Multiple sequence alignment - TraesCS1B01G316000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G316000 chr1B 100.000 2442 0 0 1 2442 540364921 540367362 0.000000e+00 4510.0
1 TraesCS1B01G316000 chr1B 100.000 201 0 0 509 709 539455972 539455772 2.970000e-99 372.0
2 TraesCS1B01G316000 chr1D 90.558 1578 85 27 738 2283 402437864 402439409 0.000000e+00 2030.0
3 TraesCS1B01G316000 chr1D 95.238 210 8 2 509 717 41295333 41295125 5.030000e-87 331.0
4 TraesCS1B01G316000 chr1D 94.811 212 8 3 505 716 454992639 454992847 6.510000e-86 327.0
5 TraesCS1B01G316000 chr1D 87.440 207 17 5 306 504 402437481 402437686 1.890000e-56 230.0
6 TraesCS1B01G316000 chr1A 87.966 1529 90 39 733 2220 497901997 497903472 0.000000e+00 1718.0
7 TraesCS1B01G316000 chr1A 97.068 307 8 1 1 307 23200171 23200476 1.290000e-142 516.0
8 TraesCS1B01G316000 chr1A 95.137 329 13 3 1 327 497363352 497363679 1.290000e-142 516.0
9 TraesCS1B01G316000 chr5A 97.143 315 9 0 1 315 404328583 404328897 1.290000e-147 532.0
10 TraesCS1B01G316000 chr2A 98.039 306 6 0 1 306 638788040 638788345 1.290000e-147 532.0
11 TraesCS1B01G316000 chr5B 97.712 306 7 0 1 306 678669058 678669363 5.980000e-146 527.0
12 TraesCS1B01G316000 chr5B 97.394 307 8 0 1 307 145844556 145844862 7.740000e-145 523.0
13 TraesCS1B01G316000 chr5B 97.386 306 8 0 1 306 652630431 652630736 2.780000e-144 521.0
14 TraesCS1B01G316000 chr7B 96.805 313 9 1 1 312 448464332 448464020 2.780000e-144 521.0
15 TraesCS1B01G316000 chr6A 97.386 306 8 0 1 306 122685326 122685631 2.780000e-144 521.0
16 TraesCS1B01G316000 chr5D 95.215 209 9 1 504 712 168559342 168559549 1.810000e-86 329.0
17 TraesCS1B01G316000 chr5D 95.631 206 8 1 507 712 169316011 169315807 1.810000e-86 329.0
18 TraesCS1B01G316000 chr3D 95.192 208 9 1 508 715 556429126 556429332 6.510000e-86 327.0
19 TraesCS1B01G316000 chr4D 96.020 201 7 1 509 709 437395602 437395403 2.340000e-85 326.0
20 TraesCS1B01G316000 chr7D 93.953 215 11 2 510 723 593180987 593180774 8.420000e-85 324.0
21 TraesCS1B01G316000 chr6D 95.146 206 9 1 508 713 151772858 151773062 8.420000e-85 324.0
22 TraesCS1B01G316000 chr3A 96.970 33 0 1 2268 2299 1745121 1745153 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G316000 chr1B 540364921 540367362 2441 False 4510 4510 100.000 1 2442 1 chr1B.!!$F1 2441
1 TraesCS1B01G316000 chr1D 402437481 402439409 1928 False 1130 2030 88.999 306 2283 2 chr1D.!!$F2 1977
2 TraesCS1B01G316000 chr1A 497901997 497903472 1475 False 1718 1718 87.966 733 2220 1 chr1A.!!$F3 1487

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
341 345 0.24912 ATCATTGCCGTTGACCGAGA 59.751 50.0 0.0 0.0 39.56 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2086 2143 0.037326 GAACTCACGGGACAGCATCA 60.037 55.0 0.0 0.0 0.0 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.422073 TGACATGTTGAGTTGGTTCTCT 57.578 40.909 0.00 0.00 35.68 3.10
22 23 4.380531 TGACATGTTGAGTTGGTTCTCTC 58.619 43.478 0.00 0.00 35.68 3.20
23 24 4.101585 TGACATGTTGAGTTGGTTCTCTCT 59.898 41.667 0.00 0.00 35.68 3.10
24 25 4.384056 ACATGTTGAGTTGGTTCTCTCTG 58.616 43.478 0.00 0.00 35.68 3.35
25 26 4.141620 ACATGTTGAGTTGGTTCTCTCTGT 60.142 41.667 0.00 0.00 35.68 3.41
26 27 4.060038 TGTTGAGTTGGTTCTCTCTGTC 57.940 45.455 0.00 0.00 35.68 3.51
27 28 3.706594 TGTTGAGTTGGTTCTCTCTGTCT 59.293 43.478 0.00 0.00 35.68 3.41
28 29 4.162320 TGTTGAGTTGGTTCTCTCTGTCTT 59.838 41.667 0.00 0.00 35.68 3.01
29 30 4.592485 TGAGTTGGTTCTCTCTGTCTTC 57.408 45.455 0.00 0.00 35.68 2.87
30 31 4.219115 TGAGTTGGTTCTCTCTGTCTTCT 58.781 43.478 0.00 0.00 35.68 2.85
31 32 4.038522 TGAGTTGGTTCTCTCTGTCTTCTG 59.961 45.833 0.00 0.00 35.68 3.02
32 33 4.219115 AGTTGGTTCTCTCTGTCTTCTGA 58.781 43.478 0.00 0.00 0.00 3.27
33 34 4.280677 AGTTGGTTCTCTCTGTCTTCTGAG 59.719 45.833 0.00 0.00 39.79 3.35
34 35 3.161067 TGGTTCTCTCTGTCTTCTGAGG 58.839 50.000 0.00 0.00 39.21 3.86
35 36 2.495669 GGTTCTCTCTGTCTTCTGAGGG 59.504 54.545 0.00 0.00 40.15 4.30
36 37 2.495669 GTTCTCTCTGTCTTCTGAGGGG 59.504 54.545 0.00 0.00 39.55 4.79
37 38 1.006519 TCTCTCTGTCTTCTGAGGGGG 59.993 57.143 0.00 0.00 39.55 5.40
38 39 0.787084 TCTCTGTCTTCTGAGGGGGT 59.213 55.000 0.00 0.00 39.21 4.95
39 40 0.901124 CTCTGTCTTCTGAGGGGGTG 59.099 60.000 0.00 0.00 36.45 4.61
40 41 0.487325 TCTGTCTTCTGAGGGGGTGA 59.513 55.000 0.00 0.00 0.00 4.02
41 42 1.132849 TCTGTCTTCTGAGGGGGTGAA 60.133 52.381 0.00 0.00 0.00 3.18
42 43 1.912043 CTGTCTTCTGAGGGGGTGAAT 59.088 52.381 0.00 0.00 0.00 2.57
43 44 1.630369 TGTCTTCTGAGGGGGTGAATG 59.370 52.381 0.00 0.00 0.00 2.67
44 45 0.620556 TCTTCTGAGGGGGTGAATGC 59.379 55.000 0.00 0.00 0.00 3.56
45 46 0.329261 CTTCTGAGGGGGTGAATGCA 59.671 55.000 0.00 0.00 0.00 3.96
46 47 0.776810 TTCTGAGGGGGTGAATGCAA 59.223 50.000 0.00 0.00 0.00 4.08
47 48 0.776810 TCTGAGGGGGTGAATGCAAA 59.223 50.000 0.00 0.00 0.00 3.68
48 49 1.180029 CTGAGGGGGTGAATGCAAAG 58.820 55.000 0.00 0.00 0.00 2.77
49 50 0.899717 TGAGGGGGTGAATGCAAAGC 60.900 55.000 0.00 0.00 0.00 3.51
50 51 0.899717 GAGGGGGTGAATGCAAAGCA 60.900 55.000 0.00 0.00 44.86 3.91
51 52 0.901580 AGGGGGTGAATGCAAAGCAG 60.902 55.000 0.00 0.00 43.65 4.24
52 53 1.187567 GGGGGTGAATGCAAAGCAGT 61.188 55.000 0.00 0.00 43.65 4.40
62 63 4.907879 ATGCAAAGCAGTCTATTAAGCC 57.092 40.909 0.00 0.00 43.65 4.35
63 64 3.684908 TGCAAAGCAGTCTATTAAGCCA 58.315 40.909 0.00 0.00 33.32 4.75
64 65 3.691118 TGCAAAGCAGTCTATTAAGCCAG 59.309 43.478 0.00 0.00 33.32 4.85
65 66 3.065925 GCAAAGCAGTCTATTAAGCCAGG 59.934 47.826 0.00 0.00 0.00 4.45
66 67 2.629336 AGCAGTCTATTAAGCCAGGC 57.371 50.000 1.84 1.84 0.00 4.85
67 68 1.839994 AGCAGTCTATTAAGCCAGGCA 59.160 47.619 15.80 0.00 0.00 4.75
68 69 1.943340 GCAGTCTATTAAGCCAGGCAC 59.057 52.381 15.80 0.18 0.00 5.01
69 70 2.420687 GCAGTCTATTAAGCCAGGCACT 60.421 50.000 15.80 2.99 43.88 4.40
70 71 3.181465 GCAGTCTATTAAGCCAGGCACTA 60.181 47.826 15.80 1.09 36.02 2.74
71 72 4.503991 GCAGTCTATTAAGCCAGGCACTAT 60.504 45.833 15.80 5.82 36.02 2.12
72 73 5.615289 CAGTCTATTAAGCCAGGCACTATT 58.385 41.667 15.80 0.89 36.02 1.73
73 74 5.468072 CAGTCTATTAAGCCAGGCACTATTG 59.532 44.000 15.80 4.64 36.02 1.90
87 88 5.490139 GCACTATTGCTGAGCTAAATTGA 57.510 39.130 5.83 0.00 46.17 2.57
88 89 5.269313 GCACTATTGCTGAGCTAAATTGAC 58.731 41.667 5.83 0.00 46.17 3.18
89 90 5.163723 GCACTATTGCTGAGCTAAATTGACA 60.164 40.000 5.83 0.00 46.17 3.58
90 91 6.623549 GCACTATTGCTGAGCTAAATTGACAA 60.624 38.462 5.83 0.00 46.17 3.18
91 92 7.307694 CACTATTGCTGAGCTAAATTGACAAA 58.692 34.615 5.83 0.00 0.00 2.83
92 93 7.809331 CACTATTGCTGAGCTAAATTGACAAAA 59.191 33.333 5.83 0.00 0.00 2.44
93 94 8.359642 ACTATTGCTGAGCTAAATTGACAAAAA 58.640 29.630 5.83 0.00 0.00 1.94
117 118 9.695155 AAAAATATTGGTAGCCATAGTTGTAGT 57.305 29.630 0.25 0.00 31.53 2.73
118 119 9.695155 AAAATATTGGTAGCCATAGTTGTAGTT 57.305 29.630 0.25 0.00 31.53 2.24
119 120 9.695155 AAATATTGGTAGCCATAGTTGTAGTTT 57.305 29.630 0.00 0.00 31.53 2.66
122 123 8.732746 ATTGGTAGCCATAGTTGTAGTTTAAG 57.267 34.615 0.00 0.00 31.53 1.85
123 124 7.248743 TGGTAGCCATAGTTGTAGTTTAAGT 57.751 36.000 0.00 0.00 0.00 2.24
124 125 8.365060 TGGTAGCCATAGTTGTAGTTTAAGTA 57.635 34.615 0.00 0.00 0.00 2.24
125 126 8.472413 TGGTAGCCATAGTTGTAGTTTAAGTAG 58.528 37.037 0.00 0.00 0.00 2.57
126 127 8.473219 GGTAGCCATAGTTGTAGTTTAAGTAGT 58.527 37.037 0.00 0.00 0.00 2.73
129 130 8.196103 AGCCATAGTTGTAGTTTAAGTAGTAGC 58.804 37.037 0.00 0.00 0.00 3.58
130 131 7.167136 GCCATAGTTGTAGTTTAAGTAGTAGCG 59.833 40.741 0.00 0.00 0.00 4.26
131 132 8.400947 CCATAGTTGTAGTTTAAGTAGTAGCGA 58.599 37.037 0.00 0.00 0.00 4.93
132 133 9.435802 CATAGTTGTAGTTTAAGTAGTAGCGAG 57.564 37.037 0.00 0.00 0.00 5.03
133 134 7.446001 AGTTGTAGTTTAAGTAGTAGCGAGT 57.554 36.000 0.00 0.00 0.00 4.18
134 135 7.880105 AGTTGTAGTTTAAGTAGTAGCGAGTT 58.120 34.615 0.00 0.00 0.00 3.01
135 136 7.806960 AGTTGTAGTTTAAGTAGTAGCGAGTTG 59.193 37.037 0.00 0.00 0.00 3.16
136 137 7.206981 TGTAGTTTAAGTAGTAGCGAGTTGT 57.793 36.000 0.00 0.00 0.00 3.32
137 138 7.301054 TGTAGTTTAAGTAGTAGCGAGTTGTC 58.699 38.462 0.00 0.00 0.00 3.18
138 139 6.572167 AGTTTAAGTAGTAGCGAGTTGTCT 57.428 37.500 0.00 0.00 0.00 3.41
139 140 6.380190 AGTTTAAGTAGTAGCGAGTTGTCTG 58.620 40.000 0.00 0.00 0.00 3.51
140 141 6.206243 AGTTTAAGTAGTAGCGAGTTGTCTGA 59.794 38.462 0.00 0.00 0.00 3.27
141 142 6.754702 TTAAGTAGTAGCGAGTTGTCTGAT 57.245 37.500 0.00 0.00 0.00 2.90
142 143 7.854557 TTAAGTAGTAGCGAGTTGTCTGATA 57.145 36.000 0.00 0.00 0.00 2.15
143 144 6.945938 AAGTAGTAGCGAGTTGTCTGATAT 57.054 37.500 0.00 0.00 0.00 1.63
144 145 6.307031 AGTAGTAGCGAGTTGTCTGATATG 57.693 41.667 0.00 0.00 0.00 1.78
145 146 5.823570 AGTAGTAGCGAGTTGTCTGATATGT 59.176 40.000 0.00 0.00 0.00 2.29
146 147 6.990939 AGTAGTAGCGAGTTGTCTGATATGTA 59.009 38.462 0.00 0.00 0.00 2.29
147 148 6.885952 AGTAGCGAGTTGTCTGATATGTAT 57.114 37.500 0.00 0.00 0.00 2.29
148 149 7.981102 AGTAGCGAGTTGTCTGATATGTATA 57.019 36.000 0.00 0.00 0.00 1.47
149 150 8.392372 AGTAGCGAGTTGTCTGATATGTATAA 57.608 34.615 0.00 0.00 0.00 0.98
150 151 8.847196 AGTAGCGAGTTGTCTGATATGTATAAA 58.153 33.333 0.00 0.00 0.00 1.40
151 152 9.119329 GTAGCGAGTTGTCTGATATGTATAAAG 57.881 37.037 0.00 0.00 0.00 1.85
152 153 7.941919 AGCGAGTTGTCTGATATGTATAAAGA 58.058 34.615 0.00 0.00 0.00 2.52
153 154 8.079203 AGCGAGTTGTCTGATATGTATAAAGAG 58.921 37.037 0.00 0.00 0.00 2.85
154 155 7.148885 GCGAGTTGTCTGATATGTATAAAGAGC 60.149 40.741 0.00 0.00 0.00 4.09
155 156 7.327275 CGAGTTGTCTGATATGTATAAAGAGCC 59.673 40.741 0.00 0.00 0.00 4.70
156 157 7.445945 AGTTGTCTGATATGTATAAAGAGCCC 58.554 38.462 0.00 0.00 0.00 5.19
157 158 6.025749 TGTCTGATATGTATAAAGAGCCCG 57.974 41.667 0.00 0.00 0.00 6.13
158 159 5.538813 TGTCTGATATGTATAAAGAGCCCGT 59.461 40.000 0.00 0.00 0.00 5.28
159 160 6.041637 TGTCTGATATGTATAAAGAGCCCGTT 59.958 38.462 0.00 0.00 0.00 4.44
160 161 6.366332 GTCTGATATGTATAAAGAGCCCGTTG 59.634 42.308 0.00 0.00 0.00 4.10
161 162 4.994852 TGATATGTATAAAGAGCCCGTTGC 59.005 41.667 0.00 0.00 41.71 4.17
162 163 2.772077 TGTATAAAGAGCCCGTTGCA 57.228 45.000 0.00 0.00 44.83 4.08
163 164 3.060736 TGTATAAAGAGCCCGTTGCAA 57.939 42.857 0.00 0.00 44.83 4.08
164 165 2.745281 TGTATAAAGAGCCCGTTGCAAC 59.255 45.455 19.89 19.89 44.83 4.17
165 166 2.200373 ATAAAGAGCCCGTTGCAACT 57.800 45.000 26.09 8.43 44.83 3.16
166 167 1.234821 TAAAGAGCCCGTTGCAACTG 58.765 50.000 26.09 19.88 44.83 3.16
167 168 0.465460 AAAGAGCCCGTTGCAACTGA 60.465 50.000 26.09 0.00 44.83 3.41
168 169 0.886490 AAGAGCCCGTTGCAACTGAG 60.886 55.000 26.09 15.45 44.83 3.35
169 170 2.970974 GAGCCCGTTGCAACTGAGC 61.971 63.158 26.09 23.22 44.83 4.26
170 171 4.043200 GCCCGTTGCAACTGAGCC 62.043 66.667 26.09 8.83 40.77 4.70
171 172 3.365265 CCCGTTGCAACTGAGCCC 61.365 66.667 26.09 0.00 0.00 5.19
172 173 3.726517 CCGTTGCAACTGAGCCCG 61.727 66.667 26.09 11.77 0.00 6.13
173 174 2.972505 CGTTGCAACTGAGCCCGT 60.973 61.111 26.09 0.00 0.00 5.28
174 175 2.542907 CGTTGCAACTGAGCCCGTT 61.543 57.895 26.09 0.00 0.00 4.44
175 176 1.008538 GTTGCAACTGAGCCCGTTG 60.009 57.895 22.36 6.12 43.41 4.10
187 188 2.715737 GCCCGTTGCTAAATTGACAA 57.284 45.000 0.00 0.00 36.87 3.18
188 189 3.019933 GCCCGTTGCTAAATTGACAAA 57.980 42.857 0.00 0.00 36.87 2.83
189 190 3.385577 GCCCGTTGCTAAATTGACAAAA 58.614 40.909 0.00 0.00 36.87 2.44
190 191 3.804873 GCCCGTTGCTAAATTGACAAAAA 59.195 39.130 0.00 0.00 36.87 1.94
208 209 4.853924 AAAAAGATCGCCAATGTCACTT 57.146 36.364 0.00 0.00 0.00 3.16
209 210 3.837213 AAAGATCGCCAATGTCACTTG 57.163 42.857 0.00 0.00 0.00 3.16
210 211 2.768253 AGATCGCCAATGTCACTTGA 57.232 45.000 0.00 0.00 0.00 3.02
211 212 3.272574 AGATCGCCAATGTCACTTGAT 57.727 42.857 0.00 0.00 0.00 2.57
212 213 4.406648 AGATCGCCAATGTCACTTGATA 57.593 40.909 0.00 0.00 0.00 2.15
213 214 4.965814 AGATCGCCAATGTCACTTGATAT 58.034 39.130 0.00 0.00 0.00 1.63
214 215 4.753610 AGATCGCCAATGTCACTTGATATG 59.246 41.667 0.00 0.00 0.00 1.78
215 216 3.872696 TCGCCAATGTCACTTGATATGT 58.127 40.909 0.00 0.00 0.00 2.29
216 217 5.017294 TCGCCAATGTCACTTGATATGTA 57.983 39.130 0.00 0.00 0.00 2.29
217 218 5.610398 TCGCCAATGTCACTTGATATGTAT 58.390 37.500 0.00 0.00 0.00 2.29
218 219 5.466393 TCGCCAATGTCACTTGATATGTATG 59.534 40.000 0.00 0.00 0.00 2.39
219 220 5.466393 CGCCAATGTCACTTGATATGTATGA 59.534 40.000 0.00 0.00 0.00 2.15
220 221 6.347160 CGCCAATGTCACTTGATATGTATGAG 60.347 42.308 0.00 0.00 0.00 2.90
221 222 6.707608 GCCAATGTCACTTGATATGTATGAGA 59.292 38.462 0.00 0.00 0.00 3.27
222 223 7.227314 GCCAATGTCACTTGATATGTATGAGAA 59.773 37.037 0.00 0.00 0.00 2.87
223 224 9.281371 CCAATGTCACTTGATATGTATGAGAAT 57.719 33.333 0.00 0.00 0.00 2.40
281 282 9.990868 AACTCTTAAAGTTAATATGGTCCCATT 57.009 29.630 3.76 0.00 46.55 3.16
282 283 9.408648 ACTCTTAAAGTTAATATGGTCCCATTG 57.591 33.333 3.76 0.00 34.66 2.82
283 284 8.232913 TCTTAAAGTTAATATGGTCCCATTGC 57.767 34.615 3.76 0.00 37.82 3.56
284 285 7.836685 TCTTAAAGTTAATATGGTCCCATTGCA 59.163 33.333 3.76 0.00 37.82 4.08
285 286 6.865834 AAAGTTAATATGGTCCCATTGCAA 57.134 33.333 0.00 0.00 37.82 4.08
286 287 5.852282 AGTTAATATGGTCCCATTGCAAC 57.148 39.130 0.00 6.37 37.82 4.17
287 288 4.338118 AGTTAATATGGTCCCATTGCAACG 59.662 41.667 0.00 0.00 37.82 4.10
288 289 1.032014 ATATGGTCCCATTGCAACGC 58.968 50.000 0.00 0.00 37.82 4.84
289 290 0.322906 TATGGTCCCATTGCAACGCA 60.323 50.000 0.00 0.00 37.82 5.24
290 291 1.876497 ATGGTCCCATTGCAACGCAC 61.876 55.000 0.00 0.00 38.71 5.34
291 292 2.126888 GTCCCATTGCAACGCACG 60.127 61.111 0.00 0.00 38.71 5.34
292 293 3.361158 TCCCATTGCAACGCACGG 61.361 61.111 0.00 0.00 38.71 4.94
293 294 4.418401 CCCATTGCAACGCACGGG 62.418 66.667 0.00 3.16 42.59 5.28
304 305 3.782042 GCACGGGCGTTCTTCTAG 58.218 61.111 0.00 0.00 0.00 2.43
310 311 1.725164 CGGGCGTTCTTCTAGTTCAAC 59.275 52.381 0.00 0.00 0.00 3.18
341 345 0.249120 ATCATTGCCGTTGACCGAGA 59.751 50.000 0.00 0.00 39.56 4.04
343 347 1.086696 CATTGCCGTTGACCGAGAAT 58.913 50.000 0.00 0.00 39.56 2.40
383 387 6.083383 TGTTTGGGGCATGATAATTCCATAT 58.917 36.000 0.00 0.00 0.00 1.78
414 418 7.946207 TCACTACAGATAATGTTTGGCAAAAA 58.054 30.769 15.29 10.22 39.96 1.94
504 513 5.104277 ACATTGGGTCTATATTTGGAACGGA 60.104 40.000 0.00 0.00 0.00 4.69
505 514 4.682778 TGGGTCTATATTTGGAACGGAG 57.317 45.455 0.00 0.00 0.00 4.63
510 519 6.041296 GGGTCTATATTTGGAACGGAGTAAGA 59.959 42.308 0.00 0.00 45.00 2.10
511 520 7.146648 GGTCTATATTTGGAACGGAGTAAGAG 58.853 42.308 0.00 0.00 45.00 2.85
514 523 3.695830 TTTGGAACGGAGTAAGAGCAT 57.304 42.857 0.00 0.00 45.00 3.79
515 524 4.811969 TTTGGAACGGAGTAAGAGCATA 57.188 40.909 0.00 0.00 45.00 3.14
516 525 4.811969 TTGGAACGGAGTAAGAGCATAA 57.188 40.909 0.00 0.00 45.00 1.90
517 526 5.353394 TTGGAACGGAGTAAGAGCATAAT 57.647 39.130 0.00 0.00 45.00 1.28
518 527 5.353394 TGGAACGGAGTAAGAGCATAATT 57.647 39.130 0.00 0.00 45.00 1.40
519 528 5.116180 TGGAACGGAGTAAGAGCATAATTG 58.884 41.667 0.00 0.00 45.00 2.32
520 529 4.511826 GGAACGGAGTAAGAGCATAATTGG 59.488 45.833 0.00 0.00 45.00 3.16
521 530 4.755266 ACGGAGTAAGAGCATAATTGGT 57.245 40.909 0.00 0.00 41.94 3.67
524 533 5.354234 ACGGAGTAAGAGCATAATTGGTTTG 59.646 40.000 0.00 0.00 41.94 2.93
525 534 5.584649 CGGAGTAAGAGCATAATTGGTTTGA 59.415 40.000 0.00 0.00 32.62 2.69
526 535 6.260936 CGGAGTAAGAGCATAATTGGTTTGAT 59.739 38.462 0.00 0.00 32.62 2.57
527 536 7.420800 GGAGTAAGAGCATAATTGGTTTGATG 58.579 38.462 0.00 0.00 32.62 3.07
528 537 6.799512 AGTAAGAGCATAATTGGTTTGATGC 58.200 36.000 1.15 1.15 44.05 3.91
530 539 4.025360 AGAGCATAATTGGTTTGATGCCA 58.975 39.130 5.24 0.00 44.65 4.92
538 547 4.412796 TTGGTTTGATGCCAACATTTGA 57.587 36.364 0.00 0.00 40.69 2.69
541 550 4.202336 TGGTTTGATGCCAACATTTGACAT 60.202 37.500 0.00 0.00 36.41 3.06
542 551 4.756135 GGTTTGATGCCAACATTTGACATT 59.244 37.500 0.00 0.00 33.73 2.71
543 552 5.334260 GGTTTGATGCCAACATTTGACATTG 60.334 40.000 0.00 0.00 33.73 2.82
544 553 3.327626 TGATGCCAACATTTGACATTGC 58.672 40.909 0.00 0.00 33.73 3.56
546 555 1.415289 TGCCAACATTTGACATTGCCA 59.585 42.857 0.00 0.00 0.00 4.92
547 556 2.158856 TGCCAACATTTGACATTGCCAA 60.159 40.909 0.00 0.00 0.00 4.52
548 557 3.075884 GCCAACATTTGACATTGCCAAT 58.924 40.909 0.00 0.00 0.00 3.16
549 558 4.252073 GCCAACATTTGACATTGCCAATA 58.748 39.130 0.00 0.00 0.00 1.90
550 559 4.877251 GCCAACATTTGACATTGCCAATAT 59.123 37.500 0.00 0.00 0.00 1.28
551 560 5.354792 GCCAACATTTGACATTGCCAATATT 59.645 36.000 0.00 0.00 0.00 1.28
553 562 7.244898 CCAACATTTGACATTGCCAATATTTG 58.755 34.615 0.00 0.00 0.00 2.32
582 591 6.134040 CCAACATTTGGCAAAATCAAAAGT 57.866 33.333 17.70 4.62 45.17 2.66
583 592 6.562518 CCAACATTTGGCAAAATCAAAAGTT 58.437 32.000 17.70 9.90 45.17 2.66
584 593 7.439204 CAACATTTGGCAAAATCAAAAGTTG 57.561 32.000 17.70 17.09 46.81 3.16
585 594 5.580661 ACATTTGGCAAAATCAAAAGTTGC 58.419 33.333 17.70 0.00 45.48 4.17
592 601 6.544038 GCAAAATCAAAAGTTGCCTAATGT 57.456 33.333 0.00 0.00 41.41 2.71
594 603 6.852345 GCAAAATCAAAAGTTGCCTAATGTTG 59.148 34.615 0.00 0.00 41.41 3.33
595 604 7.354257 CAAAATCAAAAGTTGCCTAATGTTGG 58.646 34.615 0.00 0.00 0.00 3.77
607 616 5.655893 CCTAATGTTGGCAACTTTTTGTG 57.344 39.130 29.00 18.58 34.90 3.33
608 617 5.355596 CCTAATGTTGGCAACTTTTTGTGA 58.644 37.500 29.00 14.68 34.90 3.58
609 618 5.463061 CCTAATGTTGGCAACTTTTTGTGAG 59.537 40.000 29.00 20.99 34.90 3.51
610 619 3.244033 TGTTGGCAACTTTTTGTGAGG 57.756 42.857 28.71 0.00 34.90 3.86
611 620 2.564947 TGTTGGCAACTTTTTGTGAGGT 59.435 40.909 28.71 0.00 34.90 3.85
612 621 3.007398 TGTTGGCAACTTTTTGTGAGGTT 59.993 39.130 28.71 0.00 34.90 3.50
613 622 3.244033 TGGCAACTTTTTGTGAGGTTG 57.756 42.857 0.00 0.00 41.07 3.77
614 623 2.828520 TGGCAACTTTTTGTGAGGTTGA 59.171 40.909 8.55 0.00 40.74 3.18
615 624 3.119173 TGGCAACTTTTTGTGAGGTTGAG 60.119 43.478 8.55 0.00 40.74 3.02
616 625 3.130340 GGCAACTTTTTGTGAGGTTGAGA 59.870 43.478 8.55 0.00 40.74 3.27
618 627 4.800471 GCAACTTTTTGTGAGGTTGAGAAG 59.200 41.667 8.55 0.00 40.74 2.85
621 630 6.834168 ACTTTTTGTGAGGTTGAGAAGAAA 57.166 33.333 0.00 0.00 0.00 2.52
623 632 7.315890 ACTTTTTGTGAGGTTGAGAAGAAAAG 58.684 34.615 0.00 0.00 37.50 2.27
624 633 6.834168 TTTTGTGAGGTTGAGAAGAAAAGT 57.166 33.333 0.00 0.00 0.00 2.66
625 634 6.834168 TTTGTGAGGTTGAGAAGAAAAGTT 57.166 33.333 0.00 0.00 0.00 2.66
627 636 4.640201 TGTGAGGTTGAGAAGAAAAGTTGG 59.360 41.667 0.00 0.00 0.00 3.77
628 637 4.640647 GTGAGGTTGAGAAGAAAAGTTGGT 59.359 41.667 0.00 0.00 0.00 3.67
629 638 5.820947 GTGAGGTTGAGAAGAAAAGTTGGTA 59.179 40.000 0.00 0.00 0.00 3.25
632 641 6.056236 AGGTTGAGAAGAAAAGTTGGTAGTC 58.944 40.000 0.00 0.00 0.00 2.59
633 642 5.820947 GGTTGAGAAGAAAAGTTGGTAGTCA 59.179 40.000 0.00 0.00 0.00 3.41
634 643 6.317893 GGTTGAGAAGAAAAGTTGGTAGTCAA 59.682 38.462 0.00 0.00 0.00 3.18
648 657 4.202245 GTAGTCAACCAATCACTAGCCA 57.798 45.455 0.00 0.00 0.00 4.75
649 658 3.788227 AGTCAACCAATCACTAGCCAA 57.212 42.857 0.00 0.00 0.00 4.52
651 660 3.146066 GTCAACCAATCACTAGCCAACA 58.854 45.455 0.00 0.00 0.00 3.33
652 661 3.758554 GTCAACCAATCACTAGCCAACAT 59.241 43.478 0.00 0.00 0.00 2.71
655 664 4.789012 ACCAATCACTAGCCAACATTTG 57.211 40.909 0.00 0.00 0.00 2.32
698 707 2.064573 CCAACTTTTGGCATCGAACC 57.935 50.000 0.00 0.00 45.17 3.62
699 708 1.339610 CCAACTTTTGGCATCGAACCA 59.660 47.619 6.45 6.45 45.17 3.67
700 709 2.223923 CCAACTTTTGGCATCGAACCAA 60.224 45.455 16.88 16.88 45.17 3.67
701 710 3.554752 CCAACTTTTGGCATCGAACCAAT 60.555 43.478 20.29 6.70 46.25 3.16
702 711 3.575965 ACTTTTGGCATCGAACCAATC 57.424 42.857 20.29 0.00 46.25 2.67
703 712 2.890311 ACTTTTGGCATCGAACCAATCA 59.110 40.909 20.29 11.54 46.25 2.57
704 713 3.511146 ACTTTTGGCATCGAACCAATCAT 59.489 39.130 20.29 8.83 46.25 2.45
705 714 3.507103 TTTGGCATCGAACCAATCATG 57.493 42.857 20.29 0.00 46.25 3.07
706 715 0.740149 TGGCATCGAACCAATCATGC 59.260 50.000 8.01 1.52 39.64 4.06
707 716 1.027357 GGCATCGAACCAATCATGCT 58.973 50.000 3.08 0.00 39.96 3.79
708 717 1.002033 GGCATCGAACCAATCATGCTC 60.002 52.381 3.08 0.00 39.96 4.26
709 718 1.945394 GCATCGAACCAATCATGCTCT 59.055 47.619 0.00 0.00 38.47 4.09
710 719 3.133691 GCATCGAACCAATCATGCTCTA 58.866 45.455 0.00 0.00 38.47 2.43
711 720 3.561310 GCATCGAACCAATCATGCTCTAA 59.439 43.478 0.00 0.00 38.47 2.10
712 721 4.319333 GCATCGAACCAATCATGCTCTAAG 60.319 45.833 0.00 0.00 38.47 2.18
713 722 4.471904 TCGAACCAATCATGCTCTAAGT 57.528 40.909 0.00 0.00 0.00 2.24
714 723 4.433615 TCGAACCAATCATGCTCTAAGTC 58.566 43.478 0.00 0.00 0.00 3.01
715 724 3.557595 CGAACCAATCATGCTCTAAGTCC 59.442 47.826 0.00 0.00 0.00 3.85
716 725 4.517285 GAACCAATCATGCTCTAAGTCCA 58.483 43.478 0.00 0.00 0.00 4.02
717 726 4.148128 ACCAATCATGCTCTAAGTCCAG 57.852 45.455 0.00 0.00 0.00 3.86
718 727 3.776969 ACCAATCATGCTCTAAGTCCAGA 59.223 43.478 0.00 0.00 0.00 3.86
719 728 4.125703 CCAATCATGCTCTAAGTCCAGAC 58.874 47.826 0.00 0.00 0.00 3.51
720 729 4.383444 CCAATCATGCTCTAAGTCCAGACA 60.383 45.833 0.00 0.00 0.00 3.41
721 730 3.876274 TCATGCTCTAAGTCCAGACAC 57.124 47.619 0.00 0.00 0.00 3.67
722 731 3.165071 TCATGCTCTAAGTCCAGACACA 58.835 45.455 0.00 0.00 0.00 3.72
723 732 3.194329 TCATGCTCTAAGTCCAGACACAG 59.806 47.826 0.00 0.00 0.00 3.66
724 733 1.273606 TGCTCTAAGTCCAGACACAGC 59.726 52.381 0.00 2.60 0.00 4.40
725 734 1.273606 GCTCTAAGTCCAGACACAGCA 59.726 52.381 0.00 0.00 0.00 4.41
726 735 2.289072 GCTCTAAGTCCAGACACAGCAA 60.289 50.000 0.00 0.00 0.00 3.91
727 736 3.803715 GCTCTAAGTCCAGACACAGCAAA 60.804 47.826 0.00 0.00 0.00 3.68
728 737 4.380531 CTCTAAGTCCAGACACAGCAAAA 58.619 43.478 0.00 0.00 0.00 2.44
729 738 4.973168 TCTAAGTCCAGACACAGCAAAAT 58.027 39.130 0.00 0.00 0.00 1.82
730 739 5.376625 TCTAAGTCCAGACACAGCAAAATT 58.623 37.500 0.00 0.00 0.00 1.82
731 740 5.827797 TCTAAGTCCAGACACAGCAAAATTT 59.172 36.000 0.00 0.00 0.00 1.82
732 741 5.343307 AAGTCCAGACACAGCAAAATTTT 57.657 34.783 0.00 0.00 0.00 1.82
733 742 6.463995 AAGTCCAGACACAGCAAAATTTTA 57.536 33.333 2.44 0.00 0.00 1.52
734 743 6.463995 AGTCCAGACACAGCAAAATTTTAA 57.536 33.333 2.44 0.00 0.00 1.52
735 744 7.054491 AGTCCAGACACAGCAAAATTTTAAT 57.946 32.000 2.44 0.00 0.00 1.40
736 745 8.177119 AGTCCAGACACAGCAAAATTTTAATA 57.823 30.769 2.44 0.00 0.00 0.98
761 770 4.017808 ACTACTAGTAGTGCCACAAGGAG 58.982 47.826 30.33 6.81 44.11 3.69
799 809 3.801997 CAGAGCATCCCCCGCCTT 61.802 66.667 0.00 0.00 33.66 4.35
807 817 1.642513 ATCCCCCGCCTTCTAAACCC 61.643 60.000 0.00 0.00 0.00 4.11
848 858 4.080243 TGACCTTTTGTAGTGGGACAAGAA 60.080 41.667 0.00 0.00 44.16 2.52
854 864 4.873746 TGTAGTGGGACAAGAAGAGAAG 57.126 45.455 0.00 0.00 44.16 2.85
995 1012 6.131544 ACAGTTGTTTTCGTTTCTAGCAAT 57.868 33.333 0.00 0.00 0.00 3.56
1012 1029 2.158696 GCAATAGCAATGGAGTCCTCCT 60.159 50.000 11.33 3.94 44.77 3.69
1046 1066 2.762043 GAGCCCTCTCCTCGCCTT 60.762 66.667 0.00 0.00 33.19 4.35
1054 1074 2.038007 TCCTCGCCTTCCTCTGCT 59.962 61.111 0.00 0.00 0.00 4.24
1077 1097 2.115911 CGTCGTCCTCCTCCTCCTG 61.116 68.421 0.00 0.00 0.00 3.86
1092 1112 2.352805 CTGGTCCTTCCCCTGCAC 59.647 66.667 0.00 0.00 34.77 4.57
1186 1206 5.059161 CCGTTCTTGATCCATGATACATGT 58.941 41.667 2.69 2.69 0.00 3.21
1188 1208 5.525012 CGTTCTTGATCCATGATACATGTGT 59.475 40.000 9.11 0.10 0.00 3.72
1196 1216 8.255905 TGATCCATGATACATGTGTCATAGATC 58.744 37.037 37.66 37.66 46.11 2.75
1200 1220 5.787380 TGATACATGTGTCATAGATCCAGC 58.213 41.667 20.07 0.00 0.00 4.85
1203 1223 2.609427 TGTGTCATAGATCCAGCTGC 57.391 50.000 8.66 0.00 0.00 5.25
1242 1262 1.725641 GCTGATCATTCGTGTGGTGA 58.274 50.000 0.00 0.00 0.00 4.02
1247 1267 3.934579 TGATCATTCGTGTGGTGATCTTG 59.065 43.478 13.68 0.00 45.26 3.02
1269 1289 2.124983 GAGCATGCGCCTGAGGAA 60.125 61.111 17.36 0.00 39.83 3.36
1278 1298 2.752358 CCTGAGGAACCAGCAGCA 59.248 61.111 0.00 0.00 32.97 4.41
1305 1325 3.056891 CCGTCTCTGAAGCTTTCTTCTCT 60.057 47.826 0.00 0.00 46.81 3.10
1445 1468 2.221299 CCCGGAAGAGGGTGAACCA 61.221 63.158 0.73 0.00 46.38 3.67
1624 1655 6.387513 TCTCCTCTTCCTAGTACTGTATCTGT 59.612 42.308 5.39 0.00 0.00 3.41
1625 1656 6.593807 TCCTCTTCCTAGTACTGTATCTGTC 58.406 44.000 5.39 0.00 0.00 3.51
1626 1657 6.158169 TCCTCTTCCTAGTACTGTATCTGTCA 59.842 42.308 5.39 0.00 0.00 3.58
1627 1658 6.829298 CCTCTTCCTAGTACTGTATCTGTCAA 59.171 42.308 5.39 0.00 0.00 3.18
1628 1659 7.201750 CCTCTTCCTAGTACTGTATCTGTCAAC 60.202 44.444 5.39 0.00 0.00 3.18
1781 1823 3.485394 TGCTTGCTCCAATCAGTTAACA 58.515 40.909 8.61 0.00 0.00 2.41
1799 1841 2.079158 ACACACTGATGCATGCTGTAC 58.921 47.619 20.33 8.01 0.00 2.90
1809 1856 5.180304 TGATGCATGCTGTACGTTTAAGAAA 59.820 36.000 20.33 0.00 0.00 2.52
1851 1898 1.709147 ATCATTGCTCGCTTGACCGC 61.709 55.000 0.00 0.00 0.00 5.68
1859 1906 2.665185 GCTTGACCGCGTCCTGTT 60.665 61.111 4.92 0.00 0.00 3.16
1860 1907 2.668280 GCTTGACCGCGTCCTGTTC 61.668 63.158 4.92 0.00 0.00 3.18
1861 1908 2.027625 CTTGACCGCGTCCTGTTCC 61.028 63.158 4.92 0.00 0.00 3.62
1891 1938 1.135373 TCGTCCGATCTGTTGCTTCTC 60.135 52.381 0.00 0.00 0.00 2.87
2035 2084 0.310854 CCGAAAACAACTCCTGTGCC 59.689 55.000 0.00 0.00 38.67 5.01
2060 2112 2.509336 GACAGATGGACGGTGCGG 60.509 66.667 0.00 0.00 0.00 5.69
2062 2114 3.770040 CAGATGGACGGTGCGGGA 61.770 66.667 0.00 0.00 0.00 5.14
2063 2115 2.764128 AGATGGACGGTGCGGGAT 60.764 61.111 0.00 0.00 0.00 3.85
2064 2116 1.456892 AGATGGACGGTGCGGGATA 60.457 57.895 0.00 0.00 0.00 2.59
2078 2135 3.267900 GGATACCATCGTGACGTGG 57.732 57.895 19.76 19.76 41.35 4.94
2086 2143 1.899437 ATCGTGACGTGGGATGCCTT 61.899 55.000 4.40 0.00 0.00 4.35
2125 2182 2.605818 TCTGTGTTCGAAAACAACTCCG 59.394 45.455 21.17 10.01 46.56 4.63
2148 2205 0.530650 CGGTGATCATCCCAACGGAG 60.531 60.000 0.00 0.00 43.12 4.63
2199 2260 0.452184 AGACAGACGCGTGTATCTGG 59.548 55.000 20.70 2.01 45.55 3.86
2224 2285 6.992715 GCCCTTGATAAGACTTGTGTATGTAT 59.007 38.462 0.00 0.00 0.00 2.29
2239 2300 1.664965 GTATGTGATCGCTCGGCCC 60.665 63.158 7.94 0.00 0.00 5.80
2250 2311 4.051167 TCGGCCCCACTCGTCCTA 62.051 66.667 0.00 0.00 0.00 2.94
2257 2318 2.102357 CACTCGTCCTACGCGCAT 59.898 61.111 5.73 0.00 42.21 4.73
2283 2344 2.107366 TGCGTGATAAGGACATCTCCA 58.893 47.619 0.00 0.00 39.39 3.86
2284 2345 2.499693 TGCGTGATAAGGACATCTCCAA 59.500 45.455 0.00 0.00 39.39 3.53
2285 2346 2.866762 GCGTGATAAGGACATCTCCAAC 59.133 50.000 0.00 0.00 39.39 3.77
2286 2347 3.116300 CGTGATAAGGACATCTCCAACG 58.884 50.000 0.00 0.00 39.39 4.10
2287 2348 2.866762 GTGATAAGGACATCTCCAACGC 59.133 50.000 0.00 0.00 39.39 4.84
2288 2349 2.128035 GATAAGGACATCTCCAACGCG 58.872 52.381 3.53 3.53 39.39 6.01
2289 2350 0.174845 TAAGGACATCTCCAACGCGG 59.825 55.000 12.47 0.00 39.39 6.46
2290 2351 1.541310 AAGGACATCTCCAACGCGGA 61.541 55.000 12.47 0.00 43.61 5.54
2291 2352 1.810030 GGACATCTCCAACGCGGAC 60.810 63.158 12.47 0.00 39.64 4.79
2292 2353 1.810030 GACATCTCCAACGCGGACC 60.810 63.158 12.47 0.00 39.64 4.46
2293 2354 2.511600 CATCTCCAACGCGGACCC 60.512 66.667 12.47 0.00 39.64 4.46
2294 2355 2.683933 ATCTCCAACGCGGACCCT 60.684 61.111 12.47 0.00 39.64 4.34
2295 2356 1.380785 ATCTCCAACGCGGACCCTA 60.381 57.895 12.47 0.00 39.64 3.53
2296 2357 0.974010 ATCTCCAACGCGGACCCTAA 60.974 55.000 12.47 0.00 39.64 2.69
2297 2358 1.186917 TCTCCAACGCGGACCCTAAA 61.187 55.000 12.47 0.00 39.64 1.85
2298 2359 0.320946 CTCCAACGCGGACCCTAAAA 60.321 55.000 12.47 0.00 39.64 1.52
2299 2360 0.603439 TCCAACGCGGACCCTAAAAC 60.603 55.000 12.47 0.00 39.64 2.43
2300 2361 1.579964 CCAACGCGGACCCTAAAACC 61.580 60.000 12.47 0.00 36.56 3.27
2302 2363 2.047939 CGCGGACCCTAAAACCGT 60.048 61.111 0.00 0.00 46.95 4.83
2303 2364 1.668793 CGCGGACCCTAAAACCGTT 60.669 57.895 0.00 0.00 46.95 4.44
2304 2365 1.629345 CGCGGACCCTAAAACCGTTC 61.629 60.000 0.00 0.00 46.95 3.95
2305 2366 0.603439 GCGGACCCTAAAACCGTTCA 60.603 55.000 0.00 0.00 46.95 3.18
2306 2367 1.150827 CGGACCCTAAAACCGTTCAC 58.849 55.000 0.00 0.00 41.47 3.18
2307 2368 1.540797 CGGACCCTAAAACCGTTCACA 60.541 52.381 0.00 0.00 41.47 3.58
2308 2369 2.786777 GGACCCTAAAACCGTTCACAT 58.213 47.619 0.00 0.00 0.00 3.21
2309 2370 2.745821 GGACCCTAAAACCGTTCACATC 59.254 50.000 0.00 0.00 0.00 3.06
2310 2371 3.404899 GACCCTAAAACCGTTCACATCA 58.595 45.455 0.00 0.00 0.00 3.07
2311 2372 3.816523 GACCCTAAAACCGTTCACATCAA 59.183 43.478 0.00 0.00 0.00 2.57
2312 2373 4.208746 ACCCTAAAACCGTTCACATCAAA 58.791 39.130 0.00 0.00 0.00 2.69
2313 2374 4.037089 ACCCTAAAACCGTTCACATCAAAC 59.963 41.667 0.00 0.00 0.00 2.93
2314 2375 4.542735 CCTAAAACCGTTCACATCAAACC 58.457 43.478 0.00 0.00 0.00 3.27
2315 2376 2.766970 AAACCGTTCACATCAAACCG 57.233 45.000 0.00 0.00 0.00 4.44
2316 2377 0.948678 AACCGTTCACATCAAACCGG 59.051 50.000 0.00 0.00 0.00 5.28
2317 2378 0.107081 ACCGTTCACATCAAACCGGA 59.893 50.000 9.46 0.00 0.00 5.14
2318 2379 0.515564 CCGTTCACATCAAACCGGAC 59.484 55.000 9.46 0.00 0.00 4.79
2319 2380 0.515564 CGTTCACATCAAACCGGACC 59.484 55.000 9.46 0.00 0.00 4.46
2320 2381 0.515564 GTTCACATCAAACCGGACCG 59.484 55.000 9.46 6.99 0.00 4.79
2321 2382 0.107081 TTCACATCAAACCGGACCGT 59.893 50.000 9.46 0.00 0.00 4.83
2322 2383 0.967662 TCACATCAAACCGGACCGTA 59.032 50.000 9.46 0.00 0.00 4.02
2323 2384 1.073177 CACATCAAACCGGACCGTAC 58.927 55.000 9.46 0.00 0.00 3.67
2324 2385 0.971386 ACATCAAACCGGACCGTACT 59.029 50.000 9.46 0.00 0.00 2.73
2325 2386 1.337447 ACATCAAACCGGACCGTACTG 60.337 52.381 9.46 6.57 0.00 2.74
2326 2387 0.971386 ATCAAACCGGACCGTACTGT 59.029 50.000 9.46 0.00 0.00 3.55
2327 2388 0.314935 TCAAACCGGACCGTACTGTC 59.685 55.000 9.46 8.79 34.42 3.51
2334 2395 1.505353 GACCGTACTGTCCAGACCG 59.495 63.158 6.17 2.79 0.00 4.79
2335 2396 2.181021 CCGTACTGTCCAGACCGC 59.819 66.667 0.40 0.00 0.00 5.68
2336 2397 2.341101 CCGTACTGTCCAGACCGCT 61.341 63.158 0.40 0.00 0.00 5.52
2337 2398 1.154016 CGTACTGTCCAGACCGCTG 60.154 63.158 0.40 0.00 41.93 5.18
2338 2399 1.583495 CGTACTGTCCAGACCGCTGA 61.583 60.000 0.40 0.00 45.17 4.26
2339 2400 0.601558 GTACTGTCCAGACCGCTGAA 59.398 55.000 0.40 0.00 45.17 3.02
2340 2401 0.888619 TACTGTCCAGACCGCTGAAG 59.111 55.000 0.40 0.00 45.17 3.02
2341 2402 1.115930 ACTGTCCAGACCGCTGAAGT 61.116 55.000 0.40 0.00 45.17 3.01
2342 2403 0.389166 CTGTCCAGACCGCTGAAGTC 60.389 60.000 0.00 0.00 45.17 3.01
2343 2404 1.112916 TGTCCAGACCGCTGAAGTCA 61.113 55.000 0.00 0.00 45.17 3.41
2344 2405 0.247736 GTCCAGACCGCTGAAGTCAT 59.752 55.000 0.00 0.00 45.17 3.06
2345 2406 0.976641 TCCAGACCGCTGAAGTCATT 59.023 50.000 0.00 0.00 45.17 2.57
2346 2407 1.066858 TCCAGACCGCTGAAGTCATTC 60.067 52.381 0.00 0.00 45.17 2.67
2347 2408 1.338105 CCAGACCGCTGAAGTCATTCA 60.338 52.381 0.00 0.00 45.17 2.57
2348 2409 2.416747 CAGACCGCTGAAGTCATTCAA 58.583 47.619 0.00 0.00 44.68 2.69
2349 2410 2.158449 CAGACCGCTGAAGTCATTCAAC 59.842 50.000 0.00 0.00 44.68 3.18
2350 2411 2.143122 GACCGCTGAAGTCATTCAACA 58.857 47.619 0.00 0.00 44.68 3.33
2351 2412 2.744202 GACCGCTGAAGTCATTCAACAT 59.256 45.455 0.00 0.00 44.68 2.71
2352 2413 2.485426 ACCGCTGAAGTCATTCAACATG 59.515 45.455 0.00 0.00 44.68 3.21
2353 2414 2.159476 CCGCTGAAGTCATTCAACATGG 60.159 50.000 0.00 0.00 44.68 3.66
2354 2415 2.159476 CGCTGAAGTCATTCAACATGGG 60.159 50.000 0.00 0.00 44.68 4.00
2355 2416 3.084039 GCTGAAGTCATTCAACATGGGA 58.916 45.455 0.00 0.00 44.68 4.37
2356 2417 3.119708 GCTGAAGTCATTCAACATGGGAC 60.120 47.826 0.00 0.00 44.68 4.46
2357 2418 4.330250 CTGAAGTCATTCAACATGGGACT 58.670 43.478 0.00 0.00 44.68 3.85
2358 2419 4.074259 TGAAGTCATTCAACATGGGACTG 58.926 43.478 0.00 0.00 42.47 3.51
2359 2420 3.795688 AGTCATTCAACATGGGACTGT 57.204 42.857 0.00 0.00 37.43 3.55
2360 2421 4.908601 AGTCATTCAACATGGGACTGTA 57.091 40.909 0.00 0.00 37.43 2.74
2361 2422 5.441718 AGTCATTCAACATGGGACTGTAT 57.558 39.130 0.00 0.00 37.43 2.29
2362 2423 5.431765 AGTCATTCAACATGGGACTGTATC 58.568 41.667 0.00 0.00 37.43 2.24
2363 2424 5.045651 AGTCATTCAACATGGGACTGTATCA 60.046 40.000 0.00 0.00 37.43 2.15
2364 2425 5.824624 GTCATTCAACATGGGACTGTATCAT 59.175 40.000 0.00 0.00 0.00 2.45
2365 2426 6.017605 GTCATTCAACATGGGACTGTATCATC 60.018 42.308 0.00 0.00 0.00 2.92
2366 2427 5.434182 TTCAACATGGGACTGTATCATCA 57.566 39.130 0.00 0.00 0.00 3.07
2367 2428 5.027293 TCAACATGGGACTGTATCATCAG 57.973 43.478 0.00 0.00 40.80 2.90
2368 2429 4.132336 CAACATGGGACTGTATCATCAGG 58.868 47.826 0.00 0.00 39.48 3.86
2369 2430 2.105477 ACATGGGACTGTATCATCAGGC 59.895 50.000 0.00 0.00 42.26 4.85
2372 2433 3.595691 GACTGTATCATCAGGCCCG 57.404 57.895 0.00 0.00 37.49 6.13
2373 2434 0.034059 GACTGTATCATCAGGCCCGG 59.966 60.000 0.00 0.00 37.49 5.73
2374 2435 1.372683 CTGTATCATCAGGCCCGGG 59.627 63.158 19.09 19.09 0.00 5.73
2375 2436 2.032681 GTATCATCAGGCCCGGGC 59.967 66.667 38.57 38.57 41.06 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.450419 CAGAGAGAACCAACTCAACATGTC 59.550 45.833 0.00 0.00 39.14 3.06
2 3 4.141620 ACAGAGAGAACCAACTCAACATGT 60.142 41.667 0.00 0.00 39.14 3.21
3 4 4.384056 ACAGAGAGAACCAACTCAACATG 58.616 43.478 0.00 0.00 39.14 3.21
5 6 3.706594 AGACAGAGAGAACCAACTCAACA 59.293 43.478 0.00 0.00 39.14 3.33
6 7 4.329462 AGACAGAGAGAACCAACTCAAC 57.671 45.455 0.00 0.00 39.14 3.18
7 8 4.651503 AGAAGACAGAGAGAACCAACTCAA 59.348 41.667 0.00 0.00 39.14 3.02
8 9 4.038522 CAGAAGACAGAGAGAACCAACTCA 59.961 45.833 0.00 0.00 39.14 3.41
9 10 4.279671 TCAGAAGACAGAGAGAACCAACTC 59.720 45.833 0.00 0.00 37.19 3.01
10 11 4.219115 TCAGAAGACAGAGAGAACCAACT 58.781 43.478 0.00 0.00 0.00 3.16
11 12 4.555262 CTCAGAAGACAGAGAGAACCAAC 58.445 47.826 0.00 0.00 32.51 3.77
12 13 3.576118 CCTCAGAAGACAGAGAGAACCAA 59.424 47.826 0.00 0.00 32.51 3.67
13 14 3.161067 CCTCAGAAGACAGAGAGAACCA 58.839 50.000 0.00 0.00 32.51 3.67
14 15 2.495669 CCCTCAGAAGACAGAGAGAACC 59.504 54.545 0.00 0.00 32.51 3.62
15 16 2.495669 CCCCTCAGAAGACAGAGAGAAC 59.504 54.545 0.00 0.00 32.51 3.01
16 17 2.558575 CCCCCTCAGAAGACAGAGAGAA 60.559 54.545 0.00 0.00 32.51 2.87
17 18 1.006519 CCCCCTCAGAAGACAGAGAGA 59.993 57.143 0.00 0.00 32.51 3.10
18 19 1.272985 ACCCCCTCAGAAGACAGAGAG 60.273 57.143 0.00 0.00 32.51 3.20
19 20 0.787084 ACCCCCTCAGAAGACAGAGA 59.213 55.000 0.00 0.00 32.51 3.10
20 21 0.901124 CACCCCCTCAGAAGACAGAG 59.099 60.000 0.00 0.00 0.00 3.35
21 22 0.487325 TCACCCCCTCAGAAGACAGA 59.513 55.000 0.00 0.00 0.00 3.41
22 23 1.352083 TTCACCCCCTCAGAAGACAG 58.648 55.000 0.00 0.00 0.00 3.51
23 24 1.630369 CATTCACCCCCTCAGAAGACA 59.370 52.381 0.00 0.00 0.00 3.41
24 25 1.680249 GCATTCACCCCCTCAGAAGAC 60.680 57.143 0.00 0.00 0.00 3.01
25 26 0.620556 GCATTCACCCCCTCAGAAGA 59.379 55.000 0.00 0.00 0.00 2.87
26 27 0.329261 TGCATTCACCCCCTCAGAAG 59.671 55.000 0.00 0.00 0.00 2.85
27 28 0.776810 TTGCATTCACCCCCTCAGAA 59.223 50.000 0.00 0.00 0.00 3.02
28 29 0.776810 TTTGCATTCACCCCCTCAGA 59.223 50.000 0.00 0.00 0.00 3.27
29 30 1.180029 CTTTGCATTCACCCCCTCAG 58.820 55.000 0.00 0.00 0.00 3.35
30 31 0.899717 GCTTTGCATTCACCCCCTCA 60.900 55.000 0.00 0.00 0.00 3.86
31 32 0.899717 TGCTTTGCATTCACCCCCTC 60.900 55.000 0.00 0.00 31.71 4.30
32 33 0.901580 CTGCTTTGCATTCACCCCCT 60.902 55.000 0.00 0.00 38.13 4.79
33 34 1.187567 ACTGCTTTGCATTCACCCCC 61.188 55.000 0.00 0.00 38.13 5.40
34 35 0.244721 GACTGCTTTGCATTCACCCC 59.755 55.000 5.27 0.00 37.98 4.95
35 36 1.251251 AGACTGCTTTGCATTCACCC 58.749 50.000 11.39 0.00 40.03 4.61
36 37 4.708726 AATAGACTGCTTTGCATTCACC 57.291 40.909 11.39 0.00 40.03 4.02
37 38 5.741040 GCTTAATAGACTGCTTTGCATTCAC 59.259 40.000 11.39 0.00 40.03 3.18
38 39 5.163622 GGCTTAATAGACTGCTTTGCATTCA 60.164 40.000 11.39 0.50 40.03 2.57
39 40 5.163622 TGGCTTAATAGACTGCTTTGCATTC 60.164 40.000 2.34 2.34 38.13 2.67
40 41 4.706476 TGGCTTAATAGACTGCTTTGCATT 59.294 37.500 0.00 0.00 38.13 3.56
41 42 4.272489 TGGCTTAATAGACTGCTTTGCAT 58.728 39.130 0.00 0.00 38.13 3.96
42 43 3.684908 TGGCTTAATAGACTGCTTTGCA 58.315 40.909 0.00 0.00 36.92 4.08
43 44 3.065925 CCTGGCTTAATAGACTGCTTTGC 59.934 47.826 0.00 0.00 0.00 3.68
44 45 3.065925 GCCTGGCTTAATAGACTGCTTTG 59.934 47.826 12.43 0.00 0.00 2.77
45 46 3.282885 GCCTGGCTTAATAGACTGCTTT 58.717 45.455 12.43 0.00 0.00 3.51
46 47 2.239654 TGCCTGGCTTAATAGACTGCTT 59.760 45.455 21.03 0.00 31.58 3.91
47 48 1.839994 TGCCTGGCTTAATAGACTGCT 59.160 47.619 21.03 0.00 31.58 4.24
48 49 1.943340 GTGCCTGGCTTAATAGACTGC 59.057 52.381 21.03 0.00 0.00 4.40
49 50 3.550437 AGTGCCTGGCTTAATAGACTG 57.450 47.619 21.03 0.00 0.00 3.51
50 51 5.615289 CAATAGTGCCTGGCTTAATAGACT 58.385 41.667 21.03 14.77 0.00 3.24
51 52 4.214332 GCAATAGTGCCTGGCTTAATAGAC 59.786 45.833 21.03 7.61 45.68 2.59
52 53 4.389374 GCAATAGTGCCTGGCTTAATAGA 58.611 43.478 21.03 0.00 45.68 1.98
53 54 4.756084 GCAATAGTGCCTGGCTTAATAG 57.244 45.455 21.03 7.24 45.68 1.73
66 67 6.426980 TGTCAATTTAGCTCAGCAATAGTG 57.573 37.500 0.00 0.00 0.00 2.74
67 68 7.452880 TTTGTCAATTTAGCTCAGCAATAGT 57.547 32.000 0.00 0.00 0.00 2.12
68 69 8.746922 TTTTTGTCAATTTAGCTCAGCAATAG 57.253 30.769 0.00 0.00 0.00 1.73
91 92 9.695155 ACTACAACTATGGCTACCAATATTTTT 57.305 29.630 0.00 0.00 36.95 1.94
92 93 9.695155 AACTACAACTATGGCTACCAATATTTT 57.305 29.630 0.00 0.00 36.95 1.82
93 94 9.695155 AAACTACAACTATGGCTACCAATATTT 57.305 29.630 0.00 0.00 36.95 1.40
96 97 9.826574 CTTAAACTACAACTATGGCTACCAATA 57.173 33.333 0.00 0.00 36.95 1.90
97 98 8.326529 ACTTAAACTACAACTATGGCTACCAAT 58.673 33.333 0.00 0.00 36.95 3.16
98 99 7.682628 ACTTAAACTACAACTATGGCTACCAA 58.317 34.615 0.00 0.00 36.95 3.67
99 100 7.248743 ACTTAAACTACAACTATGGCTACCA 57.751 36.000 0.00 0.00 38.19 3.25
100 101 8.473219 ACTACTTAAACTACAACTATGGCTACC 58.527 37.037 0.00 0.00 0.00 3.18
103 104 8.196103 GCTACTACTTAAACTACAACTATGGCT 58.804 37.037 0.00 0.00 0.00 4.75
104 105 7.167136 CGCTACTACTTAAACTACAACTATGGC 59.833 40.741 0.00 0.00 0.00 4.40
105 106 8.400947 TCGCTACTACTTAAACTACAACTATGG 58.599 37.037 0.00 0.00 0.00 2.74
106 107 9.435802 CTCGCTACTACTTAAACTACAACTATG 57.564 37.037 0.00 0.00 0.00 2.23
107 108 9.171877 ACTCGCTACTACTTAAACTACAACTAT 57.828 33.333 0.00 0.00 0.00 2.12
108 109 8.553459 ACTCGCTACTACTTAAACTACAACTA 57.447 34.615 0.00 0.00 0.00 2.24
109 110 7.446001 ACTCGCTACTACTTAAACTACAACT 57.554 36.000 0.00 0.00 0.00 3.16
110 111 7.592903 ACAACTCGCTACTACTTAAACTACAAC 59.407 37.037 0.00 0.00 0.00 3.32
111 112 7.651808 ACAACTCGCTACTACTTAAACTACAA 58.348 34.615 0.00 0.00 0.00 2.41
112 113 7.173907 AGACAACTCGCTACTACTTAAACTACA 59.826 37.037 0.00 0.00 0.00 2.74
113 114 7.481169 CAGACAACTCGCTACTACTTAAACTAC 59.519 40.741 0.00 0.00 0.00 2.73
114 115 7.388776 TCAGACAACTCGCTACTACTTAAACTA 59.611 37.037 0.00 0.00 0.00 2.24
115 116 6.206243 TCAGACAACTCGCTACTACTTAAACT 59.794 38.462 0.00 0.00 0.00 2.66
116 117 6.376978 TCAGACAACTCGCTACTACTTAAAC 58.623 40.000 0.00 0.00 0.00 2.01
117 118 6.564709 TCAGACAACTCGCTACTACTTAAA 57.435 37.500 0.00 0.00 0.00 1.52
118 119 6.754702 ATCAGACAACTCGCTACTACTTAA 57.245 37.500 0.00 0.00 0.00 1.85
119 120 7.498239 ACATATCAGACAACTCGCTACTACTTA 59.502 37.037 0.00 0.00 0.00 2.24
120 121 6.319152 ACATATCAGACAACTCGCTACTACTT 59.681 38.462 0.00 0.00 0.00 2.24
121 122 5.823570 ACATATCAGACAACTCGCTACTACT 59.176 40.000 0.00 0.00 0.00 2.57
122 123 6.062434 ACATATCAGACAACTCGCTACTAC 57.938 41.667 0.00 0.00 0.00 2.73
123 124 7.981102 ATACATATCAGACAACTCGCTACTA 57.019 36.000 0.00 0.00 0.00 1.82
124 125 6.885952 ATACATATCAGACAACTCGCTACT 57.114 37.500 0.00 0.00 0.00 2.57
125 126 9.119329 CTTTATACATATCAGACAACTCGCTAC 57.881 37.037 0.00 0.00 0.00 3.58
126 127 9.063615 TCTTTATACATATCAGACAACTCGCTA 57.936 33.333 0.00 0.00 0.00 4.26
127 128 7.941919 TCTTTATACATATCAGACAACTCGCT 58.058 34.615 0.00 0.00 0.00 4.93
128 129 7.148885 GCTCTTTATACATATCAGACAACTCGC 60.149 40.741 0.00 0.00 0.00 5.03
129 130 7.327275 GGCTCTTTATACATATCAGACAACTCG 59.673 40.741 0.00 0.00 0.00 4.18
130 131 7.600752 GGGCTCTTTATACATATCAGACAACTC 59.399 40.741 0.00 0.00 0.00 3.01
131 132 7.445945 GGGCTCTTTATACATATCAGACAACT 58.554 38.462 0.00 0.00 0.00 3.16
132 133 6.366332 CGGGCTCTTTATACATATCAGACAAC 59.634 42.308 0.00 0.00 0.00 3.32
133 134 6.041637 ACGGGCTCTTTATACATATCAGACAA 59.958 38.462 0.00 0.00 0.00 3.18
134 135 5.538813 ACGGGCTCTTTATACATATCAGACA 59.461 40.000 0.00 0.00 0.00 3.41
135 136 6.026947 ACGGGCTCTTTATACATATCAGAC 57.973 41.667 0.00 0.00 0.00 3.51
136 137 6.455647 CAACGGGCTCTTTATACATATCAGA 58.544 40.000 0.00 0.00 0.00 3.27
137 138 5.120830 GCAACGGGCTCTTTATACATATCAG 59.879 44.000 0.00 0.00 40.25 2.90
138 139 4.994852 GCAACGGGCTCTTTATACATATCA 59.005 41.667 0.00 0.00 40.25 2.15
139 140 4.994852 TGCAACGGGCTCTTTATACATATC 59.005 41.667 3.00 0.00 45.15 1.63
140 141 4.968259 TGCAACGGGCTCTTTATACATAT 58.032 39.130 3.00 0.00 45.15 1.78
141 142 4.409718 TGCAACGGGCTCTTTATACATA 57.590 40.909 3.00 0.00 45.15 2.29
142 143 3.275617 TGCAACGGGCTCTTTATACAT 57.724 42.857 3.00 0.00 45.15 2.29
143 144 2.745281 GTTGCAACGGGCTCTTTATACA 59.255 45.455 14.90 0.00 45.15 2.29
144 145 3.007635 AGTTGCAACGGGCTCTTTATAC 58.992 45.455 23.21 0.00 45.15 1.47
145 146 3.006940 CAGTTGCAACGGGCTCTTTATA 58.993 45.455 23.21 0.00 45.15 0.98
146 147 1.812571 CAGTTGCAACGGGCTCTTTAT 59.187 47.619 23.21 0.00 45.15 1.40
147 148 1.202710 TCAGTTGCAACGGGCTCTTTA 60.203 47.619 26.08 5.51 45.15 1.85
148 149 0.465460 TCAGTTGCAACGGGCTCTTT 60.465 50.000 26.08 3.96 45.15 2.52
149 150 0.886490 CTCAGTTGCAACGGGCTCTT 60.886 55.000 26.08 4.70 45.15 2.85
150 151 1.302033 CTCAGTTGCAACGGGCTCT 60.302 57.895 26.08 5.44 45.15 4.09
151 152 2.970974 GCTCAGTTGCAACGGGCTC 61.971 63.158 27.65 15.80 45.15 4.70
152 153 2.980233 GCTCAGTTGCAACGGGCT 60.980 61.111 27.65 10.40 45.15 5.19
153 154 4.043200 GGCTCAGTTGCAACGGGC 62.043 66.667 27.28 27.28 45.13 6.13
154 155 3.365265 GGGCTCAGTTGCAACGGG 61.365 66.667 26.08 20.61 34.04 5.28
155 156 3.726517 CGGGCTCAGTTGCAACGG 61.727 66.667 23.21 22.52 33.48 4.44
156 157 2.542907 AACGGGCTCAGTTGCAACG 61.543 57.895 23.21 17.58 39.50 4.10
157 158 1.008538 CAACGGGCTCAGTTGCAAC 60.009 57.895 22.17 22.17 41.77 4.17
158 159 3.431055 CAACGGGCTCAGTTGCAA 58.569 55.556 8.07 0.00 41.77 4.08
168 169 2.715737 TTGTCAATTTAGCAACGGGC 57.284 45.000 0.00 0.00 45.30 6.13
187 188 4.278170 TCAAGTGACATTGGCGATCTTTTT 59.722 37.500 0.00 0.00 0.00 1.94
188 189 3.820467 TCAAGTGACATTGGCGATCTTTT 59.180 39.130 0.00 0.00 0.00 2.27
189 190 3.411446 TCAAGTGACATTGGCGATCTTT 58.589 40.909 0.00 0.00 0.00 2.52
190 191 3.057969 TCAAGTGACATTGGCGATCTT 57.942 42.857 0.00 0.00 0.00 2.40
191 192 2.768253 TCAAGTGACATTGGCGATCT 57.232 45.000 0.00 0.00 0.00 2.75
192 193 4.512944 ACATATCAAGTGACATTGGCGATC 59.487 41.667 0.00 0.00 0.00 3.69
193 194 4.454678 ACATATCAAGTGACATTGGCGAT 58.545 39.130 0.00 0.00 0.00 4.58
194 195 3.872696 ACATATCAAGTGACATTGGCGA 58.127 40.909 0.00 0.00 0.00 5.54
195 196 5.466393 TCATACATATCAAGTGACATTGGCG 59.534 40.000 0.00 0.00 0.00 5.69
196 197 6.707608 TCTCATACATATCAAGTGACATTGGC 59.292 38.462 0.00 0.00 0.00 4.52
197 198 8.667076 TTCTCATACATATCAAGTGACATTGG 57.333 34.615 0.00 0.00 0.00 3.16
252 253 9.457436 GGGACCATATTAACTTTAAGAGTTCAA 57.543 33.333 0.00 2.81 45.40 2.69
253 254 8.607713 TGGGACCATATTAACTTTAAGAGTTCA 58.392 33.333 0.00 0.00 45.40 3.18
254 255 9.628500 ATGGGACCATATTAACTTTAAGAGTTC 57.372 33.333 1.09 0.00 40.20 3.01
255 256 9.990868 AATGGGACCATATTAACTTTAAGAGTT 57.009 29.630 3.92 7.76 42.52 3.01
256 257 9.408648 CAATGGGACCATATTAACTTTAAGAGT 57.591 33.333 3.92 0.00 36.42 3.24
257 258 8.352942 GCAATGGGACCATATTAACTTTAAGAG 58.647 37.037 3.92 0.00 35.31 2.85
258 259 7.836685 TGCAATGGGACCATATTAACTTTAAGA 59.163 33.333 3.92 0.00 35.31 2.10
259 260 8.006298 TGCAATGGGACCATATTAACTTTAAG 57.994 34.615 3.92 0.00 35.31 1.85
260 261 7.962995 TGCAATGGGACCATATTAACTTTAA 57.037 32.000 3.92 0.00 35.31 1.52
261 262 7.415765 CGTTGCAATGGGACCATATTAACTTTA 60.416 37.037 11.00 0.00 35.31 1.85
262 263 6.627065 CGTTGCAATGGGACCATATTAACTTT 60.627 38.462 11.00 0.00 35.31 2.66
263 264 5.163561 CGTTGCAATGGGACCATATTAACTT 60.164 40.000 11.00 0.00 35.31 2.66
264 265 4.338118 CGTTGCAATGGGACCATATTAACT 59.662 41.667 11.00 0.00 35.31 2.24
265 266 4.606961 CGTTGCAATGGGACCATATTAAC 58.393 43.478 11.00 8.80 35.31 2.01
266 267 3.067461 GCGTTGCAATGGGACCATATTAA 59.933 43.478 19.93 0.00 35.31 1.40
267 268 2.621055 GCGTTGCAATGGGACCATATTA 59.379 45.455 19.93 0.00 35.31 0.98
268 269 1.408702 GCGTTGCAATGGGACCATATT 59.591 47.619 19.93 0.00 35.31 1.28
269 270 1.032014 GCGTTGCAATGGGACCATAT 58.968 50.000 19.93 0.00 35.31 1.78
270 271 0.322906 TGCGTTGCAATGGGACCATA 60.323 50.000 19.93 0.00 34.76 2.74
271 272 1.606025 TGCGTTGCAATGGGACCAT 60.606 52.632 19.93 0.00 34.76 3.55
272 273 2.203408 TGCGTTGCAATGGGACCA 60.203 55.556 19.93 6.69 34.76 4.02
273 274 2.258286 GTGCGTTGCAATGGGACC 59.742 61.111 19.93 4.08 41.47 4.46
274 275 2.126888 CGTGCGTTGCAATGGGAC 60.127 61.111 19.93 16.01 41.47 4.46
275 276 3.361158 CCGTGCGTTGCAATGGGA 61.361 61.111 19.93 5.70 41.47 4.37
276 277 4.418401 CCCGTGCGTTGCAATGGG 62.418 66.667 19.93 9.83 45.52 4.00
287 288 0.669625 AACTAGAAGAACGCCCGTGC 60.670 55.000 0.00 0.00 0.00 5.34
288 289 1.336517 TGAACTAGAAGAACGCCCGTG 60.337 52.381 0.00 0.00 0.00 4.94
289 290 0.963962 TGAACTAGAAGAACGCCCGT 59.036 50.000 0.00 0.00 0.00 5.28
290 291 1.725164 GTTGAACTAGAAGAACGCCCG 59.275 52.381 0.00 0.00 0.00 6.13
291 292 3.041508 AGTTGAACTAGAAGAACGCCC 57.958 47.619 0.00 0.00 0.00 6.13
292 293 5.867716 TGATTAGTTGAACTAGAAGAACGCC 59.132 40.000 5.10 0.00 31.47 5.68
293 294 6.946229 TGATTAGTTGAACTAGAAGAACGC 57.054 37.500 5.10 0.00 31.47 4.84
294 295 8.467402 ACATGATTAGTTGAACTAGAAGAACG 57.533 34.615 5.10 0.00 31.47 3.95
303 304 8.400947 GCAATGATGTACATGATTAGTTGAACT 58.599 33.333 18.44 2.37 39.39 3.01
304 305 7.645340 GGCAATGATGTACATGATTAGTTGAAC 59.355 37.037 18.44 3.82 39.39 3.18
310 311 5.929697 ACGGCAATGATGTACATGATTAG 57.070 39.130 18.44 14.88 39.39 1.73
341 345 5.340027 CCAAACATAGACCCTCCTTACCATT 60.340 44.000 0.00 0.00 0.00 3.16
343 347 3.521937 CCAAACATAGACCCTCCTTACCA 59.478 47.826 0.00 0.00 0.00 3.25
383 387 8.243426 GCCAAACATTATCTGTAGTGAAATTCA 58.757 33.333 0.00 0.00 36.98 2.57
463 468 9.816354 GACCCAATGTAAAGCATATAATTGTTT 57.184 29.630 0.00 0.00 36.67 2.83
477 486 7.283580 CCGTTCCAAATATAGACCCAATGTAAA 59.716 37.037 0.00 0.00 0.00 2.01
485 494 4.684484 ACTCCGTTCCAAATATAGACCC 57.316 45.455 0.00 0.00 0.00 4.46
504 513 6.183360 GGCATCAAACCAATTATGCTCTTACT 60.183 38.462 8.17 0.00 43.33 2.24
505 514 5.979517 GGCATCAAACCAATTATGCTCTTAC 59.020 40.000 8.17 0.00 43.33 2.34
510 519 4.822685 TTGGCATCAAACCAATTATGCT 57.177 36.364 8.17 0.00 42.23 3.79
517 526 4.125703 GTCAAATGTTGGCATCAAACCAA 58.874 39.130 1.83 0.00 44.86 3.67
518 527 3.133542 TGTCAAATGTTGGCATCAAACCA 59.866 39.130 1.83 0.00 40.96 3.67
519 528 3.726607 TGTCAAATGTTGGCATCAAACC 58.273 40.909 1.83 0.00 40.96 3.27
527 536 2.166821 TGGCAATGTCAAATGTTGGC 57.833 45.000 4.04 4.04 45.38 4.52
528 537 6.988622 AATATTGGCAATGTCAAATGTTGG 57.011 33.333 22.57 0.00 28.60 3.77
530 539 7.380431 CCAAATATTGGCAATGTCAAATGTT 57.620 32.000 22.57 3.43 45.17 2.71
531 540 6.988622 CCAAATATTGGCAATGTCAAATGT 57.011 33.333 22.57 0.00 45.17 2.71
546 555 4.701171 CCAAATGTTGGCTTGCCAAATATT 59.299 37.500 26.12 23.52 45.17 1.28
547 556 4.263435 CCAAATGTTGGCTTGCCAAATAT 58.737 39.130 26.12 19.92 45.17 1.28
548 557 3.672808 CCAAATGTTGGCTTGCCAAATA 58.327 40.909 26.12 18.73 45.17 1.40
549 558 2.506444 CCAAATGTTGGCTTGCCAAAT 58.494 42.857 26.12 18.32 45.17 2.32
550 559 1.964552 CCAAATGTTGGCTTGCCAAA 58.035 45.000 26.12 17.09 45.17 3.28
551 560 3.702147 CCAAATGTTGGCTTGCCAA 57.298 47.368 21.59 21.59 45.17 4.52
561 570 6.035217 GCAACTTTTGATTTTGCCAAATGTT 58.965 32.000 0.00 5.81 44.92 2.71
562 571 5.580661 GCAACTTTTGATTTTGCCAAATGT 58.419 33.333 0.00 0.00 40.94 2.71
585 594 5.355596 TCACAAAAAGTTGCCAACATTAGG 58.644 37.500 10.69 2.97 38.39 2.69
586 595 5.463061 CCTCACAAAAAGTTGCCAACATTAG 59.537 40.000 10.69 3.68 38.39 1.73
589 598 3.197549 ACCTCACAAAAAGTTGCCAACAT 59.802 39.130 10.69 0.00 38.39 2.71
590 599 2.564947 ACCTCACAAAAAGTTGCCAACA 59.435 40.909 10.69 0.00 38.39 3.33
591 600 3.245518 ACCTCACAAAAAGTTGCCAAC 57.754 42.857 0.00 0.00 38.39 3.77
592 601 3.259374 TCAACCTCACAAAAAGTTGCCAA 59.741 39.130 0.00 0.00 39.51 4.52
594 603 3.130340 TCTCAACCTCACAAAAAGTTGCC 59.870 43.478 0.00 0.00 39.51 4.52
595 604 4.370364 TCTCAACCTCACAAAAAGTTGC 57.630 40.909 0.00 0.00 39.51 4.17
596 605 6.194796 TCTTCTCAACCTCACAAAAAGTTG 57.805 37.500 0.00 0.00 40.72 3.16
599 608 7.315890 ACTTTTCTTCTCAACCTCACAAAAAG 58.684 34.615 0.00 0.00 37.27 2.27
600 609 7.227049 ACTTTTCTTCTCAACCTCACAAAAA 57.773 32.000 0.00 0.00 0.00 1.94
601 610 6.834168 ACTTTTCTTCTCAACCTCACAAAA 57.166 33.333 0.00 0.00 0.00 2.44
603 612 5.125417 CCAACTTTTCTTCTCAACCTCACAA 59.875 40.000 0.00 0.00 0.00 3.33
604 613 4.640201 CCAACTTTTCTTCTCAACCTCACA 59.360 41.667 0.00 0.00 0.00 3.58
605 614 4.640647 ACCAACTTTTCTTCTCAACCTCAC 59.359 41.667 0.00 0.00 0.00 3.51
606 615 4.855340 ACCAACTTTTCTTCTCAACCTCA 58.145 39.130 0.00 0.00 0.00 3.86
607 616 6.056236 ACTACCAACTTTTCTTCTCAACCTC 58.944 40.000 0.00 0.00 0.00 3.85
608 617 6.002653 ACTACCAACTTTTCTTCTCAACCT 57.997 37.500 0.00 0.00 0.00 3.50
609 618 5.820947 TGACTACCAACTTTTCTTCTCAACC 59.179 40.000 0.00 0.00 0.00 3.77
610 619 6.920569 TGACTACCAACTTTTCTTCTCAAC 57.079 37.500 0.00 0.00 0.00 3.18
627 636 4.202245 TGGCTAGTGATTGGTTGACTAC 57.798 45.455 0.00 0.00 0.00 2.73
628 637 4.041075 TGTTGGCTAGTGATTGGTTGACTA 59.959 41.667 0.00 0.00 0.00 2.59
629 638 3.181445 TGTTGGCTAGTGATTGGTTGACT 60.181 43.478 0.00 0.00 0.00 3.41
632 641 4.789012 AATGTTGGCTAGTGATTGGTTG 57.211 40.909 0.00 0.00 0.00 3.77
633 642 4.021192 CCAAATGTTGGCTAGTGATTGGTT 60.021 41.667 0.00 0.00 45.17 3.67
634 643 3.511146 CCAAATGTTGGCTAGTGATTGGT 59.489 43.478 0.00 0.00 45.17 3.67
635 644 4.114058 CCAAATGTTGGCTAGTGATTGG 57.886 45.455 0.00 0.00 45.17 3.16
687 696 0.740149 GCATGATTGGTTCGATGCCA 59.260 50.000 0.00 5.26 35.03 4.92
688 697 1.002033 GAGCATGATTGGTTCGATGCC 60.002 52.381 0.00 0.05 38.53 4.40
689 698 1.945394 AGAGCATGATTGGTTCGATGC 59.055 47.619 0.00 0.00 38.28 3.91
690 699 4.813161 ACTTAGAGCATGATTGGTTCGATG 59.187 41.667 0.00 0.00 32.62 3.84
691 700 5.028549 ACTTAGAGCATGATTGGTTCGAT 57.971 39.130 0.00 0.00 32.62 3.59
692 701 4.433615 GACTTAGAGCATGATTGGTTCGA 58.566 43.478 0.00 0.00 32.62 3.71
693 702 3.557595 GGACTTAGAGCATGATTGGTTCG 59.442 47.826 0.00 0.00 32.62 3.95
694 703 4.517285 TGGACTTAGAGCATGATTGGTTC 58.483 43.478 0.00 0.00 32.62 3.62
695 704 4.225942 TCTGGACTTAGAGCATGATTGGTT 59.774 41.667 0.00 0.00 32.62 3.67
696 705 3.776969 TCTGGACTTAGAGCATGATTGGT 59.223 43.478 0.00 0.00 35.95 3.67
697 706 4.125703 GTCTGGACTTAGAGCATGATTGG 58.874 47.826 0.00 0.00 0.00 3.16
698 707 4.569966 GTGTCTGGACTTAGAGCATGATTG 59.430 45.833 0.00 0.00 0.00 2.67
699 708 4.223700 TGTGTCTGGACTTAGAGCATGATT 59.776 41.667 0.00 0.00 0.00 2.57
700 709 3.771479 TGTGTCTGGACTTAGAGCATGAT 59.229 43.478 0.00 0.00 0.00 2.45
701 710 3.165071 TGTGTCTGGACTTAGAGCATGA 58.835 45.455 0.00 0.00 0.00 3.07
702 711 3.519579 CTGTGTCTGGACTTAGAGCATG 58.480 50.000 2.38 0.00 0.00 4.06
703 712 2.093764 GCTGTGTCTGGACTTAGAGCAT 60.094 50.000 2.38 0.00 0.00 3.79
704 713 1.273606 GCTGTGTCTGGACTTAGAGCA 59.726 52.381 2.38 0.00 0.00 4.26
705 714 1.273606 TGCTGTGTCTGGACTTAGAGC 59.726 52.381 2.38 3.41 0.00 4.09
706 715 3.667497 TTGCTGTGTCTGGACTTAGAG 57.333 47.619 2.38 0.00 0.00 2.43
707 716 4.415881 TTTTGCTGTGTCTGGACTTAGA 57.584 40.909 2.38 0.00 0.00 2.10
708 717 5.695851 AATTTTGCTGTGTCTGGACTTAG 57.304 39.130 2.38 2.31 0.00 2.18
709 718 6.463995 AAAATTTTGCTGTGTCTGGACTTA 57.536 33.333 1.75 0.00 0.00 2.24
710 719 5.343307 AAAATTTTGCTGTGTCTGGACTT 57.657 34.783 1.75 0.00 0.00 3.01
711 720 6.463995 TTAAAATTTTGCTGTGTCTGGACT 57.536 33.333 13.76 0.00 0.00 3.85
712 721 8.082242 ACTATTAAAATTTTGCTGTGTCTGGAC 58.918 33.333 13.76 0.00 0.00 4.02
713 722 8.177119 ACTATTAAAATTTTGCTGTGTCTGGA 57.823 30.769 13.76 0.00 0.00 3.86
714 723 9.341899 GTACTATTAAAATTTTGCTGTGTCTGG 57.658 33.333 13.76 0.00 0.00 3.86
730 739 9.685276 TGTGGCACTACTAGTAGTACTATTAAA 57.315 33.333 30.34 12.20 43.98 1.52
731 740 9.685276 TTGTGGCACTACTAGTAGTACTATTAA 57.315 33.333 30.34 19.51 43.98 1.40
732 741 9.334947 CTTGTGGCACTACTAGTAGTACTATTA 57.665 37.037 30.34 15.71 43.98 0.98
733 742 7.284944 CCTTGTGGCACTACTAGTAGTACTATT 59.715 40.741 30.34 8.71 43.98 1.73
734 743 6.771749 CCTTGTGGCACTACTAGTAGTACTAT 59.228 42.308 30.34 9.41 43.98 2.12
735 744 6.070021 TCCTTGTGGCACTACTAGTAGTACTA 60.070 42.308 30.34 22.00 43.98 1.82
736 745 4.948621 CCTTGTGGCACTACTAGTAGTACT 59.051 45.833 30.34 10.11 43.98 2.73
761 770 2.125106 GGTCGTCCCCTGTGCATC 60.125 66.667 0.00 0.00 0.00 3.91
787 797 0.465642 GGTTTAGAAGGCGGGGGATG 60.466 60.000 0.00 0.00 0.00 3.51
848 858 2.739996 CCGATGGCTGGCCTTCTCT 61.740 63.158 20.15 0.00 37.91 3.10
868 878 1.533273 GACCAGGGCTAGCGGGATA 60.533 63.158 21.29 0.00 0.00 2.59
873 883 1.327690 TAGTTGGACCAGGGCTAGCG 61.328 60.000 9.00 0.00 0.00 4.26
876 886 4.080186 GGTTTTATAGTTGGACCAGGGCTA 60.080 45.833 0.00 0.00 0.00 3.93
929 939 0.965363 GGTAGGCAATGGTGTGTGGG 60.965 60.000 0.00 0.00 0.00 4.61
1032 1049 2.042435 AGGAAGGCGAGGAGAGGG 60.042 66.667 0.00 0.00 0.00 4.30
1046 1066 1.909141 GACGACGACGAAGCAGAGGA 61.909 60.000 15.32 0.00 42.66 3.71
1054 1074 2.037136 GGAGGAGGACGACGACGAA 61.037 63.158 15.32 0.00 42.66 3.85
1077 1097 4.048470 GGGTGCAGGGGAAGGACC 62.048 72.222 0.00 0.00 45.63 4.46
1104 1124 4.980805 TCACTTGACGTGGGCGCC 62.981 66.667 21.18 21.18 43.94 6.53
1120 1140 2.155279 GAGCAGAAAGGGGTGAAACTC 58.845 52.381 0.00 0.00 35.65 3.01
1123 1143 0.250727 CGGAGCAGAAAGGGGTGAAA 60.251 55.000 0.00 0.00 0.00 2.69
1126 1146 1.376037 GTCGGAGCAGAAAGGGGTG 60.376 63.158 0.00 0.00 0.00 4.61
1127 1147 1.841556 TGTCGGAGCAGAAAGGGGT 60.842 57.895 0.00 0.00 0.00 4.95
1128 1148 1.376037 GTGTCGGAGCAGAAAGGGG 60.376 63.158 0.00 0.00 0.00 4.79
1186 1206 3.920231 AAAGCAGCTGGATCTATGACA 57.080 42.857 17.12 0.00 0.00 3.58
1188 1208 2.947652 GCAAAAGCAGCTGGATCTATGA 59.052 45.455 17.12 0.00 0.00 2.15
1196 1216 4.060038 CGGGGCAAAAGCAGCTGG 62.060 66.667 17.12 0.00 0.00 4.85
1200 1220 2.339712 CAACCGGGGCAAAAGCAG 59.660 61.111 6.32 0.00 0.00 4.24
1203 1223 4.356442 CGGCAACCGGGGCAAAAG 62.356 66.667 20.09 6.40 44.15 2.27
1278 1298 4.070552 GCTTCAGAGACGGCGGGT 62.071 66.667 13.24 0.00 0.00 5.28
1305 1325 2.885113 CCGTCGTCATCTCCTGCA 59.115 61.111 0.00 0.00 0.00 4.41
1624 1655 5.529581 TCAGTACATGACAGTTGAGTTGA 57.470 39.130 0.00 0.00 31.12 3.18
1625 1656 5.698089 ACATCAGTACATGACAGTTGAGTTG 59.302 40.000 0.00 0.00 41.91 3.16
1626 1657 5.858381 ACATCAGTACATGACAGTTGAGTT 58.142 37.500 0.00 0.00 41.91 3.01
1627 1658 5.474578 ACATCAGTACATGACAGTTGAGT 57.525 39.130 0.00 0.00 41.91 3.41
1760 1802 3.253188 GTGTTAACTGATTGGAGCAAGCA 59.747 43.478 7.22 0.00 37.42 3.91
1781 1823 1.338105 ACGTACAGCATGCATCAGTGT 60.338 47.619 21.98 16.99 42.53 3.55
1787 1829 5.621197 TTTCTTAAACGTACAGCATGCAT 57.379 34.783 21.98 10.24 42.53 3.96
1799 1841 5.858049 TGCTGATTGCTGAATTTCTTAAACG 59.142 36.000 0.00 0.00 43.37 3.60
1809 1856 1.381928 CCCGCTGCTGATTGCTGAAT 61.382 55.000 0.00 0.00 42.27 2.57
1851 1898 2.028130 AGATCTAGCAGGAACAGGACG 58.972 52.381 0.00 0.00 0.00 4.79
1853 1900 2.302260 CGAGATCTAGCAGGAACAGGA 58.698 52.381 0.00 0.00 0.00 3.86
1854 1901 2.028130 ACGAGATCTAGCAGGAACAGG 58.972 52.381 2.33 0.00 0.00 4.00
1855 1902 2.034053 GGACGAGATCTAGCAGGAACAG 59.966 54.545 2.33 0.00 0.00 3.16
1856 1903 2.025155 GGACGAGATCTAGCAGGAACA 58.975 52.381 2.33 0.00 0.00 3.18
1857 1904 1.002251 CGGACGAGATCTAGCAGGAAC 60.002 57.143 2.33 0.00 0.00 3.62
1858 1905 1.134189 TCGGACGAGATCTAGCAGGAA 60.134 52.381 2.33 0.00 0.00 3.36
1859 1906 0.468648 TCGGACGAGATCTAGCAGGA 59.531 55.000 2.33 0.00 0.00 3.86
1860 1907 1.466950 GATCGGACGAGATCTAGCAGG 59.533 57.143 2.33 0.00 42.68 4.85
1861 1908 2.892373 GATCGGACGAGATCTAGCAG 57.108 55.000 2.33 0.00 42.68 4.24
1891 1938 2.125832 ACATGTCGGGTTACGCCG 60.126 61.111 0.00 6.04 43.86 6.46
2035 2084 1.875813 GTCCATCTGTCGAGCAGCG 60.876 63.158 9.34 0.00 44.66 5.18
2060 2112 0.249322 CCCACGTCACGATGGTATCC 60.249 60.000 2.91 0.00 33.80 2.59
2062 2114 1.068588 CATCCCACGTCACGATGGTAT 59.931 52.381 2.91 0.00 33.80 2.73
2063 2115 0.458260 CATCCCACGTCACGATGGTA 59.542 55.000 2.91 0.00 33.80 3.25
2064 2116 1.218047 CATCCCACGTCACGATGGT 59.782 57.895 2.91 0.00 33.80 3.55
2078 2135 1.105759 GGGACAGCATCAAGGCATCC 61.106 60.000 2.39 2.39 39.39 3.51
2086 2143 0.037326 GAACTCACGGGACAGCATCA 60.037 55.000 0.00 0.00 0.00 3.07
2125 2182 1.873903 CGTTGGGATGATCACCGATCC 60.874 57.143 0.00 0.16 38.20 3.36
2199 2260 5.186198 ACATACACAAGTCTTATCAAGGGC 58.814 41.667 0.00 0.00 0.00 5.19
2239 2300 3.411418 ATGCGCGTAGGACGAGTGG 62.411 63.158 8.43 0.00 46.05 4.00
2242 2303 2.722548 CGATGCGCGTAGGACGAG 60.723 66.667 8.43 0.21 46.05 4.18
2267 2328 2.481276 CGCGTTGGAGATGTCCTTATCA 60.481 50.000 10.72 0.00 44.30 2.15
2270 2331 0.174845 CCGCGTTGGAGATGTCCTTA 59.825 55.000 10.72 0.00 44.30 2.69
2283 2344 1.668793 CGGTTTTAGGGTCCGCGTT 60.669 57.895 4.92 0.00 37.90 4.84
2284 2345 2.047939 CGGTTTTAGGGTCCGCGT 60.048 61.111 4.92 0.00 37.90 6.01
2285 2346 1.629345 GAACGGTTTTAGGGTCCGCG 61.629 60.000 0.00 0.00 46.92 6.46
2286 2347 0.603439 TGAACGGTTTTAGGGTCCGC 60.603 55.000 0.00 0.00 46.92 5.54
2288 2349 2.259266 TGTGAACGGTTTTAGGGTCC 57.741 50.000 0.00 0.00 0.00 4.46
2289 2350 3.404899 TGATGTGAACGGTTTTAGGGTC 58.595 45.455 0.00 0.00 0.00 4.46
2290 2351 3.495434 TGATGTGAACGGTTTTAGGGT 57.505 42.857 0.00 0.00 0.00 4.34
2291 2352 4.542735 GTTTGATGTGAACGGTTTTAGGG 58.457 43.478 0.00 0.00 0.00 3.53
2292 2353 4.542735 GGTTTGATGTGAACGGTTTTAGG 58.457 43.478 0.00 0.00 0.00 2.69
2293 2354 4.215965 CGGTTTGATGTGAACGGTTTTAG 58.784 43.478 0.00 0.00 0.00 1.85
2294 2355 3.003482 CCGGTTTGATGTGAACGGTTTTA 59.997 43.478 0.00 0.00 0.00 1.52
2295 2356 2.223618 CCGGTTTGATGTGAACGGTTTT 60.224 45.455 0.00 0.00 0.00 2.43
2296 2357 1.335496 CCGGTTTGATGTGAACGGTTT 59.665 47.619 0.00 0.00 0.00 3.27
2297 2358 0.948678 CCGGTTTGATGTGAACGGTT 59.051 50.000 0.00 0.00 0.00 4.44
2298 2359 0.107081 TCCGGTTTGATGTGAACGGT 59.893 50.000 0.00 0.00 0.00 4.83
2299 2360 0.515564 GTCCGGTTTGATGTGAACGG 59.484 55.000 0.00 0.00 0.00 4.44
2300 2361 0.515564 GGTCCGGTTTGATGTGAACG 59.484 55.000 0.00 0.00 0.00 3.95
2301 2362 0.515564 CGGTCCGGTTTGATGTGAAC 59.484 55.000 2.34 0.00 0.00 3.18
2302 2363 0.107081 ACGGTCCGGTTTGATGTGAA 59.893 50.000 17.28 0.00 0.00 3.18
2303 2364 0.967662 TACGGTCCGGTTTGATGTGA 59.032 50.000 17.28 0.00 0.00 3.58
2304 2365 1.073177 GTACGGTCCGGTTTGATGTG 58.927 55.000 17.28 0.00 0.00 3.21
2305 2366 0.971386 AGTACGGTCCGGTTTGATGT 59.029 50.000 17.28 0.00 0.00 3.06
2306 2367 1.337447 ACAGTACGGTCCGGTTTGATG 60.337 52.381 17.28 7.80 0.00 3.07
2307 2368 0.971386 ACAGTACGGTCCGGTTTGAT 59.029 50.000 17.28 0.00 0.00 2.57
2308 2369 0.314935 GACAGTACGGTCCGGTTTGA 59.685 55.000 17.28 0.00 0.00 2.69
2309 2370 2.818350 GACAGTACGGTCCGGTTTG 58.182 57.895 17.28 12.34 0.00 2.93
2316 2377 1.505353 CGGTCTGGACAGTACGGTC 59.495 63.158 16.75 16.75 37.06 4.79
2317 2378 2.633509 GCGGTCTGGACAGTACGGT 61.634 63.158 15.67 0.00 32.50 4.83
2318 2379 2.181021 GCGGTCTGGACAGTACGG 59.819 66.667 15.67 10.58 32.50 4.02
2319 2380 1.154016 CAGCGGTCTGGACAGTACG 60.154 63.158 11.76 11.76 36.68 3.67
2320 2381 0.601558 TTCAGCGGTCTGGACAGTAC 59.398 55.000 3.10 0.00 40.69 2.73
2321 2382 0.888619 CTTCAGCGGTCTGGACAGTA 59.111 55.000 3.10 0.00 40.69 2.74
2322 2383 1.115930 ACTTCAGCGGTCTGGACAGT 61.116 55.000 3.10 0.00 40.69 3.55
2323 2384 0.389166 GACTTCAGCGGTCTGGACAG 60.389 60.000 3.10 0.00 40.69 3.51
2324 2385 1.112916 TGACTTCAGCGGTCTGGACA 61.113 55.000 3.10 0.00 40.69 4.02
2325 2386 0.247736 ATGACTTCAGCGGTCTGGAC 59.752 55.000 0.00 0.00 40.69 4.02
2326 2387 0.976641 AATGACTTCAGCGGTCTGGA 59.023 50.000 0.00 0.00 40.69 3.86
2327 2388 1.338105 TGAATGACTTCAGCGGTCTGG 60.338 52.381 0.00 0.00 40.69 3.86
2328 2389 2.084610 TGAATGACTTCAGCGGTCTG 57.915 50.000 0.00 0.00 36.46 3.51
2329 2390 2.224281 TGTTGAATGACTTCAGCGGTCT 60.224 45.455 0.00 0.00 43.34 3.85
2330 2391 2.143122 TGTTGAATGACTTCAGCGGTC 58.857 47.619 0.00 0.00 43.34 4.79
2331 2392 2.254546 TGTTGAATGACTTCAGCGGT 57.745 45.000 0.00 0.00 43.34 5.68
2332 2393 2.159476 CCATGTTGAATGACTTCAGCGG 60.159 50.000 0.00 0.00 43.34 5.52
2333 2394 2.159476 CCCATGTTGAATGACTTCAGCG 60.159 50.000 0.00 0.00 43.34 5.18
2334 2395 3.084039 TCCCATGTTGAATGACTTCAGC 58.916 45.455 0.00 0.00 42.19 4.26
2335 2396 4.155462 CAGTCCCATGTTGAATGACTTCAG 59.845 45.833 4.45 0.00 42.19 3.02
2336 2397 4.074259 CAGTCCCATGTTGAATGACTTCA 58.926 43.478 4.45 0.00 39.62 3.02
2337 2398 4.074970 ACAGTCCCATGTTGAATGACTTC 58.925 43.478 14.46 0.00 34.21 3.01
2338 2399 4.104383 ACAGTCCCATGTTGAATGACTT 57.896 40.909 14.46 0.00 34.21 3.01
2339 2400 3.795688 ACAGTCCCATGTTGAATGACT 57.204 42.857 14.46 3.97 36.77 3.41
2340 2401 5.185454 TGATACAGTCCCATGTTGAATGAC 58.815 41.667 14.46 7.68 34.56 3.06
2341 2402 5.434182 TGATACAGTCCCATGTTGAATGA 57.566 39.130 14.46 2.35 34.56 2.57
2342 2403 5.824097 TGATGATACAGTCCCATGTTGAATG 59.176 40.000 7.99 7.99 34.56 2.67
2343 2404 6.005066 TGATGATACAGTCCCATGTTGAAT 57.995 37.500 0.00 0.00 34.56 2.57
2344 2405 5.430886 CTGATGATACAGTCCCATGTTGAA 58.569 41.667 0.00 0.00 34.56 2.69
2345 2406 4.141642 CCTGATGATACAGTCCCATGTTGA 60.142 45.833 0.00 0.00 36.30 3.18
2346 2407 4.132336 CCTGATGATACAGTCCCATGTTG 58.868 47.826 0.00 0.00 36.30 3.33
2347 2408 3.434167 GCCTGATGATACAGTCCCATGTT 60.434 47.826 0.00 0.00 36.30 2.71
2348 2409 2.105477 GCCTGATGATACAGTCCCATGT 59.895 50.000 0.00 0.00 36.30 3.21
2349 2410 2.551721 GGCCTGATGATACAGTCCCATG 60.552 54.545 0.00 0.00 36.30 3.66
2350 2411 1.701847 GGCCTGATGATACAGTCCCAT 59.298 52.381 0.00 0.00 36.30 4.00
2351 2412 1.131638 GGCCTGATGATACAGTCCCA 58.868 55.000 0.00 0.00 36.30 4.37
2352 2413 0.398318 GGGCCTGATGATACAGTCCC 59.602 60.000 0.84 0.00 46.37 4.46
2353 2414 0.034059 CGGGCCTGATGATACAGTCC 59.966 60.000 5.28 0.00 35.50 3.85
2354 2415 0.034059 CCGGGCCTGATGATACAGTC 59.966 60.000 15.09 0.00 36.30 3.51
2355 2416 1.410850 CCCGGGCCTGATGATACAGT 61.411 60.000 15.09 0.00 36.30 3.55
2356 2417 1.372683 CCCGGGCCTGATGATACAG 59.627 63.158 15.09 0.00 37.61 2.74
2357 2418 2.818169 GCCCGGGCCTGATGATACA 61.818 63.158 36.64 0.00 34.56 2.29
2358 2419 2.032681 GCCCGGGCCTGATGATAC 59.967 66.667 36.64 2.25 34.56 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.