Multiple sequence alignment - TraesCS1B01G305300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G305300 chr1B 100.000 4750 0 0 1 4750 527881706 527876957 0.000000e+00 8772.0
1 TraesCS1B01G305300 chr1B 87.273 440 39 8 1535 1961 527880132 527879697 1.990000e-133 486.0
2 TraesCS1B01G305300 chr1B 87.330 442 35 11 1575 2010 527880172 527879746 1.990000e-133 486.0
3 TraesCS1B01G305300 chr1B 88.994 318 30 4 1 317 280691248 280691561 5.760000e-104 388.0
4 TraesCS1B01G305300 chr1B 86.901 313 18 11 1624 1921 527879999 527879695 3.540000e-86 329.0
5 TraesCS1B01G305300 chr1B 86.901 313 18 11 1708 2012 527880083 527879786 3.540000e-86 329.0
6 TraesCS1B01G305300 chr1B 89.062 64 7 0 3334 3397 527877514 527877451 3.940000e-11 80.5
7 TraesCS1B01G305300 chr1B 89.062 64 7 0 4193 4256 527878373 527878310 3.940000e-11 80.5
8 TraesCS1B01G305300 chr1D 93.956 2217 79 27 1585 3779 394183483 394185666 0.000000e+00 3301.0
9 TraesCS1B01G305300 chr1D 86.255 1586 103 46 415 1961 394182394 394183903 0.000000e+00 1615.0
10 TraesCS1B01G305300 chr1D 88.144 582 44 7 4184 4750 394249886 394250457 0.000000e+00 669.0
11 TraesCS1B01G305300 chr1D 85.602 382 37 10 1544 1921 394183538 394183905 7.460000e-103 385.0
12 TraesCS1B01G305300 chr1D 85.390 308 21 11 1708 2010 394183572 394183860 9.990000e-77 298.0
13 TraesCS1B01G305300 chr1D 87.259 259 19 9 1623 1875 394183655 394183905 2.800000e-72 283.0
14 TraesCS1B01G305300 chr1D 87.850 107 11 2 4085 4190 394248489 394248594 1.790000e-24 124.0
15 TraesCS1B01G305300 chr1D 83.168 101 7 1 3334 3424 394249895 394249995 3.050000e-12 84.2
16 TraesCS1B01G305300 chr3D 92.434 304 17 5 16 317 282725263 282724964 3.400000e-116 429.0
17 TraesCS1B01G305300 chr6B 91.837 294 22 2 25 317 496161885 496162177 4.420000e-110 409.0
18 TraesCS1B01G305300 chr6B 90.759 303 26 2 16 317 592751932 592751631 2.060000e-108 403.0
19 TraesCS1B01G305300 chr5A 90.645 310 26 3 9 317 310489651 310489344 4.420000e-110 409.0
20 TraesCS1B01G305300 chr6D 89.655 319 30 3 1 317 288955632 288955949 2.060000e-108 403.0
21 TraesCS1B01G305300 chr7B 90.728 302 22 5 12 309 84026575 84026276 9.580000e-107 398.0
22 TraesCS1B01G305300 chr7B 88.994 318 30 5 1 317 313678365 313678678 5.760000e-104 388.0
23 TraesCS1B01G305300 chr5D 88.235 323 31 7 1 320 304329346 304329664 3.470000e-101 379.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G305300 chr1B 527876957 527881706 4749 True 8772.0 8772 100.000000 1 4750 1 chr1B.!!$R1 4749
1 TraesCS1B01G305300 chr1B 527877451 527880172 2721 True 298.5 486 87.754833 1535 4256 6 chr1B.!!$R2 2721
2 TraesCS1B01G305300 chr1D 394182394 394185666 3272 False 1176.4 3301 87.692400 415 3779 5 chr1D.!!$F1 3364
3 TraesCS1B01G305300 chr1D 394248489 394250457 1968 False 292.4 669 86.387333 3334 4750 3 chr1D.!!$F2 1416

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
440 441 0.031616 GAGGAGGAGGAGGTCATGGT 60.032 60.0 0.0 0.0 0.0 3.55 F
475 476 0.252421 AGTGGAGGAGAGTGCATGGA 60.252 55.0 0.0 0.0 0.0 3.41 F
1108 1109 0.253207 TTTCTTCTCCCCCTCCCCTC 60.253 60.0 0.0 0.0 0.0 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1491 1522 0.179089 AGACTCACATCATCAGCCGC 60.179 55.000 0.0 0.0 0.00 6.53 R
1524 1555 1.002900 CGCTCTCGCTCCTAGAAAGAG 60.003 57.143 0.0 0.0 37.20 2.85 R
4262 5629 1.391485 GCAGCACGTTATCTCTGTGTG 59.609 52.381 0.0 0.0 36.04 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.986128 ACGAAAATACTTTCATGACGCG 58.014 40.909 3.53 3.53 40.96 6.01
22 23 3.430895 ACGAAAATACTTTCATGACGCGT 59.569 39.130 13.85 13.85 40.96 6.01
23 24 4.013397 CGAAAATACTTTCATGACGCGTC 58.987 43.478 31.66 31.66 40.96 5.19
24 25 4.433674 CGAAAATACTTTCATGACGCGTCA 60.434 41.667 40.57 40.57 40.96 4.35
37 38 1.858458 ACGCGTCATTTATCGTCATGG 59.142 47.619 5.58 0.00 0.00 3.66
38 39 2.124122 CGCGTCATTTATCGTCATGGA 58.876 47.619 0.00 0.00 0.00 3.41
39 40 2.538037 CGCGTCATTTATCGTCATGGAA 59.462 45.455 0.00 0.00 0.00 3.53
40 41 3.362014 CGCGTCATTTATCGTCATGGAAG 60.362 47.826 0.00 0.00 0.00 3.46
41 42 3.555956 GCGTCATTTATCGTCATGGAAGT 59.444 43.478 0.00 0.00 0.00 3.01
42 43 4.550831 GCGTCATTTATCGTCATGGAAGTG 60.551 45.833 0.00 0.00 0.00 3.16
43 44 4.025730 CGTCATTTATCGTCATGGAAGTGG 60.026 45.833 0.00 0.00 0.00 4.00
44 45 5.116180 GTCATTTATCGTCATGGAAGTGGA 58.884 41.667 0.00 0.00 0.00 4.02
45 46 5.006746 GTCATTTATCGTCATGGAAGTGGAC 59.993 44.000 0.00 0.00 0.00 4.02
46 47 4.545208 TTTATCGTCATGGAAGTGGACA 57.455 40.909 0.00 0.00 0.00 4.02
47 48 2.386661 ATCGTCATGGAAGTGGACAC 57.613 50.000 0.00 0.00 0.00 3.67
48 49 1.338107 TCGTCATGGAAGTGGACACT 58.662 50.000 0.00 0.00 44.94 3.55
57 58 3.914984 AGTGGACACTTCCGTGATG 57.085 52.632 0.00 0.00 46.37 3.07
58 59 1.338107 AGTGGACACTTCCGTGATGA 58.662 50.000 0.00 0.00 46.37 2.92
59 60 1.902508 AGTGGACACTTCCGTGATGAT 59.097 47.619 0.00 0.00 46.37 2.45
60 61 3.096852 AGTGGACACTTCCGTGATGATA 58.903 45.455 0.00 0.00 46.37 2.15
61 62 3.513912 AGTGGACACTTCCGTGATGATAA 59.486 43.478 0.00 0.00 46.37 1.75
62 63 4.162320 AGTGGACACTTCCGTGATGATAAT 59.838 41.667 0.00 0.00 46.37 1.28
63 64 4.271049 GTGGACACTTCCGTGATGATAATG 59.729 45.833 0.00 0.00 46.37 1.90
64 65 4.081142 TGGACACTTCCGTGATGATAATGT 60.081 41.667 0.00 0.00 46.37 2.71
65 66 4.876107 GGACACTTCCGTGATGATAATGTT 59.124 41.667 0.00 0.00 43.97 2.71
66 67 5.220662 GGACACTTCCGTGATGATAATGTTG 60.221 44.000 0.00 0.00 43.97 3.33
67 68 4.635765 ACACTTCCGTGATGATAATGTTGG 59.364 41.667 0.00 0.00 43.97 3.77
68 69 4.635765 CACTTCCGTGATGATAATGTTGGT 59.364 41.667 0.00 0.00 43.97 3.67
69 70 5.815222 CACTTCCGTGATGATAATGTTGGTA 59.185 40.000 0.00 0.00 43.97 3.25
70 71 6.315144 CACTTCCGTGATGATAATGTTGGTAA 59.685 38.462 0.00 0.00 43.97 2.85
71 72 7.012327 CACTTCCGTGATGATAATGTTGGTAAT 59.988 37.037 0.00 0.00 43.97 1.89
72 73 6.859420 TCCGTGATGATAATGTTGGTAATG 57.141 37.500 0.00 0.00 0.00 1.90
73 74 6.353323 TCCGTGATGATAATGTTGGTAATGT 58.647 36.000 0.00 0.00 0.00 2.71
74 75 6.481976 TCCGTGATGATAATGTTGGTAATGTC 59.518 38.462 0.00 0.00 0.00 3.06
75 76 6.259829 CCGTGATGATAATGTTGGTAATGTCA 59.740 38.462 0.00 0.00 0.00 3.58
76 77 7.041167 CCGTGATGATAATGTTGGTAATGTCAT 60.041 37.037 0.00 0.00 0.00 3.06
77 78 7.799914 CGTGATGATAATGTTGGTAATGTCATG 59.200 37.037 0.00 0.00 0.00 3.07
78 79 8.077991 GTGATGATAATGTTGGTAATGTCATGG 58.922 37.037 0.00 0.00 0.00 3.66
79 80 7.997803 TGATGATAATGTTGGTAATGTCATGGA 59.002 33.333 0.00 0.00 0.00 3.41
80 81 8.765488 ATGATAATGTTGGTAATGTCATGGAA 57.235 30.769 0.00 0.00 0.00 3.53
81 82 7.995289 TGATAATGTTGGTAATGTCATGGAAC 58.005 34.615 0.00 0.00 0.00 3.62
98 99 4.946445 TGGAACACTTATACGACAACACA 58.054 39.130 0.00 0.00 0.00 3.72
99 100 4.986034 TGGAACACTTATACGACAACACAG 59.014 41.667 0.00 0.00 0.00 3.66
100 101 4.387862 GGAACACTTATACGACAACACAGG 59.612 45.833 0.00 0.00 0.00 4.00
101 102 4.595762 ACACTTATACGACAACACAGGT 57.404 40.909 0.00 0.00 0.00 4.00
102 103 5.710513 ACACTTATACGACAACACAGGTA 57.289 39.130 0.00 0.00 0.00 3.08
103 104 6.276832 ACACTTATACGACAACACAGGTAT 57.723 37.500 0.00 0.00 0.00 2.73
104 105 6.097356 ACACTTATACGACAACACAGGTATG 58.903 40.000 0.00 0.00 0.00 2.39
105 106 6.071784 ACACTTATACGACAACACAGGTATGA 60.072 38.462 0.00 0.00 0.00 2.15
106 107 6.252869 CACTTATACGACAACACAGGTATGAC 59.747 42.308 0.00 0.00 0.00 3.06
107 108 6.152323 ACTTATACGACAACACAGGTATGACT 59.848 38.462 0.00 0.00 0.00 3.41
108 109 7.337689 ACTTATACGACAACACAGGTATGACTA 59.662 37.037 0.00 0.00 0.00 2.59
109 110 6.710597 ATACGACAACACAGGTATGACTAT 57.289 37.500 0.00 0.00 0.00 2.12
110 111 4.995124 ACGACAACACAGGTATGACTATC 58.005 43.478 0.00 0.00 0.00 2.08
111 112 4.705507 ACGACAACACAGGTATGACTATCT 59.294 41.667 0.00 0.00 0.00 1.98
112 113 5.185249 ACGACAACACAGGTATGACTATCTT 59.815 40.000 0.00 0.00 0.00 2.40
113 114 5.516696 CGACAACACAGGTATGACTATCTTG 59.483 44.000 0.00 0.00 0.00 3.02
114 115 6.605471 ACAACACAGGTATGACTATCTTGA 57.395 37.500 0.00 0.00 0.00 3.02
115 116 7.187824 ACAACACAGGTATGACTATCTTGAT 57.812 36.000 0.00 0.00 0.00 2.57
116 117 7.624549 ACAACACAGGTATGACTATCTTGATT 58.375 34.615 0.00 0.00 0.00 2.57
117 118 7.766278 ACAACACAGGTATGACTATCTTGATTC 59.234 37.037 0.00 0.00 0.00 2.52
118 119 7.667575 ACACAGGTATGACTATCTTGATTCT 57.332 36.000 0.00 0.00 0.00 2.40
119 120 7.495901 ACACAGGTATGACTATCTTGATTCTG 58.504 38.462 0.00 0.00 0.00 3.02
120 121 7.124901 ACACAGGTATGACTATCTTGATTCTGT 59.875 37.037 0.00 0.00 0.00 3.41
121 122 7.651304 CACAGGTATGACTATCTTGATTCTGTC 59.349 40.741 0.00 0.00 0.00 3.51
122 123 7.343057 ACAGGTATGACTATCTTGATTCTGTCA 59.657 37.037 12.36 12.36 38.52 3.58
123 124 8.366401 CAGGTATGACTATCTTGATTCTGTCAT 58.634 37.037 19.47 19.47 44.19 3.06
124 125 9.593565 AGGTATGACTATCTTGATTCTGTCATA 57.406 33.333 18.29 18.29 42.64 2.15
131 132 9.823647 ACTATCTTGATTCTGTCATAAAATCGT 57.176 29.630 0.00 0.00 36.54 3.73
133 134 8.722480 ATCTTGATTCTGTCATAAAATCGTCA 57.278 30.769 0.00 0.00 36.54 4.35
134 135 8.722480 TCTTGATTCTGTCATAAAATCGTCAT 57.278 30.769 0.00 0.00 36.54 3.06
135 136 8.606602 TCTTGATTCTGTCATAAAATCGTCATG 58.393 33.333 0.00 0.00 36.54 3.07
136 137 7.250445 TGATTCTGTCATAAAATCGTCATGG 57.750 36.000 0.00 0.00 33.13 3.66
137 138 7.047271 TGATTCTGTCATAAAATCGTCATGGA 58.953 34.615 0.00 0.00 33.13 3.41
138 139 6.662414 TTCTGTCATAAAATCGTCATGGAC 57.338 37.500 0.00 0.00 0.00 4.02
139 140 5.729510 TCTGTCATAAAATCGTCATGGACA 58.270 37.500 0.00 0.00 32.09 4.02
140 141 6.348498 TCTGTCATAAAATCGTCATGGACAT 58.652 36.000 0.00 0.00 32.09 3.06
141 142 7.496747 TCTGTCATAAAATCGTCATGGACATA 58.503 34.615 0.00 0.00 32.09 2.29
142 143 7.438160 TCTGTCATAAAATCGTCATGGACATAC 59.562 37.037 0.00 0.00 32.09 2.39
143 144 7.044798 TGTCATAAAATCGTCATGGACATACA 58.955 34.615 0.00 0.00 32.09 2.29
144 145 7.714813 TGTCATAAAATCGTCATGGACATACAT 59.285 33.333 0.00 0.00 32.09 2.29
146 147 4.818534 AAATCGTCATGGACATACATGC 57.181 40.909 0.00 0.00 46.02 4.06
147 148 2.977772 TCGTCATGGACATACATGCA 57.022 45.000 0.00 0.00 46.02 3.96
148 149 3.473923 TCGTCATGGACATACATGCAT 57.526 42.857 0.00 0.00 46.02 3.96
149 150 3.132925 TCGTCATGGACATACATGCATG 58.867 45.455 25.09 25.09 46.02 4.06
150 151 3.132925 CGTCATGGACATACATGCATGA 58.867 45.455 32.75 16.49 46.02 3.07
151 152 3.059393 CGTCATGGACATACATGCATGAC 60.059 47.826 32.75 22.89 46.02 3.06
152 153 3.878699 GTCATGGACATACATGCATGACA 59.121 43.478 32.75 19.41 46.23 3.58
153 154 4.024302 GTCATGGACATACATGCATGACAG 60.024 45.833 32.75 21.31 46.23 3.51
154 155 3.910568 TGGACATACATGCATGACAGA 57.089 42.857 32.75 14.67 0.00 3.41
155 156 4.219264 TGGACATACATGCATGACAGAA 57.781 40.909 32.75 12.42 0.00 3.02
156 157 4.587891 TGGACATACATGCATGACAGAAA 58.412 39.130 32.75 10.73 0.00 2.52
157 158 5.008980 TGGACATACATGCATGACAGAAAA 58.991 37.500 32.75 10.50 0.00 2.29
158 159 5.106197 TGGACATACATGCATGACAGAAAAC 60.106 40.000 32.75 14.94 0.00 2.43
159 160 5.124457 GGACATACATGCATGACAGAAAACT 59.876 40.000 32.75 9.69 0.00 2.66
160 161 6.349611 GGACATACATGCATGACAGAAAACTT 60.350 38.462 32.75 8.94 0.00 2.66
161 162 6.384224 ACATACATGCATGACAGAAAACTTG 58.616 36.000 32.75 14.20 0.00 3.16
162 163 6.207221 ACATACATGCATGACAGAAAACTTGA 59.793 34.615 32.75 2.33 0.00 3.02
163 164 4.863491 ACATGCATGACAGAAAACTTGAC 58.137 39.130 32.75 0.00 0.00 3.18
164 165 3.988379 TGCATGACAGAAAACTTGACC 57.012 42.857 0.00 0.00 0.00 4.02
165 166 3.554934 TGCATGACAGAAAACTTGACCT 58.445 40.909 0.00 0.00 0.00 3.85
166 167 4.713553 TGCATGACAGAAAACTTGACCTA 58.286 39.130 0.00 0.00 0.00 3.08
167 168 4.515191 TGCATGACAGAAAACTTGACCTAC 59.485 41.667 0.00 0.00 0.00 3.18
168 169 4.083271 GCATGACAGAAAACTTGACCTACC 60.083 45.833 0.00 0.00 0.00 3.18
169 170 3.724374 TGACAGAAAACTTGACCTACCG 58.276 45.455 0.00 0.00 0.00 4.02
170 171 3.133362 TGACAGAAAACTTGACCTACCGT 59.867 43.478 0.00 0.00 0.00 4.83
171 172 3.463944 ACAGAAAACTTGACCTACCGTG 58.536 45.455 0.00 0.00 0.00 4.94
172 173 2.806244 CAGAAAACTTGACCTACCGTGG 59.194 50.000 0.00 0.00 0.00 4.94
173 174 1.534163 GAAAACTTGACCTACCGTGGC 59.466 52.381 0.00 0.00 0.00 5.01
174 175 0.470766 AAACTTGACCTACCGTGGCA 59.529 50.000 0.00 0.00 0.00 4.92
175 176 0.470766 AACTTGACCTACCGTGGCAA 59.529 50.000 0.00 0.00 0.00 4.52
176 177 0.470766 ACTTGACCTACCGTGGCAAA 59.529 50.000 0.00 0.00 0.00 3.68
177 178 0.872388 CTTGACCTACCGTGGCAAAC 59.128 55.000 0.00 0.00 0.00 2.93
178 179 0.180642 TTGACCTACCGTGGCAAACA 59.819 50.000 0.00 0.00 0.00 2.83
179 180 0.533308 TGACCTACCGTGGCAAACAC 60.533 55.000 0.00 0.00 46.78 3.32
189 190 3.117434 GTGGCAAACACGTATCATCAC 57.883 47.619 0.00 0.00 40.85 3.06
191 192 1.062002 GGCAAACACGTATCATCACGG 59.938 52.381 0.00 0.00 46.12 4.94
192 193 1.996898 GCAAACACGTATCATCACGGA 59.003 47.619 0.00 0.00 46.12 4.69
193 194 2.413796 GCAAACACGTATCATCACGGAA 59.586 45.455 0.00 0.00 46.12 4.30
194 195 3.483574 GCAAACACGTATCATCACGGAAG 60.484 47.826 0.00 0.00 46.12 3.46
226 227 3.072211 GGTAGTGTACCTTGCTGAAACC 58.928 50.000 0.00 0.00 45.52 3.27
227 228 3.495453 GGTAGTGTACCTTGCTGAAACCA 60.495 47.826 0.00 0.00 45.52 3.67
228 229 2.572290 AGTGTACCTTGCTGAAACCAC 58.428 47.619 0.00 0.00 0.00 4.16
229 230 2.172717 AGTGTACCTTGCTGAAACCACT 59.827 45.455 0.00 0.00 0.00 4.00
230 231 2.949644 GTGTACCTTGCTGAAACCACTT 59.050 45.455 0.00 0.00 0.00 3.16
231 232 2.948979 TGTACCTTGCTGAAACCACTTG 59.051 45.455 0.00 0.00 0.00 3.16
232 233 2.143876 ACCTTGCTGAAACCACTTGT 57.856 45.000 0.00 0.00 0.00 3.16
233 234 2.024414 ACCTTGCTGAAACCACTTGTC 58.976 47.619 0.00 0.00 0.00 3.18
234 235 2.023673 CCTTGCTGAAACCACTTGTCA 58.976 47.619 0.00 0.00 0.00 3.58
235 236 2.624838 CCTTGCTGAAACCACTTGTCAT 59.375 45.455 0.00 0.00 0.00 3.06
236 237 3.068590 CCTTGCTGAAACCACTTGTCATT 59.931 43.478 0.00 0.00 0.00 2.57
237 238 4.441913 CCTTGCTGAAACCACTTGTCATTT 60.442 41.667 0.00 0.00 0.00 2.32
238 239 4.734398 TGCTGAAACCACTTGTCATTTT 57.266 36.364 0.00 0.00 0.00 1.82
239 240 4.681744 TGCTGAAACCACTTGTCATTTTC 58.318 39.130 0.00 0.00 0.00 2.29
240 241 4.402155 TGCTGAAACCACTTGTCATTTTCT 59.598 37.500 0.00 0.00 0.00 2.52
241 242 5.105392 TGCTGAAACCACTTGTCATTTTCTT 60.105 36.000 0.00 0.00 0.00 2.52
242 243 5.460091 GCTGAAACCACTTGTCATTTTCTTC 59.540 40.000 0.00 0.00 0.00 2.87
243 244 6.681368 GCTGAAACCACTTGTCATTTTCTTCT 60.681 38.462 0.00 0.00 0.00 2.85
244 245 6.563422 TGAAACCACTTGTCATTTTCTTCTG 58.437 36.000 0.00 0.00 0.00 3.02
245 246 4.574599 ACCACTTGTCATTTTCTTCTGC 57.425 40.909 0.00 0.00 0.00 4.26
246 247 4.210331 ACCACTTGTCATTTTCTTCTGCT 58.790 39.130 0.00 0.00 0.00 4.24
247 248 4.276926 ACCACTTGTCATTTTCTTCTGCTC 59.723 41.667 0.00 0.00 0.00 4.26
248 249 4.320788 CCACTTGTCATTTTCTTCTGCTCC 60.321 45.833 0.00 0.00 0.00 4.70
249 250 4.518211 CACTTGTCATTTTCTTCTGCTCCT 59.482 41.667 0.00 0.00 0.00 3.69
250 251 4.759183 ACTTGTCATTTTCTTCTGCTCCTC 59.241 41.667 0.00 0.00 0.00 3.71
251 252 3.329386 TGTCATTTTCTTCTGCTCCTCG 58.671 45.455 0.00 0.00 0.00 4.63
252 253 3.244215 TGTCATTTTCTTCTGCTCCTCGT 60.244 43.478 0.00 0.00 0.00 4.18
253 254 3.748568 GTCATTTTCTTCTGCTCCTCGTT 59.251 43.478 0.00 0.00 0.00 3.85
254 255 3.748048 TCATTTTCTTCTGCTCCTCGTTG 59.252 43.478 0.00 0.00 0.00 4.10
255 256 2.169832 TTTCTTCTGCTCCTCGTTGG 57.830 50.000 0.00 0.00 37.10 3.77
256 257 0.321671 TTCTTCTGCTCCTCGTTGGG 59.678 55.000 0.00 0.00 36.20 4.12
257 258 0.832135 TCTTCTGCTCCTCGTTGGGT 60.832 55.000 0.00 0.00 36.20 4.51
258 259 0.035458 CTTCTGCTCCTCGTTGGGTT 59.965 55.000 0.00 0.00 36.20 4.11
259 260 0.034896 TTCTGCTCCTCGTTGGGTTC 59.965 55.000 0.00 0.00 36.20 3.62
260 261 1.738099 CTGCTCCTCGTTGGGTTCG 60.738 63.158 0.00 0.00 36.20 3.95
261 262 2.154798 CTGCTCCTCGTTGGGTTCGA 62.155 60.000 0.00 0.00 36.20 3.71
262 263 1.737008 GCTCCTCGTTGGGTTCGAC 60.737 63.158 0.00 0.00 36.20 4.20
263 264 1.663739 CTCCTCGTTGGGTTCGACA 59.336 57.895 0.00 0.00 36.20 4.35
264 265 0.666577 CTCCTCGTTGGGTTCGACAC 60.667 60.000 0.00 0.00 36.20 3.67
265 266 1.111116 TCCTCGTTGGGTTCGACACT 61.111 55.000 0.00 0.00 36.20 3.55
266 267 0.666577 CCTCGTTGGGTTCGACACTC 60.667 60.000 0.00 0.00 33.71 3.51
267 268 0.314302 CTCGTTGGGTTCGACACTCT 59.686 55.000 0.00 0.00 33.71 3.24
268 269 0.748450 TCGTTGGGTTCGACACTCTT 59.252 50.000 0.00 0.00 32.30 2.85
269 270 1.955778 TCGTTGGGTTCGACACTCTTA 59.044 47.619 0.00 0.00 32.30 2.10
270 271 2.056577 CGTTGGGTTCGACACTCTTAC 58.943 52.381 0.00 0.00 0.00 2.34
271 272 2.288030 CGTTGGGTTCGACACTCTTACT 60.288 50.000 0.00 0.00 0.00 2.24
272 273 3.725490 GTTGGGTTCGACACTCTTACTT 58.275 45.455 0.00 0.00 0.00 2.24
273 274 4.557296 CGTTGGGTTCGACACTCTTACTTA 60.557 45.833 0.00 0.00 0.00 2.24
274 275 5.476614 GTTGGGTTCGACACTCTTACTTAT 58.523 41.667 0.00 0.00 0.00 1.73
275 276 5.320549 TGGGTTCGACACTCTTACTTATC 57.679 43.478 0.00 0.00 0.00 1.75
276 277 4.142534 TGGGTTCGACACTCTTACTTATCG 60.143 45.833 0.00 0.00 0.00 2.92
277 278 4.095483 GGGTTCGACACTCTTACTTATCGA 59.905 45.833 0.00 0.00 36.85 3.59
278 279 5.392380 GGGTTCGACACTCTTACTTATCGAA 60.392 44.000 2.99 2.99 43.90 3.71
279 280 6.088824 GGTTCGACACTCTTACTTATCGAAA 58.911 40.000 8.30 0.00 46.48 3.46
280 281 6.583806 GGTTCGACACTCTTACTTATCGAAAA 59.416 38.462 8.30 0.00 46.48 2.29
281 282 7.201333 GGTTCGACACTCTTACTTATCGAAAAG 60.201 40.741 8.30 0.00 46.48 2.27
282 283 7.137490 TCGACACTCTTACTTATCGAAAAGA 57.863 36.000 0.00 0.00 35.80 2.52
283 284 7.242079 TCGACACTCTTACTTATCGAAAAGAG 58.758 38.462 16.62 16.62 46.69 2.85
296 297 9.922305 CTTATCGAAAAGAGTTACAATTGATCC 57.078 33.333 13.59 0.00 0.00 3.36
297 298 6.737254 TCGAAAAGAGTTACAATTGATCCC 57.263 37.500 13.59 0.00 0.00 3.85
298 299 5.646360 TCGAAAAGAGTTACAATTGATCCCC 59.354 40.000 13.59 0.00 0.00 4.81
299 300 5.648092 CGAAAAGAGTTACAATTGATCCCCT 59.352 40.000 13.59 0.72 0.00 4.79
300 301 6.821665 CGAAAAGAGTTACAATTGATCCCCTA 59.178 38.462 13.59 0.00 0.00 3.53
301 302 7.499232 CGAAAAGAGTTACAATTGATCCCCTAT 59.501 37.037 13.59 0.00 0.00 2.57
302 303 9.847224 GAAAAGAGTTACAATTGATCCCCTATA 57.153 33.333 13.59 0.00 0.00 1.31
303 304 9.628500 AAAAGAGTTACAATTGATCCCCTATAC 57.372 33.333 13.59 0.00 0.00 1.47
304 305 8.568617 AAGAGTTACAATTGATCCCCTATACT 57.431 34.615 13.59 1.84 0.00 2.12
305 306 8.568617 AGAGTTACAATTGATCCCCTATACTT 57.431 34.615 13.59 0.00 0.00 2.24
306 307 8.432805 AGAGTTACAATTGATCCCCTATACTTG 58.567 37.037 13.59 0.00 0.00 3.16
307 308 8.102484 AGTTACAATTGATCCCCTATACTTGT 57.898 34.615 13.59 0.00 0.00 3.16
308 309 7.993183 AGTTACAATTGATCCCCTATACTTGTG 59.007 37.037 13.59 0.00 0.00 3.33
309 310 5.694995 ACAATTGATCCCCTATACTTGTGG 58.305 41.667 13.59 0.00 0.00 4.17
310 311 5.072741 CAATTGATCCCCTATACTTGTGGG 58.927 45.833 0.00 0.00 40.59 4.61
311 312 3.431411 TGATCCCCTATACTTGTGGGT 57.569 47.619 0.00 0.00 39.31 4.51
312 313 3.314693 TGATCCCCTATACTTGTGGGTC 58.685 50.000 0.00 0.00 39.31 4.46
313 314 2.953093 TCCCCTATACTTGTGGGTCA 57.047 50.000 0.00 0.00 39.31 4.02
314 315 3.431411 TCCCCTATACTTGTGGGTCAT 57.569 47.619 0.00 0.00 39.31 3.06
315 316 3.314693 TCCCCTATACTTGTGGGTCATC 58.685 50.000 0.00 0.00 39.31 2.92
316 317 3.045634 CCCCTATACTTGTGGGTCATCA 58.954 50.000 0.00 0.00 39.31 3.07
317 318 3.181454 CCCCTATACTTGTGGGTCATCAC 60.181 52.174 0.00 0.00 39.31 3.06
318 319 3.454447 CCCTATACTTGTGGGTCATCACA 59.546 47.826 0.00 0.00 44.81 3.58
319 320 4.442706 CCTATACTTGTGGGTCATCACAC 58.557 47.826 0.00 0.00 45.95 3.82
324 325 3.955145 GTGGGTCATCACACATCCA 57.045 52.632 0.00 0.00 46.25 3.41
325 326 2.425143 GTGGGTCATCACACATCCAT 57.575 50.000 0.00 0.00 46.25 3.41
326 327 2.019249 GTGGGTCATCACACATCCATG 58.981 52.381 0.00 0.00 46.25 3.66
327 328 1.064537 TGGGTCATCACACATCCATGG 60.065 52.381 4.97 4.97 27.56 3.66
328 329 1.027357 GGTCATCACACATCCATGGC 58.973 55.000 6.96 0.00 0.00 4.40
329 330 0.659427 GTCATCACACATCCATGGCG 59.341 55.000 6.96 2.78 0.00 5.69
330 331 0.464193 TCATCACACATCCATGGCGG 60.464 55.000 6.96 3.66 0.00 6.13
331 332 1.825191 ATCACACATCCATGGCGGC 60.825 57.895 6.96 0.00 33.14 6.53
332 333 3.879682 CACACATCCATGGCGGCG 61.880 66.667 6.96 0.51 33.14 6.46
334 335 4.854924 CACATCCATGGCGGCGGA 62.855 66.667 9.78 8.03 35.27 5.54
335 336 4.552365 ACATCCATGGCGGCGGAG 62.552 66.667 9.78 6.36 33.97 4.63
344 345 4.214327 GCGGCGGAGGAGGAAGAG 62.214 72.222 9.78 0.00 0.00 2.85
345 346 3.532155 CGGCGGAGGAGGAAGAGG 61.532 72.222 0.00 0.00 0.00 3.69
346 347 2.364448 GGCGGAGGAGGAAGAGGT 60.364 66.667 0.00 0.00 0.00 3.85
347 348 2.428085 GGCGGAGGAGGAAGAGGTC 61.428 68.421 0.00 0.00 0.00 3.85
348 349 1.682684 GCGGAGGAGGAAGAGGTCA 60.683 63.158 0.00 0.00 0.00 4.02
349 350 1.045911 GCGGAGGAGGAAGAGGTCAT 61.046 60.000 0.00 0.00 0.00 3.06
350 351 0.749649 CGGAGGAGGAAGAGGTCATG 59.250 60.000 0.00 0.00 0.00 3.07
351 352 1.127343 GGAGGAGGAAGAGGTCATGG 58.873 60.000 0.00 0.00 0.00 3.66
352 353 0.467804 GAGGAGGAAGAGGTCATGGC 59.532 60.000 0.00 0.00 0.00 4.40
353 354 1.144936 GGAGGAAGAGGTCATGGCG 59.855 63.158 0.00 0.00 0.00 5.69
354 355 1.330655 GGAGGAAGAGGTCATGGCGA 61.331 60.000 0.00 0.00 0.00 5.54
355 356 0.179097 GAGGAAGAGGTCATGGCGAC 60.179 60.000 0.00 0.00 44.57 5.19
370 371 3.540211 CGACAAGCATCAGGGAAGT 57.460 52.632 0.00 0.00 0.00 3.01
371 372 1.081892 CGACAAGCATCAGGGAAGTG 58.918 55.000 0.00 0.00 0.00 3.16
372 373 1.457346 GACAAGCATCAGGGAAGTGG 58.543 55.000 0.00 0.00 0.00 4.00
373 374 1.003580 GACAAGCATCAGGGAAGTGGA 59.996 52.381 0.00 0.00 0.00 4.02
374 375 1.004044 ACAAGCATCAGGGAAGTGGAG 59.996 52.381 0.00 0.00 0.00 3.86
375 376 1.004044 CAAGCATCAGGGAAGTGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
376 377 2.237143 CAAGCATCAGGGAAGTGGAGTA 59.763 50.000 0.00 0.00 0.00 2.59
377 378 2.114616 AGCATCAGGGAAGTGGAGTAG 58.885 52.381 0.00 0.00 0.00 2.57
378 379 2.111384 GCATCAGGGAAGTGGAGTAGA 58.889 52.381 0.00 0.00 0.00 2.59
379 380 2.102252 GCATCAGGGAAGTGGAGTAGAG 59.898 54.545 0.00 0.00 0.00 2.43
380 381 3.370104 CATCAGGGAAGTGGAGTAGAGT 58.630 50.000 0.00 0.00 0.00 3.24
381 382 2.808919 TCAGGGAAGTGGAGTAGAGTG 58.191 52.381 0.00 0.00 0.00 3.51
382 383 2.110188 TCAGGGAAGTGGAGTAGAGTGT 59.890 50.000 0.00 0.00 0.00 3.55
383 384 3.332783 TCAGGGAAGTGGAGTAGAGTGTA 59.667 47.826 0.00 0.00 0.00 2.90
384 385 3.444388 CAGGGAAGTGGAGTAGAGTGTAC 59.556 52.174 0.00 0.00 0.00 2.90
385 386 2.422832 GGGAAGTGGAGTAGAGTGTACG 59.577 54.545 0.00 0.00 0.00 3.67
386 387 2.422832 GGAAGTGGAGTAGAGTGTACGG 59.577 54.545 0.00 0.00 0.00 4.02
387 388 1.461559 AGTGGAGTAGAGTGTACGGC 58.538 55.000 0.00 0.00 0.00 5.68
388 389 0.455005 GTGGAGTAGAGTGTACGGCC 59.545 60.000 0.00 0.00 0.00 6.13
389 390 0.038599 TGGAGTAGAGTGTACGGCCA 59.961 55.000 2.24 9.88 0.00 5.36
390 391 1.341679 TGGAGTAGAGTGTACGGCCAT 60.342 52.381 2.24 0.00 0.00 4.40
391 392 1.067212 GGAGTAGAGTGTACGGCCATG 59.933 57.143 2.24 0.00 0.00 3.66
392 393 1.067212 GAGTAGAGTGTACGGCCATGG 59.933 57.143 7.63 7.63 0.00 3.66
393 394 0.529992 GTAGAGTGTACGGCCATGGC 60.530 60.000 29.47 29.47 41.06 4.40
413 414 3.755628 CGAGCGTCGAGGGGGAAA 61.756 66.667 7.31 0.00 43.74 3.13
421 422 2.066999 CGAGGGGGAAAGGAGGAGG 61.067 68.421 0.00 0.00 0.00 4.30
434 435 1.230819 AGGAGGAGGAGGAGGAGGT 60.231 63.158 0.00 0.00 0.00 3.85
439 440 0.762461 GGAGGAGGAGGAGGTCATGG 60.762 65.000 0.00 0.00 0.00 3.66
440 441 0.031616 GAGGAGGAGGAGGTCATGGT 60.032 60.000 0.00 0.00 0.00 3.55
443 444 0.827368 GAGGAGGAGGTCATGGTGAC 59.173 60.000 1.54 1.54 46.23 3.67
451 452 3.748863 GTCATGGTGACGAGCATCT 57.251 52.632 0.00 0.00 38.27 2.90
472 473 0.908198 GGAAGTGGAGGAGAGTGCAT 59.092 55.000 0.00 0.00 0.00 3.96
474 475 0.617413 AAGTGGAGGAGAGTGCATGG 59.383 55.000 0.00 0.00 0.00 3.66
475 476 0.252421 AGTGGAGGAGAGTGCATGGA 60.252 55.000 0.00 0.00 0.00 3.41
481 482 1.099879 GGAGAGTGCATGGACATGGC 61.100 60.000 20.21 5.84 39.16 4.40
503 504 0.798771 CGAGCGTCGAGGAAGAAAGG 60.799 60.000 9.75 0.00 43.74 3.11
506 507 0.458716 GCGTCGAGGAAGAAAGGAGG 60.459 60.000 9.75 0.00 0.00 4.30
507 508 1.174783 CGTCGAGGAAGAAAGGAGGA 58.825 55.000 0.00 0.00 0.00 3.71
508 509 1.133407 CGTCGAGGAAGAAAGGAGGAG 59.867 57.143 0.00 0.00 0.00 3.69
509 510 2.172679 GTCGAGGAAGAAAGGAGGAGT 58.827 52.381 0.00 0.00 0.00 3.85
510 511 2.094442 GTCGAGGAAGAAAGGAGGAGTG 60.094 54.545 0.00 0.00 0.00 3.51
511 512 1.404851 CGAGGAAGAAAGGAGGAGTGC 60.405 57.143 0.00 0.00 0.00 4.40
512 513 0.610687 AGGAAGAAAGGAGGAGTGCG 59.389 55.000 0.00 0.00 0.00 5.34
548 549 3.153130 CATCGAGGAGAGAGGATTAGCA 58.847 50.000 0.00 0.00 0.00 3.49
553 554 3.573967 GAGGAGAGAGGATTAGCAAGAGG 59.426 52.174 0.00 0.00 0.00 3.69
555 556 3.964031 GGAGAGAGGATTAGCAAGAGGAA 59.036 47.826 0.00 0.00 0.00 3.36
566 567 7.655732 GGATTAGCAAGAGGAAGAAGAAGATAC 59.344 40.741 0.00 0.00 0.00 2.24
571 572 4.211920 AGAGGAAGAAGAAGATACGAGGG 58.788 47.826 0.00 0.00 0.00 4.30
594 595 3.570212 GGGATATGCGTGGGCCCT 61.570 66.667 25.70 4.09 38.85 5.19
648 649 3.591835 GTGGCGTTGGTGGGTGTG 61.592 66.667 0.00 0.00 0.00 3.82
649 650 4.885270 TGGCGTTGGTGGGTGTGG 62.885 66.667 0.00 0.00 0.00 4.17
652 653 2.970324 CGTTGGTGGGTGTGGTCG 60.970 66.667 0.00 0.00 0.00 4.79
655 656 2.368011 TTGGTGGGTGTGGTCGACA 61.368 57.895 18.91 0.27 0.00 4.35
672 673 2.728383 ACGACCGACGCGAAGTTG 60.728 61.111 15.93 13.13 46.94 3.16
677 678 3.455685 CGACGCGAAGTTGGTACC 58.544 61.111 15.93 4.43 0.00 3.34
728 729 1.762708 AATACATGGACTTTGGCGGG 58.237 50.000 0.00 0.00 0.00 6.13
729 730 0.623723 ATACATGGACTTTGGCGGGT 59.376 50.000 0.00 0.00 0.00 5.28
805 806 0.613777 ATCTTTCTCCCGTGTGTCCC 59.386 55.000 0.00 0.00 0.00 4.46
816 817 1.337823 CGTGTGTCCCGAGGAAAAGAT 60.338 52.381 0.00 0.00 31.38 2.40
818 819 1.697432 TGTGTCCCGAGGAAAAGATGT 59.303 47.619 0.00 0.00 31.38 3.06
822 823 0.462047 CCCGAGGAAAAGATGTCCGG 60.462 60.000 0.00 0.00 40.36 5.14
871 872 2.267006 CAGAGGCCGCTGATGTGT 59.733 61.111 30.69 0.00 38.14 3.72
873 874 1.376424 AGAGGCCGCTGATGTGTTG 60.376 57.895 8.76 0.00 0.00 3.33
877 878 3.027170 GCCGCTGATGTGTTGGTCG 62.027 63.158 0.00 0.00 0.00 4.79
882 883 1.900585 CTGATGTGTTGGTCGCGTGG 61.901 60.000 5.77 0.00 0.00 4.94
925 926 3.554692 CTCGGGCGCGTGTGATTC 61.555 66.667 23.19 0.00 0.00 2.52
1016 1017 4.585526 GATGCCGCATCCCGTCGA 62.586 66.667 20.86 0.00 35.07 4.20
1017 1018 3.865929 GATGCCGCATCCCGTCGAT 62.866 63.158 20.86 0.00 35.07 3.59
1023 1024 3.723172 CATCCCGTCGATGCCTTG 58.277 61.111 0.00 0.00 41.99 3.61
1024 1025 1.889105 CATCCCGTCGATGCCTTGG 60.889 63.158 0.00 0.00 41.99 3.61
1057 1058 1.466167 CGTCCAGGCAAGATTCTGTTG 59.534 52.381 0.00 0.00 0.00 3.33
1097 1098 4.737765 CGAGTCTCCGATTCATTTCTTCTC 59.262 45.833 0.00 0.00 0.00 2.87
1104 1105 3.745797 CGATTCATTTCTTCTCCCCCTCC 60.746 52.174 0.00 0.00 0.00 4.30
1105 1106 1.596496 TCATTTCTTCTCCCCCTCCC 58.404 55.000 0.00 0.00 0.00 4.30
1106 1107 0.553333 CATTTCTTCTCCCCCTCCCC 59.447 60.000 0.00 0.00 0.00 4.81
1107 1108 0.427685 ATTTCTTCTCCCCCTCCCCT 59.572 55.000 0.00 0.00 0.00 4.79
1108 1109 0.253207 TTTCTTCTCCCCCTCCCCTC 60.253 60.000 0.00 0.00 0.00 4.30
1120 1121 2.092158 CCCTCCCCTCTTGATTTTCCTC 60.092 54.545 0.00 0.00 0.00 3.71
1127 1128 4.221482 CCCTCTTGATTTTCCTCTTTTGGG 59.779 45.833 0.00 0.00 0.00 4.12
1128 1129 5.079643 CCTCTTGATTTTCCTCTTTTGGGA 58.920 41.667 0.00 0.00 0.00 4.37
1165 1166 3.579151 ACCCTCTGTCTCTTGGAGTTTAC 59.421 47.826 0.00 0.00 0.00 2.01
1166 1167 3.835395 CCCTCTGTCTCTTGGAGTTTACT 59.165 47.826 0.00 0.00 0.00 2.24
1167 1168 4.322349 CCCTCTGTCTCTTGGAGTTTACTG 60.322 50.000 0.00 0.00 0.00 2.74
1168 1169 4.322349 CCTCTGTCTCTTGGAGTTTACTGG 60.322 50.000 0.00 0.00 0.00 4.00
1169 1170 4.480115 TCTGTCTCTTGGAGTTTACTGGA 58.520 43.478 0.00 0.00 0.00 3.86
1170 1171 4.524714 TCTGTCTCTTGGAGTTTACTGGAG 59.475 45.833 0.00 0.00 0.00 3.86
1171 1172 4.223953 TGTCTCTTGGAGTTTACTGGAGT 58.776 43.478 0.00 0.00 0.00 3.85
1172 1173 5.391256 TGTCTCTTGGAGTTTACTGGAGTA 58.609 41.667 0.00 0.00 0.00 2.59
1193 1194 3.160269 AGAAGGGAAAGCAAGTGATTGG 58.840 45.455 0.00 0.00 0.00 3.16
1197 1198 2.029918 GGGAAAGCAAGTGATTGGACAC 60.030 50.000 0.00 0.00 40.60 3.67
1236 1267 2.635714 CAACCGACATTAACCCTACCC 58.364 52.381 0.00 0.00 0.00 3.69
1254 1285 7.575129 ACCCTACCCAATTAATTACTCCAGTAT 59.425 37.037 0.00 0.00 0.00 2.12
1255 1286 9.108111 CCCTACCCAATTAATTACTCCAGTATA 57.892 37.037 0.00 0.00 0.00 1.47
1306 1337 3.127895 AGAGAAGTCCAGTTCGAATCGAG 59.872 47.826 5.24 0.00 37.14 4.04
1328 1359 0.624254 AATTCGTTTCCCTCCCCTCC 59.376 55.000 0.00 0.00 0.00 4.30
1330 1361 3.408853 CGTTTCCCTCCCCTCCCC 61.409 72.222 0.00 0.00 0.00 4.81
1331 1362 2.127528 GTTTCCCTCCCCTCCCCT 59.872 66.667 0.00 0.00 0.00 4.79
1332 1363 2.001838 GTTTCCCTCCCCTCCCCTC 61.002 68.421 0.00 0.00 0.00 4.30
1333 1364 3.283467 TTTCCCTCCCCTCCCCTCC 62.283 68.421 0.00 0.00 0.00 4.30
1406 1437 5.163642 CGTCCCTTCCCTATATATTCTGACG 60.164 48.000 0.00 0.00 35.44 4.35
1523 1554 3.850752 TGTGAGTCTTCCTCCTCTCTTT 58.149 45.455 0.00 0.00 39.65 2.52
1524 1555 3.829601 TGTGAGTCTTCCTCCTCTCTTTC 59.170 47.826 0.00 0.00 39.65 2.62
1525 1556 4.086457 GTGAGTCTTCCTCCTCTCTTTCT 58.914 47.826 0.00 0.00 39.65 2.52
1526 1557 4.157840 GTGAGTCTTCCTCCTCTCTTTCTC 59.842 50.000 0.00 0.00 39.65 2.87
1527 1558 4.044065 TGAGTCTTCCTCCTCTCTTTCTCT 59.956 45.833 0.00 0.00 39.65 3.10
1530 1561 5.480422 AGTCTTCCTCCTCTCTTTCTCTTTC 59.520 44.000 0.00 0.00 0.00 2.62
1531 1562 5.480422 GTCTTCCTCCTCTCTTTCTCTTTCT 59.520 44.000 0.00 0.00 0.00 2.52
4301 5668 6.038161 GTGCTGCAAACTGTTATATGTATGGA 59.962 38.462 2.77 0.00 0.00 3.41
4304 5671 8.230486 GCTGCAAACTGTTATATGTATGGATAC 58.770 37.037 0.00 0.00 0.00 2.24
4338 5705 8.314751 ACTAATCTAAATAAGTATGCGCCTCAT 58.685 33.333 4.18 0.00 39.17 2.90
4340 5707 6.346477 TCTAAATAAGTATGCGCCTCATCT 57.654 37.500 4.18 0.00 36.63 2.90
4460 5827 9.712359 ACTAAGAAAAACTTGTGTATTTTCGTC 57.288 29.630 0.00 0.00 44.03 4.20
4463 5830 5.838531 AAAACTTGTGTATTTTCGTCCCA 57.161 34.783 0.00 0.00 0.00 4.37
4465 5832 7.513371 AAAACTTGTGTATTTTCGTCCCATA 57.487 32.000 0.00 0.00 0.00 2.74
4470 5837 6.489127 TGTGTATTTTCGTCCCATAACAAG 57.511 37.500 0.00 0.00 0.00 3.16
4477 5844 7.605410 TTTTCGTCCCATAACAAGATAACTC 57.395 36.000 0.00 0.00 0.00 3.01
4513 5880 7.822334 TCAGAGAAAAAGAACTTTGTGTACAGA 59.178 33.333 0.00 0.00 32.36 3.41
4517 5884 6.679327 AAAAGAACTTTGTGTACAGACCTC 57.321 37.500 0.00 0.00 32.36 3.85
4541 5922 3.673594 CGATGAGTGGTAGTTCGCTTCTT 60.674 47.826 0.00 0.00 0.00 2.52
4554 5935 3.096852 TCGCTTCTTAGGACATCTCCAA 58.903 45.455 0.00 0.00 39.39 3.53
4557 5938 3.368531 GCTTCTTAGGACATCTCCAACGT 60.369 47.826 0.00 0.00 39.39 3.99
4562 5943 0.391263 GGACATCTCCAACGTGGACC 60.391 60.000 0.00 0.00 42.67 4.46
4581 5962 7.010738 CGTGGACCGTTAAAATTGACATACTAT 59.989 37.037 0.00 0.00 0.00 2.12
4593 5974 7.869016 ATTGACATACTATTATTCGTCCACG 57.131 36.000 0.00 0.00 41.45 4.94
4594 5975 5.765176 TGACATACTATTATTCGTCCACGG 58.235 41.667 0.00 0.00 40.29 4.94
4595 5976 5.532032 TGACATACTATTATTCGTCCACGGA 59.468 40.000 0.00 0.00 40.29 4.69
4596 5977 5.766222 ACATACTATTATTCGTCCACGGAC 58.234 41.667 6.12 6.12 41.40 4.79
4604 5985 2.657237 GTCCACGGACTGGTCTGG 59.343 66.667 9.04 8.23 41.52 3.86
4627 6008 0.452184 AGTCTGTGGACGCTGATACG 59.548 55.000 0.00 0.00 46.29 3.06
4662 6043 4.223032 TCAAATCCTGTCCTCTAAGTGTCC 59.777 45.833 0.00 0.00 0.00 4.02
4663 6044 2.992847 TCCTGTCCTCTAAGTGTCCA 57.007 50.000 0.00 0.00 0.00 4.02
4664 6045 2.526432 TCCTGTCCTCTAAGTGTCCAC 58.474 52.381 0.00 0.00 0.00 4.02
4666 6047 3.332783 TCCTGTCCTCTAAGTGTCCACTA 59.667 47.826 0.00 0.00 41.58 2.74
4692 6073 6.677781 TTTTTCTAGTTCCACAACACTCAG 57.322 37.500 0.00 0.00 34.60 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.986128 ACGCGTCATGAAAGTATTTTCG 58.014 40.909 5.58 0.00 44.55 3.46
2 3 4.953269 TGACGCGTCATGAAAGTATTTTC 58.047 39.130 36.40 7.18 37.93 2.29
17 18 1.858458 CCATGACGATAAATGACGCGT 59.142 47.619 13.85 13.85 39.99 6.01
18 19 2.124122 TCCATGACGATAAATGACGCG 58.876 47.619 3.53 3.53 0.00 6.01
19 20 3.555956 ACTTCCATGACGATAAATGACGC 59.444 43.478 0.00 0.00 0.00 5.19
20 21 4.025730 CCACTTCCATGACGATAAATGACG 60.026 45.833 0.00 0.00 0.00 4.35
21 22 5.006746 GTCCACTTCCATGACGATAAATGAC 59.993 44.000 0.00 0.00 0.00 3.06
22 23 5.116180 GTCCACTTCCATGACGATAAATGA 58.884 41.667 0.00 0.00 0.00 2.57
23 24 4.875536 TGTCCACTTCCATGACGATAAATG 59.124 41.667 0.00 0.00 0.00 2.32
24 25 4.876107 GTGTCCACTTCCATGACGATAAAT 59.124 41.667 0.00 0.00 0.00 1.40
25 26 4.020573 AGTGTCCACTTCCATGACGATAAA 60.021 41.667 0.00 0.00 38.83 1.40
26 27 3.513912 AGTGTCCACTTCCATGACGATAA 59.486 43.478 0.00 0.00 38.83 1.75
27 28 3.096852 AGTGTCCACTTCCATGACGATA 58.903 45.455 0.00 0.00 38.83 2.92
28 29 1.902508 AGTGTCCACTTCCATGACGAT 59.097 47.619 0.00 0.00 38.83 3.73
29 30 1.338107 AGTGTCCACTTCCATGACGA 58.662 50.000 0.00 0.00 38.83 4.20
30 31 3.914984 AGTGTCCACTTCCATGACG 57.085 52.632 0.00 0.00 38.83 4.35
47 48 6.918892 TTACCAACATTATCATCACGGAAG 57.081 37.500 0.00 0.00 0.00 3.46
48 49 6.826231 ACATTACCAACATTATCATCACGGAA 59.174 34.615 0.00 0.00 0.00 4.30
49 50 6.353323 ACATTACCAACATTATCATCACGGA 58.647 36.000 0.00 0.00 0.00 4.69
50 51 6.259829 TGACATTACCAACATTATCATCACGG 59.740 38.462 0.00 0.00 0.00 4.94
51 52 7.245419 TGACATTACCAACATTATCATCACG 57.755 36.000 0.00 0.00 0.00 4.35
52 53 8.077991 CCATGACATTACCAACATTATCATCAC 58.922 37.037 0.00 0.00 0.00 3.06
53 54 7.997803 TCCATGACATTACCAACATTATCATCA 59.002 33.333 0.00 0.00 0.00 3.07
54 55 8.394971 TCCATGACATTACCAACATTATCATC 57.605 34.615 0.00 0.00 0.00 2.92
55 56 8.632679 GTTCCATGACATTACCAACATTATCAT 58.367 33.333 0.00 0.00 0.00 2.45
56 57 7.613411 TGTTCCATGACATTACCAACATTATCA 59.387 33.333 0.00 0.00 0.00 2.15
57 58 7.915397 GTGTTCCATGACATTACCAACATTATC 59.085 37.037 0.00 0.00 0.00 1.75
58 59 7.615365 AGTGTTCCATGACATTACCAACATTAT 59.385 33.333 0.00 0.00 0.00 1.28
59 60 6.945435 AGTGTTCCATGACATTACCAACATTA 59.055 34.615 0.00 0.00 0.00 1.90
60 61 5.774690 AGTGTTCCATGACATTACCAACATT 59.225 36.000 0.00 0.00 0.00 2.71
61 62 5.324409 AGTGTTCCATGACATTACCAACAT 58.676 37.500 0.00 0.00 0.00 2.71
62 63 4.724399 AGTGTTCCATGACATTACCAACA 58.276 39.130 0.00 0.00 0.00 3.33
63 64 5.705609 AAGTGTTCCATGACATTACCAAC 57.294 39.130 0.00 0.00 0.00 3.77
64 65 7.279090 CGTATAAGTGTTCCATGACATTACCAA 59.721 37.037 0.00 0.00 0.00 3.67
65 66 6.759356 CGTATAAGTGTTCCATGACATTACCA 59.241 38.462 0.00 0.00 0.00 3.25
66 67 6.982141 TCGTATAAGTGTTCCATGACATTACC 59.018 38.462 0.00 0.00 0.00 2.85
67 68 7.490079 TGTCGTATAAGTGTTCCATGACATTAC 59.510 37.037 0.00 0.00 31.88 1.89
68 69 7.548967 TGTCGTATAAGTGTTCCATGACATTA 58.451 34.615 0.00 0.00 31.88 1.90
69 70 6.403049 TGTCGTATAAGTGTTCCATGACATT 58.597 36.000 0.00 0.00 31.88 2.71
70 71 5.972935 TGTCGTATAAGTGTTCCATGACAT 58.027 37.500 0.00 0.00 31.88 3.06
71 72 5.394224 TGTCGTATAAGTGTTCCATGACA 57.606 39.130 0.00 0.00 33.84 3.58
72 73 5.636121 TGTTGTCGTATAAGTGTTCCATGAC 59.364 40.000 0.00 0.00 0.00 3.06
73 74 5.636121 GTGTTGTCGTATAAGTGTTCCATGA 59.364 40.000 0.00 0.00 0.00 3.07
74 75 5.407084 TGTGTTGTCGTATAAGTGTTCCATG 59.593 40.000 0.00 0.00 0.00 3.66
75 76 5.543714 TGTGTTGTCGTATAAGTGTTCCAT 58.456 37.500 0.00 0.00 0.00 3.41
76 77 4.946445 TGTGTTGTCGTATAAGTGTTCCA 58.054 39.130 0.00 0.00 0.00 3.53
77 78 4.387862 CCTGTGTTGTCGTATAAGTGTTCC 59.612 45.833 0.00 0.00 0.00 3.62
78 79 4.986659 ACCTGTGTTGTCGTATAAGTGTTC 59.013 41.667 0.00 0.00 0.00 3.18
79 80 4.952460 ACCTGTGTTGTCGTATAAGTGTT 58.048 39.130 0.00 0.00 0.00 3.32
80 81 4.595762 ACCTGTGTTGTCGTATAAGTGT 57.404 40.909 0.00 0.00 0.00 3.55
81 82 6.252869 GTCATACCTGTGTTGTCGTATAAGTG 59.747 42.308 0.00 0.00 0.00 3.16
82 83 6.152323 AGTCATACCTGTGTTGTCGTATAAGT 59.848 38.462 0.00 0.00 0.00 2.24
83 84 6.561614 AGTCATACCTGTGTTGTCGTATAAG 58.438 40.000 0.00 0.00 0.00 1.73
84 85 6.519679 AGTCATACCTGTGTTGTCGTATAA 57.480 37.500 0.00 0.00 0.00 0.98
85 86 7.718314 AGATAGTCATACCTGTGTTGTCGTATA 59.282 37.037 0.00 0.00 0.00 1.47
86 87 6.546403 AGATAGTCATACCTGTGTTGTCGTAT 59.454 38.462 0.00 0.00 0.00 3.06
87 88 5.884232 AGATAGTCATACCTGTGTTGTCGTA 59.116 40.000 0.00 0.00 0.00 3.43
88 89 4.705507 AGATAGTCATACCTGTGTTGTCGT 59.294 41.667 0.00 0.00 0.00 4.34
89 90 5.250235 AGATAGTCATACCTGTGTTGTCG 57.750 43.478 0.00 0.00 0.00 4.35
90 91 6.631016 TCAAGATAGTCATACCTGTGTTGTC 58.369 40.000 0.00 0.00 31.53 3.18
91 92 6.605471 TCAAGATAGTCATACCTGTGTTGT 57.395 37.500 0.00 0.00 31.53 3.32
92 93 7.984050 AGAATCAAGATAGTCATACCTGTGTTG 59.016 37.037 0.00 0.00 31.02 3.33
93 94 7.984050 CAGAATCAAGATAGTCATACCTGTGTT 59.016 37.037 0.00 0.00 0.00 3.32
94 95 7.124901 ACAGAATCAAGATAGTCATACCTGTGT 59.875 37.037 0.00 0.00 0.00 3.72
95 96 7.495901 ACAGAATCAAGATAGTCATACCTGTG 58.504 38.462 0.00 0.00 0.00 3.66
96 97 7.343057 TGACAGAATCAAGATAGTCATACCTGT 59.657 37.037 0.00 0.00 33.02 4.00
97 98 7.720442 TGACAGAATCAAGATAGTCATACCTG 58.280 38.462 8.09 0.00 33.02 4.00
98 99 7.904558 TGACAGAATCAAGATAGTCATACCT 57.095 36.000 8.09 0.00 33.02 3.08
105 106 9.823647 ACGATTTTATGACAGAATCAAGATAGT 57.176 29.630 0.00 0.00 41.93 2.12
107 108 9.816354 TGACGATTTTATGACAGAATCAAGATA 57.184 29.630 0.00 0.00 41.93 1.98
108 109 8.722480 TGACGATTTTATGACAGAATCAAGAT 57.278 30.769 0.00 0.00 41.93 2.40
109 110 8.606602 CATGACGATTTTATGACAGAATCAAGA 58.393 33.333 0.00 0.00 41.93 3.02
110 111 7.854422 CCATGACGATTTTATGACAGAATCAAG 59.146 37.037 0.00 0.00 41.93 3.02
111 112 7.552330 TCCATGACGATTTTATGACAGAATCAA 59.448 33.333 0.00 0.00 41.93 2.57
112 113 7.011389 GTCCATGACGATTTTATGACAGAATCA 59.989 37.037 0.00 0.00 43.13 2.57
113 114 7.011389 TGTCCATGACGATTTTATGACAGAATC 59.989 37.037 0.00 0.00 34.95 2.52
114 115 6.823182 TGTCCATGACGATTTTATGACAGAAT 59.177 34.615 0.00 0.00 34.95 2.40
115 116 6.169800 TGTCCATGACGATTTTATGACAGAA 58.830 36.000 0.00 0.00 34.95 3.02
116 117 5.729510 TGTCCATGACGATTTTATGACAGA 58.270 37.500 0.00 0.00 34.95 3.41
117 118 6.609237 ATGTCCATGACGATTTTATGACAG 57.391 37.500 0.00 0.00 34.95 3.51
118 119 7.044798 TGTATGTCCATGACGATTTTATGACA 58.955 34.615 0.00 0.00 34.95 3.58
119 120 7.477144 TGTATGTCCATGACGATTTTATGAC 57.523 36.000 0.00 0.00 34.95 3.06
120 121 7.307930 GCATGTATGTCCATGACGATTTTATGA 60.308 37.037 5.39 0.00 43.99 2.15
121 122 6.798476 GCATGTATGTCCATGACGATTTTATG 59.202 38.462 5.39 0.00 43.99 1.90
122 123 6.486320 TGCATGTATGTCCATGACGATTTTAT 59.514 34.615 5.39 0.00 43.99 1.40
123 124 5.819901 TGCATGTATGTCCATGACGATTTTA 59.180 36.000 5.39 0.00 43.99 1.52
124 125 4.639755 TGCATGTATGTCCATGACGATTTT 59.360 37.500 5.39 0.00 43.99 1.82
125 126 4.198530 TGCATGTATGTCCATGACGATTT 58.801 39.130 5.39 0.00 43.99 2.17
126 127 3.807553 TGCATGTATGTCCATGACGATT 58.192 40.909 5.39 0.00 43.99 3.34
127 128 3.473923 TGCATGTATGTCCATGACGAT 57.526 42.857 5.39 0.00 43.99 3.73
128 129 2.977772 TGCATGTATGTCCATGACGA 57.022 45.000 5.39 0.00 43.99 4.20
129 130 3.059393 GTCATGCATGTATGTCCATGACG 60.059 47.826 25.43 0.00 43.99 4.35
130 131 3.878699 TGTCATGCATGTATGTCCATGAC 59.121 43.478 25.43 23.81 43.99 3.06
131 132 4.131596 CTGTCATGCATGTATGTCCATGA 58.868 43.478 25.43 13.89 43.99 3.07
132 133 4.131596 TCTGTCATGCATGTATGTCCATG 58.868 43.478 25.43 11.96 44.07 3.66
133 134 4.426736 TCTGTCATGCATGTATGTCCAT 57.573 40.909 25.43 0.00 0.00 3.41
134 135 3.910568 TCTGTCATGCATGTATGTCCA 57.089 42.857 25.43 17.30 0.00 4.02
135 136 5.124457 AGTTTTCTGTCATGCATGTATGTCC 59.876 40.000 25.43 14.20 0.00 4.02
136 137 6.187125 AGTTTTCTGTCATGCATGTATGTC 57.813 37.500 25.43 16.83 0.00 3.06
137 138 6.207221 TCAAGTTTTCTGTCATGCATGTATGT 59.793 34.615 25.43 0.00 0.00 2.29
138 139 6.525628 GTCAAGTTTTCTGTCATGCATGTATG 59.474 38.462 25.43 16.85 0.00 2.39
139 140 6.349611 GGTCAAGTTTTCTGTCATGCATGTAT 60.350 38.462 25.43 0.00 0.00 2.29
140 141 5.048782 GGTCAAGTTTTCTGTCATGCATGTA 60.049 40.000 25.43 14.98 0.00 2.29
141 142 4.261741 GGTCAAGTTTTCTGTCATGCATGT 60.262 41.667 25.43 0.46 0.00 3.21
142 143 4.022589 AGGTCAAGTTTTCTGTCATGCATG 60.023 41.667 21.07 21.07 0.00 4.06
143 144 4.147321 AGGTCAAGTTTTCTGTCATGCAT 58.853 39.130 0.00 0.00 0.00 3.96
144 145 3.554934 AGGTCAAGTTTTCTGTCATGCA 58.445 40.909 0.00 0.00 0.00 3.96
145 146 4.083271 GGTAGGTCAAGTTTTCTGTCATGC 60.083 45.833 0.00 0.00 0.00 4.06
146 147 4.152402 CGGTAGGTCAAGTTTTCTGTCATG 59.848 45.833 0.00 0.00 0.00 3.07
147 148 4.202326 ACGGTAGGTCAAGTTTTCTGTCAT 60.202 41.667 0.00 0.00 0.00 3.06
148 149 3.133362 ACGGTAGGTCAAGTTTTCTGTCA 59.867 43.478 0.00 0.00 0.00 3.58
149 150 3.493503 CACGGTAGGTCAAGTTTTCTGTC 59.506 47.826 0.00 0.00 0.00 3.51
150 151 3.463944 CACGGTAGGTCAAGTTTTCTGT 58.536 45.455 0.00 0.00 0.00 3.41
151 152 2.806244 CCACGGTAGGTCAAGTTTTCTG 59.194 50.000 0.00 0.00 0.00 3.02
152 153 2.809299 GCCACGGTAGGTCAAGTTTTCT 60.809 50.000 0.00 0.00 0.00 2.52
153 154 1.534163 GCCACGGTAGGTCAAGTTTTC 59.466 52.381 0.00 0.00 0.00 2.29
154 155 1.134037 TGCCACGGTAGGTCAAGTTTT 60.134 47.619 0.00 0.00 0.00 2.43
155 156 0.470766 TGCCACGGTAGGTCAAGTTT 59.529 50.000 0.00 0.00 0.00 2.66
156 157 0.470766 TTGCCACGGTAGGTCAAGTT 59.529 50.000 0.00 0.00 0.00 2.66
157 158 0.470766 TTTGCCACGGTAGGTCAAGT 59.529 50.000 0.00 0.00 0.00 3.16
158 159 0.872388 GTTTGCCACGGTAGGTCAAG 59.128 55.000 0.00 0.00 0.00 3.02
159 160 0.180642 TGTTTGCCACGGTAGGTCAA 59.819 50.000 0.00 0.00 0.00 3.18
160 161 0.533308 GTGTTTGCCACGGTAGGTCA 60.533 55.000 0.00 0.00 33.61 4.02
161 162 2.241171 GTGTTTGCCACGGTAGGTC 58.759 57.895 0.00 0.00 33.61 3.85
162 163 4.468007 GTGTTTGCCACGGTAGGT 57.532 55.556 0.00 0.00 33.61 3.08
169 170 2.473868 CGTGATGATACGTGTTTGCCAC 60.474 50.000 0.00 0.00 39.13 5.01
170 171 1.729517 CGTGATGATACGTGTTTGCCA 59.270 47.619 0.00 0.00 39.13 4.92
171 172 1.062002 CCGTGATGATACGTGTTTGCC 59.938 52.381 0.00 0.00 42.24 4.52
172 173 1.996898 TCCGTGATGATACGTGTTTGC 59.003 47.619 0.00 0.00 42.24 3.68
173 174 3.678072 ACTTCCGTGATGATACGTGTTTG 59.322 43.478 0.00 0.00 42.24 2.93
174 175 3.678072 CACTTCCGTGATGATACGTGTTT 59.322 43.478 0.00 0.00 43.97 2.83
175 176 3.250744 CACTTCCGTGATGATACGTGTT 58.749 45.455 0.00 0.00 43.97 3.32
176 177 2.230508 ACACTTCCGTGATGATACGTGT 59.769 45.455 0.00 0.00 43.97 4.49
177 178 2.876091 ACACTTCCGTGATGATACGTG 58.124 47.619 0.00 0.00 43.97 4.49
178 179 4.913335 ATACACTTCCGTGATGATACGT 57.087 40.909 0.00 0.00 43.97 3.57
179 180 6.583912 AAAATACACTTCCGTGATGATACG 57.416 37.500 0.00 0.00 43.97 3.06
206 207 3.497262 GTGGTTTCAGCAAGGTACACTAC 59.503 47.826 0.00 0.00 0.00 2.73
207 208 3.389983 AGTGGTTTCAGCAAGGTACACTA 59.610 43.478 0.00 0.00 36.30 2.74
208 209 2.172717 AGTGGTTTCAGCAAGGTACACT 59.827 45.455 0.00 0.00 33.51 3.55
209 210 2.572290 AGTGGTTTCAGCAAGGTACAC 58.428 47.619 0.00 0.00 0.00 2.90
210 211 2.948979 CAAGTGGTTTCAGCAAGGTACA 59.051 45.455 0.00 0.00 0.00 2.90
211 212 2.949644 ACAAGTGGTTTCAGCAAGGTAC 59.050 45.455 0.00 0.00 0.00 3.34
212 213 3.211045 GACAAGTGGTTTCAGCAAGGTA 58.789 45.455 0.00 0.00 0.00 3.08
213 214 2.024414 GACAAGTGGTTTCAGCAAGGT 58.976 47.619 0.00 0.00 0.00 3.50
214 215 2.023673 TGACAAGTGGTTTCAGCAAGG 58.976 47.619 0.00 0.00 0.00 3.61
215 216 3.996150 ATGACAAGTGGTTTCAGCAAG 57.004 42.857 0.00 0.00 0.00 4.01
216 217 4.734398 AAATGACAAGTGGTTTCAGCAA 57.266 36.364 0.00 0.00 0.00 3.91
217 218 4.402155 AGAAAATGACAAGTGGTTTCAGCA 59.598 37.500 0.00 0.00 31.94 4.41
218 219 4.936891 AGAAAATGACAAGTGGTTTCAGC 58.063 39.130 0.00 0.00 31.94 4.26
219 220 6.694411 CAGAAGAAAATGACAAGTGGTTTCAG 59.306 38.462 0.00 0.00 31.94 3.02
220 221 6.563422 CAGAAGAAAATGACAAGTGGTTTCA 58.437 36.000 0.00 0.00 31.94 2.69
221 222 5.460091 GCAGAAGAAAATGACAAGTGGTTTC 59.540 40.000 0.00 0.00 0.00 2.78
222 223 5.127682 AGCAGAAGAAAATGACAAGTGGTTT 59.872 36.000 0.00 0.00 0.00 3.27
223 224 4.646492 AGCAGAAGAAAATGACAAGTGGTT 59.354 37.500 0.00 0.00 0.00 3.67
224 225 4.210331 AGCAGAAGAAAATGACAAGTGGT 58.790 39.130 0.00 0.00 0.00 4.16
225 226 4.320788 GGAGCAGAAGAAAATGACAAGTGG 60.321 45.833 0.00 0.00 0.00 4.00
226 227 4.518211 AGGAGCAGAAGAAAATGACAAGTG 59.482 41.667 0.00 0.00 0.00 3.16
227 228 4.723309 AGGAGCAGAAGAAAATGACAAGT 58.277 39.130 0.00 0.00 0.00 3.16
228 229 4.142945 CGAGGAGCAGAAGAAAATGACAAG 60.143 45.833 0.00 0.00 0.00 3.16
229 230 3.748048 CGAGGAGCAGAAGAAAATGACAA 59.252 43.478 0.00 0.00 0.00 3.18
230 231 3.244215 ACGAGGAGCAGAAGAAAATGACA 60.244 43.478 0.00 0.00 0.00 3.58
231 232 3.330267 ACGAGGAGCAGAAGAAAATGAC 58.670 45.455 0.00 0.00 0.00 3.06
232 233 3.685139 ACGAGGAGCAGAAGAAAATGA 57.315 42.857 0.00 0.00 0.00 2.57
233 234 3.120060 CCAACGAGGAGCAGAAGAAAATG 60.120 47.826 0.00 0.00 41.22 2.32
234 235 3.077359 CCAACGAGGAGCAGAAGAAAAT 58.923 45.455 0.00 0.00 41.22 1.82
235 236 2.494059 CCAACGAGGAGCAGAAGAAAA 58.506 47.619 0.00 0.00 41.22 2.29
236 237 1.270839 CCCAACGAGGAGCAGAAGAAA 60.271 52.381 0.00 0.00 41.22 2.52
237 238 0.321671 CCCAACGAGGAGCAGAAGAA 59.678 55.000 0.00 0.00 41.22 2.52
238 239 0.832135 ACCCAACGAGGAGCAGAAGA 60.832 55.000 0.00 0.00 41.22 2.87
239 240 0.035458 AACCCAACGAGGAGCAGAAG 59.965 55.000 0.00 0.00 41.22 2.85
240 241 0.034896 GAACCCAACGAGGAGCAGAA 59.965 55.000 0.00 0.00 41.22 3.02
241 242 1.671742 GAACCCAACGAGGAGCAGA 59.328 57.895 0.00 0.00 41.22 4.26
242 243 1.738099 CGAACCCAACGAGGAGCAG 60.738 63.158 0.00 0.00 41.22 4.24
243 244 2.204461 TCGAACCCAACGAGGAGCA 61.204 57.895 0.00 0.00 41.22 4.26
244 245 1.737008 GTCGAACCCAACGAGGAGC 60.737 63.158 0.00 0.00 41.22 4.70
245 246 0.666577 GTGTCGAACCCAACGAGGAG 60.667 60.000 0.00 0.00 41.22 3.69
246 247 1.111116 AGTGTCGAACCCAACGAGGA 61.111 55.000 0.00 0.00 41.22 3.71
247 248 0.666577 GAGTGTCGAACCCAACGAGG 60.667 60.000 0.00 0.00 40.37 4.63
248 249 0.314302 AGAGTGTCGAACCCAACGAG 59.686 55.000 0.00 0.00 40.37 4.18
249 250 0.748450 AAGAGTGTCGAACCCAACGA 59.252 50.000 0.00 0.00 37.43 3.85
250 251 2.056577 GTAAGAGTGTCGAACCCAACG 58.943 52.381 0.00 0.00 0.00 4.10
251 252 3.382048 AGTAAGAGTGTCGAACCCAAC 57.618 47.619 0.00 0.00 0.00 3.77
252 253 5.620654 CGATAAGTAAGAGTGTCGAACCCAA 60.621 44.000 0.00 0.00 0.00 4.12
253 254 4.142534 CGATAAGTAAGAGTGTCGAACCCA 60.143 45.833 0.00 0.00 0.00 4.51
254 255 4.095483 TCGATAAGTAAGAGTGTCGAACCC 59.905 45.833 0.00 0.00 35.48 4.11
255 256 5.227238 TCGATAAGTAAGAGTGTCGAACC 57.773 43.478 0.00 0.00 35.48 3.62
256 257 7.536622 TCTTTTCGATAAGTAAGAGTGTCGAAC 59.463 37.037 14.15 0.00 44.53 3.95
257 258 7.587629 TCTTTTCGATAAGTAAGAGTGTCGAA 58.412 34.615 14.15 4.17 43.60 3.71
258 259 7.137490 TCTTTTCGATAAGTAAGAGTGTCGA 57.863 36.000 14.15 0.00 36.46 4.20
259 260 7.425915 CTCTTTTCGATAAGTAAGAGTGTCG 57.574 40.000 14.15 0.00 39.02 4.35
270 271 9.922305 GGATCAATTGTAACTCTTTTCGATAAG 57.078 33.333 9.11 9.11 0.00 1.73
271 272 8.889717 GGGATCAATTGTAACTCTTTTCGATAA 58.110 33.333 5.13 0.00 0.00 1.75
272 273 7.497909 GGGGATCAATTGTAACTCTTTTCGATA 59.502 37.037 5.13 0.00 0.00 2.92
273 274 6.318900 GGGGATCAATTGTAACTCTTTTCGAT 59.681 38.462 5.13 0.00 0.00 3.59
274 275 5.646360 GGGGATCAATTGTAACTCTTTTCGA 59.354 40.000 5.13 0.00 0.00 3.71
275 276 5.648092 AGGGGATCAATTGTAACTCTTTTCG 59.352 40.000 5.13 0.00 0.00 3.46
276 277 8.753497 ATAGGGGATCAATTGTAACTCTTTTC 57.247 34.615 5.13 0.00 0.00 2.29
277 278 9.628500 GTATAGGGGATCAATTGTAACTCTTTT 57.372 33.333 5.13 0.00 0.00 2.27
278 279 9.004231 AGTATAGGGGATCAATTGTAACTCTTT 57.996 33.333 5.13 0.64 0.00 2.52
279 280 8.568617 AGTATAGGGGATCAATTGTAACTCTT 57.431 34.615 5.13 0.00 0.00 2.85
280 281 8.432805 CAAGTATAGGGGATCAATTGTAACTCT 58.567 37.037 5.13 4.68 0.00 3.24
281 282 8.211629 ACAAGTATAGGGGATCAATTGTAACTC 58.788 37.037 5.13 0.00 0.00 3.01
282 283 7.993183 CACAAGTATAGGGGATCAATTGTAACT 59.007 37.037 5.13 1.37 0.00 2.24
283 284 7.228706 CCACAAGTATAGGGGATCAATTGTAAC 59.771 40.741 5.13 0.00 0.00 2.50
284 285 7.287061 CCACAAGTATAGGGGATCAATTGTAA 58.713 38.462 5.13 0.00 0.00 2.41
285 286 6.183361 CCCACAAGTATAGGGGATCAATTGTA 60.183 42.308 5.13 0.00 43.57 2.41
286 287 5.399038 CCCACAAGTATAGGGGATCAATTGT 60.399 44.000 5.13 0.00 43.57 2.71
287 288 5.072741 CCCACAAGTATAGGGGATCAATTG 58.927 45.833 0.00 0.00 43.57 2.32
288 289 5.324832 CCCACAAGTATAGGGGATCAATT 57.675 43.478 0.00 0.00 43.57 2.32
297 298 4.753516 TGTGATGACCCACAAGTATAGG 57.246 45.455 0.00 0.00 43.32 2.57
305 306 1.063183 TGGATGTGTGATGACCCACA 58.937 50.000 0.00 0.00 44.91 4.17
306 307 2.019249 CATGGATGTGTGATGACCCAC 58.981 52.381 0.00 0.00 37.55 4.61
307 308 1.064537 CCATGGATGTGTGATGACCCA 60.065 52.381 5.56 0.00 0.00 4.51
308 309 1.683943 CCATGGATGTGTGATGACCC 58.316 55.000 5.56 0.00 0.00 4.46
309 310 1.027357 GCCATGGATGTGTGATGACC 58.973 55.000 18.40 0.00 0.00 4.02
310 311 0.659427 CGCCATGGATGTGTGATGAC 59.341 55.000 18.40 0.00 0.00 3.06
311 312 0.464193 CCGCCATGGATGTGTGATGA 60.464 55.000 18.40 0.00 42.00 2.92
312 313 2.027325 CCGCCATGGATGTGTGATG 58.973 57.895 18.40 0.00 42.00 3.07
313 314 1.825191 GCCGCCATGGATGTGTGAT 60.825 57.895 18.40 0.00 42.00 3.06
314 315 2.438254 GCCGCCATGGATGTGTGA 60.438 61.111 18.40 0.00 42.00 3.58
315 316 3.879682 CGCCGCCATGGATGTGTG 61.880 66.667 18.40 2.55 42.00 3.82
317 318 4.854924 TCCGCCGCCATGGATGTG 62.855 66.667 18.40 11.70 42.00 3.21
318 319 4.552365 CTCCGCCGCCATGGATGT 62.552 66.667 18.40 0.00 42.00 3.06
327 328 4.214327 CTCTTCCTCCTCCGCCGC 62.214 72.222 0.00 0.00 0.00 6.53
328 329 3.532155 CCTCTTCCTCCTCCGCCG 61.532 72.222 0.00 0.00 0.00 6.46
329 330 2.364448 ACCTCTTCCTCCTCCGCC 60.364 66.667 0.00 0.00 0.00 6.13
330 331 1.045911 ATGACCTCTTCCTCCTCCGC 61.046 60.000 0.00 0.00 0.00 5.54
331 332 0.749649 CATGACCTCTTCCTCCTCCG 59.250 60.000 0.00 0.00 0.00 4.63
332 333 1.127343 CCATGACCTCTTCCTCCTCC 58.873 60.000 0.00 0.00 0.00 4.30
333 334 0.467804 GCCATGACCTCTTCCTCCTC 59.532 60.000 0.00 0.00 0.00 3.71
334 335 1.333636 CGCCATGACCTCTTCCTCCT 61.334 60.000 0.00 0.00 0.00 3.69
335 336 1.144936 CGCCATGACCTCTTCCTCC 59.855 63.158 0.00 0.00 0.00 4.30
336 337 0.179097 GTCGCCATGACCTCTTCCTC 60.179 60.000 0.00 0.00 42.04 3.71
337 338 1.901085 GTCGCCATGACCTCTTCCT 59.099 57.895 0.00 0.00 42.04 3.36
338 339 4.522971 GTCGCCATGACCTCTTCC 57.477 61.111 0.00 0.00 42.04 3.46
346 347 0.745486 CCTGATGCTTGTCGCCATGA 60.745 55.000 0.00 0.00 38.05 3.07
347 348 1.721664 CCCTGATGCTTGTCGCCATG 61.722 60.000 0.00 0.00 38.05 3.66
348 349 1.452651 CCCTGATGCTTGTCGCCAT 60.453 57.895 0.00 0.00 38.05 4.40
349 350 2.046023 CCCTGATGCTTGTCGCCA 60.046 61.111 0.00 0.00 38.05 5.69
350 351 1.372087 CTTCCCTGATGCTTGTCGCC 61.372 60.000 0.00 0.00 38.05 5.54
351 352 0.674895 ACTTCCCTGATGCTTGTCGC 60.675 55.000 0.00 0.00 39.77 5.19
352 353 1.081892 CACTTCCCTGATGCTTGTCG 58.918 55.000 0.00 0.00 0.00 4.35
353 354 1.003580 TCCACTTCCCTGATGCTTGTC 59.996 52.381 0.00 0.00 0.00 3.18
354 355 1.004044 CTCCACTTCCCTGATGCTTGT 59.996 52.381 0.00 0.00 0.00 3.16
355 356 1.004044 ACTCCACTTCCCTGATGCTTG 59.996 52.381 0.00 0.00 0.00 4.01
356 357 1.366319 ACTCCACTTCCCTGATGCTT 58.634 50.000 0.00 0.00 0.00 3.91
357 358 2.114616 CTACTCCACTTCCCTGATGCT 58.885 52.381 0.00 0.00 0.00 3.79
358 359 2.102252 CTCTACTCCACTTCCCTGATGC 59.898 54.545 0.00 0.00 0.00 3.91
359 360 3.131933 CACTCTACTCCACTTCCCTGATG 59.868 52.174 0.00 0.00 0.00 3.07
360 361 3.245803 ACACTCTACTCCACTTCCCTGAT 60.246 47.826 0.00 0.00 0.00 2.90
361 362 2.110188 ACACTCTACTCCACTTCCCTGA 59.890 50.000 0.00 0.00 0.00 3.86
362 363 2.530701 ACACTCTACTCCACTTCCCTG 58.469 52.381 0.00 0.00 0.00 4.45
363 364 3.699413 GTACACTCTACTCCACTTCCCT 58.301 50.000 0.00 0.00 0.00 4.20
364 365 2.422832 CGTACACTCTACTCCACTTCCC 59.577 54.545 0.00 0.00 0.00 3.97
365 366 2.422832 CCGTACACTCTACTCCACTTCC 59.577 54.545 0.00 0.00 0.00 3.46
366 367 2.159407 GCCGTACACTCTACTCCACTTC 60.159 54.545 0.00 0.00 0.00 3.01
367 368 1.817447 GCCGTACACTCTACTCCACTT 59.183 52.381 0.00 0.00 0.00 3.16
368 369 1.461559 GCCGTACACTCTACTCCACT 58.538 55.000 0.00 0.00 0.00 4.00
369 370 0.455005 GGCCGTACACTCTACTCCAC 59.545 60.000 0.00 0.00 0.00 4.02
370 371 0.038599 TGGCCGTACACTCTACTCCA 59.961 55.000 0.00 0.00 0.00 3.86
371 372 1.067212 CATGGCCGTACACTCTACTCC 59.933 57.143 0.00 0.00 0.00 3.85
372 373 1.067212 CCATGGCCGTACACTCTACTC 59.933 57.143 0.00 0.00 0.00 2.59
373 374 1.112113 CCATGGCCGTACACTCTACT 58.888 55.000 0.00 0.00 0.00 2.57
374 375 0.529992 GCCATGGCCGTACACTCTAC 60.530 60.000 27.24 0.00 34.56 2.59
375 376 1.820581 GCCATGGCCGTACACTCTA 59.179 57.895 27.24 0.00 34.56 2.43
376 377 2.584608 GCCATGGCCGTACACTCT 59.415 61.111 27.24 0.00 34.56 3.24
377 378 2.890474 CGCCATGGCCGTACACTC 60.890 66.667 30.79 0.24 37.98 3.51
378 379 3.387091 TCGCCATGGCCGTACACT 61.387 61.111 30.79 0.00 37.98 3.55
379 380 3.192922 GTCGCCATGGCCGTACAC 61.193 66.667 30.79 15.22 37.98 2.90
380 381 4.805231 CGTCGCCATGGCCGTACA 62.805 66.667 30.79 7.01 37.98 2.90
381 382 4.501714 TCGTCGCCATGGCCGTAC 62.502 66.667 30.79 23.16 37.98 3.67
382 383 4.201679 CTCGTCGCCATGGCCGTA 62.202 66.667 30.79 13.97 37.98 4.02
396 397 3.701604 CTTTCCCCCTCGACGCTCG 62.702 68.421 0.00 1.67 42.10 5.03
397 398 2.184579 CTTTCCCCCTCGACGCTC 59.815 66.667 0.00 0.00 0.00 5.03
398 399 3.391382 CCTTTCCCCCTCGACGCT 61.391 66.667 0.00 0.00 0.00 5.07
399 400 3.372554 CTCCTTTCCCCCTCGACGC 62.373 68.421 0.00 0.00 0.00 5.19
400 401 2.722201 CCTCCTTTCCCCCTCGACG 61.722 68.421 0.00 0.00 0.00 5.12
401 402 1.305887 TCCTCCTTTCCCCCTCGAC 60.306 63.158 0.00 0.00 0.00 4.20
402 403 1.001760 CTCCTCCTTTCCCCCTCGA 59.998 63.158 0.00 0.00 0.00 4.04
403 404 2.066999 CCTCCTCCTTTCCCCCTCG 61.067 68.421 0.00 0.00 0.00 4.63
404 405 0.692756 CTCCTCCTCCTTTCCCCCTC 60.693 65.000 0.00 0.00 0.00 4.30
405 406 1.398234 CTCCTCCTCCTTTCCCCCT 59.602 63.158 0.00 0.00 0.00 4.79
406 407 1.694525 CCTCCTCCTCCTTTCCCCC 60.695 68.421 0.00 0.00 0.00 5.40
407 408 0.692756 CTCCTCCTCCTCCTTTCCCC 60.693 65.000 0.00 0.00 0.00 4.81
408 409 0.692756 CCTCCTCCTCCTCCTTTCCC 60.693 65.000 0.00 0.00 0.00 3.97
409 410 0.340208 TCCTCCTCCTCCTCCTTTCC 59.660 60.000 0.00 0.00 0.00 3.13
410 411 1.691163 CCTCCTCCTCCTCCTCCTTTC 60.691 61.905 0.00 0.00 0.00 2.62
411 412 0.341609 CCTCCTCCTCCTCCTCCTTT 59.658 60.000 0.00 0.00 0.00 3.11
412 413 0.556380 TCCTCCTCCTCCTCCTCCTT 60.556 60.000 0.00 0.00 0.00 3.36
413 414 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
421 422 0.031616 ACCATGACCTCCTCCTCCTC 60.032 60.000 0.00 0.00 0.00 3.71
434 435 0.176449 CCAGATGCTCGTCACCATGA 59.824 55.000 0.00 0.00 0.00 3.07
439 440 0.247736 ACTTCCCAGATGCTCGTCAC 59.752 55.000 0.00 0.00 0.00 3.67
440 441 0.247460 CACTTCCCAGATGCTCGTCA 59.753 55.000 0.00 0.00 0.00 4.35
443 444 0.179089 CTCCACTTCCCAGATGCTCG 60.179 60.000 0.00 0.00 0.00 5.03
451 452 1.194781 GCACTCTCCTCCACTTCCCA 61.195 60.000 0.00 0.00 0.00 4.37
472 473 4.794439 CGCTCGTCGCCATGTCCA 62.794 66.667 0.00 0.00 34.21 4.02
474 475 3.248171 GACGCTCGTCGCCATGTC 61.248 66.667 6.67 0.00 43.23 3.06
496 497 1.003233 GCCGCACTCCTCCTTTCTT 60.003 57.895 0.00 0.00 0.00 2.52
503 504 2.512515 GACATGGCCGCACTCCTC 60.513 66.667 0.00 0.00 0.00 3.71
532 533 3.206412 TCCTCTTGCTAATCCTCTCTCCT 59.794 47.826 0.00 0.00 0.00 3.69
534 535 4.892934 TCTTCCTCTTGCTAATCCTCTCTC 59.107 45.833 0.00 0.00 0.00 3.20
548 549 4.647399 CCCTCGTATCTTCTTCTTCCTCTT 59.353 45.833 0.00 0.00 0.00 2.85
553 554 3.737032 CCCCCTCGTATCTTCTTCTTC 57.263 52.381 0.00 0.00 0.00 2.87
571 572 2.750350 CACGCATATCCCTCCCCC 59.250 66.667 0.00 0.00 0.00 5.40
575 576 2.032681 GGCCCACGCATATCCCTC 59.967 66.667 0.00 0.00 36.38 4.30
638 639 2.764547 TGTCGACCACACCCACCA 60.765 61.111 14.12 0.00 0.00 4.17
655 656 2.728383 CAACTTCGCGTCGGTCGT 60.728 61.111 5.77 0.00 42.13 4.34
666 667 2.674084 GGCACGCGGTACCAACTTC 61.674 63.158 12.47 0.00 0.00 3.01
672 673 2.287457 TACATCTGGCACGCGGTACC 62.287 60.000 12.47 9.43 0.00 3.34
676 677 1.423845 GTTTACATCTGGCACGCGG 59.576 57.895 12.47 0.00 0.00 6.46
677 678 1.058748 CGTTTACATCTGGCACGCG 59.941 57.895 3.53 3.53 0.00 6.01
711 712 0.402504 AACCCGCCAAAGTCCATGTA 59.597 50.000 0.00 0.00 0.00 2.29
728 729 7.500720 TTAGCCCTCTAACTTTGTGTTAAAC 57.499 36.000 0.00 0.00 40.24 2.01
729 730 8.700439 ATTTAGCCCTCTAACTTTGTGTTAAA 57.300 30.769 0.00 0.00 40.24 1.52
785 786 1.405661 GGGACACACGGGAGAAAGATC 60.406 57.143 0.00 0.00 0.00 2.75
805 806 1.359848 CACCGGACATCTTTTCCTCG 58.640 55.000 9.46 0.00 0.00 4.63
908 909 3.554692 GAATCACACGCGCCCGAG 61.555 66.667 5.73 0.00 38.29 4.63
1007 1008 2.311688 GACCAAGGCATCGACGGGAT 62.312 60.000 0.00 0.00 35.09 3.85
1008 1009 3.000819 ACCAAGGCATCGACGGGA 61.001 61.111 0.00 0.00 0.00 5.14
1009 1010 2.511600 GACCAAGGCATCGACGGG 60.512 66.667 0.00 0.00 0.00 5.28
1010 1011 2.511600 GGACCAAGGCATCGACGG 60.512 66.667 0.00 0.00 0.00 4.79
1011 1012 2.885644 CGGACCAAGGCATCGACG 60.886 66.667 0.00 0.00 0.00 5.12
1012 1013 1.810030 GACGGACCAAGGCATCGAC 60.810 63.158 0.00 0.00 0.00 4.20
1013 1014 2.577059 GACGGACCAAGGCATCGA 59.423 61.111 0.00 0.00 0.00 3.59
1014 1015 2.885644 CGACGGACCAAGGCATCG 60.886 66.667 0.00 0.00 0.00 3.84
1015 1016 1.810030 GACGACGGACCAAGGCATC 60.810 63.158 0.00 0.00 0.00 3.91
1016 1017 2.264794 GACGACGGACCAAGGCAT 59.735 61.111 0.00 0.00 0.00 4.40
1017 1018 3.998672 GGACGACGGACCAAGGCA 61.999 66.667 0.00 0.00 0.00 4.75
1018 1019 3.934391 CTGGACGACGGACCAAGGC 62.934 68.421 14.85 0.00 37.53 4.35
1019 1020 2.261671 CTGGACGACGGACCAAGG 59.738 66.667 14.85 3.72 37.53 3.61
1020 1021 2.432628 GCTGGACGACGGACCAAG 60.433 66.667 14.85 10.85 37.53 3.61
1097 1098 1.010795 AAAATCAAGAGGGGAGGGGG 58.989 55.000 0.00 0.00 0.00 5.40
1104 1105 4.221482 CCCAAAAGAGGAAAATCAAGAGGG 59.779 45.833 0.00 0.00 0.00 4.30
1105 1106 5.079643 TCCCAAAAGAGGAAAATCAAGAGG 58.920 41.667 0.00 0.00 0.00 3.69
1106 1107 6.847421 ATCCCAAAAGAGGAAAATCAAGAG 57.153 37.500 0.00 0.00 36.85 2.85
1107 1108 7.616528 AAATCCCAAAAGAGGAAAATCAAGA 57.383 32.000 0.00 0.00 36.85 3.02
1108 1109 8.681486 AAAAATCCCAAAAGAGGAAAATCAAG 57.319 30.769 0.00 0.00 36.85 3.02
1135 1136 4.829492 CCAAGAGACAGAGGGTTTCAAAAT 59.171 41.667 0.00 0.00 33.18 1.82
1149 1150 4.223953 ACTCCAGTAAACTCCAAGAGACA 58.776 43.478 0.00 0.00 33.32 3.41
1150 1151 4.875561 ACTCCAGTAAACTCCAAGAGAC 57.124 45.455 0.00 0.00 33.32 3.36
1151 1152 5.888901 TCTACTCCAGTAAACTCCAAGAGA 58.111 41.667 0.00 0.00 33.32 3.10
1152 1153 6.350612 CCTTCTACTCCAGTAAACTCCAAGAG 60.351 46.154 0.00 0.00 35.52 2.85
1165 1166 3.008485 ACTTGCTTTCCCTTCTACTCCAG 59.992 47.826 0.00 0.00 0.00 3.86
1166 1167 2.979678 ACTTGCTTTCCCTTCTACTCCA 59.020 45.455 0.00 0.00 0.00 3.86
1167 1168 3.008049 TCACTTGCTTTCCCTTCTACTCC 59.992 47.826 0.00 0.00 0.00 3.85
1168 1169 4.273148 TCACTTGCTTTCCCTTCTACTC 57.727 45.455 0.00 0.00 0.00 2.59
1169 1170 4.917906 ATCACTTGCTTTCCCTTCTACT 57.082 40.909 0.00 0.00 0.00 2.57
1170 1171 4.156739 CCAATCACTTGCTTTCCCTTCTAC 59.843 45.833 0.00 0.00 0.00 2.59
1171 1172 4.042809 TCCAATCACTTGCTTTCCCTTCTA 59.957 41.667 0.00 0.00 0.00 2.10
1172 1173 3.160269 CCAATCACTTGCTTTCCCTTCT 58.840 45.455 0.00 0.00 0.00 2.85
1193 1194 4.651994 CGGCAATTAATGAGACAAGTGTC 58.348 43.478 3.12 3.12 45.08 3.67
1197 1198 3.763097 TGCGGCAATTAATGAGACAAG 57.237 42.857 0.00 0.00 0.00 3.16
1254 1285 7.038587 TGCTTCCATTCTGTTAGGAACTACTTA 60.039 37.037 0.00 0.00 42.67 2.24
1255 1286 6.174049 GCTTCCATTCTGTTAGGAACTACTT 58.826 40.000 0.00 0.00 42.67 2.24
1256 1287 5.248477 TGCTTCCATTCTGTTAGGAACTACT 59.752 40.000 0.00 0.00 42.67 2.57
1257 1288 5.488341 TGCTTCCATTCTGTTAGGAACTAC 58.512 41.667 0.00 0.00 42.67 2.73
1379 1410 4.296852 AGAATATATAGGGAAGGGACGGGA 59.703 45.833 0.00 0.00 0.00 5.14
1386 1417 4.141914 GGGCGTCAGAATATATAGGGAAGG 60.142 50.000 0.00 0.00 0.00 3.46
1488 1519 0.741927 CTCACATCATCAGCCGCACA 60.742 55.000 0.00 0.00 0.00 4.57
1491 1522 0.179089 AGACTCACATCATCAGCCGC 60.179 55.000 0.00 0.00 0.00 6.53
1523 1554 2.294074 GCTCTCGCTCCTAGAAAGAGA 58.706 52.381 2.03 0.00 36.42 3.10
1524 1555 1.002900 CGCTCTCGCTCCTAGAAAGAG 60.003 57.143 0.00 0.00 37.20 2.85
1525 1556 1.018148 CGCTCTCGCTCCTAGAAAGA 58.982 55.000 0.00 0.00 0.00 2.52
1526 1557 1.002900 CTCGCTCTCGCTCCTAGAAAG 60.003 57.143 0.00 0.00 35.26 2.62
1527 1558 1.018148 CTCGCTCTCGCTCCTAGAAA 58.982 55.000 0.00 0.00 35.26 2.52
1530 1561 2.637025 GCTCGCTCTCGCTCCTAG 59.363 66.667 0.00 0.00 35.26 3.02
1531 1562 3.273084 CGCTCGCTCTCGCTCCTA 61.273 66.667 0.00 0.00 35.26 2.94
4262 5629 1.391485 GCAGCACGTTATCTCTGTGTG 59.609 52.381 0.00 0.00 36.04 3.82
4309 5676 7.328737 AGGCGCATACTTATTTAGATTAGTTCG 59.671 37.037 10.83 0.00 0.00 3.95
4320 5687 3.499918 GCAGATGAGGCGCATACTTATTT 59.500 43.478 10.83 0.00 37.34 1.40
4325 5692 0.531532 GTGCAGATGAGGCGCATACT 60.532 55.000 10.83 0.00 41.27 2.12
4338 5705 0.398696 TTTTTAGGGGAGCGTGCAGA 59.601 50.000 0.00 0.00 0.00 4.26
4340 5707 1.231958 CGTTTTTAGGGGAGCGTGCA 61.232 55.000 0.00 0.00 0.00 4.57
4398 5765 1.684450 TCTTGGACTAACGCACTGTCA 59.316 47.619 0.00 0.00 32.84 3.58
4438 5805 6.095720 TGGGACGAAAATACACAAGTTTTTCT 59.904 34.615 0.00 0.00 35.28 2.52
4445 5812 6.489127 TGTTATGGGACGAAAATACACAAG 57.511 37.500 0.00 0.00 0.00 3.16
4449 5816 8.885722 GTTATCTTGTTATGGGACGAAAATACA 58.114 33.333 0.00 0.00 0.00 2.29
4450 5817 9.106070 AGTTATCTTGTTATGGGACGAAAATAC 57.894 33.333 0.00 0.00 0.00 1.89
4454 5821 6.816640 CAGAGTTATCTTGTTATGGGACGAAA 59.183 38.462 0.00 0.00 31.64 3.46
4455 5822 6.070995 ACAGAGTTATCTTGTTATGGGACGAA 60.071 38.462 0.00 0.00 31.64 3.85
4460 5827 7.106239 ACTGAACAGAGTTATCTTGTTATGGG 58.894 38.462 8.87 0.00 31.64 4.00
4463 5830 9.778741 TGAAACTGAACAGAGTTATCTTGTTAT 57.221 29.630 8.87 0.00 35.01 1.89
4465 5832 7.987458 TCTGAAACTGAACAGAGTTATCTTGTT 59.013 33.333 8.87 0.00 38.08 2.83
4477 5844 7.756558 AGTTCTTTTTCTCTGAAACTGAACAG 58.243 34.615 23.08 0.00 36.16 3.16
4513 5880 0.680280 ACTACCACTCATCGCGAGGT 60.680 55.000 21.22 20.13 46.98 3.85
4517 5884 2.566997 CGAACTACCACTCATCGCG 58.433 57.895 0.00 0.00 0.00 5.87
4541 5922 2.225382 TCCACGTTGGAGATGTCCTA 57.775 50.000 10.72 0.00 42.67 2.94
4557 5938 8.795842 AATAGTATGTCAATTTTAACGGTCCA 57.204 30.769 0.00 0.00 0.00 4.02
4570 5951 6.039605 TCCGTGGACGAATAATAGTATGTCAA 59.960 38.462 0.00 0.00 43.02 3.18
4604 5985 1.373497 CAGCGTCCACAGACTGGTC 60.373 63.158 7.51 0.00 41.52 4.02
4613 5994 1.065928 CTCCCGTATCAGCGTCCAC 59.934 63.158 0.00 0.00 0.00 4.02
4614 5995 2.782222 GCTCCCGTATCAGCGTCCA 61.782 63.158 0.00 0.00 0.00 4.02
4618 5999 4.647615 CCGGCTCCCGTATCAGCG 62.648 72.222 2.75 0.00 46.80 5.18
4619 6000 3.501458 GACCGGCTCCCGTATCAGC 62.501 68.421 0.00 0.00 46.80 4.26
4627 6008 0.819666 GGATTTGATGACCGGCTCCC 60.820 60.000 0.00 0.00 0.00 4.30
4639 6020 4.223032 GGACACTTAGAGGACAGGATTTGA 59.777 45.833 0.00 0.00 0.00 2.69
4709 6090 9.890085 CGCTTTGTAATTTATGAATGAATTGTG 57.110 29.630 3.92 0.00 30.12 3.33
4710 6091 9.853555 TCGCTTTGTAATTTATGAATGAATTGT 57.146 25.926 3.92 0.00 30.12 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.