>input_sequence_28415
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----------------------------------------ATGCCGCATCCCGTCGATGCCTTGGTCCGTCGTCCAGCGT
CCAGGCAAGATTCTGTTGGTGTAGCCATGCGCCTCGAGTCTCCGATTCATTTCTTCTCCCCCTCCCCTCTTGATTTTCCT
CTTTTGGGATTTTTTATTTTGAAACCCTCTGTCTCTTGGAGTTTACTGGAGTAGAAGGGAAAGCAAGTGATTGGACACTT
GTCTCATTAATTG------------------------------CCGCAACCGACATTAACCCTACCCAATTAATTACTCC
AGTATAAGTAGTTCCTAACAGAATGGAAGCAAAAAGAGAAGTCCAGTTCGAATCGAGCGAATTCGTTTCCCTCCCCTCCC
CTCCCGTCCCCTCCCGGCTCCTGGGCAGGCCAGCAAGCAGCCCGTCCCGTCCCGTCCCTTCCCTATATATTCTGACGCCC
ATCCTGCCTCGCGGGCCTCGTGAGAAAGGGGTCGCGGCCGAGTTGGAGATGGATCCAGAAGAGGGGAGCAAGCGCGCTTG
TGCGGCTGATGATGTGAGTCTTCCTCCTCTCTTTCTCTTTCT----------------------------AGGAGCGAGA
GCGAGCGTCTGATCCGAATTCTCTAGGAGCGAGAGCGAGAGCGAGCGTCTGATCCGAATTCTCTAGGAGCGAGAGCGAGA
GCGAGCGTCTGATTCCAGTTATTTGCTGATCCAAATACTTGTACGAGCACCGGATTCGAATTATTTGCTGACCCAAATAT
TTGTACGAG-CATCGGATTCGAATTTATTTGCTGATGATCCAAATACTTGTACGAGCATCGGATTCGAATTTATTTGCTG
ATGATCCAAATACTTGTGCGAGCATCGGATTCGAATTTATTTGCTGATGATCCAAATACTTGTACGAGCATCGGATTCCA
ATTTATTTGCTGATGATCCAAATACTTGTGCGAGCATCGGATTCGAATTTATTCGCTGATCCAAATACTTGTACGAGCAT
CTGATTCGAATTATTTCCTGTCCCAAATAGGAGTACTTCGTACGAGCATCTGGTTCGAATTATTTGCTGATTTCTGATCC
ATA---TACTACTATTTGCTTGGTGCAGAGCACGGACACCGTCGGCCTCACAGCGGGATGGGCAGACATTCCCCGCGAGC
TGCTTCCAGTTGTGCTCTCCCGCCTGCCATGTCCGGTAGATCGTCTCCGGTTCTCCGTCGTCAACAAGAAATGGCACGGG
TTCTTGGAACAACACCGTCGTGATCTCCATCTTCCTCCACTACTCCCGTCATTGGTGCTACCGTCGTCTTCTCCAGAGCA
CCCTCTGGTCCACGTAACACAGGGAGGGAACACCCGGCGCCTCGGACTCCCACCAGACATCAAGCAGAGAGCAAGTTTCT
GTGGATCCTACCAAGGGGGGTGGTTCGTCCTCGCTCTTGATGGACCACTGGACAACAGACTGTTCAACATATTCTCCGGC
GTCAGCATTCCGATGCCAACGACGACAATGGTGGACGGGCGTGCACGATATATCCGAGTTGAGGCAGCAGCTCTCTCAGG
GTCGCCAGTTCTGGACCCACCATACAACTACACCATCGGCGCGATTGCAAGGATCCAGGGCAATGACTTCTCTGGCATTG
CACTATGGGACCCGTCCAAGGAGCACTGGACGTGCATTGACTGGGATCTCATCCCAACGCACAGTCTGGATATACACGAT
GTGGTATACTCCAATGGCAGCTTTTACTTCCTCAACTCTTATGAGAACATGGAGAGAATTGGAGCTCATCCCAACCGTGA
GGGAGTCCCACCCCCACCCCGTCTGGAGATTTATGTCGAGAAGGATTGGGAGATATATGATGAGGAACACCCGGAGAACA
TGACAGTCCAGCGGTATTTGGTTAATCTTGGAGGTATGGAGGAGGATAATCCTTTCCTGATGGTGCTCAAGTATCAAGAT
GAGCCTACGCAACCCACTTCCTCTGTGCGCGTGTTCAGGCTAAGCGAGGTTGATGAACCTGACGCTCCAGAGTACCCTGA
GGATGTGGAGCCCCGTCTCCACTGGCATGAGCTAGATCCCAGCTCCAAGTCGGACCATGAGTTTTTCCTTGAGGCCAAGC
TCATATTCATTGGGCGTGGTTGCTCCAGGATCTTCAATGCCAGTGATTTTGAGGATCTCGACGACAAGTTCCGCACCGGA
GTGTCCATTTTCTTCTACGACGACCGTGGCGTCGAGGACCAAGAATGCTTCCTGCGTGGTGACATGGGAAGATTCACTCT
GCCGGAGGCCCAAGTTGAGCCGTGGCCGCCGGTCGGCAGCCAAGCAATCGGGCCACGGTCGCGCAAGTTCCCTCCTACCT
GGTGGATTCACTGATATGTTGACCCAGATTGGGGACTGAACATTATTCCCTCTCTGCAACTTAGTCCTCTGCTTCCATTG
AGTAGGCCACTAGGGCA-------ACAGAGATAACGTGCTGCAAACTGTTATACTAGCAGGCAAAAGACCGCGCCCATGG
GAAAGCCAGTGTGAGTGGCTGTTGCTGCTCTAGTTAAGAAAATGGAATGGGAAACGGGAGGCACCAGCAGATCGAAAAAC
AGTTTTGGCTGGGGGGCTGTTTTCATGTGTGTCCTCGTATGTTGTTTTGTTGCAGGCAATGGGCTGAACCATTTGTTGGA
TACTGATCTATACATTGTTCATTTGTAACTAAACCTTTTTTGGATCAATGCAAGCTTCCAATTCGGGTTTGTTTGCGGTT
GGTAACAGTTGGTGCTTGTACATGAAACGCTCAGCTGCGAATGAATAGGCATGCATCGT---------------------
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---------------------------------------------------
>chr1B_1_TraesCS1B01G305300
ACGAAAATACTTTCATGACGCGTCATTTATCGTCATGGAAGTGGACACTTCCGTGATGATAATGTTGGTAATGTCATGGA
ACACTTATACGACAACACAGGTATGACTATCTTGATTCTGTCATAAAATCGTCATGGACATACATGCATGACAGAAAACT
TGACCTACCGTGGCAAACACGTATCATCACGGAAGTGTATTTTTTGGTAGTGTACCTTGCTGAAACCACTTGTCATTTTC
TTCTGCTCCTCGTTGGGTTCGACACTCTTACTTATCGAAAAGAGTTACAATTGATCCCCTATACTTGTGGGTCATCACAC
ATCCATGGCGGCGGAGGAGGAAGAGGTCATGGCGACAAGCATCAGGGAAGTGGAGTAGAGTGTACGGCCATGGCGACGAG
CGTCGAGGGGGAAAGGAGGAGGAGGAGGAGGAGGTCATGGTGACGAGCATCTGGGAAGTGGAGGAGAGTGCATGGACATG
GCGACGAGCGTCGAGGAAGAAAGGAGGAGTGCGGCCATGTCGGCGCGCATCGAGGAGAGAGGATTAGCAAGAGGAAGAAG
AAGATACGAGGGGGGGAGGGATATGCGTGGGCCCTCAAGGACGGGCGGCGCCCCGGCGTTGGTGGGTGTGCGTGGCGTTG
GTGGGTGTGGTCGACACGACCGACGCGAAGTTGGTACCGCGTGCCAGATGTAAACGTTTTCCATATAGAAATACATGGAC
TTTGGCGGGTTTAACACAAAGTTAGAGGGCTAAATCAATAAATAGCCCAATGGATAAGAATCCCCGATCTTTCTCCCGTG
TGTCCCGAGGAAAAGATGTCCGGTGCCGGCCGGGAGGCCCTGCTCGCCGTGCGCCAGAGGCCGCTGATGTGTTGGTCGCG
TGGCGCGCGCCCTGCTCCGGCGAGAGGGCTCGGGCGCGTGTGATTCGGCGGCGGCGGCGGCGGCGGGGACGAAGCCGCTG
CAGCCGGCGTCTTGGTCCAGTGCGGGAGTGAAGCCAGGCGATGCCGCATCCCGTCGATGCCTTGGTCCGTCGTCCAGCGT
CCAGGCAAGATTCTGTTGGTGTAGCCATGCGCCTCGAGTCTCCGATTCATTTCTTCTCCCCCTCCCCTCTTGATTTTCCT
CTTTTGGGATTTTTTATTTTGAAACCCTCTGTCTCTTGGAGTTTACTGGAGTAGAAGGGAAAGCAAGTGATTGGACACTT
GTCTCATTAATTG------------------------------CCGCAACCGACATTAACCCTACCCAATTAATTACTCC
AGTATAAGTAGTTCCTAACAGAATGGAAGCAAAAAGAGAAGTCCAGTTCGAATCGAGCGAATTCGTTTCCCTCCCCTCCC
CTCCCGTCCCCTCCCGGCTCCTGGGCAGGCCAGCAAGCAGCCCGTCCCGTCCCGTCCCTTCCCTATATATTCTGACGCCC
ATCCTGCCTCGCGGGCCTCGTGAGAAAGGGGTCGCGGCCGAGTTGGAGATGGATCCAGAAGAGGGGAGCAAGCGCGCTTG
TGCGGCTGATGATGTGAGTCTTCCTCCTCTCTTTCTCTTTCT----------------------------AGGAGCGAGA
GCGAGCGTCTGATCCGAATTCTCTAGGAGCGAGAGCGAGAGCGAGCGTCTGATCCGAATTCTCTAGGAGCGAGAGCGAGA
GCGAGCGTCTGATTCCAGTTATTTGCTGATCCAAATACTTGTACGAGCACCGGATTCGAATTATTTGCTGACCCAAATAT
TTGTACGAG-CATCGGATTCGAATTTATTTGCTGATGATCCAAATACTTGTACGAGCATCGGATTCGAATTTATTTGCTG
ATGATCCAAATACTTGTGCGAGCATCGGATTCGAATTTATTTGCTGATGATCCAAATACTTGTACGAGCATCGGATTCCA
ATTTATTTGCTGATGATCCAAATACTTGTGCGAGCATCGGATTCGAATTTATTCGCTGATCCAAATACTTGTACGAGCAT
CTGATTCGAATTATTTCCTGTCCCAAATAGGAGTACTTCGTACGAGCATCTGGTTCGAATTATTTGCTGATTTCTGATCC
ATA---TACTACTATTTGCTTGGTGCAGAGCACGGACACCGTCGGCCTCACAGCGGGATGGGCAGACATTCCCCGCGAGC
TGCTTCCAGTTGTGCTCTCCCGCCTGCCATGTCCGGTAGATCGTCTCCGGTTCTCCGTCGTCAACAAGAAATGGCACGGG
TTCTTGGAACAACACCGTCGTGATCTCCATCTTCCTCCACTACTCCCGTCATTGGTGCTACCGTCGTCTTCTCCAGAGCA
CCCTCTGGTCCACGTAACACAGGGAGGGAACACCCGGCGCCTCGGACTCCCACCAGACATCAAGCAGAGAGCAAGTTTCT
GTGGATCCTACCAAGGGGGGTGGTTCGTCCTCGCTCTTGATGGACCACTGGACAACAGACTGTTCAACATATTCTCCGGC
GTCAGCATTCCGATGCCAACGACGACAATGGTGGACGGGCGTGCACGATATATCCGAGTTGAGGCAGCAGCTCTCTCAGG
GTCGCCAGTTCTGGACCCACCATACAACTACACCATCGGCGCGATTGCAAGGATCCAGGGCAATGACTTCTCTGGCATTG
CACTATGGGACCCGTCCAAGGAGCACTGGACGTGCATTGACTGGGATCTCATCCCAACGCACAGTCTGGATATACACGAT
GTGGTATACTCCAATGGCAGCTTTTACTTCCTCAACTCTTATGAGAACATGGAGAGAATTGGAGCTCATCCCAACCGTGA
GGGAGTCCCACCCCCACCCCGTCTGGAGATTTATGTCGAGAAGGATTGGGAGATATATGATGAGGAACACCCGGAGAACA
TGACAGTCCAGCGGTATTTGGTTAATCTTGGAGGTATGGAGGAGGATAATCCTTTCCTGATGGTGCTCAAGTATCAAGAT
GAGCCTACGCAACCCACTTCCTCTGTGCGCGTGTTCAGGCTAAGCGAGGTTGATGAACCTGACGCTCCAGAGTACCCTGA
GGATGTGGAGCCCCGTCTCCACTGGCATGAGCTAGATCCCAGCTCCAAGTCGGACCATGAGTTTTTCCTTGAGGCCAAGC
TCATATTCATTGGGCGTGGTTGCTCCAGGATCTTCAATGCCAGTGATTTTGAGGATCTCGACGACAAGTTCCGCACCGGA
GTGTCCATTTTCTTCTACGACGACCGTGGCGTCGAGGACCAAGAATGCTTCCTGCGTGGTGACATGGGAAGATTCACTCT
GCCGGAGGCCCAAGTTGAGCCGTGGCCGCCGGTCGGCAGCCAAGCAATCGGGCCACGGTCGCGCAAGTTCCCTCCTACCT
GGTGGATTCACTGATATGTTGACCCAGATTGGGGACTGAACATTATTCCCTCTCTGCAACTTAGTCCTCTGCTTCCATTG
AGTAGGCCACTAGGGCA-------ACAGAGATAACGTGCTGCAAACTGTTATACTAGCAGGCAAAAGACCGCGCCCATGG
GAAAGCCAGTGTGAGTGGCTGTTGCTGCTCTAGTTAAGAAAATGGAATGGGAAACGGGAGGCACCAGCAGATCGAAAAAC
AGTTTTGGCTGGGGGGCTGTTTTCATGTGTGTCCTCGTATGTTGTTTTGTTGCAGGCAATGGGCTGAACCATTTGTTGGA
TACTGATCTATACATTGTTCATTTGTAACTAAACCTTTTTTGGATCAATGCAAGCTTCCAATTCGGGTTTGTTTGCGGTT
GGTAACAGTTGGTGCTTGTACATGAAACGCTCAGCTGCGAATGAATAGGCATGCATCGTTATTTTGGTTGGAGATGTCAT
AACTGTTATATATGCAGCTCATACATTAGACATGAGAACAGAGTTGTAGCCAAAACTGTGGGCGCCAAAATTCTTTTTAG
CACATACGTACGCCAGAACTTGTGGCTGTTTCTATCCTTCGATGGATCATGCAGTTGGAGTTTTGGAGCCTATTGTTCCT
TTGTTTTCTCTTTTGTGGAAATCTTGTTTGTGTGCGGGTGTATGGCAGTACTGTCAATCCTTCCGTGGCTTCAAAAGCAG
TTCTTCGTTCTCTTCTTGGCGATTCTTCCATGTGGCCTCTGATGCAGAGCTAATCGGTTAGAATAATTCGCAAAAATGGC
TAGAATGATTCGCAAAAACTATATGAGTTTGATTGATACAGTCTACTTTGGTTAAAAGTTCAAAGGCATGGGCTGAAGTT
GCTTGCCTTTTG--------------------------------------------------------------------
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-----------------------------TTTTTCTGGCTGAACATTATTCCCTCTCTGTAGCTTATTTCTCTGCTTTCA
TTCACTAGGCCACTAGGGCAACTACAAACACACAGAGATAACGTGCTGCAAACTGTTATATGTATGGATACAGAACGAAC
TAATCTAAATAAGTATGCGCCTCATCTGCACGCTCCCCTAAAAACGTATCCCCTTGTTGCACAATGCAAATCCTCTGTGG
ACATTGACAGTGCGTTAGTCCAAGAATTCACATAATAATGACTAAGAAAAACTTGTGTATTTTCGTCCCATAACAAGATA
ACTCTGTTCAGTTTCAGAGAAAAAGAACTTTGTGTACAGACCTC--------------GCGATGAGTGGTAGTTCGCTTC
TTAGGACATCTCCAACGTGGACCGTTAAAATTGACATACTATTATTCGTCCACGGACTGGTCTGGACCAGTCTGTGGACG
CTGATACGGGAGCCGGTCATCAAATCCTGTCCTCTAAGTGTCCACTATTTTTTTCTAGTTCCACAACACTCAGAATAATT
ATAAAATAACAC-AATTCATTCATAAATTACAAAGCGAATATCCTAGTACA
>chr1D_415
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--------------GGAGGAGAAGGAGGAGGAGGCCATGTCGATGAGCATCAGGGAAGTGGAGGAGAGTGCACGACCATG
GTGACGAGCGTCGAGGGAGAAAGAAGTGCA---GCCATGTCGGCGCGCATCGGGAAGAGAGGATTAGCGAGAGCAGGAAG
AAGATAAGAGGAGGGAAGGGATATGCGTGGGCCCGCAAGGACGGGTGGCGCCTTGTCGTTGGTGGGTGCGCGTGGCGTAT
GAGAGCGA--TCCACGCGACCGACGCAAAGTTCGTATGGCGTGCCAGATGTAAACGTTTTCCATATAGAAACACATGGAC
TTTGGCGGAATTAACACAAAGTTAGAGGGCTAAATCAATAAATAGCCGAATGGATAAGAATCCCCAATCTTTCTCCCGTG
TGTCCTGAGGAAAAGACGGCCGCTGCCGGCCGGGAGGGCCTGCTCGCCGTGCGCCAGAGGCCGCTGATGTGGTCGTCTCG
TGCCGCGCGCCCTGCTCCGGCGAGAGGGATCGGGCGCGTGTGATT------CGGCGGCGCCGGCCGGGACGAAGCCGCTG
CAGCCGGCGTCTTGGTCCAGTGCGGGAGTGAAGCCAGGCGATGCCTTCC----------------TCCGTCGTCCAGCGT
CCAGGCAAGATTCTGTTCGTGTAGCCATGCGCCTCGAGTCTCCGATTCATTTCTTCTTCCCCTC-----TTGATTTTCCT
GTTTTGGATTTTTTTTTTTTGAAACCCTC----TCTTGGAGTTTA--------GAAGGGAAAGCAAGTGATTGAACAGTT
GTCTCATTAATTGTGATTAGACGGCGCTTACAAGAGGTGGTTGCCGCAACCGACATTAACCCTACCTAATTAATTACTCC
AGTA----TAGTTCCTAACAGAATGGAAGCAAAAAGAGAAGTCCAGTTCGAATCGACCGAATTCGTTTCCCTCCCCTCAC
A-----TCCCCTCCCGGCTCCTGGCCAGGCCAGCAG---------CCCGCCCCGTCTCTTCCCTATATATTCTGACACCC
ATCCTGCCTCGCGGGCCTCGTGAGAAAGGGGTCGCGGCCGAGTTGGAGATGGATCCAGAAGAGGGGAGCAAGCGCGCTCG
TTCGGCTGATGATGTGAGTCTTCCTCCTCTCTTCTCTCTTTCTAGGAGCGTCTCATTCGAATTCTCTAGGAGGAGCGAGA
GCGAGCGTCTCATTCGAATT---------------------CGAGCGTCTGATCCGAATTCTCTAGGAGCGAGAGCGAG-
-----CGTCTGATTCCAGTTATTTGCTGATCCAAATACTTGTACGAGCACCGGATTCGAATTATTTGCTGACCCAAATAC
TTGTGCGAGCCATCGGATTCGAATTATT----TGCTGATCCAAATACTTGTACAAGCATCGGGTTCGAGTTT--------
--------------------------------------ATTTGCTGATGATCCAAATACTTGTACGAGCATCGGATTCGA
ATTTATTTGCTGATGATCCAAATACTTGTGCGAGCAACGGATTCGAATTTATTCGCTGATCCAAATACTTGTACGAGCAT
CTGATTCGAATTATTTCCTGTCCCAAATA------CTTCGTACGAGCATCTGATTCGAATTATTTGCTGATTTCTGATCC
ATATACTACTACTATTTGCTTGGTGCAGAGCACGGACACCGTCGGCCTCACAGCGGGATGGGCAGACATTCCCCGCGAGC
TGCTTCCCGTTGTGCTCTCCCGCCTGCCATGTCCGGTAGATCGTCTCCGTTTCTCCGTGGTCAACAAGAAATGGCACGGG
TTCATCAAACAACACCCTCCTCG------TCTTCCTCCACTGCTCCCGTCCTTGGTGCTACCGG---CTTCTCCAGAGCA
CCCTCTGGTCCACGTAACACAGGGAGGGAACACCCGGCGCCTCGGACTCCCACCAGACATCAAGCAGAGAGCAAGTTTCT
GTGGATCCTACGAAGGGGGGTGGTTCGTCCTCGCTCTTGATAAACCACTGGAGAACAGGCTGTTCAACATATTCTCCGGC
GTCAGCATTCCGATGCCAACGACGACAATGGTGGACGGGGATGCACGATATATCCGAGTTGAGGCAGCTGCTCTATCAGG
GTCGCCAGTTCTGGACCCACCATACAACTACACCATCGGCGCGATTGCAAGGATCGAGGGCAGTGAGTTATCTGGCATTG
CACTATGGGACCCGTCCAAGGAGCACTGGACGGGCATTGACTGGGATCTCATCCGATCGCAGAGTCTGGATATACACGAT
GTGGTATACTCCAATGGCAGCTTTTACTTCCTCAACTCTTATGAGAACATGGAGAGAATTGGAGCTCATCCCAACCGTGA
GGGAGTCCCACC------CCGTCTGGAGATTTATGTCGAGAAGGATTGGGAGATATATGATGAGGAACACCCGGAGAACT
TGACAGTCCAGCGGTATTTGGTTAATCTTGGAGGTATGGAGGAGGATAATCCTTTCCTCATGGTGCTCAAGTATCAAGAT
GAGCCTACGCAGCCCACTTCCTCTGTGCGCGTGTTCAGGCTAAGCGAGGTTGATGAACCTGACGGTCCAGAGTACCCTGA
GGATGTGGAGCCCCGTCTCCACTGGCATGAGCTAGATCCCAGCTCCAAGTCGGACCATGAGTTTTTCCTTCAGGCCAAGC
TCATATTCATTGGGCGTGGTTGCTCCAGGATCTTCAATGCCAGTGATTTTGAGGATCTCGACGACAAGTTTCGCACTGGA
GTGTCCATTTTCTTCTACGACGACCGTGGCGTCGAGGACCAAGAATGCTTCCTGCGTGGTGACATGGGAAGGTTCACTCT
GCCGGAGGCCCAAGTTGAGCCGTGGCCGCCGGTCGGCAGCCAAGCAATCGGGCCACGGTCGCGCAAGTTCCCTCCTACGG
GGTGGATTCACTGATATGTTGACCCAGATTGGGGACTGAACATTATTCCCTCTCTGCAACTTAGTCCTCTGCTTCCATTG
AGTAGGCCACTAGGGCACACAAAAACATAGATAACGTGCTGCAAACTGTTCTACTAGCAGGCAAAAGACCGCGCCCATGG
GTAAGCCAGTGTGAGTGGGTGTTGCTGCTCTAGTTAAGAAAATGGAATGGGGAACGGGAGGCACCAGTAGATCGAAAAAC
AGTTTTGGCTGGGGGGCTGC-TTCATGTGTGTCCTCGTATGTTGTTTTGTTGCAGGTAATGGGCTGAACCATTTGTTGGA
TACTGATCTATACATTGTTCATTTGTAACTAAACCTTTTCTGGATCAATGCAAACTTCCAATTCGGGTTTGTTTGCAGTT
GGTAACAGTTGGTGCTTGTACATGTAACGCTCAGCTGTGAATGAATAGGCATGCATTGTTATTTTGGTTGGAGATGTCAT
AACTCTTA------------------------------------------------------------------------
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>chr1B_1535
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------------------------------------------------------------------------GAGCGAGA
GCGAGCGTCTGATCCGAATTCTCTAGGAGCGAGAGCGAGAGCGAGCGTCTGATCCGAATTCTCTAGGAGCGAGAGCGAGA
GCGAGCGTCTGATTCCAGTTATTTGCTGATCCAAATACTTGTACGAGCACCGGATTCGAATTATTTGCTGACCCAAATAT
TTGTACGAG-CATCGGATTCGAATTTATTTGCTGATGATCCAAATACTTGTACGAGCATCGGATTCGAATTTATTTGCTG
ATGATCCAAATACTTGTGCGAGCATCGGATTCGAATTTATTTGCTGATGATCCAAATACTTGTACGAGCATCGGATTCCA
ATTTATTTGCTGATGATCCAAATACTTGTGCGAGCATCGGATTCGAATTTATTCGCTGATCCAAATACTTGTACGAGCAT
CTGATTCGAATTATTTCCTGTCCCAAATAGGAGTACTTCGTACGAGCATCTGGTTCGAATTATTTGCTGATTTCTGATCC
ATA---TACTACTATTTGCTTGGTGCAGAGCACGGACACCGTCGGCCTCACAGCGGGATGGGCAGACATTCCCCGCGAGC
TGCTTCCAGTTGTGCTCTCCCGCCTGCCATGTCCGGTAGATCGTCTCCGGTTCTCCGTCGTCAACAAGAAATGGCACGGG
TTCTTGGAACAACACCGTCGTGATCTCCATCTTCCTCCACTACTCCCGTCATTGGTGCTACCGTCGTCTTCTCCAGAGCA
CCCTCTGGTCCACGTAACACAGGGAGGGAACACCCGGCGCCTCGGACTCCCACCAGACATCAAGCAGAGAGCAAGTTTCT
GTGGATCCTACCAAGGGGGGTGGTTCGTCCTCGCTCTTGATGGACCACTGGACAACAGACTGTTCAACATATTCTCCGGC
GTCAGCATTCCGATGCCAACGACGACAATGGTGGACGGGCGTGCACGATATATCCGAGTTGAGGCAGCAGCTCTCTCAGG
GTCGCCAGTTCTGGACCCACCATACAACTACACCATCGGCGCGATTGCAAGGATCCAGGGCAATGACTTCTCTGGCATTG
CACTATGGGACCCGTCCAAGGAGCACTGGACGTGCATTGACTGGGATCTCATCCCAACGCACAGTCTGGATATACACGAT
GTGGTATACTCCAATGGCAGCTTTTACTTCCTCAACTCTTATGAGAACATGGAGAGAATTGGAGCTCATCCCAACCGTGA
GGGAGTCCCACCCCCACCCCGTCTGGAGATTTATGTCGAGAAGGATTGGGAGATATATGATGAGGAACACCCGGAGAACA
TGACAGTCCAGCGGTATTTGGTTAATCTTGGAGGTATGGAGGAGGATAATCCTTTCCTGATGGTGCTCAAGTATCAAGAT
GAGCCTACGCAACCCACTTCCTCTGTGCGCGTGTTCAGGCTAAGCGAGGTTGATGAACCTGACGCTCCAGAGTACCCTGA
GGATGTGGAGCCCCGTCTCCACTGGCATGAGCTAGATCCCAGCTCCAAGTCGGACCATGAGTTTTTCCTTGAGGCCAAGC
TCATATTCATTGGGCGTGGTTGCTCCAGGATCTTCAATGCCAGTGATTTTGAGGATCTCGACGACAAGTTCCGCACCGGA
GTGTCCATTTTCTTCTACGACGACCGTGGCGTCGAGGACCAAGAATGCTTCCTGCGTGGTGACATGGGAAGATTCACTCT
GCCGGAGGCCCAAGTTGAGCCGTGGCCGCCGGTCGGCAGCCAAGCAATCGGGCCACGGTCGCGCAAGTTCCCTCCTACCT
GGTGGATTCACTGATATGTTGACCCAGATTGGGGACTGAACATTATTCCCTCTCTGCAACTTAGTCCTCTGCTTCCATTG
AGTAGGCCACTAGGGCA-------ACAGAGATAACGTGCTGCAAACTGTTATACTAGCAGGCAAAAGACCGCGCCCATGG
GAAAGCCAGTGTGAGTGGCTGTTGCTGCTCTAGTTAAGAAAATGGAATGGGAAACGGGAGGCACCAGCAGATCGAAAAAC
AGTTTTGGCTGGGGGGCTGTTTTCATGTGTGTCCTCGTATGTTGTTTTGTTGCAGGCAATGGGCTGAACCATTTGTTGGA
TACTGATCTATACATTGTTCATTTGTAACTAAACCTTTTTTGGATCAATGCAAGCTTCCAATTCGGGTTTGTTTGCGGTT
GGTAACAGTTGGTGCTTGTACATGAAACGCTCAGCTGCGAATGAATAGGCATGCATCGTTATTTTGGTTGGAGATGTCAT
AACTGTTATATATGCAGCTCATACATTAGACATGAGAACAGAGTTGTAGCCAAAACTGTGGGCGCCAAAATTCTTTTTAG
CACATACGTACGCCAGAACTTGTGGCTGTTTCTATCCTTCGATGGATCATGCAGTTGGAGTTTTGGAGCCTATTGTTCCT
TTGTTTTCTCTTTTGTGGAAATCTTGTTTGTGTGCGGGTGTATGGCAGTACTGTCAATCCTTCCGTGGCTTCAAAAGCAG
TTCTTCGTTCTCTTCTTGGCGATTCTTCCATGTGGCCTCTGATGCAGAGCTAATCGGTTAGAATAATTCGCAAAAATGGC
TAGAATGATTCGCAAAAACTATATGAGTTTGATTGATACAGTCTACTTTGGTTAAAAGTTCAAAGGCATGGGCTGAAGTT
GCTTGCCTTTTG--------------------------------------------------------------------
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-----------------------------TTTTTCTGGCTGAACATTATTCCCTCTCTGTAGCTTATTTCTCTGCTTTCA
TTCACTAGGCCACTAGGGCAAC----------------------------------------------------------
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>chr1D_3334
AAATGGCTAGA---------------------------------------------------------------------
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---AATGATTCGCAAAAACTGTATGAGTTCGATTAACAGAGTGTACTTTGGTTAAAAGTTCAAAGGCATGGGCTGAAGTT
ACCTATCTCTTTTTTTCTTTTTTAGAACGAAGGCTCAAGGGGAGCCCGACTTTGAATTAACAAAGCCATCAACCGGCCAG
GATTACACAAGGCCACCAAGCAAGAGCGACCGAAAGATACAAGGGAGCTGACAGAGCAGTTTACAACGCAACGCACACTA
CTGCACACATAGATATACACCTGAGAGCTCTGCAAGTAATGTCGAAGCCCATAGCACATCGGCACCAAGAGGCAGGGAGC
AGAGTAGCGTCAAGGATCAGCCAAAGGCCAGCAAGAACTGCGCGCAGCCAGTTCGTGGGTTGGGAACACGAAACCTGTCT
TCCAACGCCGAAGAGGACCCCAATCCTCTCACCTAGGCTCGAAGGCGCCGCACCGTCGGGTCGTTGGGCGCTCACCCGAG
AGCAAGAGCAGGTGTCGGTCGGAACCCAGAGCAGGCAAATCACACCGTCCTCACCACGTCGAAGGCACACCACTAGCTGC
ACTGGCACCTGCCCGGGGTCACCGAGAGCAGAAGGAAAACCACTAGGAGGATTGGCGAAGAACAAGCTGCAAGGACCCAA
GGTCGAAGCTTGGGAAGCCTCTACTTGGACTCGCAGCCGACGAGCACACTCCTATCTCGGCACCACTCACCCGAAGAACC
AGACAAACCAAGGCGGCGCCTCCAAGGAGGGAACGACGTGCAGGACGCCGCCACCGCCCAACCCGAGACGAGTTTTGGGC
TTTCACCCGGGATCTGGGACGGGGATGGATTCGGGAGACCTCCGCGGTGCCTCAAAGGAAGAAAGGCGATGCGCGCACGC
ACCCTCACCGCCGTGGTCGGAGATCCGACCAAGGGTTTCCCCCGGACTCGAGATATGCCACCGGCACCCTGCCAGCACCA
GAACTGGCAGCAAAAGCTGCAGATCGGACACAGCCGGAGGGGAGGAGTGAGCAGAGGAGGAGGAGGAGCTCGACCTTCAG
ATCTGGAGCGGAGGGACCGCGCCACGACCACCACCCGCCGGATCCGCGCCGCCCGAGCAGCCGACGACTCCGGCCGTCAC
ATCCCGCGCACGCCGCCTGTCGCAGAGGCTGCGCCGCCTCGCCGTCCGGGGCCGCCGCCCCGGTGTCCGGGGTCCTTCGC
GCGGGAACGAAGCGACGAGAGGCCTCGCCGCCACCTTCATCGGCAGCCGCCGGGGCTTGCCAGGCGTCCCTCAGGTGGCG
GCGAGGGGAGGGGATGTAGGGGGGGTGGCGGCGGCGGGGGGAAACCCTAGTCGCCCCCGGGTCGCCCGCTGGGGACGACA
CGGGAGCCGGACGACAATGGTCATCTCTTTTTTTCTCGCTGAACATTATTCCCTCTCTGCAGCTTATTTCTCTGTTTTCA
TTCACTAGGCCACTAGGGCAACTACAAA-ACACAGAGATAACGTGCTGCAAACTGTTATATGTATGGCTATAGAATGAAC
TAATCTGAATATGTATGCGCCTCACCCGCACGCTCCCCTAAAAACGTATCCCCTTGTTGCACAATGCAAATCCTCTGTGG
ACATAGACAGTGCGTTAGTCCAAGAATTCACATAATAATGACTACGAAAAAATTGCATATCATCGTTCCTTTACAATATA
ACTATGTTCAGTTTCAGAGAAAAAGAACTTTGTGTACAGGCCTGCTCAGAGCCAGTGGGCGATGAGTGGTAGTTCGCTTC
TCAGGACATCTCCAGCGCGGACTGTTAAAACTGACATACTACTATTTG---------TGGTCTGAACCAGTCTACGGATA
CTGATACAGGAGCCGGTCACCAAATCCTGTCCTCTAAGTGTCTGTTTTTTTTTTCTAGTTCCACAACACTCAAAATAATT
ATAAAAATAGCAGAATTCATTCATAAATAACAAAGCGAATATCCTAGTACA
>SNPs
-SSSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS-------S------------S----SS--S-------S--------------------S-SS----
-S--------------S------S--SSSSSSS-------------------S-S-------------S----S-S----
------S----S---S------------------S----------S------SS-S------------S---------SS
-S-S-S-SSS--S--S----------S-----S---SS---------------------------------S--------
--------SS-------------------------------------S-----------------S--------------
-----S----------S-S---S--------------S---------------------------------S-S---S--
--S-------------------------S----------------SSSSSS--------S----S---------------
---------------------------------------------SSSSSSSSSSSSSSSSSSSS---------------
-----------------S---------------------------------------S------SSSSS-----------
S------SS------S-------------SSSS------------SSSSSSSS--------------------S---S--
------------------------------------------------------------------S-------------
----SSSS------------------------------------------------S---------------------S-
SSSSSS------------------S----------SSSSSSSSSS----S------S-------------------S---
------------------------------------------------------------------------------S-
-S-------------------------------SSSSS--SS--------------------------------------
--------------------------------------------------------------------------------
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----------------------------S--------------------------------------S--S----S----
------S----S------------S-S-----------------------------------------------------
----S---------------------------------------S------S---SS---SS----S--S-S----S---
---S-----------------------------------S---S------------------------------------
-S------------S--S----S-------S----------S----S-SSSSSSSSS-------S--------SS---SS
-------S-----------S----------------------SSS-S-------------------------S-------
------SS-SSS----------------S----------------------
>forward_441
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GAGGAGGAGGAGGTCATGGT---------------------------------------
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---------------------------------------------------
>reverse_1522
--------------------------------------------------------------------------------
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-GCGGCTGATGATGTGAGTCT-----------------------------------------------------------
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---------------------------------------------------
>forward_476
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--------------------------------------------------------AGTGGAGGAGAGTGCATGGA----
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---------------------------------------------------
>reverse_1555
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------CTCTTTCTAGGAGCGAGAGCG-------------------------
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---------------------------------------------------
>forward_1109
--------------------------------------------------------------------------------
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-------------------------------------------------TTTCTTCTCCCCCTCCCCTC-----------
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---------------------------------------------------
>reverse_5629
--------------------------------------------------------------------------------
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----------------------------CACACAGAGATAACGTGCTGC-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
