGGCCAGCGTCC------CATGCGCCCGCGCCGGCCTACAGCTTCCCCCACGGCCGCCTC
AAGGACGGCGGCAGGTCGCGCCTCCGCAGCCTGACGCTGGGCAACTGCACGATCCCGCCGAAGCTGGACTGCTATGACGC
GCTCACCACGCTGGTCCTGCGAGACATGCCCGCTTCCACCCCCGTCGGCGTGTACGAGAGGGTGTTGAGCGATTGCGCGC
GGCTGCAGGTGCTGCACCTCACGTCCTGCCTCTGCGCCGACGACCGTCTGGTGGTGTGCTCAGGCATCAGGGAGCTCGTT
GTGGACGCTTGCTCCTTCATGGTGATCGAGCTGCGGGACCTCCCGATGCTTGCCCGCCTGGCCTGCCTAACCAACACCGT
GGAGCTCGTGTTCGGCTCGGTTCCGTGCCTCACGCACACTAACCTCTCCTTCTCCGTAGAGGAGGATACGTTGGTTCTGC
CGCCCCGGCCGCACCACCACGATGAGCTCAACCATTTCCTGGGTA---CGTCGCCAACCATGGCGAACCTCGTCATCCGG
TTCACCGGCTCCAAGAGATGGATTGGATCCGAGGAACTAGACAAGCCTTTGCTCCACCTGAA-AAGGCTCCTTATTGCCG
ACCTGCCTTCCAACTGGGACGTCTCATGGACGCACACCTTCCTGGTGGAGGCGCCATCGCTCGAGGTCCTGCACATCCAT
GTGGCTCACTCGGAGGAGGTTCCAGAGTCGTTCGGGATAATATGGTCGACGGCGAGCCCTACACAATGCCACCCTCACAT
GAAGGAGCTGGTCTTCATCGGATTTACGCTCACCCGACGCCAAATGCAGCTTCTTAAGTACCTCGTGAGCACTTGCACGT
CCTTGCAACGCCTTGTTCTTCTCAAGGATGGTCATGTTCGATACGACGGACTCTGGGATTGGGACATGGTCGGG---GGA
CAACAAGAATGCCAGTGGACAGATCATGATAAAAGGGCCTTGAGAAGGATGATC-AAGTCTGGGCCCAGGCCTCTCGTTC
AACTCATCTTGGCGTGATC-------------------------------------------------------------
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>chr1D_2012
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--------------------GATCAGCTCAACCACTTCCTGCTGGGCGTGTCGACAACCATGGCAAACCTCGTCATCCGG
TTCACCGGGCCCAAGAGATGGATTGGATCCAAGGAACTAGACAAGCCTTTGCTCCACCTGAA-AAGGCTCCTTATTTCCG
ACCTGCCTTCCAACTGGGACATCTCATGGACGCGCCCCTTCTTGATGGACGCGCCGTCACTTGAGGTCCTGCACATCCAC
GTGGCTCACTCGGAGGAGGCTCCAGAGTCGTTCGGGATCATATGGTCAACGGCCGGCCATGAGATATGCCACCCTCACAT
GAAGGAGCTGGTCTTGATCGGATTTACGCTCACGTGACGCCAAATGGAACATCTGAAGTACCTCGTGAGCACCTGCACAT
CCTTGCAACGCCTTGTTCTTCTCAATGGTGGCAATGTTCGATACAACGGACTCTGGGATTGGGACATGGTCGGGCTCGGA
CAGCAAGAATGCCAGTGGAGGGATCATGATAAAAGGGCGTTGAGAAGGATGATTAAAGTCTGGGCCTAGGCCTCTCGTTC
AACTCATCATGGCATGAT--------------------------------------------------------------
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-----------------------------------------------
>SNPs
----------------------------S-------------------------------------------------S-
--------------------------------S-----------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S-----------------------------------------------S---------------------
S-------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
------------------------------------------S-------------------------------------
-----------------------------------------S-----------S--------------------------
-S-------S-----S--------S-------------------------------------------------------
----S---------------------------------------------------------------------------
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-------------------------------------------------------------------S------------
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---------------------------------------S----------------------------------------
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-------------------------------------------------------------------S------------
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----------------------------------------------S-------------------------S-------
--------------------------------S--------------------------S-------------------S
----------------S------------------------------------------S--S-----------------
-----------------------------------S--------------------------------------------
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------------------------------------------------------------------SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_802
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-------------------------------------------------------------CCACCCAAACAAGAATGCC
AG------------------------------------------------------------------------------
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>reverse_2120
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---------------------------------------TACGAGCCACTACTCCACCT---------------------
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>forward_810
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----------------------------------------------------------------------CAAGAATGCC
AGATCAGCCC----------------------------------------------------------------------
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>reverse_2847
--------------------------------------------------------------------------------
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----------------------------------------------TTGATATACACGCGCATACACT------------
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-----------------------------------------------
