Multiple sequence alignment - TraesCS1B01G353400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G353400 chr1B 100.000 2875 0 0 1 2875 583683573 583686447 0.000000e+00 5310.0
1 TraesCS1B01G353400 chr5D 88.033 1220 92 22 1027 2227 378329147 378330331 0.000000e+00 1395.0
2 TraesCS1B01G353400 chr5D 87.951 1220 93 22 1027 2227 80200983 80202167 0.000000e+00 1389.0
3 TraesCS1B01G353400 chr5D 87.653 1223 93 25 1027 2227 559441907 559440721 0.000000e+00 1369.0
4 TraesCS1B01G353400 chr5D 87.234 1222 100 24 1027 2227 296179875 296178689 0.000000e+00 1341.0
5 TraesCS1B01G353400 chr5D 94.857 175 9 0 2266 2440 80202151 80202325 1.010000e-69 274.0
6 TraesCS1B01G353400 chr5D 94.382 178 10 0 2266 2443 559440737 559440560 1.010000e-69 274.0
7 TraesCS1B01G353400 chr5D 94.382 178 9 1 2266 2443 296178705 296178529 3.650000e-69 272.0
8 TraesCS1B01G353400 chr5D 94.286 175 8 1 2266 2440 378330315 378330487 1.700000e-67 267.0
9 TraesCS1B01G353400 chr5D 98.361 61 1 0 2815 2875 296178523 296178463 1.090000e-19 108.0
10 TraesCS1B01G353400 chr5D 98.361 61 1 0 2815 2875 378330496 378330556 1.090000e-19 108.0
11 TraesCS1B01G353400 chr5D 96.721 61 2 0 2815 2875 559440554 559440494 5.070000e-18 102.0
12 TraesCS1B01G353400 chr5D 95.082 61 3 0 2815 2875 80202334 80202394 2.360000e-16 97.1
13 TraesCS1B01G353400 chr1A 91.039 1049 53 22 656 1684 530725895 530726922 0.000000e+00 1378.0
14 TraesCS1B01G353400 chr1A 88.852 610 48 9 2268 2875 530728637 530729228 0.000000e+00 732.0
15 TraesCS1B01G353400 chr1A 88.961 462 43 5 1772 2227 530728192 530728651 5.380000e-157 564.0
16 TraesCS1B01G353400 chr1A 88.000 275 33 0 12 286 530725625 530725899 2.760000e-85 326.0
17 TraesCS1B01G353400 chr1D 87.682 1096 64 38 753 1834 432201463 432202501 0.000000e+00 1210.0
18 TraesCS1B01G353400 chr1D 93.011 558 26 4 2318 2875 432202972 432203516 0.000000e+00 802.0
19 TraesCS1B01G353400 chr1D 89.011 364 38 2 288 650 474970230 474970592 1.570000e-122 449.0
20 TraesCS1B01G353400 chr1D 90.074 272 21 4 15 286 432200850 432201115 5.900000e-92 348.0
21 TraesCS1B01G353400 chr1D 90.179 112 9 2 1822 1931 432202840 432202951 8.300000e-31 145.0
22 TraesCS1B01G353400 chr2A 83.559 590 54 22 980 1541 717819468 717818894 1.980000e-141 512.0
23 TraesCS1B01G353400 chr2A 90.000 360 31 5 289 646 6106424 6106780 7.260000e-126 460.0
24 TraesCS1B01G353400 chr2A 95.238 42 1 1 2228 2268 144924459 144924418 6.650000e-07 65.8
25 TraesCS1B01G353400 chr2A 96.970 33 1 0 1654 1686 717818811 717818779 4.000000e-04 56.5
26 TraesCS1B01G353400 chr5B 90.833 360 28 5 288 645 563165489 563165845 7.210000e-131 477.0
27 TraesCS1B01G353400 chr7B 89.863 365 32 5 288 650 58714892 58715253 5.610000e-127 464.0
28 TraesCS1B01G353400 chr3D 89.503 362 36 2 290 650 428958388 428958748 9.390000e-125 457.0
29 TraesCS1B01G353400 chr2D 89.694 359 34 3 290 646 597962478 597962835 3.380000e-124 455.0
30 TraesCS1B01G353400 chr2D 89.415 359 33 5 291 646 641974721 641975077 5.650000e-122 448.0
31 TraesCS1B01G353400 chr2D 79.713 488 54 25 1065 1541 579963474 579963021 7.740000e-81 311.0
32 TraesCS1B01G353400 chr2D 96.970 33 1 0 1654 1686 579962932 579962900 4.000000e-04 56.5
33 TraesCS1B01G353400 chr3B 89.041 365 35 5 288 650 765840070 765839709 5.650000e-122 448.0
34 TraesCS1B01G353400 chr7D 88.525 366 37 5 288 650 489723756 489723393 3.400000e-119 438.0
35 TraesCS1B01G353400 chr7D 100.000 28 0 0 1119 1146 96663545 96663518 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G353400 chr1B 583683573 583686447 2874 False 5310.000000 5310 100.000000 1 2875 1 chr1B.!!$F1 2874
1 TraesCS1B01G353400 chr5D 378329147 378330556 1409 False 590.000000 1395 93.560000 1027 2875 3 chr5D.!!$F2 1848
2 TraesCS1B01G353400 chr5D 80200983 80202394 1411 False 586.700000 1389 92.630000 1027 2875 3 chr5D.!!$F1 1848
3 TraesCS1B01G353400 chr5D 559440494 559441907 1413 True 581.666667 1369 92.918667 1027 2875 3 chr5D.!!$R2 1848
4 TraesCS1B01G353400 chr5D 296178463 296179875 1412 True 573.666667 1341 93.325667 1027 2875 3 chr5D.!!$R1 1848
5 TraesCS1B01G353400 chr1A 530725625 530729228 3603 False 750.000000 1378 89.213000 12 2875 4 chr1A.!!$F1 2863
6 TraesCS1B01G353400 chr1D 432200850 432203516 2666 False 626.250000 1210 90.236500 15 2875 4 chr1D.!!$F2 2860
7 TraesCS1B01G353400 chr2A 717818779 717819468 689 True 284.250000 512 90.264500 980 1686 2 chr2A.!!$R2 706

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
650 652 0.101219 CTGATTTTTAGCAGGGCCGC 59.899 55.0 11.60 11.60 0.00 6.53 F
651 653 0.323360 TGATTTTTAGCAGGGCCGCT 60.323 50.0 22.65 22.65 46.26 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1604 1918 0.039437 CAGTACGCAGAACCACGAGT 60.039 55.0 0.0 0.0 0.00 4.18 R
2081 3951 0.730265 TTGTTTCACCGACACAGTGC 59.270 50.0 0.0 0.0 35.14 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 4.130118 ACTCCCAGTGATTTATGATTCGC 58.870 43.478 0.00 0.00 0.00 4.70
68 69 4.129380 CTCCCAGTGATTTATGATTCGCA 58.871 43.478 0.00 0.00 0.00 5.10
95 96 4.451557 CGTTTAGGAATATTTTAGCCGCG 58.548 43.478 0.00 0.00 0.00 6.46
103 104 1.878953 ATTTTAGCCGCGTCATAGGG 58.121 50.000 4.92 0.00 0.00 3.53
104 105 0.179067 TTTTAGCCGCGTCATAGGGG 60.179 55.000 4.92 0.00 45.81 4.79
105 106 2.035237 TTTAGCCGCGTCATAGGGGG 62.035 60.000 4.92 0.00 43.57 5.40
115 116 3.636764 GCGTCATAGGGGGAAAAATGAAT 59.363 43.478 0.00 0.00 30.60 2.57
117 118 4.499696 CGTCATAGGGGGAAAAATGAATGC 60.500 45.833 0.00 0.00 30.60 3.56
152 154 7.603784 TGGTGAATTCGGTTATCATGATATGAG 59.396 37.037 16.06 10.09 43.53 2.90
177 179 9.127277 AGCACGCTCCCTTTAATTATTATTTTA 57.873 29.630 0.00 0.00 0.00 1.52
211 213 6.586463 GCTTCCTTTAATTTGAACTTGCCTAC 59.414 38.462 0.00 0.00 0.00 3.18
231 233 5.714806 CCTACCATGGTGTTTATTGTCCTTT 59.285 40.000 28.17 0.00 0.00 3.11
242 244 6.038382 TGTTTATTGTCCTTTGTTCGTGCTTA 59.962 34.615 0.00 0.00 0.00 3.09
295 297 9.283768 TGCATATGTATCTTAATTAAGGGTGTG 57.716 33.333 22.11 13.64 34.14 3.82
296 298 9.284968 GCATATGTATCTTAATTAAGGGTGTGT 57.715 33.333 22.11 9.31 34.14 3.72
301 303 9.483489 TGTATCTTAATTAAGGGTGTGTCTAGA 57.517 33.333 22.11 2.04 34.14 2.43
304 306 8.431910 TCTTAATTAAGGGTGTGTCTAGAACT 57.568 34.615 22.11 0.00 34.14 3.01
305 307 8.529476 TCTTAATTAAGGGTGTGTCTAGAACTC 58.471 37.037 22.11 0.00 34.14 3.01
306 308 6.681729 AATTAAGGGTGTGTCTAGAACTCA 57.318 37.500 0.00 0.00 0.00 3.41
307 309 5.723672 TTAAGGGTGTGTCTAGAACTCAG 57.276 43.478 0.00 0.00 32.30 3.35
308 310 3.246416 AGGGTGTGTCTAGAACTCAGT 57.754 47.619 0.00 0.00 32.30 3.41
309 311 3.158676 AGGGTGTGTCTAGAACTCAGTC 58.841 50.000 0.00 0.00 32.30 3.51
310 312 2.891580 GGGTGTGTCTAGAACTCAGTCA 59.108 50.000 0.00 0.00 32.30 3.41
311 313 3.321111 GGGTGTGTCTAGAACTCAGTCAA 59.679 47.826 0.00 0.00 32.30 3.18
312 314 4.299978 GGTGTGTCTAGAACTCAGTCAAC 58.700 47.826 0.00 0.00 32.30 3.18
313 315 4.038162 GGTGTGTCTAGAACTCAGTCAACT 59.962 45.833 0.00 0.00 32.30 3.16
314 316 4.979197 GTGTGTCTAGAACTCAGTCAACTG 59.021 45.833 3.69 3.69 45.08 3.16
315 317 4.038042 TGTGTCTAGAACTCAGTCAACTGG 59.962 45.833 10.13 4.13 43.91 4.00
324 326 3.380479 TCAGTCAACTGGGACTTAACG 57.620 47.619 10.13 0.00 45.59 3.18
325 327 2.960384 TCAGTCAACTGGGACTTAACGA 59.040 45.455 10.13 0.00 45.59 3.85
326 328 3.385433 TCAGTCAACTGGGACTTAACGAA 59.615 43.478 10.13 0.00 45.59 3.85
327 329 3.741344 CAGTCAACTGGGACTTAACGAAG 59.259 47.826 2.08 0.00 45.59 3.79
328 330 3.640029 AGTCAACTGGGACTTAACGAAGA 59.360 43.478 0.00 0.00 45.59 2.87
329 331 3.739810 GTCAACTGGGACTTAACGAAGAC 59.260 47.826 0.00 0.00 36.45 3.01
330 332 3.640029 TCAACTGGGACTTAACGAAGACT 59.360 43.478 0.00 0.00 36.45 3.24
331 333 3.938289 ACTGGGACTTAACGAAGACTC 57.062 47.619 0.00 0.00 36.45 3.36
332 334 3.228453 ACTGGGACTTAACGAAGACTCA 58.772 45.455 0.00 0.00 35.78 3.41
333 335 3.839293 CTGGGACTTAACGAAGACTCAG 58.161 50.000 3.31 3.31 45.31 3.35
334 336 3.228453 TGGGACTTAACGAAGACTCAGT 58.772 45.455 0.00 0.00 33.63 3.41
335 337 3.255149 TGGGACTTAACGAAGACTCAGTC 59.745 47.826 0.00 0.00 33.63 3.51
336 338 3.490399 GGACTTAACGAAGACTCAGTCG 58.510 50.000 0.00 0.00 42.91 4.18
337 339 3.188048 GGACTTAACGAAGACTCAGTCGA 59.812 47.826 0.00 0.00 39.64 4.20
338 340 4.396519 GACTTAACGAAGACTCAGTCGAG 58.603 47.826 0.00 0.00 39.64 4.04
348 350 1.906757 CTCAGTCGAGTGATGTCAGC 58.093 55.000 22.72 0.00 34.29 4.26
349 351 1.200948 CTCAGTCGAGTGATGTCAGCA 59.799 52.381 22.72 0.00 34.29 4.41
350 352 1.821136 TCAGTCGAGTGATGTCAGCAT 59.179 47.619 18.99 0.00 38.18 3.79
351 353 1.925185 CAGTCGAGTGATGTCAGCATG 59.075 52.381 15.40 0.00 35.07 4.06
352 354 1.547820 AGTCGAGTGATGTCAGCATGT 59.452 47.619 0.00 0.00 37.40 3.21
353 355 1.657594 GTCGAGTGATGTCAGCATGTG 59.342 52.381 0.00 0.00 37.40 3.21
354 356 1.273327 TCGAGTGATGTCAGCATGTGT 59.727 47.619 0.00 0.00 37.40 3.72
355 357 2.071540 CGAGTGATGTCAGCATGTGTT 58.928 47.619 0.00 0.00 37.40 3.32
356 358 2.481568 CGAGTGATGTCAGCATGTGTTT 59.518 45.455 0.00 0.00 37.40 2.83
357 359 3.058708 CGAGTGATGTCAGCATGTGTTTT 60.059 43.478 0.00 0.00 37.40 2.43
358 360 4.555313 CGAGTGATGTCAGCATGTGTTTTT 60.555 41.667 0.00 0.00 37.40 1.94
373 375 3.560826 TTTTTGCTACAAGCGGCAC 57.439 47.368 1.45 0.00 46.26 5.01
374 376 0.741326 TTTTTGCTACAAGCGGCACA 59.259 45.000 1.45 0.00 46.26 4.57
375 377 0.310543 TTTTGCTACAAGCGGCACAG 59.689 50.000 1.45 0.00 46.26 3.66
376 378 2.128853 TTTGCTACAAGCGGCACAGC 62.129 55.000 1.45 5.50 46.26 4.40
394 396 2.856091 GCTATATGCTACAAACGGCG 57.144 50.000 4.80 4.80 38.95 6.46
395 397 2.400399 GCTATATGCTACAAACGGCGA 58.600 47.619 16.62 0.00 38.95 5.54
396 398 2.155155 GCTATATGCTACAAACGGCGAC 59.845 50.000 16.62 0.00 38.95 5.19
397 399 2.303163 ATATGCTACAAACGGCGACA 57.697 45.000 16.62 0.00 0.00 4.35
398 400 2.081725 TATGCTACAAACGGCGACAA 57.918 45.000 16.62 0.00 0.00 3.18
399 401 1.231221 ATGCTACAAACGGCGACAAA 58.769 45.000 16.62 0.00 0.00 2.83
400 402 1.015109 TGCTACAAACGGCGACAAAA 58.985 45.000 16.62 0.00 0.00 2.44
401 403 1.003331 TGCTACAAACGGCGACAAAAG 60.003 47.619 16.62 6.42 0.00 2.27
402 404 1.262151 GCTACAAACGGCGACAAAAGA 59.738 47.619 16.62 0.00 0.00 2.52
403 405 2.095919 GCTACAAACGGCGACAAAAGAT 60.096 45.455 16.62 0.00 0.00 2.40
404 406 2.399396 ACAAACGGCGACAAAAGATG 57.601 45.000 16.62 2.80 0.00 2.90
406 408 2.098443 ACAAACGGCGACAAAAGATGTT 59.902 40.909 16.62 0.00 44.12 2.71
407 409 2.399396 AACGGCGACAAAAGATGTTG 57.601 45.000 16.62 0.00 44.12 3.33
413 415 3.454042 CGACAAAAGATGTTGCGATGA 57.546 42.857 0.00 0.00 44.12 2.92
414 416 4.007282 CGACAAAAGATGTTGCGATGAT 57.993 40.909 0.00 0.00 44.12 2.45
415 417 5.142635 CGACAAAAGATGTTGCGATGATA 57.857 39.130 0.00 0.00 44.12 2.15
416 418 5.741425 CGACAAAAGATGTTGCGATGATAT 58.259 37.500 0.00 0.00 44.12 1.63
417 419 6.194463 CGACAAAAGATGTTGCGATGATATT 58.806 36.000 0.00 0.00 44.12 1.28
418 420 6.139638 CGACAAAAGATGTTGCGATGATATTG 59.860 38.462 0.00 0.00 44.12 1.90
419 421 5.745294 ACAAAAGATGTTGCGATGATATTGC 59.255 36.000 0.00 0.00 40.06 3.56
426 428 3.069074 TGCGATGATATTGCAAGCAAC 57.931 42.857 9.97 1.38 46.24 4.17
427 429 2.223548 TGCGATGATATTGCAAGCAACC 60.224 45.455 9.97 3.50 46.24 3.77
428 430 2.223548 GCGATGATATTGCAAGCAACCA 60.224 45.455 9.97 8.89 38.88 3.67
429 431 3.365832 CGATGATATTGCAAGCAACCAC 58.634 45.455 9.97 5.03 38.88 4.16
430 432 3.181498 CGATGATATTGCAAGCAACCACA 60.181 43.478 9.97 10.19 38.88 4.17
431 433 4.674885 CGATGATATTGCAAGCAACCACAA 60.675 41.667 9.97 0.00 38.88 3.33
432 434 3.911868 TGATATTGCAAGCAACCACAAC 58.088 40.909 9.97 0.46 38.88 3.32
433 435 3.320256 TGATATTGCAAGCAACCACAACA 59.680 39.130 9.97 2.88 38.88 3.33
434 436 2.687700 ATTGCAAGCAACCACAACAA 57.312 40.000 9.97 0.00 38.88 2.83
435 437 2.462456 TTGCAAGCAACCACAACAAA 57.538 40.000 2.89 0.00 0.00 2.83
436 438 2.687700 TGCAAGCAACCACAACAAAT 57.312 40.000 0.00 0.00 0.00 2.32
437 439 3.808466 TGCAAGCAACCACAACAAATA 57.192 38.095 0.00 0.00 0.00 1.40
438 440 3.452474 TGCAAGCAACCACAACAAATAC 58.548 40.909 0.00 0.00 0.00 1.89
439 441 3.131933 TGCAAGCAACCACAACAAATACT 59.868 39.130 0.00 0.00 0.00 2.12
440 442 4.339530 TGCAAGCAACCACAACAAATACTA 59.660 37.500 0.00 0.00 0.00 1.82
441 443 4.679654 GCAAGCAACCACAACAAATACTAC 59.320 41.667 0.00 0.00 0.00 2.73
442 444 5.507315 GCAAGCAACCACAACAAATACTACT 60.507 40.000 0.00 0.00 0.00 2.57
443 445 6.293735 GCAAGCAACCACAACAAATACTACTA 60.294 38.462 0.00 0.00 0.00 1.82
444 446 6.796705 AGCAACCACAACAAATACTACTAC 57.203 37.500 0.00 0.00 0.00 2.73
445 447 6.531021 AGCAACCACAACAAATACTACTACT 58.469 36.000 0.00 0.00 0.00 2.57
446 448 6.426937 AGCAACCACAACAAATACTACTACTG 59.573 38.462 0.00 0.00 0.00 2.74
447 449 6.204108 GCAACCACAACAAATACTACTACTGT 59.796 38.462 0.00 0.00 0.00 3.55
448 450 7.255001 GCAACCACAACAAATACTACTACTGTT 60.255 37.037 0.00 0.00 0.00 3.16
449 451 7.958053 ACCACAACAAATACTACTACTGTTC 57.042 36.000 0.00 0.00 0.00 3.18
450 452 7.732996 ACCACAACAAATACTACTACTGTTCT 58.267 34.615 0.00 0.00 0.00 3.01
451 453 8.863086 ACCACAACAAATACTACTACTGTTCTA 58.137 33.333 0.00 0.00 0.00 2.10
452 454 9.701098 CCACAACAAATACTACTACTGTTCTAA 57.299 33.333 0.00 0.00 0.00 2.10
466 468 9.991906 ACTACTGTTCTAACTAAAATGCTACAA 57.008 29.630 0.00 0.00 0.00 2.41
468 470 8.095937 ACTGTTCTAACTAAAATGCTACAACC 57.904 34.615 0.00 0.00 0.00 3.77
469 471 7.095355 ACTGTTCTAACTAAAATGCTACAACCG 60.095 37.037 0.00 0.00 0.00 4.44
470 472 5.789710 TCTAACTAAAATGCTACAACCGC 57.210 39.130 0.00 0.00 0.00 5.68
471 473 5.239351 TCTAACTAAAATGCTACAACCGCA 58.761 37.500 0.00 0.00 42.25 5.69
472 474 4.839668 AACTAAAATGCTACAACCGCAA 57.160 36.364 0.00 0.00 41.26 4.85
473 475 5.385509 AACTAAAATGCTACAACCGCAAT 57.614 34.783 0.00 0.00 41.26 3.56
474 476 4.732784 ACTAAAATGCTACAACCGCAATG 58.267 39.130 0.00 0.00 41.26 2.82
475 477 3.932545 AAAATGCTACAACCGCAATGA 57.067 38.095 0.00 0.00 41.26 2.57
476 478 3.932545 AAATGCTACAACCGCAATGAA 57.067 38.095 0.00 0.00 41.26 2.57
477 479 3.492421 AATGCTACAACCGCAATGAAG 57.508 42.857 0.00 0.00 41.26 3.02
478 480 1.164411 TGCTACAACCGCAATGAAGG 58.836 50.000 0.00 0.00 33.87 3.46
479 481 1.271108 TGCTACAACCGCAATGAAGGA 60.271 47.619 2.37 0.00 33.87 3.36
480 482 2.017049 GCTACAACCGCAATGAAGGAT 58.983 47.619 2.37 0.00 0.00 3.24
481 483 2.223340 GCTACAACCGCAATGAAGGATG 60.223 50.000 2.37 3.55 36.52 3.51
482 484 1.909700 ACAACCGCAATGAAGGATGT 58.090 45.000 5.56 5.56 38.46 3.06
483 485 2.238521 ACAACCGCAATGAAGGATGTT 58.761 42.857 5.56 0.00 39.98 2.71
484 486 2.030007 ACAACCGCAATGAAGGATGTTG 60.030 45.455 5.56 0.00 39.98 3.33
485 487 0.527565 ACCGCAATGAAGGATGTTGC 59.472 50.000 2.37 0.00 43.49 4.17
486 488 0.527113 CCGCAATGAAGGATGTTGCA 59.473 50.000 9.58 0.00 46.35 4.08
487 489 1.067706 CCGCAATGAAGGATGTTGCAA 60.068 47.619 0.00 0.00 46.35 4.08
488 490 1.987770 CGCAATGAAGGATGTTGCAAC 59.012 47.619 22.83 22.83 46.35 4.17
489 491 2.340337 GCAATGAAGGATGTTGCAACC 58.660 47.619 26.14 11.75 45.57 3.77
490 492 2.598589 CAATGAAGGATGTTGCAACCG 58.401 47.619 26.14 0.00 31.34 4.44
491 493 1.176527 ATGAAGGATGTTGCAACCGG 58.823 50.000 26.14 0.00 31.34 5.28
492 494 0.179004 TGAAGGATGTTGCAACCGGT 60.179 50.000 26.14 12.60 31.34 5.28
493 495 0.240945 GAAGGATGTTGCAACCGGTG 59.759 55.000 26.14 3.35 31.34 4.94
494 496 0.179004 AAGGATGTTGCAACCGGTGA 60.179 50.000 26.14 8.09 31.34 4.02
495 497 0.606401 AGGATGTTGCAACCGGTGAG 60.606 55.000 26.14 5.17 31.34 3.51
496 498 0.605319 GGATGTTGCAACCGGTGAGA 60.605 55.000 26.14 6.55 0.00 3.27
497 499 1.453155 GATGTTGCAACCGGTGAGAT 58.547 50.000 26.14 11.33 0.00 2.75
498 500 1.131126 GATGTTGCAACCGGTGAGATG 59.869 52.381 26.14 3.06 0.00 2.90
499 501 0.107643 TGTTGCAACCGGTGAGATGA 59.892 50.000 26.14 0.76 0.00 2.92
500 502 0.517316 GTTGCAACCGGTGAGATGAC 59.483 55.000 19.15 0.00 0.00 3.06
501 503 0.948623 TTGCAACCGGTGAGATGACG 60.949 55.000 8.52 0.00 0.00 4.35
502 504 1.374252 GCAACCGGTGAGATGACGT 60.374 57.895 8.52 0.00 0.00 4.34
503 505 1.626654 GCAACCGGTGAGATGACGTG 61.627 60.000 8.52 0.00 0.00 4.49
504 506 1.374252 AACCGGTGAGATGACGTGC 60.374 57.895 8.52 0.00 0.00 5.34
505 507 1.816863 AACCGGTGAGATGACGTGCT 61.817 55.000 8.52 0.00 0.00 4.40
506 508 0.963856 ACCGGTGAGATGACGTGCTA 60.964 55.000 6.12 0.00 0.00 3.49
507 509 0.525668 CCGGTGAGATGACGTGCTAC 60.526 60.000 0.00 0.00 0.00 3.58
508 510 0.170339 CGGTGAGATGACGTGCTACA 59.830 55.000 0.00 0.00 0.00 2.74
509 511 1.402325 CGGTGAGATGACGTGCTACAA 60.402 52.381 0.00 0.00 0.00 2.41
510 512 1.993370 GGTGAGATGACGTGCTACAAC 59.007 52.381 0.00 0.00 0.00 3.32
511 513 1.993370 GTGAGATGACGTGCTACAACC 59.007 52.381 0.00 0.00 0.00 3.77
512 514 1.269166 GAGATGACGTGCTACAACCG 58.731 55.000 0.00 0.00 0.00 4.44
513 515 0.108804 AGATGACGTGCTACAACCGG 60.109 55.000 0.00 0.00 0.00 5.28
514 516 0.389426 GATGACGTGCTACAACCGGT 60.389 55.000 0.00 0.00 0.00 5.28
515 517 0.669318 ATGACGTGCTACAACCGGTG 60.669 55.000 8.52 4.99 0.00 4.94
516 518 1.007038 GACGTGCTACAACCGGTGA 60.007 57.895 8.52 0.00 0.00 4.02
517 519 1.006571 ACGTGCTACAACCGGTGAG 60.007 57.895 8.52 6.84 0.00 3.51
519 521 1.375523 GTGCTACAACCGGTGAGGG 60.376 63.158 8.52 0.22 46.96 4.30
520 522 1.534476 TGCTACAACCGGTGAGGGA 60.534 57.895 8.52 0.00 46.96 4.20
521 523 0.907704 TGCTACAACCGGTGAGGGAT 60.908 55.000 8.52 0.00 46.96 3.85
522 524 0.462047 GCTACAACCGGTGAGGGATG 60.462 60.000 8.52 3.45 46.96 3.51
523 525 0.178068 CTACAACCGGTGAGGGATGG 59.822 60.000 8.52 0.00 46.96 3.51
524 526 1.906105 TACAACCGGTGAGGGATGGC 61.906 60.000 8.52 0.00 46.96 4.40
525 527 2.933287 AACCGGTGAGGGATGGCA 60.933 61.111 8.52 0.00 46.96 4.92
526 528 2.308722 AACCGGTGAGGGATGGCAT 61.309 57.895 8.52 0.00 46.96 4.40
527 529 2.203252 CCGGTGAGGGATGGCATG 60.203 66.667 3.81 0.00 35.97 4.06
528 530 2.903855 CGGTGAGGGATGGCATGC 60.904 66.667 9.90 9.90 0.00 4.06
529 531 2.599597 GGTGAGGGATGGCATGCT 59.400 61.111 18.92 4.86 0.00 3.79
530 532 1.076485 GGTGAGGGATGGCATGCTT 60.076 57.895 18.92 11.53 0.00 3.91
531 533 1.105759 GGTGAGGGATGGCATGCTTC 61.106 60.000 21.54 21.54 0.00 3.86
532 534 0.394762 GTGAGGGATGGCATGCTTCA 60.395 55.000 25.88 25.88 34.50 3.02
533 535 0.332293 TGAGGGATGGCATGCTTCAA 59.668 50.000 27.08 13.47 33.99 2.69
534 536 0.743097 GAGGGATGGCATGCTTCAAC 59.257 55.000 22.98 6.66 0.00 3.18
535 537 0.685458 AGGGATGGCATGCTTCAACC 60.685 55.000 18.92 15.32 0.00 3.77
536 538 0.971959 GGGATGGCATGCTTCAACCA 60.972 55.000 18.92 6.05 36.43 3.67
537 539 0.896923 GGATGGCATGCTTCAACCAA 59.103 50.000 18.92 0.00 35.41 3.67
538 540 1.404583 GGATGGCATGCTTCAACCAAC 60.405 52.381 18.92 4.41 35.41 3.77
539 541 1.273048 GATGGCATGCTTCAACCAACA 59.727 47.619 18.92 3.64 35.41 3.33
540 542 1.117994 TGGCATGCTTCAACCAACAA 58.882 45.000 18.92 0.00 0.00 2.83
541 543 1.068895 TGGCATGCTTCAACCAACAAG 59.931 47.619 18.92 0.00 0.00 3.16
542 544 1.340889 GGCATGCTTCAACCAACAAGA 59.659 47.619 18.92 0.00 0.00 3.02
543 545 2.397549 GCATGCTTCAACCAACAAGAC 58.602 47.619 11.37 0.00 0.00 3.01
544 546 2.653890 CATGCTTCAACCAACAAGACG 58.346 47.619 0.00 0.00 0.00 4.18
545 547 1.021202 TGCTTCAACCAACAAGACGG 58.979 50.000 0.00 0.00 0.00 4.79
546 548 1.305201 GCTTCAACCAACAAGACGGA 58.695 50.000 0.00 0.00 0.00 4.69
547 549 1.880027 GCTTCAACCAACAAGACGGAT 59.120 47.619 0.00 0.00 0.00 4.18
548 550 2.350772 GCTTCAACCAACAAGACGGATG 60.351 50.000 0.00 0.00 0.00 3.51
549 551 2.631160 TCAACCAACAAGACGGATGT 57.369 45.000 0.00 0.00 0.00 3.06
550 552 2.925724 TCAACCAACAAGACGGATGTT 58.074 42.857 0.00 0.00 41.50 2.71
551 553 4.074627 TCAACCAACAAGACGGATGTTA 57.925 40.909 3.00 0.00 38.90 2.41
552 554 3.810941 TCAACCAACAAGACGGATGTTAC 59.189 43.478 3.00 0.00 38.90 2.50
553 555 3.478857 ACCAACAAGACGGATGTTACA 57.521 42.857 3.00 0.00 38.90 2.41
554 556 3.811083 ACCAACAAGACGGATGTTACAA 58.189 40.909 0.00 0.00 38.90 2.41
555 557 3.562557 ACCAACAAGACGGATGTTACAAC 59.437 43.478 0.00 0.00 38.90 3.32
556 558 3.058501 CCAACAAGACGGATGTTACAACC 60.059 47.826 1.24 1.24 38.90 3.77
589 591 7.897575 AAAAATGTTGCAACTAGTCACAAAA 57.102 28.000 28.61 6.27 0.00 2.44
590 592 7.897575 AAAATGTTGCAACTAGTCACAAAAA 57.102 28.000 28.61 5.74 0.00 1.94
591 593 8.491331 AAAATGTTGCAACTAGTCACAAAAAT 57.509 26.923 28.61 7.86 0.00 1.82
592 594 7.467557 AATGTTGCAACTAGTCACAAAAATG 57.532 32.000 28.61 0.00 0.00 2.32
593 595 4.803088 TGTTGCAACTAGTCACAAAAATGC 59.197 37.500 28.61 8.20 0.00 3.56
594 596 4.916983 TGCAACTAGTCACAAAAATGCT 57.083 36.364 11.89 0.00 33.87 3.79
595 597 4.609947 TGCAACTAGTCACAAAAATGCTG 58.390 39.130 11.89 0.00 33.87 4.41
596 598 3.426525 GCAACTAGTCACAAAAATGCTGC 59.573 43.478 0.00 0.00 0.00 5.25
597 599 4.609947 CAACTAGTCACAAAAATGCTGCA 58.390 39.130 4.13 4.13 0.00 4.41
598 600 5.224888 CAACTAGTCACAAAAATGCTGCAT 58.775 37.500 9.81 9.81 0.00 3.96
599 601 4.801891 ACTAGTCACAAAAATGCTGCATG 58.198 39.130 17.00 7.69 0.00 4.06
600 602 3.034721 AGTCACAAAAATGCTGCATGG 57.965 42.857 17.00 8.86 0.00 3.66
601 603 2.366266 AGTCACAAAAATGCTGCATGGT 59.634 40.909 17.00 9.49 0.00 3.55
602 604 2.733026 GTCACAAAAATGCTGCATGGTC 59.267 45.455 17.00 0.00 0.00 4.02
603 605 1.722464 CACAAAAATGCTGCATGGTCG 59.278 47.619 17.00 8.22 0.00 4.79
604 606 1.612950 ACAAAAATGCTGCATGGTCGA 59.387 42.857 17.00 0.00 0.00 4.20
605 607 1.987770 CAAAAATGCTGCATGGTCGAC 59.012 47.619 17.00 7.13 0.00 4.20
606 608 1.538047 AAAATGCTGCATGGTCGACT 58.462 45.000 17.00 0.00 0.00 4.18
607 609 2.401583 AAATGCTGCATGGTCGACTA 57.598 45.000 17.00 10.40 0.00 2.59
608 610 2.401583 AATGCTGCATGGTCGACTAA 57.598 45.000 17.00 4.64 0.00 2.24
609 611 1.945387 ATGCTGCATGGTCGACTAAG 58.055 50.000 15.44 7.75 0.00 2.18
610 612 0.894835 TGCTGCATGGTCGACTAAGA 59.105 50.000 16.46 0.00 0.00 2.10
611 613 1.281899 GCTGCATGGTCGACTAAGAC 58.718 55.000 16.46 3.94 40.25 3.01
612 614 1.134965 GCTGCATGGTCGACTAAGACT 60.135 52.381 16.46 0.00 40.76 3.24
613 615 2.675317 GCTGCATGGTCGACTAAGACTT 60.675 50.000 16.46 0.00 40.76 3.01
614 616 2.926200 CTGCATGGTCGACTAAGACTTG 59.074 50.000 16.46 5.29 40.76 3.16
615 617 2.271800 GCATGGTCGACTAAGACTTGG 58.728 52.381 16.46 0.00 40.76 3.61
616 618 2.353803 GCATGGTCGACTAAGACTTGGT 60.354 50.000 16.46 3.54 40.76 3.67
617 619 3.864921 GCATGGTCGACTAAGACTTGGTT 60.865 47.826 16.46 0.00 40.76 3.67
618 620 4.619863 GCATGGTCGACTAAGACTTGGTTA 60.620 45.833 16.46 0.00 40.76 2.85
619 621 5.475719 CATGGTCGACTAAGACTTGGTTAA 58.524 41.667 16.46 0.00 40.76 2.01
620 622 5.534207 TGGTCGACTAAGACTTGGTTAAA 57.466 39.130 16.46 0.00 40.76 1.52
621 623 6.105397 TGGTCGACTAAGACTTGGTTAAAT 57.895 37.500 16.46 0.00 40.76 1.40
622 624 6.161381 TGGTCGACTAAGACTTGGTTAAATC 58.839 40.000 16.46 0.00 40.76 2.17
623 625 6.014840 TGGTCGACTAAGACTTGGTTAAATCT 60.015 38.462 16.46 0.00 40.76 2.40
624 626 6.530887 GGTCGACTAAGACTTGGTTAAATCTC 59.469 42.308 16.46 0.00 40.76 2.75
625 627 7.088905 GTCGACTAAGACTTGGTTAAATCTCA 58.911 38.462 8.70 0.00 38.09 3.27
626 628 7.273815 GTCGACTAAGACTTGGTTAAATCTCAG 59.726 40.741 8.70 0.00 38.09 3.35
627 629 7.039923 TCGACTAAGACTTGGTTAAATCTCAGT 60.040 37.037 5.60 0.00 0.00 3.41
628 630 7.273815 CGACTAAGACTTGGTTAAATCTCAGTC 59.726 40.741 5.60 1.64 0.00 3.51
629 631 7.091443 ACTAAGACTTGGTTAAATCTCAGTCG 58.909 38.462 0.00 0.00 0.00 4.18
630 632 5.723672 AGACTTGGTTAAATCTCAGTCGA 57.276 39.130 0.00 0.00 0.00 4.20
631 633 5.471257 AGACTTGGTTAAATCTCAGTCGAC 58.529 41.667 7.70 7.70 0.00 4.20
632 634 5.244178 AGACTTGGTTAAATCTCAGTCGACT 59.756 40.000 13.58 13.58 0.00 4.18
633 635 5.230942 ACTTGGTTAAATCTCAGTCGACTG 58.769 41.667 34.76 34.76 45.08 3.51
645 647 4.590400 CAGTCGACTGATTTTTAGCAGG 57.410 45.455 36.73 7.99 46.59 4.85
646 648 3.372206 CAGTCGACTGATTTTTAGCAGGG 59.628 47.826 36.73 7.53 46.59 4.45
647 649 2.096013 GTCGACTGATTTTTAGCAGGGC 59.904 50.000 8.70 0.00 36.47 5.19
648 650 1.401905 CGACTGATTTTTAGCAGGGCC 59.598 52.381 0.00 0.00 36.47 5.80
649 651 1.401905 GACTGATTTTTAGCAGGGCCG 59.598 52.381 0.00 0.00 36.47 6.13
650 652 0.101219 CTGATTTTTAGCAGGGCCGC 59.899 55.000 11.60 11.60 0.00 6.53
651 653 0.323360 TGATTTTTAGCAGGGCCGCT 60.323 50.000 22.65 22.65 46.26 5.52
652 654 0.817654 GATTTTTAGCAGGGCCGCTT 59.182 50.000 23.84 9.17 43.56 4.68
653 655 2.021457 GATTTTTAGCAGGGCCGCTTA 58.979 47.619 23.84 14.74 43.56 3.09
654 656 1.912417 TTTTTAGCAGGGCCGCTTAA 58.088 45.000 23.84 18.95 43.56 1.85
699 701 7.682787 AAGATCAGGTAGATTGTCTGGTAAT 57.317 36.000 0.00 0.00 37.00 1.89
701 703 7.072562 AGATCAGGTAGATTGTCTGGTAATCT 58.927 38.462 0.00 0.00 44.61 2.40
759 773 5.899299 TCTATTACTCCCGTAGCAAAAGAC 58.101 41.667 0.00 0.00 0.00 3.01
818 1077 4.619227 CCCAACGTGCACCGGTCT 62.619 66.667 12.15 0.00 42.24 3.85
820 1079 2.184167 CCAACGTGCACCGGTCTTT 61.184 57.895 12.15 0.00 42.24 2.52
821 1080 1.010125 CAACGTGCACCGGTCTTTG 60.010 57.895 12.15 0.00 42.24 2.77
822 1081 1.450669 AACGTGCACCGGTCTTTGT 60.451 52.632 12.15 0.00 42.24 2.83
823 1082 1.711060 AACGTGCACCGGTCTTTGTG 61.711 55.000 12.15 0.00 42.24 3.33
824 1083 2.177580 CGTGCACCGGTCTTTGTGT 61.178 57.895 12.15 0.00 34.94 3.72
825 1084 1.355210 GTGCACCGGTCTTTGTGTG 59.645 57.895 2.59 0.00 34.94 3.82
826 1085 1.078072 TGCACCGGTCTTTGTGTGT 60.078 52.632 2.59 0.00 34.94 3.72
887 1148 3.497932 CAGAGCAGCGGCAGAAGC 61.498 66.667 12.44 0.33 44.61 3.86
914 1175 4.069232 CGAGAGGACAGCGCCCAA 62.069 66.667 2.29 0.00 0.00 4.12
940 1201 5.755861 TCAAAATTCAAAATTCGAACCACCC 59.244 36.000 0.00 0.00 0.00 4.61
1008 1271 4.838152 CCGTCCACCATCCGCCTG 62.838 72.222 0.00 0.00 0.00 4.85
1063 1329 3.151022 CCACCGGGGAGAGAGAGC 61.151 72.222 4.41 0.00 40.01 4.09
1326 1622 3.151554 TCAATCTGTTGTTGCATCTGCT 58.848 40.909 3.53 0.00 38.00 4.24
1554 1853 3.206964 CGTCTAGACTAGAGCATCACCA 58.793 50.000 20.34 0.00 37.82 4.17
1604 1918 3.066190 CGTCTCCACCCGCCACTA 61.066 66.667 0.00 0.00 0.00 2.74
1618 1932 2.725644 CACTACTCGTGGTTCTGCG 58.274 57.895 0.00 0.00 40.02 5.18
1643 1957 1.466558 GCTTCTTCTGTAGCCTTGTGC 59.533 52.381 0.00 0.00 41.71 4.57
1656 1970 1.338579 CCTTGTGCCCTCTTCAGTCTC 60.339 57.143 0.00 0.00 0.00 3.36
1687 2005 5.180868 GTCTTCAGTCTTCCTCTGTACGTTA 59.819 44.000 0.00 0.00 34.86 3.18
1709 2048 1.278172 CGATGCCGTGTGATCCGATC 61.278 60.000 1.01 1.01 0.00 3.69
1726 2065 3.547868 CCGATCCGATGCTGTATTAATCG 59.452 47.826 0.00 9.59 42.14 3.34
1727 2066 3.000674 CGATCCGATGCTGTATTAATCGC 60.001 47.826 0.00 0.00 41.37 4.58
1728 2067 2.683968 TCCGATGCTGTATTAATCGCC 58.316 47.619 0.00 0.00 41.37 5.54
1729 2068 1.390123 CCGATGCTGTATTAATCGCCG 59.610 52.381 0.00 0.00 41.37 6.46
1730 2069 2.058798 CGATGCTGTATTAATCGCCGT 58.941 47.619 0.00 0.00 37.06 5.68
1731 2070 3.239254 CGATGCTGTATTAATCGCCGTA 58.761 45.455 0.00 0.00 37.06 4.02
1732 2071 3.857665 CGATGCTGTATTAATCGCCGTAT 59.142 43.478 0.00 0.00 37.06 3.06
1733 2072 4.326278 CGATGCTGTATTAATCGCCGTATT 59.674 41.667 0.00 0.00 37.06 1.89
1734 2073 5.513849 CGATGCTGTATTAATCGCCGTATTA 59.486 40.000 0.00 0.00 37.06 0.98
1735 2074 6.034150 CGATGCTGTATTAATCGCCGTATTAA 59.966 38.462 0.00 4.88 37.06 1.40
1736 2075 7.253983 CGATGCTGTATTAATCGCCGTATTAAT 60.254 37.037 14.41 14.41 42.15 1.40
1737 2076 7.285783 TGCTGTATTAATCGCCGTATTAATC 57.714 36.000 13.79 9.17 39.89 1.75
1749 2088 6.207221 TCGCCGTATTAATCTCAGTATAACCA 59.793 38.462 0.00 0.00 0.00 3.67
1760 2099 4.136796 TCAGTATAACCATTGCTGCATCC 58.863 43.478 1.84 0.00 0.00 3.51
1782 3295 4.034048 CCGGTGTGTTGCAAATCTATCTAC 59.966 45.833 0.00 0.00 0.00 2.59
1787 3300 6.316140 GTGTGTTGCAAATCTATCTACATCCA 59.684 38.462 0.00 0.00 0.00 3.41
1836 3701 1.092921 GTTGGGAATGCACGCGGATA 61.093 55.000 12.47 0.00 0.00 2.59
1900 3770 2.561733 TCCAATACGAACGCTCTCAG 57.438 50.000 0.00 0.00 0.00 3.35
1944 3814 6.299023 CAGTTTTCTGCTACACACAATACA 57.701 37.500 0.00 0.00 41.24 2.29
1952 3822 6.593770 TCTGCTACACACAATACAATCGAATT 59.406 34.615 0.00 0.00 0.00 2.17
1986 3856 7.132317 TGAAATTATCAATGCCTGTGCAGGG 62.132 44.000 18.73 3.50 41.68 4.45
2015 3885 2.529632 AGGATTTGGGGTGAAGCTTTC 58.470 47.619 0.00 0.00 0.00 2.62
2065 3935 5.096521 TGGCTGGGATGATAGATTGATAGT 58.903 41.667 0.00 0.00 0.00 2.12
2081 3951 9.376075 AGATTGATAGTATCGGCTGAATTTATG 57.624 33.333 0.00 0.00 0.00 1.90
2086 3956 3.976793 ATCGGCTGAATTTATGCACTG 57.023 42.857 0.00 0.00 0.00 3.66
2091 3961 3.419915 GCTGAATTTATGCACTGTGTCG 58.580 45.455 9.86 0.00 0.00 4.35
2109 3979 3.118702 TGTCGGTGAAACAAGTGAGGTAA 60.119 43.478 0.00 0.00 39.98 2.85
2111 3981 2.546789 CGGTGAAACAAGTGAGGTAACC 59.453 50.000 0.00 0.00 39.98 2.85
2112 3982 3.743269 CGGTGAAACAAGTGAGGTAACCT 60.743 47.826 0.00 0.00 39.98 3.50
2113 3983 3.564225 GGTGAAACAAGTGAGGTAACCTG 59.436 47.826 0.00 0.00 39.98 4.00
2230 4104 9.887406 GTAACCATATTACCAATTCAATAACCG 57.113 33.333 0.00 0.00 0.00 4.44
2231 4105 8.528044 AACCATATTACCAATTCAATAACCGT 57.472 30.769 0.00 0.00 0.00 4.83
2232 4106 9.629878 AACCATATTACCAATTCAATAACCGTA 57.370 29.630 0.00 0.00 0.00 4.02
2233 4107 9.802039 ACCATATTACCAATTCAATAACCGTAT 57.198 29.630 0.00 0.00 0.00 3.06
2236 4110 6.945938 TTACCAATTCAATAACCGTATGGG 57.054 37.500 5.82 0.00 40.75 4.00
2237 4111 5.118729 ACCAATTCAATAACCGTATGGGA 57.881 39.130 5.82 0.00 40.75 4.37
2238 4112 4.885325 ACCAATTCAATAACCGTATGGGAC 59.115 41.667 5.82 0.00 40.75 4.46
2252 4126 2.666272 TGGGACATGTGGTTAGCAAA 57.334 45.000 1.15 0.00 0.00 3.68
2253 4127 2.950781 TGGGACATGTGGTTAGCAAAA 58.049 42.857 1.15 0.00 0.00 2.44
2254 4128 3.505386 TGGGACATGTGGTTAGCAAAAT 58.495 40.909 1.15 0.00 0.00 1.82
2255 4129 3.509575 TGGGACATGTGGTTAGCAAAATC 59.490 43.478 1.15 0.00 0.00 2.17
2256 4130 3.509575 GGGACATGTGGTTAGCAAAATCA 59.490 43.478 1.15 0.00 0.00 2.57
2257 4131 4.380867 GGGACATGTGGTTAGCAAAATCAG 60.381 45.833 1.15 0.00 0.00 2.90
2258 4132 4.458989 GGACATGTGGTTAGCAAAATCAGA 59.541 41.667 1.15 0.00 0.00 3.27
2259 4133 5.048083 GGACATGTGGTTAGCAAAATCAGAA 60.048 40.000 1.15 0.00 0.00 3.02
2260 4134 6.350445 GGACATGTGGTTAGCAAAATCAGAAT 60.350 38.462 1.15 0.00 0.00 2.40
2261 4135 6.996509 ACATGTGGTTAGCAAAATCAGAATT 58.003 32.000 0.00 0.00 0.00 2.17
2262 4136 7.092716 ACATGTGGTTAGCAAAATCAGAATTC 58.907 34.615 0.00 0.00 0.00 2.17
2263 4137 6.647334 TGTGGTTAGCAAAATCAGAATTCA 57.353 33.333 8.44 0.00 0.00 2.57
2264 4138 7.230849 TGTGGTTAGCAAAATCAGAATTCAT 57.769 32.000 8.44 0.00 0.00 2.57
2265 4139 8.347004 TGTGGTTAGCAAAATCAGAATTCATA 57.653 30.769 8.44 0.00 0.00 2.15
2266 4140 8.970020 TGTGGTTAGCAAAATCAGAATTCATAT 58.030 29.630 8.44 0.00 0.00 1.78
2349 4225 4.212143 AGAGCTCATGTAGATTGCAACA 57.788 40.909 17.77 0.00 0.00 3.33
2393 4269 4.709397 AGATCTCAGTTTCGTCCTTCATCT 59.291 41.667 0.00 0.00 0.00 2.90
2440 4316 4.339429 CACCAGAACACAAAGTTACAACG 58.661 43.478 0.00 0.00 41.51 4.10
2492 4369 4.205996 TGAACGTGAAAAATTGCACATTCG 59.794 37.500 8.16 0.00 39.33 3.34
2527 4404 9.154847 ACATCACCAAAGAAAAGAAAAGAAAAG 57.845 29.630 0.00 0.00 0.00 2.27
2528 4405 9.369904 CATCACCAAAGAAAAGAAAAGAAAAGA 57.630 29.630 0.00 0.00 0.00 2.52
2529 4406 9.942850 ATCACCAAAGAAAAGAAAAGAAAAGAA 57.057 25.926 0.00 0.00 0.00 2.52
2530 4407 9.771534 TCACCAAAGAAAAGAAAAGAAAAGAAA 57.228 25.926 0.00 0.00 0.00 2.52
2545 4422 6.062095 AGAAAAGAAAAATCCACTTCTCCGA 58.938 36.000 0.00 0.00 30.57 4.55
2738 4615 5.001237 TCGTTACAATAGATTTCGCTGGA 57.999 39.130 0.00 0.00 0.00 3.86
2741 4618 3.266510 ACAATAGATTTCGCTGGAGCA 57.733 42.857 0.00 0.00 42.21 4.26
2792 4669 3.608506 CGTCTCTGATAACGTTTGTGGAG 59.391 47.826 5.91 10.01 34.30 3.86
2798 4675 4.710324 TGATAACGTTTGTGGAGGACTTT 58.290 39.130 5.91 0.00 0.00 2.66
2801 4678 0.951558 CGTTTGTGGAGGACTTTGGG 59.048 55.000 0.00 0.00 0.00 4.12
2807 4684 3.189606 TGTGGAGGACTTTGGGTCATAT 58.810 45.455 0.00 0.00 46.16 1.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.952347 AAGTCTGAAAGGACCGGTATAAT 57.048 39.130 7.34 0.00 36.95 1.28
1 2 5.750352 AAAGTCTGAAAGGACCGGTATAA 57.250 39.130 7.34 0.00 36.95 0.98
2 3 5.750352 AAAAGTCTGAAAGGACCGGTATA 57.250 39.130 7.34 0.00 36.95 1.47
3 4 4.635699 AAAAGTCTGAAAGGACCGGTAT 57.364 40.909 7.34 0.00 36.95 2.73
4 5 4.426736 AAAAAGTCTGAAAGGACCGGTA 57.573 40.909 7.34 0.00 36.95 4.02
5 6 3.292492 AAAAAGTCTGAAAGGACCGGT 57.708 42.857 6.92 6.92 36.95 5.28
6 7 5.959618 ATTAAAAAGTCTGAAAGGACCGG 57.040 39.130 0.00 0.00 36.95 5.28
7 8 6.966021 TCAATTAAAAAGTCTGAAAGGACCG 58.034 36.000 0.00 0.00 36.95 4.79
8 9 8.360390 ACATCAATTAAAAAGTCTGAAAGGACC 58.640 33.333 0.00 0.00 36.95 4.46
9 10 9.750125 AACATCAATTAAAAAGTCTGAAAGGAC 57.250 29.630 0.00 0.00 36.56 3.85
67 68 7.744715 CGGCTAAAATATTCCTAAACGCTTATG 59.255 37.037 0.00 0.00 0.00 1.90
68 69 7.572539 GCGGCTAAAATATTCCTAAACGCTTAT 60.573 37.037 12.85 0.00 39.12 1.73
95 96 4.499696 CGCATTCATTTTTCCCCCTATGAC 60.500 45.833 0.00 0.00 0.00 3.06
103 104 4.168760 CAACTCTCGCATTCATTTTTCCC 58.831 43.478 0.00 0.00 0.00 3.97
104 105 4.618489 CACAACTCTCGCATTCATTTTTCC 59.382 41.667 0.00 0.00 0.00 3.13
105 106 4.618489 CCACAACTCTCGCATTCATTTTTC 59.382 41.667 0.00 0.00 0.00 2.29
115 116 2.143122 GAATTCACCACAACTCTCGCA 58.857 47.619 0.00 0.00 0.00 5.10
117 118 1.726791 CCGAATTCACCACAACTCTCG 59.273 52.381 6.22 0.00 0.00 4.04
152 154 9.394477 CTAAAATAATAATTAAAGGGAGCGTGC 57.606 33.333 0.00 0.00 0.00 5.34
177 179 9.098355 GTTCAAATTAAAGGAAGCAAAAACTCT 57.902 29.630 0.00 0.00 0.00 3.24
180 182 9.489393 CAAGTTCAAATTAAAGGAAGCAAAAAC 57.511 29.630 0.00 0.00 0.00 2.43
194 196 5.184864 CACCATGGTAGGCAAGTTCAAATTA 59.815 40.000 19.28 0.00 0.00 1.40
211 213 5.467035 ACAAAGGACAATAAACACCATGG 57.533 39.130 11.19 11.19 0.00 3.66
231 233 1.269361 TGTCGAAGCTAAGCACGAACA 60.269 47.619 0.00 0.00 39.83 3.18
242 244 1.938577 CTGCATAGCAATGTCGAAGCT 59.061 47.619 7.83 7.83 38.41 3.74
281 283 8.197592 TGAGTTCTAGACACACCCTTAATTAA 57.802 34.615 0.00 0.00 0.00 1.40
282 284 7.453752 ACTGAGTTCTAGACACACCCTTAATTA 59.546 37.037 0.00 0.00 0.00 1.40
283 285 6.270231 ACTGAGTTCTAGACACACCCTTAATT 59.730 38.462 0.00 0.00 0.00 1.40
284 286 5.780793 ACTGAGTTCTAGACACACCCTTAAT 59.219 40.000 0.00 0.00 0.00 1.40
285 287 5.145564 ACTGAGTTCTAGACACACCCTTAA 58.854 41.667 0.00 0.00 0.00 1.85
286 288 4.737578 ACTGAGTTCTAGACACACCCTTA 58.262 43.478 0.00 0.00 0.00 2.69
287 289 3.574826 GACTGAGTTCTAGACACACCCTT 59.425 47.826 0.00 0.00 0.00 3.95
288 290 3.158676 GACTGAGTTCTAGACACACCCT 58.841 50.000 0.00 0.00 0.00 4.34
289 291 2.891580 TGACTGAGTTCTAGACACACCC 59.108 50.000 0.00 0.00 0.00 4.61
290 292 4.038162 AGTTGACTGAGTTCTAGACACACC 59.962 45.833 0.00 0.00 0.00 4.16
291 293 4.979197 CAGTTGACTGAGTTCTAGACACAC 59.021 45.833 5.19 0.00 46.59 3.82
292 294 4.038042 CCAGTTGACTGAGTTCTAGACACA 59.962 45.833 12.54 0.00 46.59 3.72
293 295 4.551388 CCAGTTGACTGAGTTCTAGACAC 58.449 47.826 12.54 0.00 46.59 3.67
294 296 3.574396 CCCAGTTGACTGAGTTCTAGACA 59.426 47.826 12.54 0.00 46.59 3.41
295 297 3.827302 TCCCAGTTGACTGAGTTCTAGAC 59.173 47.826 12.54 0.00 46.59 2.59
296 298 3.827302 GTCCCAGTTGACTGAGTTCTAGA 59.173 47.826 12.54 0.00 46.59 2.43
297 299 3.829601 AGTCCCAGTTGACTGAGTTCTAG 59.170 47.826 12.54 0.00 46.59 2.43
298 300 3.845860 AGTCCCAGTTGACTGAGTTCTA 58.154 45.455 12.54 0.00 46.59 2.10
299 301 2.683768 AGTCCCAGTTGACTGAGTTCT 58.316 47.619 12.54 3.29 46.59 3.01
300 302 3.477210 AAGTCCCAGTTGACTGAGTTC 57.523 47.619 12.54 1.27 44.68 3.01
301 303 4.704965 GTTAAGTCCCAGTTGACTGAGTT 58.295 43.478 12.54 5.63 44.68 3.01
302 304 3.243771 CGTTAAGTCCCAGTTGACTGAGT 60.244 47.826 12.54 0.00 44.68 3.41
303 305 3.005472 TCGTTAAGTCCCAGTTGACTGAG 59.995 47.826 12.54 0.00 44.68 3.35
304 306 2.960384 TCGTTAAGTCCCAGTTGACTGA 59.040 45.455 12.54 0.00 44.68 3.41
305 307 3.380479 TCGTTAAGTCCCAGTTGACTG 57.620 47.619 4.15 4.15 44.68 3.51
307 309 3.739810 GTCTTCGTTAAGTCCCAGTTGAC 59.260 47.826 0.00 0.00 34.13 3.18
308 310 3.640029 AGTCTTCGTTAAGTCCCAGTTGA 59.360 43.478 0.00 0.00 34.13 3.18
309 311 3.988517 GAGTCTTCGTTAAGTCCCAGTTG 59.011 47.826 0.00 0.00 34.13 3.16
310 312 3.640029 TGAGTCTTCGTTAAGTCCCAGTT 59.360 43.478 0.00 0.00 34.13 3.16
311 313 3.228453 TGAGTCTTCGTTAAGTCCCAGT 58.772 45.455 0.00 0.00 34.13 4.00
312 314 3.256136 ACTGAGTCTTCGTTAAGTCCCAG 59.744 47.826 0.00 0.00 34.13 4.45
313 315 3.228453 ACTGAGTCTTCGTTAAGTCCCA 58.772 45.455 0.00 0.00 34.13 4.37
314 316 3.670091 CGACTGAGTCTTCGTTAAGTCCC 60.670 52.174 11.26 0.00 34.13 4.46
315 317 3.188048 TCGACTGAGTCTTCGTTAAGTCC 59.812 47.826 11.26 0.00 36.60 3.85
316 318 4.396519 CTCGACTGAGTCTTCGTTAAGTC 58.603 47.826 11.26 4.97 37.46 3.01
317 319 4.407496 CTCGACTGAGTCTTCGTTAAGT 57.593 45.455 11.26 0.00 37.46 2.24
328 330 6.686942 CATGCTGACATCACTCGACTGAGT 62.687 50.000 1.32 0.00 45.37 3.41
329 331 4.278004 CATGCTGACATCACTCGACTGAG 61.278 52.174 1.32 0.00 40.55 3.35
330 332 1.247567 TGCTGACATCACTCGACTGA 58.752 50.000 0.00 0.00 0.00 3.41
331 333 1.925185 CATGCTGACATCACTCGACTG 59.075 52.381 0.00 0.00 32.87 3.51
332 334 1.547820 ACATGCTGACATCACTCGACT 59.452 47.619 0.00 0.00 32.87 4.18
333 335 1.657594 CACATGCTGACATCACTCGAC 59.342 52.381 0.00 0.00 32.87 4.20
334 336 1.273327 ACACATGCTGACATCACTCGA 59.727 47.619 0.00 0.00 32.87 4.04
335 337 1.718396 ACACATGCTGACATCACTCG 58.282 50.000 0.00 0.00 32.87 4.18
336 338 4.494350 AAAACACATGCTGACATCACTC 57.506 40.909 0.00 0.00 32.87 3.51
337 339 4.924305 AAAAACACATGCTGACATCACT 57.076 36.364 0.00 0.00 32.87 3.41
355 357 0.741326 TGTGCCGCTTGTAGCAAAAA 59.259 45.000 0.00 0.00 42.58 1.94
356 358 0.310543 CTGTGCCGCTTGTAGCAAAA 59.689 50.000 0.00 0.00 42.58 2.44
357 359 1.948508 CTGTGCCGCTTGTAGCAAA 59.051 52.632 0.00 0.00 42.58 3.68
358 360 2.616330 GCTGTGCCGCTTGTAGCAA 61.616 57.895 0.00 0.00 42.58 3.91
359 361 2.166130 TAGCTGTGCCGCTTGTAGCA 62.166 55.000 0.00 0.00 42.58 3.49
360 362 0.811616 ATAGCTGTGCCGCTTGTAGC 60.812 55.000 0.00 0.00 41.30 3.58
361 363 2.509052 TATAGCTGTGCCGCTTGTAG 57.491 50.000 0.00 0.00 41.30 2.74
362 364 2.754472 CATATAGCTGTGCCGCTTGTA 58.246 47.619 0.00 0.00 41.30 2.41
363 365 1.586422 CATATAGCTGTGCCGCTTGT 58.414 50.000 0.00 0.00 41.30 3.16
364 366 0.236711 GCATATAGCTGTGCCGCTTG 59.763 55.000 0.00 0.00 41.30 4.01
365 367 2.621763 GCATATAGCTGTGCCGCTT 58.378 52.632 0.00 0.00 41.30 4.68
366 368 4.368391 GCATATAGCTGTGCCGCT 57.632 55.556 0.00 0.00 43.83 5.52
375 377 2.155155 GTCGCCGTTTGTAGCATATAGC 59.845 50.000 0.00 0.00 46.19 2.97
376 378 3.377439 TGTCGCCGTTTGTAGCATATAG 58.623 45.455 0.00 0.00 0.00 1.31
377 379 3.439895 TGTCGCCGTTTGTAGCATATA 57.560 42.857 0.00 0.00 0.00 0.86
378 380 2.303163 TGTCGCCGTTTGTAGCATAT 57.697 45.000 0.00 0.00 0.00 1.78
379 381 2.081725 TTGTCGCCGTTTGTAGCATA 57.918 45.000 0.00 0.00 0.00 3.14
380 382 1.231221 TTTGTCGCCGTTTGTAGCAT 58.769 45.000 0.00 0.00 0.00 3.79
381 383 1.003331 CTTTTGTCGCCGTTTGTAGCA 60.003 47.619 0.00 0.00 0.00 3.49
382 384 1.262151 TCTTTTGTCGCCGTTTGTAGC 59.738 47.619 0.00 0.00 0.00 3.58
383 385 3.059188 ACATCTTTTGTCGCCGTTTGTAG 60.059 43.478 0.00 0.00 30.89 2.74
384 386 2.873472 ACATCTTTTGTCGCCGTTTGTA 59.127 40.909 0.00 0.00 30.89 2.41
385 387 1.673920 ACATCTTTTGTCGCCGTTTGT 59.326 42.857 0.00 0.00 30.89 2.83
386 388 2.399396 ACATCTTTTGTCGCCGTTTG 57.601 45.000 0.00 0.00 30.89 2.93
387 389 2.726633 CAACATCTTTTGTCGCCGTTT 58.273 42.857 0.00 0.00 37.68 3.60
388 390 1.599419 GCAACATCTTTTGTCGCCGTT 60.599 47.619 0.00 0.00 37.68 4.44
389 391 0.040425 GCAACATCTTTTGTCGCCGT 60.040 50.000 0.00 0.00 37.68 5.68
390 392 1.059657 CGCAACATCTTTTGTCGCCG 61.060 55.000 0.00 0.00 34.64 6.46
391 393 0.237235 TCGCAACATCTTTTGTCGCC 59.763 50.000 0.00 0.00 34.64 5.54
392 394 1.906966 CATCGCAACATCTTTTGTCGC 59.093 47.619 0.00 0.00 37.68 5.19
393 395 3.454042 TCATCGCAACATCTTTTGTCG 57.546 42.857 0.00 0.00 37.68 4.35
394 396 6.075205 GCAATATCATCGCAACATCTTTTGTC 60.075 38.462 0.00 0.00 37.68 3.18
395 397 5.745294 GCAATATCATCGCAACATCTTTTGT 59.255 36.000 0.00 0.00 41.53 2.83
396 398 5.744819 TGCAATATCATCGCAACATCTTTTG 59.255 36.000 0.00 0.00 31.46 2.44
397 399 5.893687 TGCAATATCATCGCAACATCTTTT 58.106 33.333 0.00 0.00 31.46 2.27
398 400 5.503662 TGCAATATCATCGCAACATCTTT 57.496 34.783 0.00 0.00 31.46 2.52
399 401 5.503662 TTGCAATATCATCGCAACATCTT 57.496 34.783 0.00 0.00 40.54 2.40
400 402 4.556104 GCTTGCAATATCATCGCAACATCT 60.556 41.667 0.00 0.00 40.54 2.90
401 403 3.667261 GCTTGCAATATCATCGCAACATC 59.333 43.478 0.00 0.00 40.54 3.06
402 404 3.067040 TGCTTGCAATATCATCGCAACAT 59.933 39.130 0.00 0.00 40.54 2.71
403 405 2.422832 TGCTTGCAATATCATCGCAACA 59.577 40.909 0.00 0.00 40.54 3.33
404 406 3.069074 TGCTTGCAATATCATCGCAAC 57.931 42.857 0.00 0.00 40.54 4.17
405 407 3.437428 GTTGCTTGCAATATCATCGCAA 58.563 40.909 13.94 13.94 43.02 4.85
406 408 2.223548 GGTTGCTTGCAATATCATCGCA 60.224 45.455 11.32 0.63 0.00 5.10
407 409 2.223548 TGGTTGCTTGCAATATCATCGC 60.224 45.455 11.32 0.00 0.00 4.58
408 410 3.181498 TGTGGTTGCTTGCAATATCATCG 60.181 43.478 11.32 0.00 0.00 3.84
409 411 4.374843 TGTGGTTGCTTGCAATATCATC 57.625 40.909 11.32 0.00 0.00 2.92
410 412 4.021280 TGTTGTGGTTGCTTGCAATATCAT 60.021 37.500 11.32 0.00 0.00 2.45
411 413 3.320256 TGTTGTGGTTGCTTGCAATATCA 59.680 39.130 11.32 7.83 0.00 2.15
412 414 3.911868 TGTTGTGGTTGCTTGCAATATC 58.088 40.909 11.32 5.56 0.00 1.63
413 415 4.333913 TTGTTGTGGTTGCTTGCAATAT 57.666 36.364 11.32 0.00 0.00 1.28
414 416 3.808466 TTGTTGTGGTTGCTTGCAATA 57.192 38.095 11.32 1.69 0.00 1.90
415 417 2.687700 TTGTTGTGGTTGCTTGCAAT 57.312 40.000 11.32 0.00 0.00 3.56
416 418 2.462456 TTTGTTGTGGTTGCTTGCAA 57.538 40.000 3.70 3.70 0.00 4.08
417 419 2.687700 ATTTGTTGTGGTTGCTTGCA 57.312 40.000 0.00 0.00 0.00 4.08
418 420 3.716601 AGTATTTGTTGTGGTTGCTTGC 58.283 40.909 0.00 0.00 0.00 4.01
419 421 6.072112 AGTAGTATTTGTTGTGGTTGCTTG 57.928 37.500 0.00 0.00 0.00 4.01
420 422 6.996282 AGTAGTAGTATTTGTTGTGGTTGCTT 59.004 34.615 0.00 0.00 0.00 3.91
421 423 6.426937 CAGTAGTAGTATTTGTTGTGGTTGCT 59.573 38.462 0.00 0.00 0.00 3.91
422 424 6.204108 ACAGTAGTAGTATTTGTTGTGGTTGC 59.796 38.462 0.00 0.00 0.00 4.17
423 425 7.724305 ACAGTAGTAGTATTTGTTGTGGTTG 57.276 36.000 0.00 0.00 0.00 3.77
424 426 8.208903 AGAACAGTAGTAGTATTTGTTGTGGTT 58.791 33.333 12.51 0.00 32.58 3.67
425 427 7.732996 AGAACAGTAGTAGTATTTGTTGTGGT 58.267 34.615 12.51 0.00 32.58 4.16
426 428 9.701098 TTAGAACAGTAGTAGTATTTGTTGTGG 57.299 33.333 12.51 0.00 32.58 4.17
440 442 9.991906 TTGTAGCATTTTAGTTAGAACAGTAGT 57.008 29.630 0.00 0.00 0.00 2.73
442 444 9.211485 GGTTGTAGCATTTTAGTTAGAACAGTA 57.789 33.333 0.00 0.00 32.57 2.74
443 445 7.095355 CGGTTGTAGCATTTTAGTTAGAACAGT 60.095 37.037 0.00 0.00 32.57 3.55
444 446 7.234384 CGGTTGTAGCATTTTAGTTAGAACAG 58.766 38.462 0.00 0.00 32.57 3.16
445 447 6.347888 GCGGTTGTAGCATTTTAGTTAGAACA 60.348 38.462 0.00 0.00 32.57 3.18
446 448 6.019762 GCGGTTGTAGCATTTTAGTTAGAAC 58.980 40.000 0.00 0.00 30.96 3.01
447 449 5.701750 TGCGGTTGTAGCATTTTAGTTAGAA 59.298 36.000 0.00 0.00 40.01 2.10
448 450 5.239351 TGCGGTTGTAGCATTTTAGTTAGA 58.761 37.500 0.00 0.00 40.01 2.10
449 451 5.539582 TGCGGTTGTAGCATTTTAGTTAG 57.460 39.130 0.00 0.00 40.01 2.34
450 452 5.943706 TTGCGGTTGTAGCATTTTAGTTA 57.056 34.783 0.00 0.00 44.74 2.24
451 453 4.839668 TTGCGGTTGTAGCATTTTAGTT 57.160 36.364 0.00 0.00 44.74 2.24
452 454 4.457603 TCATTGCGGTTGTAGCATTTTAGT 59.542 37.500 0.00 0.00 44.74 2.24
453 455 4.980590 TCATTGCGGTTGTAGCATTTTAG 58.019 39.130 0.00 0.00 44.74 1.85
454 456 5.378292 TTCATTGCGGTTGTAGCATTTTA 57.622 34.783 0.00 0.00 44.74 1.52
455 457 3.932545 TCATTGCGGTTGTAGCATTTT 57.067 38.095 0.00 0.00 44.74 1.82
456 458 3.367292 CCTTCATTGCGGTTGTAGCATTT 60.367 43.478 0.00 0.00 44.74 2.32
457 459 2.164219 CCTTCATTGCGGTTGTAGCATT 59.836 45.455 0.00 0.00 44.74 3.56
458 460 1.745087 CCTTCATTGCGGTTGTAGCAT 59.255 47.619 0.00 0.00 44.74 3.79
459 461 1.164411 CCTTCATTGCGGTTGTAGCA 58.836 50.000 0.00 0.00 43.59 3.49
460 462 1.448985 TCCTTCATTGCGGTTGTAGC 58.551 50.000 0.00 0.00 0.00 3.58
461 463 3.009723 ACATCCTTCATTGCGGTTGTAG 58.990 45.455 6.70 0.00 32.87 2.74
462 464 3.066291 ACATCCTTCATTGCGGTTGTA 57.934 42.857 6.70 0.00 32.87 2.41
463 465 1.909700 ACATCCTTCATTGCGGTTGT 58.090 45.000 0.00 3.92 0.00 3.32
464 466 2.598589 CAACATCCTTCATTGCGGTTG 58.401 47.619 0.00 0.00 0.00 3.77
465 467 1.067635 GCAACATCCTTCATTGCGGTT 60.068 47.619 0.00 0.00 39.36 4.44
466 468 0.527565 GCAACATCCTTCATTGCGGT 59.472 50.000 0.00 0.00 39.36 5.68
467 469 3.334078 GCAACATCCTTCATTGCGG 57.666 52.632 0.00 0.00 39.36 5.69
470 472 2.598589 CGGTTGCAACATCCTTCATTG 58.401 47.619 29.55 3.59 0.00 2.82
471 473 1.545582 CCGGTTGCAACATCCTTCATT 59.454 47.619 29.55 0.00 0.00 2.57
472 474 1.176527 CCGGTTGCAACATCCTTCAT 58.823 50.000 29.55 0.00 0.00 2.57
473 475 0.179004 ACCGGTTGCAACATCCTTCA 60.179 50.000 29.55 0.00 0.00 3.02
474 476 0.240945 CACCGGTTGCAACATCCTTC 59.759 55.000 29.55 11.15 0.00 3.46
475 477 0.179004 TCACCGGTTGCAACATCCTT 60.179 50.000 29.55 7.20 0.00 3.36
476 478 0.606401 CTCACCGGTTGCAACATCCT 60.606 55.000 29.55 7.15 0.00 3.24
477 479 0.605319 TCTCACCGGTTGCAACATCC 60.605 55.000 29.55 12.94 0.00 3.51
478 480 1.131126 CATCTCACCGGTTGCAACATC 59.869 52.381 29.55 13.31 0.00 3.06
479 481 1.167851 CATCTCACCGGTTGCAACAT 58.832 50.000 29.55 12.71 0.00 2.71
480 482 0.107643 TCATCTCACCGGTTGCAACA 59.892 50.000 29.55 8.91 0.00 3.33
481 483 0.517316 GTCATCTCACCGGTTGCAAC 59.483 55.000 21.59 21.59 0.00 4.17
482 484 0.948623 CGTCATCTCACCGGTTGCAA 60.949 55.000 2.97 0.00 0.00 4.08
483 485 1.374125 CGTCATCTCACCGGTTGCA 60.374 57.895 2.97 0.00 0.00 4.08
484 486 1.374252 ACGTCATCTCACCGGTTGC 60.374 57.895 2.97 0.00 0.00 4.17
485 487 1.626654 GCACGTCATCTCACCGGTTG 61.627 60.000 2.97 0.00 0.00 3.77
486 488 1.374252 GCACGTCATCTCACCGGTT 60.374 57.895 2.97 0.00 0.00 4.44
487 489 0.963856 TAGCACGTCATCTCACCGGT 60.964 55.000 0.00 0.00 0.00 5.28
488 490 0.525668 GTAGCACGTCATCTCACCGG 60.526 60.000 0.00 0.00 0.00 5.28
489 491 0.170339 TGTAGCACGTCATCTCACCG 59.830 55.000 0.00 0.00 0.00 4.94
490 492 1.993370 GTTGTAGCACGTCATCTCACC 59.007 52.381 0.00 0.00 0.00 4.02
491 493 1.993370 GGTTGTAGCACGTCATCTCAC 59.007 52.381 0.00 0.00 0.00 3.51
492 494 1.402325 CGGTTGTAGCACGTCATCTCA 60.402 52.381 0.00 0.00 0.00 3.27
493 495 1.269166 CGGTTGTAGCACGTCATCTC 58.731 55.000 0.00 0.00 0.00 2.75
494 496 0.108804 CCGGTTGTAGCACGTCATCT 60.109 55.000 0.00 0.00 0.00 2.90
495 497 0.389426 ACCGGTTGTAGCACGTCATC 60.389 55.000 0.00 0.00 0.00 2.92
496 498 0.669318 CACCGGTTGTAGCACGTCAT 60.669 55.000 2.97 0.00 0.00 3.06
497 499 1.300311 CACCGGTTGTAGCACGTCA 60.300 57.895 2.97 0.00 0.00 4.35
498 500 1.007038 TCACCGGTTGTAGCACGTC 60.007 57.895 2.97 0.00 0.00 4.34
499 501 1.006571 CTCACCGGTTGTAGCACGT 60.007 57.895 2.97 0.00 0.00 4.49
500 502 1.736645 CCTCACCGGTTGTAGCACG 60.737 63.158 2.97 0.00 0.00 5.34
501 503 1.375523 CCCTCACCGGTTGTAGCAC 60.376 63.158 2.97 0.00 0.00 4.40
502 504 0.907704 ATCCCTCACCGGTTGTAGCA 60.908 55.000 2.97 0.00 0.00 3.49
503 505 0.462047 CATCCCTCACCGGTTGTAGC 60.462 60.000 2.97 0.00 0.00 3.58
504 506 0.178068 CCATCCCTCACCGGTTGTAG 59.822 60.000 2.97 2.35 0.00 2.74
505 507 1.906105 GCCATCCCTCACCGGTTGTA 61.906 60.000 2.97 0.00 0.00 2.41
506 508 3.077907 CCATCCCTCACCGGTTGT 58.922 61.111 2.97 0.00 0.00 3.32
507 509 2.438434 GCCATCCCTCACCGGTTG 60.438 66.667 2.97 0.00 0.00 3.77
508 510 2.308722 ATGCCATCCCTCACCGGTT 61.309 57.895 2.97 0.00 0.00 4.44
509 511 2.692368 ATGCCATCCCTCACCGGT 60.692 61.111 0.00 0.00 0.00 5.28
510 512 2.203252 CATGCCATCCCTCACCGG 60.203 66.667 0.00 0.00 0.00 5.28
511 513 2.898920 AAGCATGCCATCCCTCACCG 62.899 60.000 15.66 0.00 0.00 4.94
512 514 1.076485 AAGCATGCCATCCCTCACC 60.076 57.895 15.66 0.00 0.00 4.02
513 515 0.394762 TGAAGCATGCCATCCCTCAC 60.395 55.000 15.66 0.00 0.00 3.51
514 516 0.332293 TTGAAGCATGCCATCCCTCA 59.668 50.000 15.66 5.15 0.00 3.86
515 517 0.743097 GTTGAAGCATGCCATCCCTC 59.257 55.000 15.66 2.46 0.00 4.30
516 518 0.685458 GGTTGAAGCATGCCATCCCT 60.685 55.000 15.66 0.00 0.00 4.20
517 519 0.971959 TGGTTGAAGCATGCCATCCC 60.972 55.000 15.66 11.10 0.00 3.85
518 520 0.896923 TTGGTTGAAGCATGCCATCC 59.103 50.000 15.66 14.61 0.00 3.51
519 521 1.273048 TGTTGGTTGAAGCATGCCATC 59.727 47.619 15.66 14.00 0.00 3.51
520 522 1.340088 TGTTGGTTGAAGCATGCCAT 58.660 45.000 15.66 3.12 0.00 4.40
521 523 1.068895 CTTGTTGGTTGAAGCATGCCA 59.931 47.619 15.66 2.78 0.00 4.92
522 524 1.340889 TCTTGTTGGTTGAAGCATGCC 59.659 47.619 15.66 0.00 0.00 4.40
523 525 2.397549 GTCTTGTTGGTTGAAGCATGC 58.602 47.619 10.51 10.51 0.00 4.06
524 526 2.605338 CCGTCTTGTTGGTTGAAGCATG 60.605 50.000 0.00 0.00 0.00 4.06
525 527 1.608590 CCGTCTTGTTGGTTGAAGCAT 59.391 47.619 0.00 0.00 0.00 3.79
526 528 1.021202 CCGTCTTGTTGGTTGAAGCA 58.979 50.000 0.00 0.00 0.00 3.91
527 529 1.305201 TCCGTCTTGTTGGTTGAAGC 58.695 50.000 0.00 0.00 0.00 3.86
528 530 2.878406 ACATCCGTCTTGTTGGTTGAAG 59.122 45.455 0.00 0.00 0.00 3.02
529 531 2.925724 ACATCCGTCTTGTTGGTTGAA 58.074 42.857 0.00 0.00 0.00 2.69
530 532 2.631160 ACATCCGTCTTGTTGGTTGA 57.369 45.000 0.00 0.00 0.00 3.18
531 533 3.562141 TGTAACATCCGTCTTGTTGGTTG 59.438 43.478 5.44 0.00 37.81 3.77
532 534 3.811083 TGTAACATCCGTCTTGTTGGTT 58.189 40.909 5.44 0.00 37.81 3.67
533 535 3.478857 TGTAACATCCGTCTTGTTGGT 57.521 42.857 5.44 0.00 37.81 3.67
534 536 3.058501 GGTTGTAACATCCGTCTTGTTGG 60.059 47.826 5.44 0.00 37.81 3.77
535 537 3.363575 CGGTTGTAACATCCGTCTTGTTG 60.364 47.826 8.49 0.00 40.53 3.33
536 538 2.803956 CGGTTGTAACATCCGTCTTGTT 59.196 45.455 8.49 0.00 40.53 2.83
537 539 2.036217 TCGGTTGTAACATCCGTCTTGT 59.964 45.455 14.75 0.00 44.23 3.16
538 540 2.679450 TCGGTTGTAACATCCGTCTTG 58.321 47.619 14.75 0.00 44.23 3.02
539 541 3.604875 ATCGGTTGTAACATCCGTCTT 57.395 42.857 14.75 1.87 44.23 3.01
540 542 3.067742 CCTATCGGTTGTAACATCCGTCT 59.932 47.826 14.75 7.94 44.23 4.18
541 543 3.067180 TCCTATCGGTTGTAACATCCGTC 59.933 47.826 14.75 0.00 44.23 4.79
542 544 3.025978 TCCTATCGGTTGTAACATCCGT 58.974 45.455 14.75 6.95 44.23 4.69
543 545 3.720949 TCCTATCGGTTGTAACATCCG 57.279 47.619 10.11 10.11 44.94 4.18
544 546 6.746745 TTTTTCCTATCGGTTGTAACATCC 57.253 37.500 0.00 0.00 0.00 3.51
565 567 7.897575 TTTTGTGACTAGTTGCAACATTTTT 57.102 28.000 30.11 12.59 0.00 1.94
566 568 7.897575 TTTTTGTGACTAGTTGCAACATTTT 57.102 28.000 30.11 12.97 0.00 1.82
567 569 7.465781 GCATTTTTGTGACTAGTTGCAACATTT 60.466 33.333 30.11 13.89 0.00 2.32
568 570 6.018832 GCATTTTTGTGACTAGTTGCAACATT 60.019 34.615 30.11 14.08 0.00 2.71
569 571 5.463061 GCATTTTTGTGACTAGTTGCAACAT 59.537 36.000 30.11 15.78 0.00 2.71
570 572 4.803088 GCATTTTTGTGACTAGTTGCAACA 59.197 37.500 30.11 15.50 0.00 3.33
571 573 5.043248 AGCATTTTTGTGACTAGTTGCAAC 58.957 37.500 22.17 22.17 0.00 4.17
572 574 5.042593 CAGCATTTTTGTGACTAGTTGCAA 58.957 37.500 12.92 10.64 0.00 4.08
573 575 4.609947 CAGCATTTTTGTGACTAGTTGCA 58.390 39.130 12.92 5.64 0.00 4.08
574 576 3.426525 GCAGCATTTTTGTGACTAGTTGC 59.573 43.478 0.00 0.00 0.00 4.17
575 577 4.609947 TGCAGCATTTTTGTGACTAGTTG 58.390 39.130 0.00 0.00 0.00 3.16
576 578 4.916983 TGCAGCATTTTTGTGACTAGTT 57.083 36.364 0.00 0.00 0.00 2.24
577 579 4.321452 CCATGCAGCATTTTTGTGACTAGT 60.321 41.667 4.69 0.00 0.00 2.57
578 580 4.171005 CCATGCAGCATTTTTGTGACTAG 58.829 43.478 4.69 0.00 0.00 2.57
579 581 3.573538 ACCATGCAGCATTTTTGTGACTA 59.426 39.130 4.69 0.00 0.00 2.59
580 582 2.366266 ACCATGCAGCATTTTTGTGACT 59.634 40.909 4.69 0.00 0.00 3.41
581 583 2.733026 GACCATGCAGCATTTTTGTGAC 59.267 45.455 4.69 0.00 0.00 3.67
582 584 2.607526 CGACCATGCAGCATTTTTGTGA 60.608 45.455 4.69 0.00 0.00 3.58
583 585 1.722464 CGACCATGCAGCATTTTTGTG 59.278 47.619 4.69 0.00 0.00 3.33
584 586 1.612950 TCGACCATGCAGCATTTTTGT 59.387 42.857 4.69 0.52 0.00 2.83
585 587 1.987770 GTCGACCATGCAGCATTTTTG 59.012 47.619 4.69 0.00 0.00 2.44
586 588 1.888512 AGTCGACCATGCAGCATTTTT 59.111 42.857 13.01 0.00 0.00 1.94
587 589 1.538047 AGTCGACCATGCAGCATTTT 58.462 45.000 13.01 0.00 0.00 1.82
588 590 2.401583 TAGTCGACCATGCAGCATTT 57.598 45.000 13.01 0.00 0.00 2.32
589 591 2.093500 TCTTAGTCGACCATGCAGCATT 60.093 45.455 13.01 0.00 0.00 3.56
590 592 1.482182 TCTTAGTCGACCATGCAGCAT 59.518 47.619 13.01 0.52 0.00 3.79
591 593 0.894835 TCTTAGTCGACCATGCAGCA 59.105 50.000 13.01 0.00 0.00 4.41
592 594 1.134965 AGTCTTAGTCGACCATGCAGC 60.135 52.381 13.01 0.00 34.46 5.25
593 595 2.926200 CAAGTCTTAGTCGACCATGCAG 59.074 50.000 13.01 1.36 34.46 4.41
594 596 2.353704 CCAAGTCTTAGTCGACCATGCA 60.354 50.000 13.01 0.00 34.46 3.96
595 597 2.271800 CCAAGTCTTAGTCGACCATGC 58.728 52.381 13.01 0.00 34.46 4.06
596 598 3.594603 ACCAAGTCTTAGTCGACCATG 57.405 47.619 13.01 0.59 34.46 3.66
597 599 5.733620 TTAACCAAGTCTTAGTCGACCAT 57.266 39.130 13.01 0.00 34.46 3.55
598 600 5.534207 TTTAACCAAGTCTTAGTCGACCA 57.466 39.130 13.01 0.00 34.46 4.02
599 601 6.396450 AGATTTAACCAAGTCTTAGTCGACC 58.604 40.000 13.01 0.00 34.46 4.79
600 602 7.088905 TGAGATTTAACCAAGTCTTAGTCGAC 58.911 38.462 7.70 7.70 31.40 4.20
601 603 7.039923 ACTGAGATTTAACCAAGTCTTAGTCGA 60.040 37.037 2.74 0.00 40.87 4.20
602 604 7.091443 ACTGAGATTTAACCAAGTCTTAGTCG 58.909 38.462 2.74 0.00 40.87 4.18
603 605 8.468720 GACTGAGATTTAACCAAGTCTTAGTC 57.531 38.462 14.53 14.53 46.75 2.59
604 606 7.039923 TCGACTGAGATTTAACCAAGTCTTAGT 60.040 37.037 6.92 6.92 44.67 2.24
605 607 7.273815 GTCGACTGAGATTTAACCAAGTCTTAG 59.726 40.741 8.70 1.73 38.97 2.18
606 608 7.039923 AGTCGACTGAGATTTAACCAAGTCTTA 60.040 37.037 19.30 0.00 31.40 2.10
607 609 5.927115 GTCGACTGAGATTTAACCAAGTCTT 59.073 40.000 8.70 0.00 31.40 3.01
608 610 5.244178 AGTCGACTGAGATTTAACCAAGTCT 59.756 40.000 19.30 0.00 33.74 3.24
609 611 5.346281 CAGTCGACTGAGATTTAACCAAGTC 59.654 44.000 36.73 0.00 46.59 3.01
610 612 5.230942 CAGTCGACTGAGATTTAACCAAGT 58.769 41.667 36.73 0.00 46.59 3.16
611 613 5.769967 CAGTCGACTGAGATTTAACCAAG 57.230 43.478 36.73 7.53 46.59 3.61
624 626 3.372206 CCCTGCTAAAAATCAGTCGACTG 59.628 47.826 34.76 34.76 45.08 3.51
625 627 3.600388 CCCTGCTAAAAATCAGTCGACT 58.400 45.455 13.58 13.58 0.00 4.18
626 628 2.096013 GCCCTGCTAAAAATCAGTCGAC 59.904 50.000 7.70 7.70 0.00 4.20
627 629 2.356135 GCCCTGCTAAAAATCAGTCGA 58.644 47.619 0.00 0.00 0.00 4.20
628 630 1.401905 GGCCCTGCTAAAAATCAGTCG 59.598 52.381 0.00 0.00 0.00 4.18
629 631 1.401905 CGGCCCTGCTAAAAATCAGTC 59.598 52.381 0.00 0.00 0.00 3.51
630 632 1.463674 CGGCCCTGCTAAAAATCAGT 58.536 50.000 0.00 0.00 0.00 3.41
631 633 0.101219 GCGGCCCTGCTAAAAATCAG 59.899 55.000 0.00 0.00 0.00 2.90
632 634 0.323360 AGCGGCCCTGCTAAAAATCA 60.323 50.000 2.94 0.00 45.14 2.57
633 635 0.817654 AAGCGGCCCTGCTAAAAATC 59.182 50.000 5.49 0.00 46.60 2.17
634 636 2.137810 TAAGCGGCCCTGCTAAAAAT 57.862 45.000 5.49 0.00 46.60 1.82
635 637 1.912417 TTAAGCGGCCCTGCTAAAAA 58.088 45.000 5.49 0.00 46.60 1.94
636 638 2.137810 ATTAAGCGGCCCTGCTAAAA 57.862 45.000 5.49 4.48 46.60 1.52
637 639 2.137810 AATTAAGCGGCCCTGCTAAA 57.862 45.000 5.49 0.00 46.60 1.85
638 640 3.284793 TTAATTAAGCGGCCCTGCTAA 57.715 42.857 5.49 2.11 46.60 3.09
639 641 3.146066 CATTAATTAAGCGGCCCTGCTA 58.854 45.455 5.49 0.00 46.60 3.49
641 643 1.681264 ACATTAATTAAGCGGCCCTGC 59.319 47.619 3.94 0.00 0.00 4.85
642 644 2.948979 TCACATTAATTAAGCGGCCCTG 59.051 45.455 3.94 0.00 0.00 4.45
643 645 2.949644 GTCACATTAATTAAGCGGCCCT 59.050 45.455 3.94 0.00 0.00 5.19
644 646 2.949644 AGTCACATTAATTAAGCGGCCC 59.050 45.455 3.94 0.00 0.00 5.80
645 647 4.632538 AAGTCACATTAATTAAGCGGCC 57.367 40.909 3.94 0.00 0.00 6.13
646 648 6.725246 ACATAAGTCACATTAATTAAGCGGC 58.275 36.000 3.94 0.00 0.00 6.53
647 649 9.009327 CAAACATAAGTCACATTAATTAAGCGG 57.991 33.333 3.94 0.00 0.00 5.52
648 650 9.554724 ACAAACATAAGTCACATTAATTAAGCG 57.445 29.630 3.94 0.41 0.00 4.68
681 683 8.643324 GTTATGAGATTACCAGACAATCTACCT 58.357 37.037 0.00 0.00 41.66 3.08
722 724 6.039382 GGGAGTAATAGAAAAATCAACGCCAT 59.961 38.462 0.00 0.00 0.00 4.40
723 725 5.355910 GGGAGTAATAGAAAAATCAACGCCA 59.644 40.000 0.00 0.00 0.00 5.69
724 726 5.503520 CGGGAGTAATAGAAAAATCAACGCC 60.504 44.000 0.00 0.00 0.00 5.68
737 751 5.657474 TGTCTTTTGCTACGGGAGTAATAG 58.343 41.667 2.82 2.82 46.10 1.73
786 1045 1.474077 GTTGGGTCCAGAATGTGCATC 59.526 52.381 0.00 0.00 0.00 3.91
818 1077 3.069980 GCCCGTTGCCACACACAAA 62.070 57.895 0.00 0.00 0.00 2.83
820 1079 4.803908 TGCCCGTTGCCACACACA 62.804 61.111 0.00 0.00 40.16 3.72
821 1080 1.519751 TATTGCCCGTTGCCACACAC 61.520 55.000 0.00 0.00 40.16 3.82
822 1081 1.228276 TATTGCCCGTTGCCACACA 60.228 52.632 0.00 0.00 40.16 3.72
823 1082 0.958382 TCTATTGCCCGTTGCCACAC 60.958 55.000 0.00 0.00 40.16 3.82
824 1083 0.034574 ATCTATTGCCCGTTGCCACA 60.035 50.000 0.00 0.00 40.16 4.17
825 1084 0.381801 CATCTATTGCCCGTTGCCAC 59.618 55.000 0.00 0.00 40.16 5.01
826 1085 0.751277 CCATCTATTGCCCGTTGCCA 60.751 55.000 0.00 0.00 40.16 4.92
914 1175 7.041440 GGGTGGTTCGAATTTTGAATTTTGAAT 60.041 33.333 0.00 0.00 30.18 2.57
940 1201 3.591835 GTTGTGGTGGGCGTGGTG 61.592 66.667 0.00 0.00 0.00 4.17
1063 1329 2.027314 CGCTCCTCATGGCTCTCG 59.973 66.667 0.00 0.00 0.00 4.04
1302 1592 4.746115 GCAGATGCAACAACAGATTGAAAA 59.254 37.500 0.00 0.00 38.96 2.29
1366 1665 3.522731 CCTCTCCGCGTCCTCCAG 61.523 72.222 4.92 0.00 0.00 3.86
1367 1666 3.578968 TTCCTCTCCGCGTCCTCCA 62.579 63.158 4.92 0.00 0.00 3.86
1587 1898 3.066190 TAGTGGCGGGTGGAGACG 61.066 66.667 0.00 0.00 0.00 4.18
1604 1918 0.039437 CAGTACGCAGAACCACGAGT 60.039 55.000 0.00 0.00 0.00 4.18
1618 1932 3.878160 AGGCTACAGAAGAAGCAGTAC 57.122 47.619 0.00 0.00 40.61 2.73
1643 1957 0.969894 AACACGGAGACTGAAGAGGG 59.030 55.000 0.00 0.00 0.00 4.30
1656 1970 2.135933 GGAAGACTGAAGACAACACGG 58.864 52.381 0.00 0.00 0.00 4.94
1687 2005 1.889105 GGATCACACGGCATCGCAT 60.889 57.895 0.00 0.00 40.63 4.73
1709 2048 1.390123 CGGCGATTAATACAGCATCGG 59.610 52.381 0.00 0.00 40.16 4.18
1726 2065 8.656849 CAATGGTTATACTGAGATTAATACGGC 58.343 37.037 0.00 0.00 0.00 5.68
1727 2066 8.656849 GCAATGGTTATACTGAGATTAATACGG 58.343 37.037 0.00 0.00 0.00 4.02
1728 2067 9.424319 AGCAATGGTTATACTGAGATTAATACG 57.576 33.333 0.00 0.00 0.00 3.06
1730 2069 9.219603 GCAGCAATGGTTATACTGAGATTAATA 57.780 33.333 0.00 0.00 0.00 0.98
1731 2070 7.720957 TGCAGCAATGGTTATACTGAGATTAAT 59.279 33.333 0.00 0.00 0.00 1.40
1732 2071 7.053498 TGCAGCAATGGTTATACTGAGATTAA 58.947 34.615 0.00 0.00 0.00 1.40
1733 2072 6.591001 TGCAGCAATGGTTATACTGAGATTA 58.409 36.000 0.00 0.00 0.00 1.75
1734 2073 5.439721 TGCAGCAATGGTTATACTGAGATT 58.560 37.500 0.00 0.00 0.00 2.40
1735 2074 5.039920 TGCAGCAATGGTTATACTGAGAT 57.960 39.130 0.00 0.00 0.00 2.75
1736 2075 4.486125 TGCAGCAATGGTTATACTGAGA 57.514 40.909 0.00 0.00 0.00 3.27
1737 2076 4.214971 GGATGCAGCAATGGTTATACTGAG 59.785 45.833 3.51 0.00 0.00 3.35
1749 2088 0.895100 AACACACCGGATGCAGCAAT 60.895 50.000 9.46 0.00 0.00 3.56
1760 2099 4.629634 TGTAGATAGATTTGCAACACACCG 59.370 41.667 0.00 0.00 0.00 4.94
1836 3701 8.028938 CGTTCATTCTAATTTTCAATCAGGGTT 58.971 33.333 0.00 0.00 0.00 4.11
1900 3770 8.530269 AACTGCATTTTTCTTCTGATTTGATC 57.470 30.769 0.00 0.00 0.00 2.92
1937 3807 9.304731 CAATCAAATCCAATTCGATTGTATTGT 57.695 29.630 16.70 0.00 38.62 2.71
1986 3856 4.985538 TCACCCCAAATCCTATATCTTGC 58.014 43.478 0.00 0.00 0.00 4.01
2015 3885 4.038042 TGAAACTCTCCACATAGATAGCCG 59.962 45.833 0.00 0.00 0.00 5.52
2065 3935 4.273235 CACAGTGCATAAATTCAGCCGATA 59.727 41.667 0.00 0.00 0.00 2.92
2081 3951 0.730265 TTGTTTCACCGACACAGTGC 59.270 50.000 0.00 0.00 35.14 4.40
2086 3956 1.597663 CCTCACTTGTTTCACCGACAC 59.402 52.381 0.00 0.00 0.00 3.67
2091 3961 3.564225 CAGGTTACCTCACTTGTTTCACC 59.436 47.826 0.00 0.00 0.00 4.02
2109 3979 4.278419 AGCAAATTTCGCTAAAGAACAGGT 59.722 37.500 11.76 0.00 38.15 4.00
2111 3981 7.750458 TCATAAGCAAATTTCGCTAAAGAACAG 59.250 33.333 13.22 2.68 39.29 3.16
2112 3982 7.537306 GTCATAAGCAAATTTCGCTAAAGAACA 59.463 33.333 13.22 0.00 39.29 3.18
2113 3983 7.537306 TGTCATAAGCAAATTTCGCTAAAGAAC 59.463 33.333 13.22 9.80 39.29 3.01
2171 4045 2.238521 GGCATTCACAAGGAAACCTGA 58.761 47.619 0.00 0.00 39.39 3.86
2175 4049 3.993920 ACAATGGCATTCACAAGGAAAC 58.006 40.909 10.36 0.00 39.39 2.78
2182 4056 4.217334 ACATCGTTTACAATGGCATTCACA 59.783 37.500 10.36 0.00 0.00 3.58
2227 4101 0.988832 AACCACATGTCCCATACGGT 59.011 50.000 0.00 0.00 0.00 4.83
2228 4102 2.833794 CTAACCACATGTCCCATACGG 58.166 52.381 0.00 0.00 0.00 4.02
2229 4103 2.210116 GCTAACCACATGTCCCATACG 58.790 52.381 0.00 0.00 0.00 3.06
2230 4104 3.275617 TGCTAACCACATGTCCCATAC 57.724 47.619 0.00 0.00 0.00 2.39
2231 4105 4.308526 TTTGCTAACCACATGTCCCATA 57.691 40.909 0.00 0.00 0.00 2.74
2232 4106 2.897271 TTGCTAACCACATGTCCCAT 57.103 45.000 0.00 0.00 0.00 4.00
2233 4107 2.666272 TTTGCTAACCACATGTCCCA 57.334 45.000 0.00 0.00 0.00 4.37
2234 4108 3.509575 TGATTTTGCTAACCACATGTCCC 59.490 43.478 0.00 0.00 0.00 4.46
2235 4109 4.458989 TCTGATTTTGCTAACCACATGTCC 59.541 41.667 0.00 0.00 0.00 4.02
2236 4110 5.627499 TCTGATTTTGCTAACCACATGTC 57.373 39.130 0.00 0.00 0.00 3.06
2237 4111 6.594788 ATTCTGATTTTGCTAACCACATGT 57.405 33.333 0.00 0.00 0.00 3.21
2238 4112 7.092079 TGAATTCTGATTTTGCTAACCACATG 58.908 34.615 7.05 0.00 0.00 3.21
2239 4113 7.230849 TGAATTCTGATTTTGCTAACCACAT 57.769 32.000 7.05 0.00 0.00 3.21
2240 4114 6.647334 TGAATTCTGATTTTGCTAACCACA 57.353 33.333 7.05 0.00 0.00 4.17
2264 4138 9.647918 TGGCCACTTTATTGAATTGGTAATATA 57.352 29.630 0.00 0.00 39.57 0.86
2265 4139 8.546083 TGGCCACTTTATTGAATTGGTAATAT 57.454 30.769 0.00 0.00 39.57 1.28
2266 4140 7.962995 TGGCCACTTTATTGAATTGGTAATA 57.037 32.000 0.00 0.00 39.57 0.98
2267 4141 6.865834 TGGCCACTTTATTGAATTGGTAAT 57.134 33.333 0.00 0.00 39.57 1.89
2268 4142 6.438741 TCATGGCCACTTTATTGAATTGGTAA 59.561 34.615 8.16 0.00 39.57 2.85
2269 4143 5.954752 TCATGGCCACTTTATTGAATTGGTA 59.045 36.000 8.16 0.00 39.57 3.25
2270 4144 4.776837 TCATGGCCACTTTATTGAATTGGT 59.223 37.500 8.16 0.00 39.57 3.67
2271 4145 5.341872 TCATGGCCACTTTATTGAATTGG 57.658 39.130 8.16 0.00 40.17 3.16
2272 4146 5.756347 CCATCATGGCCACTTTATTGAATTG 59.244 40.000 8.16 2.86 0.00 2.32
2273 4147 5.920903 CCATCATGGCCACTTTATTGAATT 58.079 37.500 8.16 0.00 0.00 2.17
2274 4148 5.540400 CCATCATGGCCACTTTATTGAAT 57.460 39.130 8.16 0.00 0.00 2.57
2440 4316 1.077501 TGCTAAGATGTGGGCAGCC 60.078 57.895 1.26 1.26 0.00 4.85
2492 4369 8.617809 TCTTTTCTTTGGTGATGTAACAGTTAC 58.382 33.333 15.58 15.58 36.67 2.50
2527 4404 6.372937 AGAGAATTCGGAGAAGTGGATTTTTC 59.627 38.462 0.00 0.00 45.90 2.29
2528 4405 6.241645 AGAGAATTCGGAGAAGTGGATTTTT 58.758 36.000 0.00 0.00 45.90 1.94
2529 4406 5.810095 AGAGAATTCGGAGAAGTGGATTTT 58.190 37.500 0.00 0.00 45.90 1.82
2530 4407 5.423886 GAGAGAATTCGGAGAAGTGGATTT 58.576 41.667 0.00 0.00 45.90 2.17
2531 4408 4.440802 CGAGAGAATTCGGAGAAGTGGATT 60.441 45.833 0.00 0.00 45.90 3.01
2532 4409 3.067461 CGAGAGAATTCGGAGAAGTGGAT 59.933 47.826 0.00 0.00 45.90 3.41
2545 4422 1.996191 GCAGCGAAACTCGAGAGAATT 59.004 47.619 21.68 8.28 43.74 2.17
2792 4669 1.692411 GCCCATATGACCCAAAGTCC 58.308 55.000 3.65 0.00 45.68 3.85
2798 4675 4.248842 CCGCGCCCATATGACCCA 62.249 66.667 3.65 0.00 0.00 4.51
2801 4678 2.896801 CTTGCCGCGCCCATATGAC 61.897 63.158 3.65 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.