Multiple sequence alignment - TraesCS1B01G322100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G322100 chr1B 100.000 2418 0 0 1 2418 546536095 546533678 0.000000e+00 4466.0
1 TraesCS1B01G322100 chr1B 74.138 348 54 20 245 567 620931653 620931317 7.070000e-21 111.0
2 TraesCS1B01G322100 chr1B 82.857 70 11 1 264 333 622258071 622258003 7.220000e-06 62.1
3 TraesCS1B01G322100 chr1A 90.936 1699 86 34 747 2418 501708981 501707324 0.000000e+00 2222.0
4 TraesCS1B01G322100 chr1A 89.157 166 10 1 570 735 501709107 501708950 1.470000e-47 200.0
5 TraesCS1B01G322100 chr1D 90.636 833 35 11 1625 2418 406552007 406551179 0.000000e+00 1066.0
6 TraesCS1B01G322100 chr1D 88.671 662 35 12 1217 1848 406552481 406551830 0.000000e+00 771.0
7 TraesCS1B01G322100 chr1D 85.968 620 46 17 615 1219 406553154 406552561 2.040000e-175 625.0
8 TraesCS1B01G322100 chr1D 92.143 140 7 3 1625 1762 406551943 406551806 6.820000e-46 195.0
9 TraesCS1B01G322100 chr1D 92.537 134 10 0 108 241 319005854 319005721 2.450000e-45 193.0
10 TraesCS1B01G322100 chr1D 81.467 259 22 9 8 241 346814131 346814388 3.170000e-44 189.0
11 TraesCS1B01G322100 chr1D 79.245 212 30 3 29 239 332826481 332826679 4.190000e-28 135.0
12 TraesCS1B01G322100 chr1D 80.319 188 19 2 1679 1848 406552083 406551896 2.520000e-25 126.0
13 TraesCS1B01G322100 chr1D 78.906 128 20 6 390 512 483702969 483703094 1.990000e-11 80.5
14 TraesCS1B01G322100 chr3D 84.120 233 30 5 8 239 171740299 171740525 4.050000e-53 219.0
15 TraesCS1B01G322100 chr3D 92.537 134 9 1 108 241 371856999 371857131 8.820000e-45 191.0
16 TraesCS1B01G322100 chr7D 94.030 134 7 1 108 241 267830713 267830845 4.080000e-48 202.0
17 TraesCS1B01G322100 chr7D 93.284 134 8 1 108 241 327891383 327891515 1.900000e-46 196.0
18 TraesCS1B01G322100 chr2D 93.284 134 9 0 108 241 293644536 293644669 5.270000e-47 198.0
19 TraesCS1B01G322100 chr2D 80.400 250 23 9 17 241 264609175 264608927 1.490000e-37 167.0
20 TraesCS1B01G322100 chr6D 81.853 259 21 10 8 241 90938643 90938900 6.820000e-46 195.0
21 TraesCS1B01G322100 chr2B 92.537 134 10 0 108 241 62752356 62752489 2.450000e-45 193.0
22 TraesCS1B01G322100 chr2B 78.764 259 29 6 8 241 453543415 453543672 1.500000e-32 150.0
23 TraesCS1B01G322100 chr5B 82.110 218 36 2 13 228 604979172 604979388 1.480000e-42 183.0
24 TraesCS1B01G322100 chr4B 80.934 257 23 10 10 241 300415336 300415591 1.910000e-41 180.0
25 TraesCS1B01G322100 chr4B 78.346 254 31 9 11 241 111072758 111072506 2.510000e-30 143.0
26 TraesCS1B01G322100 chrUn 90.909 88 8 0 11 98 57216450 57216537 4.220000e-23 119.0
27 TraesCS1B01G322100 chr5D 80.000 145 24 5 242 384 40278613 40278472 4.250000e-18 102.0
28 TraesCS1B01G322100 chr5A 78.882 161 24 6 413 569 551501550 551501704 1.530000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G322100 chr1B 546533678 546536095 2417 True 4466.0 4466 100.0000 1 2418 1 chr1B.!!$R1 2417
1 TraesCS1B01G322100 chr1A 501707324 501709107 1783 True 1211.0 2222 90.0465 570 2418 2 chr1A.!!$R1 1848
2 TraesCS1B01G322100 chr1D 406551179 406553154 1975 True 556.6 1066 87.5474 615 2418 5 chr1D.!!$R2 1803

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
71 72 0.035056 CATGTTCACTGGGAGGGGTC 60.035 60.0 0.0 0.0 0.0 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1481 1601 0.963962 CAGTGAGGCTGGCATGTTTT 59.036 50.0 3.38 0.0 41.42 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.525221 GCGGGATGGTGGAAATGG 58.475 61.111 0.00 0.00 0.00 3.16
18 19 2.785425 GCGGGATGGTGGAAATGGC 61.785 63.158 0.00 0.00 0.00 4.40
19 20 2.127232 CGGGATGGTGGAAATGGCC 61.127 63.158 0.00 0.00 0.00 5.36
20 21 1.311059 GGGATGGTGGAAATGGCCT 59.689 57.895 3.32 0.00 0.00 5.19
21 22 0.325577 GGGATGGTGGAAATGGCCTT 60.326 55.000 3.32 0.00 0.00 4.35
22 23 1.114627 GGATGGTGGAAATGGCCTTC 58.885 55.000 3.32 0.00 0.00 3.46
23 24 1.342374 GGATGGTGGAAATGGCCTTCT 60.342 52.381 3.32 0.00 0.00 2.85
24 25 1.753073 GATGGTGGAAATGGCCTTCTG 59.247 52.381 3.32 0.00 0.00 3.02
25 26 0.482446 TGGTGGAAATGGCCTTCTGT 59.518 50.000 3.32 0.00 0.00 3.41
26 27 1.133199 TGGTGGAAATGGCCTTCTGTT 60.133 47.619 3.32 0.00 0.00 3.16
27 28 1.546029 GGTGGAAATGGCCTTCTGTTC 59.454 52.381 3.32 0.00 0.00 3.18
28 29 1.200020 GTGGAAATGGCCTTCTGTTCG 59.800 52.381 3.32 0.00 0.00 3.95
29 30 1.073125 TGGAAATGGCCTTCTGTTCGA 59.927 47.619 3.32 0.00 0.00 3.71
30 31 1.468914 GGAAATGGCCTTCTGTTCGAC 59.531 52.381 3.32 0.00 0.00 4.20
31 32 1.468914 GAAATGGCCTTCTGTTCGACC 59.531 52.381 3.32 0.00 0.00 4.79
32 33 0.673644 AATGGCCTTCTGTTCGACCG 60.674 55.000 3.32 0.00 0.00 4.79
33 34 3.119096 GGCCTTCTGTTCGACCGC 61.119 66.667 0.00 0.00 0.00 5.68
34 35 3.119096 GCCTTCTGTTCGACCGCC 61.119 66.667 0.00 0.00 0.00 6.13
35 36 2.657237 CCTTCTGTTCGACCGCCT 59.343 61.111 0.00 0.00 0.00 5.52
36 37 1.888018 CCTTCTGTTCGACCGCCTA 59.112 57.895 0.00 0.00 0.00 3.93
37 38 0.458025 CCTTCTGTTCGACCGCCTAC 60.458 60.000 0.00 0.00 0.00 3.18
38 39 0.242825 CTTCTGTTCGACCGCCTACA 59.757 55.000 0.00 0.00 0.00 2.74
39 40 0.242825 TTCTGTTCGACCGCCTACAG 59.757 55.000 6.37 6.37 39.41 2.74
40 41 0.892358 TCTGTTCGACCGCCTACAGT 60.892 55.000 11.36 0.00 39.16 3.55
41 42 0.038526 CTGTTCGACCGCCTACAGTT 60.039 55.000 4.81 0.00 34.68 3.16
42 43 1.200716 CTGTTCGACCGCCTACAGTTA 59.799 52.381 4.81 0.00 34.68 2.24
43 44 1.612950 TGTTCGACCGCCTACAGTTAA 59.387 47.619 0.00 0.00 0.00 2.01
44 45 2.035704 TGTTCGACCGCCTACAGTTAAA 59.964 45.455 0.00 0.00 0.00 1.52
45 46 3.059166 GTTCGACCGCCTACAGTTAAAA 58.941 45.455 0.00 0.00 0.00 1.52
46 47 2.676076 TCGACCGCCTACAGTTAAAAC 58.324 47.619 0.00 0.00 0.00 2.43
47 48 2.035704 TCGACCGCCTACAGTTAAAACA 59.964 45.455 0.00 0.00 0.00 2.83
48 49 2.410730 CGACCGCCTACAGTTAAAACAG 59.589 50.000 0.00 0.00 0.00 3.16
49 50 2.740447 GACCGCCTACAGTTAAAACAGG 59.260 50.000 0.00 0.00 0.00 4.00
50 51 2.369532 ACCGCCTACAGTTAAAACAGGA 59.630 45.455 2.72 0.00 0.00 3.86
51 52 3.008704 ACCGCCTACAGTTAAAACAGGAT 59.991 43.478 2.72 0.00 0.00 3.24
52 53 3.621715 CCGCCTACAGTTAAAACAGGATC 59.378 47.826 2.72 0.00 0.00 3.36
53 54 4.250464 CGCCTACAGTTAAAACAGGATCA 58.750 43.478 0.00 0.00 0.00 2.92
54 55 4.876107 CGCCTACAGTTAAAACAGGATCAT 59.124 41.667 0.00 0.00 0.00 2.45
55 56 5.220662 CGCCTACAGTTAAAACAGGATCATG 60.221 44.000 5.68 5.68 0.00 3.07
56 57 5.648092 GCCTACAGTTAAAACAGGATCATGT 59.352 40.000 7.30 7.30 33.96 3.21
57 58 6.151144 GCCTACAGTTAAAACAGGATCATGTT 59.849 38.462 19.49 19.49 45.18 2.71
58 59 7.626452 GCCTACAGTTAAAACAGGATCATGTTC 60.626 40.741 24.54 12.92 42.49 3.18
59 60 7.390440 CCTACAGTTAAAACAGGATCATGTTCA 59.610 37.037 24.54 13.62 42.49 3.18
60 61 6.970484 ACAGTTAAAACAGGATCATGTTCAC 58.030 36.000 24.54 19.81 42.49 3.18
61 62 6.772716 ACAGTTAAAACAGGATCATGTTCACT 59.227 34.615 24.54 21.40 42.49 3.41
62 63 7.080099 CAGTTAAAACAGGATCATGTTCACTG 58.920 38.462 27.68 27.68 42.49 3.66
63 64 6.207417 AGTTAAAACAGGATCATGTTCACTGG 59.793 38.462 24.54 0.00 42.49 4.00
64 65 2.795231 ACAGGATCATGTTCACTGGG 57.205 50.000 7.30 3.91 33.63 4.45
65 66 2.269023 ACAGGATCATGTTCACTGGGA 58.731 47.619 7.30 0.00 33.63 4.37
66 67 2.238144 ACAGGATCATGTTCACTGGGAG 59.762 50.000 7.30 0.00 33.63 4.30
67 68 1.842562 AGGATCATGTTCACTGGGAGG 59.157 52.381 6.14 0.00 0.00 4.30
68 69 1.133976 GGATCATGTTCACTGGGAGGG 60.134 57.143 6.14 0.00 0.00 4.30
69 70 0.921896 ATCATGTTCACTGGGAGGGG 59.078 55.000 0.00 0.00 0.00 4.79
70 71 0.475632 TCATGTTCACTGGGAGGGGT 60.476 55.000 0.00 0.00 0.00 4.95
71 72 0.035056 CATGTTCACTGGGAGGGGTC 60.035 60.000 0.00 0.00 0.00 4.46
72 73 0.178861 ATGTTCACTGGGAGGGGTCT 60.179 55.000 0.00 0.00 0.00 3.85
73 74 1.127567 TGTTCACTGGGAGGGGTCTG 61.128 60.000 0.00 0.00 0.00 3.51
74 75 1.538876 TTCACTGGGAGGGGTCTGG 60.539 63.158 0.00 0.00 0.00 3.86
75 76 3.721706 CACTGGGAGGGGTCTGGC 61.722 72.222 0.00 0.00 0.00 4.85
78 79 3.976490 CTGGGAGGGGTCTGGCGTA 62.976 68.421 0.00 0.00 0.00 4.42
79 80 3.468140 GGGAGGGGTCTGGCGTAC 61.468 72.222 0.00 0.00 0.00 3.67
80 81 3.468140 GGAGGGGTCTGGCGTACC 61.468 72.222 0.00 0.00 36.19 3.34
81 82 3.834799 GAGGGGTCTGGCGTACCG 61.835 72.222 2.40 0.00 39.70 4.02
95 96 3.546002 CGTACCGCAAAATGAAGGAAA 57.454 42.857 0.00 0.00 0.00 3.13
96 97 3.231160 CGTACCGCAAAATGAAGGAAAC 58.769 45.455 0.00 0.00 0.00 2.78
97 98 3.304123 CGTACCGCAAAATGAAGGAAACA 60.304 43.478 0.00 0.00 0.00 2.83
98 99 3.092334 ACCGCAAAATGAAGGAAACAC 57.908 42.857 0.43 0.00 0.00 3.32
99 100 2.223947 ACCGCAAAATGAAGGAAACACC 60.224 45.455 0.43 0.00 39.35 4.16
100 101 2.403259 CGCAAAATGAAGGAAACACCC 58.597 47.619 0.00 0.00 40.05 4.61
101 102 2.766313 GCAAAATGAAGGAAACACCCC 58.234 47.619 0.00 0.00 40.05 4.95
102 103 2.866065 GCAAAATGAAGGAAACACCCCG 60.866 50.000 0.00 0.00 40.05 5.73
103 104 2.364002 CAAAATGAAGGAAACACCCCGT 59.636 45.455 0.00 0.00 40.05 5.28
104 105 2.375014 AATGAAGGAAACACCCCGTT 57.625 45.000 0.00 0.00 40.50 4.44
111 112 3.414486 AAACACCCCGTTTCTCCTG 57.586 52.632 0.00 0.00 44.78 3.86
112 113 0.549469 AAACACCCCGTTTCTCCTGT 59.451 50.000 0.00 0.00 44.78 4.00
113 114 0.549469 AACACCCCGTTTCTCCTGTT 59.451 50.000 0.00 0.00 32.35 3.16
114 115 0.179029 ACACCCCGTTTCTCCTGTTG 60.179 55.000 0.00 0.00 0.00 3.33
115 116 0.107831 CACCCCGTTTCTCCTGTTGA 59.892 55.000 0.00 0.00 0.00 3.18
116 117 1.064825 ACCCCGTTTCTCCTGTTGAT 58.935 50.000 0.00 0.00 0.00 2.57
117 118 1.003233 ACCCCGTTTCTCCTGTTGATC 59.997 52.381 0.00 0.00 0.00 2.92
118 119 1.359848 CCCGTTTCTCCTGTTGATCG 58.640 55.000 0.00 0.00 0.00 3.69
119 120 1.359848 CCGTTTCTCCTGTTGATCGG 58.640 55.000 0.00 0.00 0.00 4.18
120 121 1.359848 CGTTTCTCCTGTTGATCGGG 58.640 55.000 0.00 0.00 43.70 5.14
124 125 4.050313 TCCTGTTGATCGGGAGGG 57.950 61.111 4.39 0.00 45.77 4.30
125 126 1.689233 TCCTGTTGATCGGGAGGGG 60.689 63.158 4.39 0.00 45.77 4.79
126 127 1.995626 CCTGTTGATCGGGAGGGGT 60.996 63.158 0.00 0.00 45.09 4.95
127 128 1.221840 CTGTTGATCGGGAGGGGTG 59.778 63.158 0.00 0.00 0.00 4.61
128 129 1.537889 TGTTGATCGGGAGGGGTGT 60.538 57.895 0.00 0.00 0.00 4.16
129 130 1.078426 GTTGATCGGGAGGGGTGTG 60.078 63.158 0.00 0.00 0.00 3.82
130 131 2.297895 TTGATCGGGAGGGGTGTGG 61.298 63.158 0.00 0.00 0.00 4.17
131 132 4.176752 GATCGGGAGGGGTGTGGC 62.177 72.222 0.00 0.00 0.00 5.01
135 136 4.091939 GGGAGGGGTGTGGCGTAC 62.092 72.222 0.00 0.00 0.00 3.67
136 137 4.091939 GGAGGGGTGTGGCGTACC 62.092 72.222 1.65 1.65 37.48 3.34
137 138 3.315949 GAGGGGTGTGGCGTACCA 61.316 66.667 11.42 0.00 46.51 3.25
156 157 3.282831 CACAAAATGGAGGAAACGGAC 57.717 47.619 0.00 0.00 0.00 4.79
157 158 2.884639 CACAAAATGGAGGAAACGGACT 59.115 45.455 0.00 0.00 0.00 3.85
158 159 3.317993 CACAAAATGGAGGAAACGGACTT 59.682 43.478 0.00 0.00 0.00 3.01
159 160 3.568430 ACAAAATGGAGGAAACGGACTTC 59.432 43.478 0.00 0.00 0.00 3.01
160 161 3.790089 AAATGGAGGAAACGGACTTCT 57.210 42.857 0.00 0.00 0.00 2.85
161 162 3.336138 AATGGAGGAAACGGACTTCTC 57.664 47.619 0.00 0.00 0.00 2.87
162 163 2.011122 TGGAGGAAACGGACTTCTCT 57.989 50.000 0.00 0.00 0.00 3.10
163 164 2.326428 TGGAGGAAACGGACTTCTCTT 58.674 47.619 0.00 0.00 0.00 2.85
164 165 2.299297 TGGAGGAAACGGACTTCTCTTC 59.701 50.000 0.00 0.00 0.00 2.87
165 166 2.597520 GAGGAAACGGACTTCTCTTCG 58.402 52.381 0.00 0.00 0.00 3.79
166 167 2.228343 GAGGAAACGGACTTCTCTTCGA 59.772 50.000 0.00 0.00 0.00 3.71
167 168 2.030096 AGGAAACGGACTTCTCTTCGAC 60.030 50.000 0.00 0.00 0.00 4.20
168 169 2.326664 GAAACGGACTTCTCTTCGACC 58.673 52.381 0.00 0.00 0.00 4.79
169 170 1.618487 AACGGACTTCTCTTCGACCT 58.382 50.000 0.00 0.00 0.00 3.85
170 171 1.166989 ACGGACTTCTCTTCGACCTC 58.833 55.000 0.00 0.00 0.00 3.85
171 172 0.452585 CGGACTTCTCTTCGACCTCC 59.547 60.000 0.00 0.00 0.00 4.30
172 173 1.842052 GGACTTCTCTTCGACCTCCT 58.158 55.000 0.00 0.00 0.00 3.69
173 174 2.680221 CGGACTTCTCTTCGACCTCCTA 60.680 54.545 0.00 0.00 0.00 2.94
174 175 2.684374 GGACTTCTCTTCGACCTCCTAC 59.316 54.545 0.00 0.00 0.00 3.18
175 176 2.352342 GACTTCTCTTCGACCTCCTACG 59.648 54.545 0.00 0.00 0.00 3.51
176 177 1.671845 CTTCTCTTCGACCTCCTACGG 59.328 57.143 0.00 0.00 0.00 4.02
177 178 0.617413 TCTCTTCGACCTCCTACGGT 59.383 55.000 0.00 0.00 40.80 4.83
183 184 3.710106 GACCTCCTACGGTCGAAAC 57.290 57.895 0.00 0.00 43.56 2.78
184 185 0.883833 GACCTCCTACGGTCGAAACA 59.116 55.000 0.00 0.00 43.56 2.83
185 186 0.886563 ACCTCCTACGGTCGAAACAG 59.113 55.000 0.00 0.00 29.14 3.16
186 187 0.172803 CCTCCTACGGTCGAAACAGG 59.827 60.000 0.00 0.00 0.00 4.00
187 188 0.172803 CTCCTACGGTCGAAACAGGG 59.827 60.000 0.00 0.00 0.00 4.45
188 189 0.251297 TCCTACGGTCGAAACAGGGA 60.251 55.000 0.00 0.00 0.00 4.20
189 190 0.822164 CCTACGGTCGAAACAGGGAT 59.178 55.000 0.00 0.00 0.00 3.85
190 191 1.202382 CCTACGGTCGAAACAGGGATC 60.202 57.143 0.00 0.00 0.00 3.36
191 192 1.475280 CTACGGTCGAAACAGGGATCA 59.525 52.381 0.00 0.00 0.00 2.92
192 193 0.902531 ACGGTCGAAACAGGGATCAT 59.097 50.000 0.00 0.00 0.00 2.45
193 194 1.290203 CGGTCGAAACAGGGATCATG 58.710 55.000 0.00 0.00 0.00 3.07
194 195 1.405526 CGGTCGAAACAGGGATCATGT 60.406 52.381 0.00 0.00 0.00 3.21
195 196 2.711542 GGTCGAAACAGGGATCATGTT 58.288 47.619 9.16 9.16 42.55 2.71
196 197 2.678336 GGTCGAAACAGGGATCATGTTC 59.322 50.000 13.95 8.36 39.91 3.18
197 198 3.334691 GTCGAAACAGGGATCATGTTCA 58.665 45.455 13.95 2.15 39.91 3.18
198 199 3.941483 GTCGAAACAGGGATCATGTTCAT 59.059 43.478 13.95 2.47 39.91 2.57
199 200 4.034510 GTCGAAACAGGGATCATGTTCATC 59.965 45.833 13.95 9.25 39.91 2.92
200 201 3.001634 CGAAACAGGGATCATGTTCATCG 59.998 47.826 13.95 15.24 39.91 3.84
201 202 2.627515 ACAGGGATCATGTTCATCGG 57.372 50.000 6.14 1.72 0.00 4.18
202 203 1.141657 ACAGGGATCATGTTCATCGGG 59.858 52.381 6.14 0.00 0.00 5.14
203 204 1.417517 CAGGGATCATGTTCATCGGGA 59.582 52.381 6.14 0.00 0.00 5.14
204 205 1.696336 AGGGATCATGTTCATCGGGAG 59.304 52.381 6.14 0.00 0.00 4.30
205 206 1.271054 GGGATCATGTTCATCGGGAGG 60.271 57.143 6.14 0.00 0.00 4.30
206 207 1.271054 GGATCATGTTCATCGGGAGGG 60.271 57.143 6.14 0.00 0.00 4.30
207 208 0.767375 ATCATGTTCATCGGGAGGGG 59.233 55.000 0.00 0.00 0.00 4.79
208 209 0.620410 TCATGTTCATCGGGAGGGGT 60.620 55.000 0.00 0.00 0.00 4.95
209 210 0.464373 CATGTTCATCGGGAGGGGTG 60.464 60.000 0.00 0.00 0.00 4.61
210 211 0.914417 ATGTTCATCGGGAGGGGTGT 60.914 55.000 0.00 0.00 0.00 4.16
211 212 1.078426 GTTCATCGGGAGGGGTGTG 60.078 63.158 0.00 0.00 0.00 3.82
212 213 2.297895 TTCATCGGGAGGGGTGTGG 61.298 63.158 0.00 0.00 0.00 4.17
213 214 4.489771 CATCGGGAGGGGTGTGGC 62.490 72.222 0.00 0.00 0.00 5.01
214 215 4.741239 ATCGGGAGGGGTGTGGCT 62.741 66.667 0.00 0.00 0.00 4.75
217 218 4.035102 GGGAGGGGTGTGGCTCAC 62.035 72.222 11.10 11.10 45.47 3.51
226 227 0.233848 GTGTGGCTCACCGTAAAACG 59.766 55.000 8.47 0.00 40.84 3.60
262 263 3.433319 GGCGAGATGGCGACTCTA 58.567 61.111 0.00 0.00 36.09 2.43
263 264 1.008309 GGCGAGATGGCGACTCTAC 60.008 63.158 0.00 2.18 36.09 2.59
264 265 1.008309 GCGAGATGGCGACTCTACC 60.008 63.158 0.00 0.00 32.87 3.18
265 266 1.725557 GCGAGATGGCGACTCTACCA 61.726 60.000 0.00 0.00 41.06 3.25
269 270 2.041976 ATGGCGACTCTACCATCGG 58.958 57.895 0.00 0.00 43.26 4.18
270 271 0.467474 ATGGCGACTCTACCATCGGA 60.467 55.000 0.00 0.00 43.26 4.55
271 272 1.101635 TGGCGACTCTACCATCGGAG 61.102 60.000 0.00 0.00 38.78 4.63
272 273 0.818445 GGCGACTCTACCATCGGAGA 60.818 60.000 0.00 0.00 45.75 3.71
273 274 1.022735 GCGACTCTACCATCGGAGAA 58.977 55.000 0.00 0.00 43.58 2.87
274 275 1.404391 GCGACTCTACCATCGGAGAAA 59.596 52.381 0.00 0.00 43.58 2.52
275 276 2.795331 GCGACTCTACCATCGGAGAAAC 60.795 54.545 0.00 0.00 43.58 2.78
276 277 2.223525 CGACTCTACCATCGGAGAAACC 60.224 54.545 0.00 0.00 43.58 3.27
285 286 3.497879 GGAGAAACCGAATGGGCG 58.502 61.111 0.00 0.00 40.62 6.13
302 303 3.151022 GGTGAGGCGAGAGGGGAG 61.151 72.222 0.00 0.00 0.00 4.30
303 304 2.043852 GTGAGGCGAGAGGGGAGA 60.044 66.667 0.00 0.00 0.00 3.71
304 305 2.043852 TGAGGCGAGAGGGGAGAC 60.044 66.667 0.00 0.00 0.00 3.36
305 306 2.043852 GAGGCGAGAGGGGAGACA 60.044 66.667 0.00 0.00 0.00 3.41
306 307 2.043450 AGGCGAGAGGGGAGACAG 60.043 66.667 0.00 0.00 0.00 3.51
307 308 2.363147 GGCGAGAGGGGAGACAGT 60.363 66.667 0.00 0.00 0.00 3.55
308 309 2.716017 GGCGAGAGGGGAGACAGTG 61.716 68.421 0.00 0.00 0.00 3.66
309 310 2.888863 CGAGAGGGGAGACAGTGC 59.111 66.667 0.00 0.00 0.00 4.40
310 311 2.888863 GAGAGGGGAGACAGTGCG 59.111 66.667 0.00 0.00 0.00 5.34
311 312 1.979693 GAGAGGGGAGACAGTGCGT 60.980 63.158 0.00 0.00 0.00 5.24
312 313 2.219325 GAGAGGGGAGACAGTGCGTG 62.219 65.000 0.00 0.00 0.00 5.34
313 314 3.941657 GAGGGGAGACAGTGCGTGC 62.942 68.421 0.00 0.00 0.00 5.34
315 316 4.357947 GGGAGACAGTGCGTGCGA 62.358 66.667 0.00 0.00 0.00 5.10
316 317 2.355837 GGAGACAGTGCGTGCGAA 60.356 61.111 0.00 0.00 0.00 4.70
317 318 1.738099 GGAGACAGTGCGTGCGAAT 60.738 57.895 0.00 0.00 0.00 3.34
318 319 1.291877 GGAGACAGTGCGTGCGAATT 61.292 55.000 0.00 0.00 0.00 2.17
319 320 0.179240 GAGACAGTGCGTGCGAATTG 60.179 55.000 0.00 0.00 0.00 2.32
320 321 0.880278 AGACAGTGCGTGCGAATTGT 60.880 50.000 0.23 0.23 0.00 2.71
321 322 0.451135 GACAGTGCGTGCGAATTGTC 60.451 55.000 11.45 11.45 0.00 3.18
335 336 4.070581 GAATTGTCGAGTGTGGTGATTG 57.929 45.455 0.00 0.00 0.00 2.67
336 337 1.225855 TTGTCGAGTGTGGTGATTGC 58.774 50.000 0.00 0.00 0.00 3.56
337 338 0.105778 TGTCGAGTGTGGTGATTGCA 59.894 50.000 0.00 0.00 0.00 4.08
338 339 1.225855 GTCGAGTGTGGTGATTGCAA 58.774 50.000 0.00 0.00 0.00 4.08
339 340 1.195448 GTCGAGTGTGGTGATTGCAAG 59.805 52.381 4.94 0.00 0.00 4.01
340 341 0.518636 CGAGTGTGGTGATTGCAAGG 59.481 55.000 4.94 0.00 0.00 3.61
341 342 1.877680 CGAGTGTGGTGATTGCAAGGA 60.878 52.381 4.94 0.00 0.00 3.36
342 343 1.808945 GAGTGTGGTGATTGCAAGGAG 59.191 52.381 4.94 0.00 0.00 3.69
343 344 0.242017 GTGTGGTGATTGCAAGGAGC 59.758 55.000 4.94 3.98 45.96 4.70
353 354 3.641017 GCAAGGAGCAAGGAGAGTT 57.359 52.632 0.00 0.00 44.79 3.01
354 355 2.770164 GCAAGGAGCAAGGAGAGTTA 57.230 50.000 0.00 0.00 44.79 2.24
355 356 2.626840 GCAAGGAGCAAGGAGAGTTAG 58.373 52.381 0.00 0.00 44.79 2.34
356 357 2.234908 GCAAGGAGCAAGGAGAGTTAGA 59.765 50.000 0.00 0.00 44.79 2.10
357 358 3.678529 GCAAGGAGCAAGGAGAGTTAGAG 60.679 52.174 0.00 0.00 44.79 2.43
358 359 3.748645 AGGAGCAAGGAGAGTTAGAGA 57.251 47.619 0.00 0.00 0.00 3.10
359 360 3.361786 AGGAGCAAGGAGAGTTAGAGAC 58.638 50.000 0.00 0.00 0.00 3.36
360 361 2.098443 GGAGCAAGGAGAGTTAGAGACG 59.902 54.545 0.00 0.00 0.00 4.18
361 362 2.750712 GAGCAAGGAGAGTTAGAGACGT 59.249 50.000 0.00 0.00 0.00 4.34
362 363 2.750712 AGCAAGGAGAGTTAGAGACGTC 59.249 50.000 7.70 7.70 0.00 4.34
363 364 2.488545 GCAAGGAGAGTTAGAGACGTCA 59.511 50.000 19.50 0.00 0.00 4.35
364 365 3.129638 GCAAGGAGAGTTAGAGACGTCAT 59.870 47.826 19.50 8.48 0.00 3.06
365 366 4.667262 CAAGGAGAGTTAGAGACGTCATG 58.333 47.826 19.50 0.00 0.00 3.07
366 367 3.958018 AGGAGAGTTAGAGACGTCATGT 58.042 45.455 19.50 3.86 0.00 3.21
375 376 2.875485 ACGTCATGTCGTCTCCCG 59.125 61.111 12.25 0.00 40.04 5.14
376 377 2.579787 CGTCATGTCGTCTCCCGC 60.580 66.667 4.09 0.00 36.19 6.13
377 378 2.579787 GTCATGTCGTCTCCCGCG 60.580 66.667 0.00 0.00 36.19 6.46
378 379 4.492160 TCATGTCGTCTCCCGCGC 62.492 66.667 0.00 0.00 36.19 6.86
379 380 4.498520 CATGTCGTCTCCCGCGCT 62.499 66.667 5.56 0.00 36.19 5.92
380 381 3.760035 ATGTCGTCTCCCGCGCTT 61.760 61.111 5.56 0.00 36.19 4.68
381 382 3.701604 ATGTCGTCTCCCGCGCTTC 62.702 63.158 5.56 0.00 36.19 3.86
394 395 3.512516 GCTTCCCACGCATGGCTC 61.513 66.667 0.00 0.00 45.76 4.70
395 396 3.197790 CTTCCCACGCATGGCTCG 61.198 66.667 0.00 0.00 45.76 5.03
396 397 3.664025 CTTCCCACGCATGGCTCGA 62.664 63.158 0.00 0.00 45.76 4.04
397 398 3.664025 TTCCCACGCATGGCTCGAG 62.664 63.158 8.45 8.45 45.76 4.04
408 409 3.183259 GCTCGAGCGAGACAGACT 58.817 61.111 23.61 0.00 44.53 3.24
409 410 1.061887 GCTCGAGCGAGACAGACTC 59.938 63.158 23.61 0.29 44.53 3.36
410 411 1.366111 GCTCGAGCGAGACAGACTCT 61.366 60.000 23.61 0.00 44.53 3.24
411 412 1.083489 CTCGAGCGAGACAGACTCTT 58.917 55.000 14.28 0.00 44.53 2.85
412 413 2.272678 CTCGAGCGAGACAGACTCTTA 58.727 52.381 14.28 0.00 44.53 2.10
413 414 2.673862 CTCGAGCGAGACAGACTCTTAA 59.326 50.000 14.28 0.00 44.53 1.85
414 415 3.072211 TCGAGCGAGACAGACTCTTAAA 58.928 45.455 0.00 0.00 42.92 1.52
415 416 3.501062 TCGAGCGAGACAGACTCTTAAAA 59.499 43.478 0.00 0.00 42.92 1.52
416 417 4.023450 TCGAGCGAGACAGACTCTTAAAAA 60.023 41.667 0.00 0.00 42.92 1.94
417 418 4.859798 CGAGCGAGACAGACTCTTAAAAAT 59.140 41.667 0.00 0.00 42.92 1.82
418 419 5.346281 CGAGCGAGACAGACTCTTAAAAATT 59.654 40.000 0.00 0.00 42.92 1.82
419 420 6.128795 CGAGCGAGACAGACTCTTAAAAATTT 60.129 38.462 0.00 0.00 42.92 1.82
420 421 6.892691 AGCGAGACAGACTCTTAAAAATTTG 58.107 36.000 0.00 0.00 42.92 2.32
421 422 5.565638 GCGAGACAGACTCTTAAAAATTTGC 59.434 40.000 0.00 0.00 42.92 3.68
422 423 6.080406 CGAGACAGACTCTTAAAAATTTGCC 58.920 40.000 0.00 0.00 42.92 4.52
423 424 6.002062 AGACAGACTCTTAAAAATTTGCCG 57.998 37.500 0.00 0.00 0.00 5.69
424 425 5.763204 AGACAGACTCTTAAAAATTTGCCGA 59.237 36.000 0.00 0.00 0.00 5.54
425 426 6.431234 AGACAGACTCTTAAAAATTTGCCGAT 59.569 34.615 0.00 0.00 0.00 4.18
426 427 6.981722 ACAGACTCTTAAAAATTTGCCGATT 58.018 32.000 0.00 0.00 0.00 3.34
427 428 7.084486 ACAGACTCTTAAAAATTTGCCGATTC 58.916 34.615 0.00 0.00 0.00 2.52
428 429 6.249260 CAGACTCTTAAAAATTTGCCGATTCG 59.751 38.462 0.00 0.00 0.00 3.34
438 439 3.252484 CCGATTCGGCCGTTCGTC 61.252 66.667 33.97 23.25 41.17 4.20
439 440 3.252484 CGATTCGGCCGTTCGTCC 61.252 66.667 31.11 15.29 0.00 4.79
440 441 2.125832 GATTCGGCCGTTCGTCCA 60.126 61.111 27.15 0.00 0.00 4.02
441 442 2.125673 ATTCGGCCGTTCGTCCAG 60.126 61.111 27.15 0.00 0.00 3.86
442 443 2.552585 GATTCGGCCGTTCGTCCAGA 62.553 60.000 27.15 0.00 0.00 3.86
443 444 2.558554 ATTCGGCCGTTCGTCCAGAG 62.559 60.000 27.15 0.00 0.00 3.35
445 446 4.070552 GGCCGTTCGTCCAGAGCT 62.071 66.667 0.00 0.00 0.00 4.09
446 447 2.507324 GCCGTTCGTCCAGAGCTC 60.507 66.667 5.27 5.27 0.00 4.09
447 448 2.995872 GCCGTTCGTCCAGAGCTCT 61.996 63.158 11.45 11.45 0.00 4.09
448 449 1.137825 CCGTTCGTCCAGAGCTCTC 59.862 63.158 14.96 1.47 0.00 3.20
449 450 1.587043 CCGTTCGTCCAGAGCTCTCA 61.587 60.000 14.96 0.00 0.00 3.27
450 451 0.179176 CGTTCGTCCAGAGCTCTCAG 60.179 60.000 14.96 8.72 0.00 3.35
451 452 0.457681 GTTCGTCCAGAGCTCTCAGC 60.458 60.000 14.96 5.58 42.84 4.26
452 453 1.599606 TTCGTCCAGAGCTCTCAGCC 61.600 60.000 14.96 0.00 43.77 4.85
453 454 2.346541 CGTCCAGAGCTCTCAGCCA 61.347 63.158 14.96 0.00 43.77 4.75
454 455 1.516892 GTCCAGAGCTCTCAGCCAG 59.483 63.158 14.96 0.78 43.77 4.85
455 456 2.187424 CCAGAGCTCTCAGCCAGC 59.813 66.667 14.96 0.00 43.77 4.85
459 460 3.301070 AGCTCTCAGCCAGCTCTG 58.699 61.111 0.00 0.00 44.25 3.35
460 461 1.305129 AGCTCTCAGCCAGCTCTGA 60.305 57.895 5.13 5.13 44.25 3.27
466 467 1.565067 TCAGCCAGCTCTGAGATTCA 58.435 50.000 9.28 0.00 38.11 2.57
467 468 2.117051 TCAGCCAGCTCTGAGATTCAT 58.883 47.619 9.28 0.00 38.11 2.57
468 469 2.158943 TCAGCCAGCTCTGAGATTCATG 60.159 50.000 9.28 0.41 38.11 3.07
469 470 0.945813 GCCAGCTCTGAGATTCATGC 59.054 55.000 9.28 0.00 0.00 4.06
470 471 1.218763 CCAGCTCTGAGATTCATGCG 58.781 55.000 9.28 0.00 33.22 4.73
471 472 1.218763 CAGCTCTGAGATTCATGCGG 58.781 55.000 9.28 0.00 33.22 5.69
472 473 0.106335 AGCTCTGAGATTCATGCGGG 59.894 55.000 9.28 0.00 33.22 6.13
473 474 1.505477 GCTCTGAGATTCATGCGGGC 61.505 60.000 9.28 0.00 0.00 6.13
474 475 0.883814 CTCTGAGATTCATGCGGGCC 60.884 60.000 0.00 0.00 0.00 5.80
475 476 1.153107 CTGAGATTCATGCGGGCCA 60.153 57.895 4.39 0.00 0.00 5.36
476 477 1.153107 TGAGATTCATGCGGGCCAG 60.153 57.895 4.39 0.00 0.00 4.85
477 478 1.146930 GAGATTCATGCGGGCCAGA 59.853 57.895 7.23 0.00 0.00 3.86
478 479 0.250640 GAGATTCATGCGGGCCAGAT 60.251 55.000 7.23 0.00 0.00 2.90
479 480 0.184451 AGATTCATGCGGGCCAGATT 59.816 50.000 7.23 0.00 0.00 2.40
480 481 1.035139 GATTCATGCGGGCCAGATTT 58.965 50.000 7.23 0.00 0.00 2.17
481 482 1.410153 GATTCATGCGGGCCAGATTTT 59.590 47.619 7.23 0.00 0.00 1.82
482 483 2.136298 TTCATGCGGGCCAGATTTTA 57.864 45.000 7.23 0.00 0.00 1.52
483 484 1.679139 TCATGCGGGCCAGATTTTAG 58.321 50.000 7.23 0.00 0.00 1.85
484 485 1.211703 TCATGCGGGCCAGATTTTAGA 59.788 47.619 7.23 0.00 0.00 2.10
485 486 2.158623 TCATGCGGGCCAGATTTTAGAT 60.159 45.455 7.23 0.00 0.00 1.98
486 487 1.679139 TGCGGGCCAGATTTTAGATG 58.321 50.000 7.23 0.00 0.00 2.90
487 488 0.312102 GCGGGCCAGATTTTAGATGC 59.688 55.000 7.23 0.00 0.00 3.91
488 489 1.679139 CGGGCCAGATTTTAGATGCA 58.321 50.000 4.39 0.00 0.00 3.96
489 490 1.605710 CGGGCCAGATTTTAGATGCAG 59.394 52.381 4.39 0.00 0.00 4.41
490 491 1.339291 GGGCCAGATTTTAGATGCAGC 59.661 52.381 4.39 0.00 0.00 5.25
491 492 1.339291 GGCCAGATTTTAGATGCAGCC 59.661 52.381 0.00 0.00 0.00 4.85
492 493 1.339291 GCCAGATTTTAGATGCAGCCC 59.661 52.381 0.00 0.00 0.00 5.19
493 494 2.658285 CCAGATTTTAGATGCAGCCCA 58.342 47.619 0.00 0.00 0.00 5.36
494 495 2.621998 CCAGATTTTAGATGCAGCCCAG 59.378 50.000 0.00 0.00 0.00 4.45
495 496 2.621998 CAGATTTTAGATGCAGCCCAGG 59.378 50.000 0.00 0.00 0.00 4.45
496 497 1.339291 GATTTTAGATGCAGCCCAGGC 59.661 52.381 0.00 0.00 42.33 4.85
497 498 0.039472 TTTTAGATGCAGCCCAGGCA 59.961 50.000 12.03 0.00 46.66 4.75
498 499 0.039472 TTTAGATGCAGCCCAGGCAA 59.961 50.000 12.03 0.00 45.60 4.52
499 500 0.680921 TTAGATGCAGCCCAGGCAAC 60.681 55.000 12.03 2.58 45.60 4.17
500 501 2.556840 TAGATGCAGCCCAGGCAACC 62.557 60.000 12.03 0.00 45.60 3.77
501 502 4.304413 ATGCAGCCCAGGCAACCA 62.304 61.111 12.03 4.97 45.60 3.67
502 503 3.831727 ATGCAGCCCAGGCAACCAA 62.832 57.895 12.03 0.00 45.60 3.67
503 504 3.233231 GCAGCCCAGGCAACCAAA 61.233 61.111 12.03 0.00 44.88 3.28
504 505 2.586293 GCAGCCCAGGCAACCAAAT 61.586 57.895 12.03 0.00 44.88 2.32
505 506 1.294138 CAGCCCAGGCAACCAAATG 59.706 57.895 12.03 0.00 44.88 2.32
506 507 1.914764 AGCCCAGGCAACCAAATGG 60.915 57.895 12.03 0.00 44.88 3.16
507 508 2.664398 CCCAGGCAACCAAATGGC 59.336 61.111 0.00 0.00 45.57 4.40
508 509 2.664398 CCAGGCAACCAAATGGCC 59.336 61.111 0.00 0.00 46.33 5.36
511 512 2.664398 GGCAACCAAATGGCCCAG 59.336 61.111 0.00 0.00 41.90 4.45
512 513 2.664398 GCAACCAAATGGCCCAGG 59.336 61.111 0.00 0.00 39.32 4.45
513 514 2.664398 CAACCAAATGGCCCAGGC 59.336 61.111 0.00 0.00 39.32 4.85
523 524 3.521796 GCCCAGGCCGAATTCTGC 61.522 66.667 12.96 12.96 34.56 4.26
524 525 2.045045 CCCAGGCCGAATTCTGCA 60.045 61.111 21.33 0.00 0.00 4.41
525 526 2.409870 CCCAGGCCGAATTCTGCAC 61.410 63.158 21.33 11.84 0.00 4.57
526 527 2.753966 CCAGGCCGAATTCTGCACG 61.754 63.158 21.33 12.11 0.00 5.34
527 528 3.127533 AGGCCGAATTCTGCACGC 61.128 61.111 21.33 6.38 0.00 5.34
528 529 4.179579 GGCCGAATTCTGCACGCC 62.180 66.667 21.33 11.59 0.00 5.68
529 530 4.179579 GCCGAATTCTGCACGCCC 62.180 66.667 16.02 0.00 0.00 6.13
530 531 3.864686 CCGAATTCTGCACGCCCG 61.865 66.667 3.52 0.00 0.00 6.13
531 532 2.813474 CGAATTCTGCACGCCCGA 60.813 61.111 3.52 0.00 0.00 5.14
532 533 2.802667 CGAATTCTGCACGCCCGAG 61.803 63.158 3.52 0.00 0.00 4.63
533 534 3.100862 GAATTCTGCACGCCCGAGC 62.101 63.158 0.00 3.18 0.00 5.03
561 562 3.570912 GGCCTAATACAGCCTACCAAA 57.429 47.619 0.00 0.00 46.14 3.28
562 563 3.211865 GGCCTAATACAGCCTACCAAAC 58.788 50.000 0.00 0.00 46.14 2.93
563 564 2.870411 GCCTAATACAGCCTACCAAACG 59.130 50.000 0.00 0.00 0.00 3.60
564 565 2.870411 CCTAATACAGCCTACCAAACGC 59.130 50.000 0.00 0.00 0.00 4.84
565 566 2.483014 AATACAGCCTACCAAACGCA 57.517 45.000 0.00 0.00 0.00 5.24
566 567 2.710096 ATACAGCCTACCAAACGCAT 57.290 45.000 0.00 0.00 0.00 4.73
567 568 3.830744 ATACAGCCTACCAAACGCATA 57.169 42.857 0.00 0.00 0.00 3.14
568 569 1.734163 ACAGCCTACCAAACGCATAC 58.266 50.000 0.00 0.00 0.00 2.39
579 580 7.431084 CCTACCAAACGCATACATATTGTTTTC 59.569 37.037 0.00 0.00 30.88 2.29
607 608 5.220529 GGATAGATAAACAACCGTTTCACCG 60.221 44.000 0.00 0.00 44.27 4.94
657 658 0.659957 GCCTTCGGAGCTAAGCATTG 59.340 55.000 0.00 0.00 0.00 2.82
661 662 1.372582 TCGGAGCTAAGCATTGCAAG 58.627 50.000 11.91 8.88 0.00 4.01
662 663 1.089920 CGGAGCTAAGCATTGCAAGT 58.910 50.000 11.91 0.00 0.00 3.16
745 748 4.994201 TCGCGTCGACACACAGCC 62.994 66.667 17.16 0.00 0.00 4.85
749 752 2.665185 GTCGACACACAGCCCCAC 60.665 66.667 11.55 0.00 0.00 4.61
876 895 1.125633 GCTATAAAGTCCCGTCCCCA 58.874 55.000 0.00 0.00 0.00 4.96
911 931 4.082408 TCAACATCGTTAGACTCACGGAAT 60.082 41.667 9.19 0.00 38.23 3.01
944 964 1.594194 CTCAGACTCTCAGCAGCGGT 61.594 60.000 0.00 0.00 0.00 5.68
945 965 1.181741 TCAGACTCTCAGCAGCGGTT 61.182 55.000 0.00 0.00 0.00 4.44
969 989 1.521010 TCGTACGCTCCTCTCTCGG 60.521 63.158 11.24 0.00 0.00 4.63
978 998 4.903355 CTCTCTCGGCTCAGCGCG 62.903 72.222 0.00 0.00 40.44 6.86
1102 1125 2.537792 GAACGACCTCGCGACCATCA 62.538 60.000 3.71 0.00 44.43 3.07
1231 1351 7.734942 ATTAACCTGATGGTGAATTTTGTTGT 58.265 30.769 0.00 0.00 43.30 3.32
1399 1519 0.324285 ACTTCAAGCAGCTCCAGGAG 59.676 55.000 12.81 12.81 0.00 3.69
1465 1585 1.795768 CTGAACCGCTGAAGCTTGTA 58.204 50.000 2.10 0.00 39.32 2.41
1479 1599 1.414181 GCTTGTAGCTGGAGCCTATCA 59.586 52.381 0.00 0.00 43.38 2.15
1480 1600 2.158900 GCTTGTAGCTGGAGCCTATCAA 60.159 50.000 0.00 0.00 43.38 2.57
1481 1601 3.682718 GCTTGTAGCTGGAGCCTATCAAA 60.683 47.826 0.00 0.00 43.38 2.69
1482 1602 4.517285 CTTGTAGCTGGAGCCTATCAAAA 58.483 43.478 0.00 0.00 43.38 2.44
1550 1670 1.561076 TGCTTCCTGCCTGATGTGTAT 59.439 47.619 0.00 0.00 42.00 2.29
1551 1671 1.945394 GCTTCCTGCCTGATGTGTATG 59.055 52.381 0.00 0.00 35.15 2.39
1552 1672 2.420547 GCTTCCTGCCTGATGTGTATGA 60.421 50.000 0.00 0.00 35.15 2.15
1553 1673 3.746751 GCTTCCTGCCTGATGTGTATGAT 60.747 47.826 0.00 0.00 35.15 2.45
1600 1720 1.702401 TGCACTTCACCTCCCACATAA 59.298 47.619 0.00 0.00 0.00 1.90
1604 1724 2.233922 ACTTCACCTCCCACATAACTCG 59.766 50.000 0.00 0.00 0.00 4.18
1620 1740 7.063426 CACATAACTCGAAAGCTTGATGTCTTA 59.937 37.037 0.00 0.00 0.00 2.10
1621 1741 7.602644 ACATAACTCGAAAGCTTGATGTCTTAA 59.397 33.333 0.00 0.00 0.00 1.85
1622 1742 8.607459 CATAACTCGAAAGCTTGATGTCTTAAT 58.393 33.333 0.00 0.00 0.00 1.40
1623 1743 9.817809 ATAACTCGAAAGCTTGATGTCTTAATA 57.182 29.630 0.00 0.00 0.00 0.98
1650 1813 8.850156 ACAAGATTGTTAATCACTAAAGCAAGT 58.150 29.630 4.56 0.00 38.47 3.16
1681 1844 4.260170 CCACCTGGAAGAGAGAAATTCAG 58.740 47.826 0.00 0.00 37.39 3.02
1775 2021 7.839680 AACACAAGATTAGAAAAATCCCACT 57.160 32.000 0.00 0.00 0.00 4.00
1802 2048 8.690884 TGGAAGAGAAAATTCACAAATAACACA 58.309 29.630 0.00 0.00 0.00 3.72
1857 2106 0.247736 CCTGGAAGAGTGGAACCTCG 59.752 60.000 0.00 0.00 37.80 4.63
1922 2171 2.490115 GCAACCATGATTTACAACCGGA 59.510 45.455 9.46 0.00 0.00 5.14
2083 2332 6.656693 AGAATTGCTACTACATTGTCAAGCTT 59.343 34.615 15.01 0.00 0.00 3.74
2197 2457 6.153851 TCCTCTAATCTATGGTTTGACGACAA 59.846 38.462 0.00 0.00 0.00 3.18
2207 2467 0.375454 TTGACGACAACGCAAACTGG 59.625 50.000 0.00 0.00 43.96 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.785425 GCCATTTCCACCATCCCGC 61.785 63.158 0.00 0.00 0.00 6.13
1 2 2.127232 GGCCATTTCCACCATCCCG 61.127 63.158 0.00 0.00 0.00 5.14
2 3 0.325577 AAGGCCATTTCCACCATCCC 60.326 55.000 5.01 0.00 0.00 3.85
3 4 1.114627 GAAGGCCATTTCCACCATCC 58.885 55.000 5.01 0.00 0.00 3.51
4 5 1.753073 CAGAAGGCCATTTCCACCATC 59.247 52.381 5.01 0.00 0.00 3.51
5 6 1.077663 ACAGAAGGCCATTTCCACCAT 59.922 47.619 5.01 0.00 0.00 3.55
6 7 0.482446 ACAGAAGGCCATTTCCACCA 59.518 50.000 5.01 0.00 0.00 4.17
7 8 1.546029 GAACAGAAGGCCATTTCCACC 59.454 52.381 5.01 0.00 0.00 4.61
8 9 1.200020 CGAACAGAAGGCCATTTCCAC 59.800 52.381 5.01 0.00 0.00 4.02
9 10 1.073125 TCGAACAGAAGGCCATTTCCA 59.927 47.619 5.01 0.00 0.00 3.53
10 11 1.468914 GTCGAACAGAAGGCCATTTCC 59.531 52.381 5.01 0.00 0.00 3.13
11 12 1.468914 GGTCGAACAGAAGGCCATTTC 59.531 52.381 5.01 0.00 0.00 2.17
12 13 1.534729 GGTCGAACAGAAGGCCATTT 58.465 50.000 5.01 0.00 0.00 2.32
13 14 0.673644 CGGTCGAACAGAAGGCCATT 60.674 55.000 5.01 0.00 0.00 3.16
14 15 1.079127 CGGTCGAACAGAAGGCCAT 60.079 57.895 5.01 0.00 0.00 4.40
15 16 2.342279 CGGTCGAACAGAAGGCCA 59.658 61.111 5.01 0.00 0.00 5.36
16 17 3.119096 GCGGTCGAACAGAAGGCC 61.119 66.667 0.00 0.00 0.00 5.19
17 18 2.221906 TAGGCGGTCGAACAGAAGGC 62.222 60.000 0.00 0.00 35.55 4.35
18 19 0.458025 GTAGGCGGTCGAACAGAAGG 60.458 60.000 0.00 0.00 0.00 3.46
19 20 0.242825 TGTAGGCGGTCGAACAGAAG 59.757 55.000 0.00 0.00 0.00 2.85
20 21 0.242825 CTGTAGGCGGTCGAACAGAA 59.757 55.000 11.24 0.00 41.47 3.02
21 22 0.892358 ACTGTAGGCGGTCGAACAGA 60.892 55.000 20.12 0.00 41.47 3.41
22 23 0.038526 AACTGTAGGCGGTCGAACAG 60.039 55.000 14.07 14.07 43.90 3.16
23 24 1.246649 TAACTGTAGGCGGTCGAACA 58.753 50.000 0.00 0.00 31.99 3.18
24 25 2.352503 TTAACTGTAGGCGGTCGAAC 57.647 50.000 0.00 0.00 31.99 3.95
25 26 3.059166 GTTTTAACTGTAGGCGGTCGAA 58.941 45.455 0.00 0.00 31.99 3.71
26 27 2.035704 TGTTTTAACTGTAGGCGGTCGA 59.964 45.455 0.00 0.00 31.99 4.20
27 28 2.406130 TGTTTTAACTGTAGGCGGTCG 58.594 47.619 0.00 0.00 31.99 4.79
28 29 2.740447 CCTGTTTTAACTGTAGGCGGTC 59.260 50.000 0.00 0.00 31.99 4.79
29 30 2.369532 TCCTGTTTTAACTGTAGGCGGT 59.630 45.455 0.00 0.00 35.32 5.68
30 31 3.048337 TCCTGTTTTAACTGTAGGCGG 57.952 47.619 0.00 0.00 0.00 6.13
31 32 4.250464 TGATCCTGTTTTAACTGTAGGCG 58.750 43.478 0.00 0.00 0.00 5.52
32 33 5.648092 ACATGATCCTGTTTTAACTGTAGGC 59.352 40.000 0.00 0.00 0.00 3.93
33 34 7.390440 TGAACATGATCCTGTTTTAACTGTAGG 59.610 37.037 16.21 0.00 39.40 3.18
34 35 8.230486 GTGAACATGATCCTGTTTTAACTGTAG 58.770 37.037 16.21 0.00 39.40 2.74
35 36 7.936847 AGTGAACATGATCCTGTTTTAACTGTA 59.063 33.333 16.21 0.00 39.40 2.74
36 37 6.772716 AGTGAACATGATCCTGTTTTAACTGT 59.227 34.615 16.21 0.00 39.40 3.55
37 38 7.080099 CAGTGAACATGATCCTGTTTTAACTG 58.920 38.462 23.99 23.99 39.40 3.16
38 39 6.207417 CCAGTGAACATGATCCTGTTTTAACT 59.793 38.462 16.21 15.82 39.40 2.24
39 40 6.381801 CCAGTGAACATGATCCTGTTTTAAC 58.618 40.000 16.21 14.27 39.40 2.01
40 41 5.476599 CCCAGTGAACATGATCCTGTTTTAA 59.523 40.000 16.21 4.75 39.40 1.52
41 42 5.009631 CCCAGTGAACATGATCCTGTTTTA 58.990 41.667 16.21 7.51 39.40 1.52
42 43 3.828451 CCCAGTGAACATGATCCTGTTTT 59.172 43.478 16.21 4.74 39.40 2.43
43 44 3.074390 TCCCAGTGAACATGATCCTGTTT 59.926 43.478 16.21 0.02 39.40 2.83
44 45 2.644299 TCCCAGTGAACATGATCCTGTT 59.356 45.455 15.23 15.23 41.92 3.16
45 46 2.238144 CTCCCAGTGAACATGATCCTGT 59.762 50.000 15.34 0.00 0.00 4.00
46 47 2.421107 CCTCCCAGTGAACATGATCCTG 60.421 54.545 0.00 7.06 0.00 3.86
47 48 1.842562 CCTCCCAGTGAACATGATCCT 59.157 52.381 0.00 0.00 0.00 3.24
48 49 1.133976 CCCTCCCAGTGAACATGATCC 60.134 57.143 0.00 0.00 0.00 3.36
49 50 1.133976 CCCCTCCCAGTGAACATGATC 60.134 57.143 0.00 0.00 0.00 2.92
50 51 0.921896 CCCCTCCCAGTGAACATGAT 59.078 55.000 0.00 0.00 0.00 2.45
51 52 0.475632 ACCCCTCCCAGTGAACATGA 60.476 55.000 0.00 0.00 0.00 3.07
52 53 0.035056 GACCCCTCCCAGTGAACATG 60.035 60.000 0.00 0.00 0.00 3.21
53 54 0.178861 AGACCCCTCCCAGTGAACAT 60.179 55.000 0.00 0.00 0.00 2.71
54 55 1.127567 CAGACCCCTCCCAGTGAACA 61.128 60.000 0.00 0.00 0.00 3.18
55 56 1.679898 CAGACCCCTCCCAGTGAAC 59.320 63.158 0.00 0.00 0.00 3.18
56 57 1.538876 CCAGACCCCTCCCAGTGAA 60.539 63.158 0.00 0.00 0.00 3.18
57 58 2.122729 CCAGACCCCTCCCAGTGA 59.877 66.667 0.00 0.00 0.00 3.41
58 59 3.721706 GCCAGACCCCTCCCAGTG 61.722 72.222 0.00 0.00 0.00 3.66
60 61 3.976490 TACGCCAGACCCCTCCCAG 62.976 68.421 0.00 0.00 0.00 4.45
61 62 4.000620 TACGCCAGACCCCTCCCA 62.001 66.667 0.00 0.00 0.00 4.37
62 63 3.468140 GTACGCCAGACCCCTCCC 61.468 72.222 0.00 0.00 0.00 4.30
63 64 3.468140 GGTACGCCAGACCCCTCC 61.468 72.222 0.00 0.00 34.09 4.30
76 77 3.978855 GTGTTTCCTTCATTTTGCGGTAC 59.021 43.478 0.00 0.00 0.00 3.34
77 78 3.004944 GGTGTTTCCTTCATTTTGCGGTA 59.995 43.478 0.00 0.00 0.00 4.02
78 79 2.223947 GGTGTTTCCTTCATTTTGCGGT 60.224 45.455 0.00 0.00 0.00 5.68
79 80 2.403259 GGTGTTTCCTTCATTTTGCGG 58.597 47.619 0.00 0.00 0.00 5.69
80 81 2.403259 GGGTGTTTCCTTCATTTTGCG 58.597 47.619 0.00 0.00 36.25 4.85
81 82 2.766313 GGGGTGTTTCCTTCATTTTGC 58.234 47.619 0.00 0.00 36.25 3.68
82 83 2.364002 ACGGGGTGTTTCCTTCATTTTG 59.636 45.455 0.00 0.00 36.25 2.44
83 84 2.673258 ACGGGGTGTTTCCTTCATTTT 58.327 42.857 0.00 0.00 36.25 1.82
84 85 2.375014 ACGGGGTGTTTCCTTCATTT 57.625 45.000 0.00 0.00 36.25 2.32
85 86 2.375014 AACGGGGTGTTTCCTTCATT 57.625 45.000 0.00 0.00 37.59 2.57
94 95 0.549469 AACAGGAGAAACGGGGTGTT 59.451 50.000 0.00 0.00 44.59 3.32
95 96 0.179029 CAACAGGAGAAACGGGGTGT 60.179 55.000 0.00 0.00 0.00 4.16
96 97 0.107831 TCAACAGGAGAAACGGGGTG 59.892 55.000 0.00 0.00 0.00 4.61
97 98 1.003233 GATCAACAGGAGAAACGGGGT 59.997 52.381 0.00 0.00 0.00 4.95
98 99 1.739067 GATCAACAGGAGAAACGGGG 58.261 55.000 0.00 0.00 0.00 5.73
99 100 1.359848 CGATCAACAGGAGAAACGGG 58.640 55.000 0.00 0.00 0.00 5.28
100 101 1.359848 CCGATCAACAGGAGAAACGG 58.640 55.000 0.00 0.00 34.62 4.44
101 102 1.067142 TCCCGATCAACAGGAGAAACG 60.067 52.381 0.00 0.00 0.00 3.60
102 103 2.762535 TCCCGATCAACAGGAGAAAC 57.237 50.000 0.00 0.00 0.00 2.78
106 107 1.690219 CCCCTCCCGATCAACAGGAG 61.690 65.000 9.92 9.92 45.72 3.69
107 108 1.689233 CCCCTCCCGATCAACAGGA 60.689 63.158 2.93 0.00 0.00 3.86
108 109 1.995626 ACCCCTCCCGATCAACAGG 60.996 63.158 0.00 0.00 0.00 4.00
109 110 1.221840 CACCCCTCCCGATCAACAG 59.778 63.158 0.00 0.00 0.00 3.16
110 111 1.537889 ACACCCCTCCCGATCAACA 60.538 57.895 0.00 0.00 0.00 3.33
111 112 1.078426 CACACCCCTCCCGATCAAC 60.078 63.158 0.00 0.00 0.00 3.18
112 113 2.297895 CCACACCCCTCCCGATCAA 61.298 63.158 0.00 0.00 0.00 2.57
113 114 2.687200 CCACACCCCTCCCGATCA 60.687 66.667 0.00 0.00 0.00 2.92
114 115 4.176752 GCCACACCCCTCCCGATC 62.177 72.222 0.00 0.00 0.00 3.69
118 119 4.091939 GTACGCCACACCCCTCCC 62.092 72.222 0.00 0.00 0.00 4.30
119 120 4.091939 GGTACGCCACACCCCTCC 62.092 72.222 0.00 0.00 34.09 4.30
120 121 3.315949 TGGTACGCCACACCCCTC 61.316 66.667 0.00 0.00 40.46 4.30
136 137 2.884639 AGTCCGTTTCCTCCATTTTGTG 59.115 45.455 0.00 0.00 0.00 3.33
137 138 3.223674 AGTCCGTTTCCTCCATTTTGT 57.776 42.857 0.00 0.00 0.00 2.83
138 139 3.821033 AGAAGTCCGTTTCCTCCATTTTG 59.179 43.478 0.00 0.00 0.00 2.44
139 140 4.072839 GAGAAGTCCGTTTCCTCCATTTT 58.927 43.478 0.00 0.00 0.00 1.82
140 141 3.328050 AGAGAAGTCCGTTTCCTCCATTT 59.672 43.478 0.00 0.00 0.00 2.32
141 142 2.907042 AGAGAAGTCCGTTTCCTCCATT 59.093 45.455 0.00 0.00 0.00 3.16
142 143 2.541466 AGAGAAGTCCGTTTCCTCCAT 58.459 47.619 0.00 0.00 0.00 3.41
143 144 2.011122 AGAGAAGTCCGTTTCCTCCA 57.989 50.000 0.00 0.00 0.00 3.86
144 145 2.671632 CGAAGAGAAGTCCGTTTCCTCC 60.672 54.545 0.00 0.00 0.00 4.30
145 146 2.228343 TCGAAGAGAAGTCCGTTTCCTC 59.772 50.000 0.00 0.00 0.00 3.71
146 147 2.030096 GTCGAAGAGAAGTCCGTTTCCT 60.030 50.000 0.00 0.00 36.95 3.36
147 148 2.326664 GTCGAAGAGAAGTCCGTTTCC 58.673 52.381 0.00 0.00 36.95 3.13
148 149 2.030096 AGGTCGAAGAGAAGTCCGTTTC 60.030 50.000 0.00 0.00 36.95 2.78
149 150 1.962100 AGGTCGAAGAGAAGTCCGTTT 59.038 47.619 0.00 0.00 36.95 3.60
150 151 1.540707 GAGGTCGAAGAGAAGTCCGTT 59.459 52.381 0.00 0.00 36.95 4.44
151 152 1.166989 GAGGTCGAAGAGAAGTCCGT 58.833 55.000 0.00 0.00 36.95 4.69
152 153 0.452585 GGAGGTCGAAGAGAAGTCCG 59.547 60.000 0.00 0.00 36.95 4.79
153 154 1.842052 AGGAGGTCGAAGAGAAGTCC 58.158 55.000 0.00 0.00 36.95 3.85
154 155 2.352342 CGTAGGAGGTCGAAGAGAAGTC 59.648 54.545 0.00 0.00 36.95 3.01
155 156 2.358015 CGTAGGAGGTCGAAGAGAAGT 58.642 52.381 0.00 0.00 36.95 3.01
171 172 1.475280 TGATCCCTGTTTCGACCGTAG 59.525 52.381 0.00 0.00 0.00 3.51
172 173 1.548081 TGATCCCTGTTTCGACCGTA 58.452 50.000 0.00 0.00 0.00 4.02
173 174 0.902531 ATGATCCCTGTTTCGACCGT 59.097 50.000 0.00 0.00 0.00 4.83
174 175 1.290203 CATGATCCCTGTTTCGACCG 58.710 55.000 0.00 0.00 0.00 4.79
175 176 2.403252 ACATGATCCCTGTTTCGACC 57.597 50.000 0.00 0.00 0.00 4.79
176 177 3.334691 TGAACATGATCCCTGTTTCGAC 58.665 45.455 0.00 1.72 36.98 4.20
177 178 3.694043 TGAACATGATCCCTGTTTCGA 57.306 42.857 0.00 0.00 36.98 3.71
178 179 3.001634 CGATGAACATGATCCCTGTTTCG 59.998 47.826 0.00 12.33 36.98 3.46
179 180 3.313526 CCGATGAACATGATCCCTGTTTC 59.686 47.826 0.00 6.21 36.98 2.78
180 181 3.282021 CCGATGAACATGATCCCTGTTT 58.718 45.455 0.00 0.00 36.98 2.83
181 182 2.421952 CCCGATGAACATGATCCCTGTT 60.422 50.000 9.76 9.76 39.46 3.16
182 183 1.141657 CCCGATGAACATGATCCCTGT 59.858 52.381 0.00 0.00 0.00 4.00
183 184 1.417517 TCCCGATGAACATGATCCCTG 59.582 52.381 0.00 0.00 0.00 4.45
184 185 1.696336 CTCCCGATGAACATGATCCCT 59.304 52.381 0.00 0.00 0.00 4.20
185 186 1.271054 CCTCCCGATGAACATGATCCC 60.271 57.143 0.00 0.00 0.00 3.85
186 187 1.271054 CCCTCCCGATGAACATGATCC 60.271 57.143 0.00 0.00 0.00 3.36
187 188 1.271054 CCCCTCCCGATGAACATGATC 60.271 57.143 0.00 0.00 0.00 2.92
188 189 0.767375 CCCCTCCCGATGAACATGAT 59.233 55.000 0.00 0.00 0.00 2.45
189 190 0.620410 ACCCCTCCCGATGAACATGA 60.620 55.000 0.00 0.00 0.00 3.07
190 191 0.464373 CACCCCTCCCGATGAACATG 60.464 60.000 0.00 0.00 0.00 3.21
191 192 0.914417 ACACCCCTCCCGATGAACAT 60.914 55.000 0.00 0.00 0.00 2.71
192 193 1.537889 ACACCCCTCCCGATGAACA 60.538 57.895 0.00 0.00 0.00 3.18
193 194 1.078426 CACACCCCTCCCGATGAAC 60.078 63.158 0.00 0.00 0.00 3.18
194 195 2.297895 CCACACCCCTCCCGATGAA 61.298 63.158 0.00 0.00 0.00 2.57
195 196 2.687200 CCACACCCCTCCCGATGA 60.687 66.667 0.00 0.00 0.00 2.92
196 197 4.489771 GCCACACCCCTCCCGATG 62.490 72.222 0.00 0.00 0.00 3.84
197 198 4.741239 AGCCACACCCCTCCCGAT 62.741 66.667 0.00 0.00 0.00 4.18
200 201 4.035102 GTGAGCCACACCCCTCCC 62.035 72.222 0.85 0.00 43.05 4.30
208 209 2.607457 CGTTTTACGGTGAGCCACA 58.393 52.632 7.49 0.00 38.08 4.17
218 219 0.785979 CCGTGAAGTCCCGTTTTACG 59.214 55.000 0.00 0.00 42.11 3.18
219 220 1.150827 CCCGTGAAGTCCCGTTTTAC 58.849 55.000 0.00 0.00 0.00 2.01
220 221 0.603439 GCCCGTGAAGTCCCGTTTTA 60.603 55.000 0.00 0.00 0.00 1.52
221 222 1.895231 GCCCGTGAAGTCCCGTTTT 60.895 57.895 0.00 0.00 0.00 2.43
222 223 2.281276 GCCCGTGAAGTCCCGTTT 60.281 61.111 0.00 0.00 0.00 3.60
223 224 3.239253 AGCCCGTGAAGTCCCGTT 61.239 61.111 0.00 0.00 0.00 4.44
224 225 4.003788 CAGCCCGTGAAGTCCCGT 62.004 66.667 0.00 0.00 0.00 5.28
244 245 2.543802 TAGAGTCGCCATCTCGCCG 61.544 63.158 0.00 0.00 37.07 6.46
245 246 1.008309 GTAGAGTCGCCATCTCGCC 60.008 63.158 0.00 0.00 37.07 5.54
246 247 1.008309 GGTAGAGTCGCCATCTCGC 60.008 63.158 2.48 0.00 37.07 5.03
247 248 0.955178 ATGGTAGAGTCGCCATCTCG 59.045 55.000 14.09 0.00 41.24 4.04
252 253 1.077285 TCCGATGGTAGAGTCGCCA 60.077 57.895 11.05 11.05 39.33 5.69
253 254 0.818445 TCTCCGATGGTAGAGTCGCC 60.818 60.000 0.53 0.53 36.57 5.54
254 255 1.022735 TTCTCCGATGGTAGAGTCGC 58.977 55.000 0.00 0.00 36.57 5.19
255 256 2.223525 GGTTTCTCCGATGGTAGAGTCG 60.224 54.545 0.00 0.00 37.58 4.18
256 257 3.439895 GGTTTCTCCGATGGTAGAGTC 57.560 52.381 0.00 0.00 0.00 3.36
268 269 2.112815 CCGCCCATTCGGTTTCTCC 61.113 63.158 0.00 0.00 44.18 3.71
269 270 3.497879 CCGCCCATTCGGTTTCTC 58.502 61.111 0.00 0.00 44.18 2.87
277 278 4.467084 TCGCCTCACCGCCCATTC 62.467 66.667 0.00 0.00 0.00 2.67
278 279 4.473520 CTCGCCTCACCGCCCATT 62.474 66.667 0.00 0.00 0.00 3.16
285 286 3.151022 CTCCCCTCTCGCCTCACC 61.151 72.222 0.00 0.00 0.00 4.02
286 287 2.043852 TCTCCCCTCTCGCCTCAC 60.044 66.667 0.00 0.00 0.00 3.51
287 288 2.043852 GTCTCCCCTCTCGCCTCA 60.044 66.667 0.00 0.00 0.00 3.86
288 289 2.043852 TGTCTCCCCTCTCGCCTC 60.044 66.667 0.00 0.00 0.00 4.70
289 290 2.043450 CTGTCTCCCCTCTCGCCT 60.043 66.667 0.00 0.00 0.00 5.52
290 291 2.363147 ACTGTCTCCCCTCTCGCC 60.363 66.667 0.00 0.00 0.00 5.54
291 292 2.888863 CACTGTCTCCCCTCTCGC 59.111 66.667 0.00 0.00 0.00 5.03
292 293 2.888863 GCACTGTCTCCCCTCTCG 59.111 66.667 0.00 0.00 0.00 4.04
293 294 1.979693 ACGCACTGTCTCCCCTCTC 60.980 63.158 0.00 0.00 0.00 3.20
294 295 2.118513 ACGCACTGTCTCCCCTCT 59.881 61.111 0.00 0.00 0.00 3.69
295 296 2.262915 CACGCACTGTCTCCCCTC 59.737 66.667 0.00 0.00 0.00 4.30
296 297 4.008933 GCACGCACTGTCTCCCCT 62.009 66.667 0.00 0.00 0.00 4.79
298 299 3.858868 TTCGCACGCACTGTCTCCC 62.859 63.158 0.00 0.00 0.00 4.30
299 300 1.291877 AATTCGCACGCACTGTCTCC 61.292 55.000 0.00 0.00 0.00 3.71
300 301 0.179240 CAATTCGCACGCACTGTCTC 60.179 55.000 0.00 0.00 0.00 3.36
301 302 0.880278 ACAATTCGCACGCACTGTCT 60.880 50.000 0.00 0.00 0.00 3.41
302 303 0.451135 GACAATTCGCACGCACTGTC 60.451 55.000 0.00 0.00 0.00 3.51
303 304 1.569493 GACAATTCGCACGCACTGT 59.431 52.632 0.00 0.00 0.00 3.55
304 305 1.507713 CGACAATTCGCACGCACTG 60.508 57.895 0.00 0.00 38.71 3.66
305 306 1.617755 CTCGACAATTCGCACGCACT 61.618 55.000 0.00 0.00 45.46 4.40
306 307 1.225475 CTCGACAATTCGCACGCAC 60.225 57.895 0.00 0.00 45.46 5.34
307 308 1.663388 ACTCGACAATTCGCACGCA 60.663 52.632 0.00 0.00 45.46 5.24
308 309 1.225475 CACTCGACAATTCGCACGC 60.225 57.895 0.00 0.00 45.46 5.34
309 310 0.179275 CACACTCGACAATTCGCACG 60.179 55.000 0.00 0.00 45.46 5.34
310 311 0.163788 CCACACTCGACAATTCGCAC 59.836 55.000 0.00 0.00 45.46 5.34
311 312 0.249699 ACCACACTCGACAATTCGCA 60.250 50.000 0.00 0.00 45.46 5.10
312 313 0.163788 CACCACACTCGACAATTCGC 59.836 55.000 0.00 0.00 45.46 4.70
314 315 3.667960 GCAATCACCACACTCGACAATTC 60.668 47.826 0.00 0.00 0.00 2.17
315 316 2.226437 GCAATCACCACACTCGACAATT 59.774 45.455 0.00 0.00 0.00 2.32
316 317 1.806542 GCAATCACCACACTCGACAAT 59.193 47.619 0.00 0.00 0.00 2.71
317 318 1.225855 GCAATCACCACACTCGACAA 58.774 50.000 0.00 0.00 0.00 3.18
318 319 0.105778 TGCAATCACCACACTCGACA 59.894 50.000 0.00 0.00 0.00 4.35
319 320 1.195448 CTTGCAATCACCACACTCGAC 59.805 52.381 0.00 0.00 0.00 4.20
320 321 1.511850 CTTGCAATCACCACACTCGA 58.488 50.000 0.00 0.00 0.00 4.04
321 322 0.518636 CCTTGCAATCACCACACTCG 59.481 55.000 0.00 0.00 0.00 4.18
322 323 1.808945 CTCCTTGCAATCACCACACTC 59.191 52.381 0.00 0.00 0.00 3.51
323 324 1.901591 CTCCTTGCAATCACCACACT 58.098 50.000 0.00 0.00 0.00 3.55
324 325 0.242017 GCTCCTTGCAATCACCACAC 59.758 55.000 0.00 0.00 42.31 3.82
325 326 2.644887 GCTCCTTGCAATCACCACA 58.355 52.632 0.00 0.00 42.31 4.17
335 336 2.234908 TCTAACTCTCCTTGCTCCTTGC 59.765 50.000 0.00 0.00 43.25 4.01
336 337 3.766591 TCTCTAACTCTCCTTGCTCCTTG 59.233 47.826 0.00 0.00 0.00 3.61
337 338 3.767131 GTCTCTAACTCTCCTTGCTCCTT 59.233 47.826 0.00 0.00 0.00 3.36
338 339 3.361786 GTCTCTAACTCTCCTTGCTCCT 58.638 50.000 0.00 0.00 0.00 3.69
339 340 2.098443 CGTCTCTAACTCTCCTTGCTCC 59.902 54.545 0.00 0.00 0.00 4.70
340 341 2.750712 ACGTCTCTAACTCTCCTTGCTC 59.249 50.000 0.00 0.00 0.00 4.26
341 342 2.750712 GACGTCTCTAACTCTCCTTGCT 59.249 50.000 8.70 0.00 0.00 3.91
342 343 2.488545 TGACGTCTCTAACTCTCCTTGC 59.511 50.000 17.92 0.00 0.00 4.01
343 344 4.156922 ACATGACGTCTCTAACTCTCCTTG 59.843 45.833 17.92 0.00 0.00 3.61
344 345 4.337145 ACATGACGTCTCTAACTCTCCTT 58.663 43.478 17.92 0.00 0.00 3.36
345 346 3.942748 GACATGACGTCTCTAACTCTCCT 59.057 47.826 17.92 0.00 41.81 3.69
346 347 3.242478 CGACATGACGTCTCTAACTCTCC 60.242 52.174 17.92 0.00 42.98 3.71
347 348 3.371591 ACGACATGACGTCTCTAACTCTC 59.628 47.826 17.30 0.00 43.02 3.20
348 349 3.336468 ACGACATGACGTCTCTAACTCT 58.664 45.455 17.30 0.00 43.02 3.24
349 350 3.743567 ACGACATGACGTCTCTAACTC 57.256 47.619 17.30 2.13 43.02 3.01
377 378 3.512516 GAGCCATGCGTGGGAAGC 61.513 66.667 26.22 11.70 46.14 3.86
378 379 3.197790 CGAGCCATGCGTGGGAAG 61.198 66.667 26.22 1.07 46.14 3.46
379 380 3.664025 CTCGAGCCATGCGTGGGAA 62.664 63.158 26.22 0.37 46.14 3.97
380 381 4.147449 CTCGAGCCATGCGTGGGA 62.147 66.667 26.22 13.89 46.14 4.37
386 387 2.959071 GTCTCGCTCGAGCCATGC 60.959 66.667 30.66 15.30 41.71 4.06
387 388 1.588403 CTGTCTCGCTCGAGCCATG 60.588 63.158 30.66 19.98 41.71 3.66
388 389 1.750780 TCTGTCTCGCTCGAGCCAT 60.751 57.895 30.66 0.00 41.71 4.40
389 390 2.359975 TCTGTCTCGCTCGAGCCA 60.360 61.111 30.66 20.90 41.71 4.75
390 391 2.101380 GTCTGTCTCGCTCGAGCC 59.899 66.667 30.66 17.37 41.71 4.70
391 392 1.061887 GAGTCTGTCTCGCTCGAGC 59.938 63.158 27.64 27.64 41.71 5.03
392 393 1.083489 AAGAGTCTGTCTCGCTCGAG 58.917 55.000 8.45 8.45 46.86 4.04
393 394 2.381725 TAAGAGTCTGTCTCGCTCGA 57.618 50.000 0.00 0.00 46.86 4.04
394 395 3.473093 TTTAAGAGTCTGTCTCGCTCG 57.527 47.619 0.00 0.00 46.86 5.03
395 396 6.713792 AATTTTTAAGAGTCTGTCTCGCTC 57.286 37.500 0.00 0.00 46.86 5.03
396 397 6.566753 GCAAATTTTTAAGAGTCTGTCTCGCT 60.567 38.462 0.00 0.00 46.86 4.93
397 398 5.565638 GCAAATTTTTAAGAGTCTGTCTCGC 59.434 40.000 0.00 0.00 46.86 5.03
398 399 6.080406 GGCAAATTTTTAAGAGTCTGTCTCG 58.920 40.000 0.00 0.00 46.86 4.04
399 400 6.073222 TCGGCAAATTTTTAAGAGTCTGTCTC 60.073 38.462 0.00 0.00 43.05 3.36
400 401 5.763204 TCGGCAAATTTTTAAGAGTCTGTCT 59.237 36.000 0.00 0.00 36.94 3.41
401 402 5.997385 TCGGCAAATTTTTAAGAGTCTGTC 58.003 37.500 0.00 0.00 0.00 3.51
402 403 6.575162 ATCGGCAAATTTTTAAGAGTCTGT 57.425 33.333 0.00 0.00 0.00 3.41
403 404 6.249260 CGAATCGGCAAATTTTTAAGAGTCTG 59.751 38.462 0.00 0.00 0.00 3.51
404 405 6.314784 CGAATCGGCAAATTTTTAAGAGTCT 58.685 36.000 0.00 0.00 0.00 3.24
405 406 5.511729 CCGAATCGGCAAATTTTTAAGAGTC 59.488 40.000 9.39 0.00 41.17 3.36
406 407 5.399013 CCGAATCGGCAAATTTTTAAGAGT 58.601 37.500 9.39 0.00 41.17 3.24
407 408 5.932021 CCGAATCGGCAAATTTTTAAGAG 57.068 39.130 9.39 0.00 41.17 2.85
422 423 3.252484 GGACGAACGGCCGAATCG 61.252 66.667 37.32 37.32 42.05 3.34
428 429 3.991536 GAGCTCTGGACGAACGGCC 62.992 68.421 12.54 12.54 45.60 6.13
429 430 2.507324 GAGCTCTGGACGAACGGC 60.507 66.667 6.43 0.00 0.00 5.68
430 431 1.137825 GAGAGCTCTGGACGAACGG 59.862 63.158 23.91 0.00 0.00 4.44
431 432 0.179176 CTGAGAGCTCTGGACGAACG 60.179 60.000 23.91 0.00 0.00 3.95
432 433 0.457681 GCTGAGAGCTCTGGACGAAC 60.458 60.000 23.91 5.05 38.45 3.95
433 434 1.599606 GGCTGAGAGCTCTGGACGAA 61.600 60.000 23.91 0.00 41.99 3.85
434 435 2.049185 GGCTGAGAGCTCTGGACGA 61.049 63.158 23.91 0.00 41.99 4.20
435 436 2.282147 CTGGCTGAGAGCTCTGGACG 62.282 65.000 23.91 7.36 41.99 4.79
436 437 1.516892 CTGGCTGAGAGCTCTGGAC 59.483 63.158 23.91 16.29 41.99 4.02
437 438 2.357575 GCTGGCTGAGAGCTCTGGA 61.358 63.158 23.91 6.41 41.99 3.86
438 439 2.187424 GCTGGCTGAGAGCTCTGG 59.813 66.667 23.91 14.65 41.99 3.86
439 440 3.301070 AGCTGGCTGAGAGCTCTG 58.699 61.111 23.91 9.06 43.54 3.35
443 444 3.296851 TCAGAGCTGGCTGAGAGC 58.703 61.111 0.00 0.00 39.84 4.09
447 448 1.565067 TGAATCTCAGAGCTGGCTGA 58.435 50.000 0.00 5.13 42.31 4.26
448 449 2.214347 CATGAATCTCAGAGCTGGCTG 58.786 52.381 0.00 0.00 37.24 4.85
449 450 1.475392 GCATGAATCTCAGAGCTGGCT 60.475 52.381 0.00 0.00 31.33 4.75
450 451 0.945813 GCATGAATCTCAGAGCTGGC 59.054 55.000 0.00 0.00 31.33 4.85
451 452 1.218763 CGCATGAATCTCAGAGCTGG 58.781 55.000 0.00 0.00 31.68 4.85
452 453 1.218763 CCGCATGAATCTCAGAGCTG 58.781 55.000 0.00 0.00 31.68 4.24
453 454 0.106335 CCCGCATGAATCTCAGAGCT 59.894 55.000 0.00 0.00 31.68 4.09
454 455 1.505477 GCCCGCATGAATCTCAGAGC 61.505 60.000 0.00 0.00 0.00 4.09
455 456 0.883814 GGCCCGCATGAATCTCAGAG 60.884 60.000 0.00 0.00 0.00 3.35
456 457 1.146930 GGCCCGCATGAATCTCAGA 59.853 57.895 0.00 0.00 0.00 3.27
457 458 1.153107 TGGCCCGCATGAATCTCAG 60.153 57.895 0.00 0.00 0.00 3.35
458 459 1.153107 CTGGCCCGCATGAATCTCA 60.153 57.895 0.00 0.00 0.00 3.27
459 460 0.250640 ATCTGGCCCGCATGAATCTC 60.251 55.000 0.00 0.00 0.00 2.75
460 461 0.184451 AATCTGGCCCGCATGAATCT 59.816 50.000 0.00 0.00 0.00 2.40
461 462 1.035139 AAATCTGGCCCGCATGAATC 58.965 50.000 0.00 0.00 0.00 2.52
462 463 1.488390 AAAATCTGGCCCGCATGAAT 58.512 45.000 0.00 0.00 0.00 2.57
463 464 2.023673 CTAAAATCTGGCCCGCATGAA 58.976 47.619 0.00 0.00 0.00 2.57
464 465 1.211703 TCTAAAATCTGGCCCGCATGA 59.788 47.619 0.00 0.00 0.00 3.07
465 466 1.679139 TCTAAAATCTGGCCCGCATG 58.321 50.000 0.00 0.00 0.00 4.06
466 467 2.233271 CATCTAAAATCTGGCCCGCAT 58.767 47.619 0.00 0.00 0.00 4.73
467 468 1.679139 CATCTAAAATCTGGCCCGCA 58.321 50.000 0.00 0.00 0.00 5.69
468 469 0.312102 GCATCTAAAATCTGGCCCGC 59.688 55.000 0.00 0.00 0.00 6.13
469 470 1.605710 CTGCATCTAAAATCTGGCCCG 59.394 52.381 0.00 0.00 0.00 6.13
470 471 1.339291 GCTGCATCTAAAATCTGGCCC 59.661 52.381 0.00 0.00 0.00 5.80
471 472 1.339291 GGCTGCATCTAAAATCTGGCC 59.661 52.381 0.50 0.00 0.00 5.36
472 473 1.339291 GGGCTGCATCTAAAATCTGGC 59.661 52.381 0.50 0.00 0.00 4.85
473 474 2.621998 CTGGGCTGCATCTAAAATCTGG 59.378 50.000 0.50 0.00 0.00 3.86
474 475 2.621998 CCTGGGCTGCATCTAAAATCTG 59.378 50.000 0.50 0.00 0.00 2.90
475 476 2.941480 CCTGGGCTGCATCTAAAATCT 58.059 47.619 0.50 0.00 0.00 2.40
476 477 1.339291 GCCTGGGCTGCATCTAAAATC 59.661 52.381 0.50 0.00 38.26 2.17
477 478 1.342275 TGCCTGGGCTGCATCTAAAAT 60.342 47.619 13.05 0.00 42.51 1.82
478 479 0.039472 TGCCTGGGCTGCATCTAAAA 59.961 50.000 13.05 0.00 42.51 1.52
479 480 0.039472 TTGCCTGGGCTGCATCTAAA 59.961 50.000 13.05 0.00 42.51 1.85
480 481 0.680921 GTTGCCTGGGCTGCATCTAA 60.681 55.000 13.05 0.00 42.51 2.10
481 482 1.077501 GTTGCCTGGGCTGCATCTA 60.078 57.895 13.05 0.00 42.51 1.98
482 483 2.362120 GTTGCCTGGGCTGCATCT 60.362 61.111 13.05 0.00 42.51 2.90
483 484 3.455469 GGTTGCCTGGGCTGCATC 61.455 66.667 13.05 0.00 42.51 3.91
484 485 3.831727 TTGGTTGCCTGGGCTGCAT 62.832 57.895 13.05 0.00 42.51 3.96
485 486 4.536526 TTGGTTGCCTGGGCTGCA 62.537 61.111 13.05 0.00 42.51 4.41
486 487 2.586293 ATTTGGTTGCCTGGGCTGC 61.586 57.895 13.05 5.46 42.51 5.25
487 488 1.294138 CATTTGGTTGCCTGGGCTG 59.706 57.895 13.05 0.00 42.51 4.85
488 489 1.914764 CCATTTGGTTGCCTGGGCT 60.915 57.895 13.05 0.00 42.51 5.19
489 490 2.664398 CCATTTGGTTGCCTGGGC 59.336 61.111 4.43 4.43 42.35 5.36
490 491 2.664398 GCCATTTGGTTGCCTGGG 59.336 61.111 0.00 0.00 37.57 4.45
491 492 2.664398 GGCCATTTGGTTGCCTGG 59.336 61.111 0.00 0.00 42.01 4.45
492 493 2.175035 CTGGGCCATTTGGTTGCCTG 62.175 60.000 6.72 0.00 44.71 4.85
493 494 1.914764 CTGGGCCATTTGGTTGCCT 60.915 57.895 6.72 0.00 44.71 4.75
494 495 2.664398 CTGGGCCATTTGGTTGCC 59.336 61.111 6.72 0.00 44.59 4.52
495 496 2.664398 CCTGGGCCATTTGGTTGC 59.336 61.111 6.72 0.00 37.57 4.17
496 497 2.664398 GCCTGGGCCATTTGGTTG 59.336 61.111 6.72 0.00 37.57 3.77
506 507 3.521796 GCAGAATTCGGCCTGGGC 61.522 66.667 18.52 10.75 41.06 5.36
507 508 2.045045 TGCAGAATTCGGCCTGGG 60.045 61.111 24.79 1.09 36.20 4.45
508 509 2.753966 CGTGCAGAATTCGGCCTGG 61.754 63.158 24.79 11.95 36.20 4.45
509 510 2.787249 CGTGCAGAATTCGGCCTG 59.213 61.111 24.79 14.68 36.20 4.85
510 511 3.127533 GCGTGCAGAATTCGGCCT 61.128 61.111 24.79 0.00 36.20 5.19
511 512 4.179579 GGCGTGCAGAATTCGGCC 62.180 66.667 24.79 16.89 42.65 6.13
512 513 4.179579 GGGCGTGCAGAATTCGGC 62.180 66.667 21.80 21.80 46.46 5.54
513 514 3.864686 CGGGCGTGCAGAATTCGG 61.865 66.667 0.69 0.69 0.00 4.30
514 515 2.802667 CTCGGGCGTGCAGAATTCG 61.803 63.158 0.00 0.00 0.00 3.34
515 516 3.093278 CTCGGGCGTGCAGAATTC 58.907 61.111 0.00 0.00 0.00 2.17
516 517 3.127533 GCTCGGGCGTGCAGAATT 61.128 61.111 0.00 0.00 35.06 2.17
543 544 2.870411 GCGTTTGGTAGGCTGTATTAGG 59.130 50.000 0.00 0.00 34.83 2.69
544 545 3.527533 TGCGTTTGGTAGGCTGTATTAG 58.472 45.455 0.00 0.00 38.45 1.73
545 546 3.613494 TGCGTTTGGTAGGCTGTATTA 57.387 42.857 0.00 0.00 38.45 0.98
546 547 2.483014 TGCGTTTGGTAGGCTGTATT 57.517 45.000 0.00 0.00 38.45 1.89
547 548 2.710096 ATGCGTTTGGTAGGCTGTAT 57.290 45.000 0.00 0.00 38.45 2.29
548 549 2.234168 TGTATGCGTTTGGTAGGCTGTA 59.766 45.455 0.00 0.00 38.45 2.74
549 550 1.002659 TGTATGCGTTTGGTAGGCTGT 59.997 47.619 0.00 0.00 38.45 4.40
550 551 1.732941 TGTATGCGTTTGGTAGGCTG 58.267 50.000 0.00 0.00 38.45 4.85
551 552 2.710096 ATGTATGCGTTTGGTAGGCT 57.290 45.000 0.00 0.00 38.45 4.58
552 553 4.274950 ACAATATGTATGCGTTTGGTAGGC 59.725 41.667 0.00 0.00 38.13 3.93
553 554 6.371809 AACAATATGTATGCGTTTGGTAGG 57.628 37.500 0.00 0.00 0.00 3.18
554 555 7.431084 GGAAAACAATATGTATGCGTTTGGTAG 59.569 37.037 0.00 0.00 30.61 3.18
555 556 7.094334 TGGAAAACAATATGTATGCGTTTGGTA 60.094 33.333 0.00 0.00 30.61 3.25
556 557 6.096695 GGAAAACAATATGTATGCGTTTGGT 58.903 36.000 0.00 0.00 30.61 3.67
557 558 6.096036 TGGAAAACAATATGTATGCGTTTGG 58.904 36.000 0.00 0.00 30.61 3.28
558 559 6.253298 CCTGGAAAACAATATGTATGCGTTTG 59.747 38.462 0.00 0.00 30.61 2.93
559 560 6.329496 CCTGGAAAACAATATGTATGCGTTT 58.671 36.000 0.00 0.00 0.00 3.60
560 561 5.163561 CCCTGGAAAACAATATGTATGCGTT 60.164 40.000 0.00 0.00 0.00 4.84
561 562 4.338118 CCCTGGAAAACAATATGTATGCGT 59.662 41.667 0.00 0.00 0.00 5.24
562 563 4.578516 TCCCTGGAAAACAATATGTATGCG 59.421 41.667 0.00 0.00 0.00 4.73
563 564 6.655078 ATCCCTGGAAAACAATATGTATGC 57.345 37.500 0.00 0.00 0.00 3.14
564 565 9.745018 ATCTATCCCTGGAAAACAATATGTATG 57.255 33.333 0.00 0.00 0.00 2.39
579 580 4.417426 ACGGTTGTTTATCTATCCCTGG 57.583 45.455 0.00 0.00 0.00 4.45
607 608 2.351455 GAAGTAAAGAGCAGCAGACCC 58.649 52.381 0.00 0.00 0.00 4.46
661 662 1.405469 GCGATGGATGCGTTGCAAAC 61.405 55.000 13.42 0.00 43.62 2.93
662 663 1.154054 GCGATGGATGCGTTGCAAA 60.154 52.632 13.42 0.00 43.62 3.68
898 917 6.358178 AGAACAGATCTATTCCGTGAGTCTA 58.642 40.000 10.15 0.00 36.32 2.59
899 918 5.197451 AGAACAGATCTATTCCGTGAGTCT 58.803 41.667 10.15 0.00 36.32 3.24
911 931 6.156083 TGAGAGTCTGAGAGAGAACAGATCTA 59.844 42.308 0.00 0.00 43.46 1.98
944 964 0.940126 GAGGAGCGTACGACGGATAA 59.060 55.000 21.65 0.00 42.82 1.75
945 965 0.105593 AGAGGAGCGTACGACGGATA 59.894 55.000 21.65 0.00 42.82 2.59
957 977 3.119193 CTGAGCCGAGAGAGGAGC 58.881 66.667 0.00 0.00 0.00 4.70
1188 1218 7.061905 CAGGTTAATCAGTCAGTTACAGTTACG 59.938 40.741 0.00 0.00 0.00 3.18
1189 1219 8.086522 TCAGGTTAATCAGTCAGTTACAGTTAC 58.913 37.037 0.00 0.00 0.00 2.50
1480 1600 1.342174 CAGTGAGGCTGGCATGTTTTT 59.658 47.619 3.38 0.00 41.42 1.94
1481 1601 0.963962 CAGTGAGGCTGGCATGTTTT 59.036 50.000 3.38 0.00 41.42 2.43
1482 1602 2.649831 CAGTGAGGCTGGCATGTTT 58.350 52.632 3.38 0.00 41.42 2.83
1550 1670 6.211184 AGCAAAATACTTGTGGGAATCAATCA 59.789 34.615 0.00 0.00 0.00 2.57
1551 1671 6.633856 AGCAAAATACTTGTGGGAATCAATC 58.366 36.000 0.00 0.00 0.00 2.67
1552 1672 6.610075 AGCAAAATACTTGTGGGAATCAAT 57.390 33.333 0.00 0.00 0.00 2.57
1553 1673 6.222389 CAAGCAAAATACTTGTGGGAATCAA 58.778 36.000 0.00 0.00 39.73 2.57
1600 1720 7.602644 TGTTATTAAGACATCAAGCTTTCGAGT 59.397 33.333 0.00 0.00 0.00 4.18
1723 1950 3.397618 TGATTTTTCCTCTTCCAGGTGGA 59.602 43.478 0.00 0.00 43.95 4.02
1770 2016 4.584325 TGTGAATTTTCTCTTCCAAGTGGG 59.416 41.667 0.00 0.00 35.41 4.61
1775 2021 9.528018 GTGTTATTTGTGAATTTTCTCTTCCAA 57.472 29.630 0.00 0.00 0.00 3.53
1857 2106 9.261180 TGTCATAATGCTTATGTTAGCTCTTAC 57.739 33.333 12.59 0.00 42.77 2.34
1922 2171 8.770010 AGCAACTATATAACTAGACAGGTTCT 57.230 34.615 0.00 0.00 38.51 3.01
2040 2289 7.761704 AGCAATTCTCTTGTAGTATGTGTACTG 59.238 37.037 0.00 0.00 41.22 2.74
2041 2290 7.841956 AGCAATTCTCTTGTAGTATGTGTACT 58.158 34.615 0.00 0.00 43.45 2.73
2083 2332 1.694150 GATGTACATCCTAGCAGGCCA 59.306 52.381 22.97 0.00 34.61 5.36
2197 2457 3.819877 GACCCGGTCCAGTTTGCGT 62.820 63.158 6.25 0.00 0.00 5.24
2207 2467 3.774599 GATGGCCATGGACCCGGTC 62.775 68.421 26.56 9.30 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.