Multiple sequence alignment - TraesCS1B01G298800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G298800 chr1B 100.000 2435 0 0 1 2435 520278198 520275764 0.000000e+00 4497.0
1 TraesCS1B01G298800 chr1B 94.024 502 24 5 1 501 659301237 659301733 0.000000e+00 756.0
2 TraesCS1B01G298800 chr1B 77.984 972 96 48 670 1577 520145565 520144648 3.610000e-138 501.0
3 TraesCS1B01G298800 chr1B 87.879 264 26 4 1063 1326 520243099 520242842 3.040000e-79 305.0
4 TraesCS1B01G298800 chr1B 83.333 348 24 21 1869 2187 520144660 520144318 8.520000e-75 291.0
5 TraesCS1B01G298800 chr1B 81.783 258 24 13 1869 2112 520242511 520242263 6.870000e-46 195.0
6 TraesCS1B01G298800 chr1B 94.937 79 3 1 1502 1579 520242575 520242497 3.290000e-24 122.0
7 TraesCS1B01G298800 chr1D 86.646 981 52 26 619 1579 386787419 386786498 0.000000e+00 1013.0
8 TraesCS1B01G298800 chr1D 91.034 580 37 12 1870 2435 386786511 386785933 0.000000e+00 769.0
9 TraesCS1B01G298800 chr1D 81.173 972 97 36 561 1498 386750531 386749612 0.000000e+00 702.0
10 TraesCS1B01G298800 chr1D 82.162 370 36 16 1868 2219 386749520 386749163 8.520000e-75 291.0
11 TraesCS1B01G298800 chr1D 91.525 118 7 1 503 617 386787814 386787697 2.510000e-35 159.0
12 TraesCS1B01G298800 chr1D 83.871 124 4 6 586 709 386788037 386787930 1.190000e-18 104.0
13 TraesCS1B01G298800 chr1D 91.781 73 6 0 1505 1577 386749579 386749507 4.280000e-18 102.0
14 TraesCS1B01G298800 chr1A 89.691 679 29 14 925 1579 486598611 486597950 0.000000e+00 828.0
15 TraesCS1B01G298800 chr1A 91.552 509 32 9 1 507 514086801 514087300 0.000000e+00 691.0
16 TraesCS1B01G298800 chr1A 79.727 952 87 47 581 1498 486581781 486580902 2.080000e-165 592.0
17 TraesCS1B01G298800 chr1A 98.294 293 5 0 1572 1864 155839647 155839355 4.640000e-142 514.0
18 TraesCS1B01G298800 chr1A 98.625 291 3 1 1574 1864 582700410 582700699 4.640000e-142 514.0
19 TraesCS1B01G298800 chr1A 98.621 290 3 1 1575 1864 147686112 147686400 1.670000e-141 512.0
20 TraesCS1B01G298800 chr1A 87.841 403 32 10 1868 2254 486597965 486597564 7.940000e-125 457.0
21 TraesCS1B01G298800 chr1A 89.963 269 19 5 502 767 486598972 486598709 8.340000e-90 340.0
22 TraesCS1B01G298800 chr1A 92.481 133 8 2 2305 2435 486597569 486597437 3.200000e-44 189.0
23 TraesCS1B01G298800 chr1A 94.915 59 2 1 1522 1579 486580844 486580786 9.270000e-15 91.6
24 TraesCS1B01G298800 chr5B 93.509 493 23 6 1 491 697092519 697093004 0.000000e+00 725.0
25 TraesCS1B01G298800 chr5B 94.017 468 23 2 1 467 463973195 463972732 0.000000e+00 704.0
26 TraesCS1B01G298800 chr5B 91.913 507 33 6 1 503 163050707 163050205 0.000000e+00 702.0
27 TraesCS1B01G298800 chr2B 92.857 504 29 5 1 502 17531420 17530922 0.000000e+00 725.0
28 TraesCS1B01G298800 chr2B 96.907 291 9 0 1574 1864 5544241 5543951 2.810000e-134 488.0
29 TraesCS1B01G298800 chr2B 96.875 288 8 1 1577 1864 666779587 666779301 4.710000e-132 481.0
30 TraesCS1B01G298800 chr2B 93.443 61 3 1 445 504 493857559 493857619 3.330000e-14 89.8
31 TraesCS1B01G298800 chr5A 92.188 512 30 7 1 508 564643054 564642549 0.000000e+00 715.0
32 TraesCS1B01G298800 chrUn 92.415 501 31 5 1 499 178230480 178229985 0.000000e+00 708.0
33 TraesCS1B01G298800 chr7B 92.048 503 33 5 1 501 588497828 588498325 0.000000e+00 701.0
34 TraesCS1B01G298800 chr7B 98.288 292 4 1 1573 1864 220291129 220291419 6.010000e-141 510.0
35 TraesCS1B01G298800 chr7B 97.945 292 4 1 1573 1864 13310969 13311258 2.790000e-139 505.0
36 TraesCS1B01G298800 chr7A 98.973 292 2 1 1573 1864 672060034 672060324 2.770000e-144 521.0
37 TraesCS1B01G298800 chr3B 98.282 291 4 1 1574 1864 464618612 464618323 2.160000e-140 508.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G298800 chr1B 520275764 520278198 2434 True 4497.000000 4497 100.000000 1 2435 1 chr1B.!!$R1 2434
1 TraesCS1B01G298800 chr1B 520144318 520145565 1247 True 396.000000 501 80.658500 670 2187 2 chr1B.!!$R2 1517
2 TraesCS1B01G298800 chr1B 520242263 520243099 836 True 207.333333 305 88.199667 1063 2112 3 chr1B.!!$R3 1049
3 TraesCS1B01G298800 chr1D 386785933 386788037 2104 True 511.250000 1013 88.269000 503 2435 4 chr1D.!!$R2 1932
4 TraesCS1B01G298800 chr1D 386749163 386750531 1368 True 365.000000 702 85.038667 561 2219 3 chr1D.!!$R1 1658
5 TraesCS1B01G298800 chr1A 486597437 486598972 1535 True 453.500000 828 89.994000 502 2435 4 chr1A.!!$R3 1933
6 TraesCS1B01G298800 chr1A 486580786 486581781 995 True 341.800000 592 87.321000 581 1579 2 chr1A.!!$R2 998
7 TraesCS1B01G298800 chr5B 163050205 163050707 502 True 702.000000 702 91.913000 1 503 1 chr5B.!!$R1 502
8 TraesCS1B01G298800 chr5A 564642549 564643054 505 True 715.000000 715 92.188000 1 508 1 chr5A.!!$R1 507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
492 493 0.109723 TCGGGGAGTCCACCTTTTTG 59.89 55.0 12.3 0.0 34.36 2.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1725 2315 0.105593 ATCATCGATGACGCCAAGCT 59.894 50.0 29.49 9.12 40.03 3.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 0.538746 ACACATTCGGGTTGGGGTTC 60.539 55.000 0.00 0.00 0.00 3.62
166 167 2.578713 CGGATCCGTTCGTGGTCG 60.579 66.667 26.35 0.00 34.99 4.79
168 169 2.181021 GATCCGTTCGTGGTCGCT 59.819 61.111 0.00 0.00 36.96 4.93
169 170 1.430632 GATCCGTTCGTGGTCGCTA 59.569 57.895 0.00 0.00 36.96 4.26
170 171 0.864797 GATCCGTTCGTGGTCGCTAC 60.865 60.000 0.00 0.00 36.96 3.58
173 174 1.208358 CGTTCGTGGTCGCTACTCA 59.792 57.895 0.00 0.00 36.96 3.41
174 175 1.063951 CGTTCGTGGTCGCTACTCAC 61.064 60.000 0.00 0.00 36.96 3.51
175 176 0.240411 GTTCGTGGTCGCTACTCACT 59.760 55.000 7.87 0.00 36.96 3.41
176 177 0.520404 TTCGTGGTCGCTACTCACTC 59.480 55.000 7.87 0.00 36.96 3.51
177 178 1.136984 CGTGGTCGCTACTCACTCC 59.863 63.158 7.87 0.00 0.00 3.85
178 179 1.136984 GTGGTCGCTACTCACTCCG 59.863 63.158 3.71 0.00 0.00 4.63
179 180 1.002990 TGGTCGCTACTCACTCCGA 60.003 57.895 0.00 0.00 0.00 4.55
181 182 1.060622 GTCGCTACTCACTCCGACG 59.939 63.158 0.00 0.00 40.27 5.12
182 183 2.104859 TCGCTACTCACTCCGACGG 61.105 63.158 7.84 7.84 0.00 4.79
183 184 2.104859 CGCTACTCACTCCGACGGA 61.105 63.158 17.28 17.28 0.00 4.69
191 192 3.522731 CTCCGACGGAGGCCAGAG 61.523 72.222 32.26 9.25 45.43 3.35
192 193 3.997400 CTCCGACGGAGGCCAGAGA 62.997 68.421 32.26 0.78 45.43 3.10
194 195 4.200283 CGACGGAGGCCAGAGAGC 62.200 72.222 5.01 0.00 0.00 4.09
195 196 3.071206 GACGGAGGCCAGAGAGCA 61.071 66.667 5.01 0.00 0.00 4.26
196 197 2.364842 ACGGAGGCCAGAGAGCAT 60.365 61.111 5.01 0.00 0.00 3.79
197 198 1.965754 GACGGAGGCCAGAGAGCATT 61.966 60.000 5.01 0.00 0.00 3.56
199 200 1.094073 CGGAGGCCAGAGAGCATTTG 61.094 60.000 5.01 0.00 0.00 2.32
200 201 0.750911 GGAGGCCAGAGAGCATTTGG 60.751 60.000 5.01 0.00 35.06 3.28
202 203 0.407139 AGGCCAGAGAGCATTTGGTT 59.593 50.000 5.01 0.00 34.43 3.67
204 205 1.745653 GGCCAGAGAGCATTTGGTTAC 59.254 52.381 0.00 0.00 34.43 2.50
205 206 2.619074 GGCCAGAGAGCATTTGGTTACT 60.619 50.000 0.00 0.00 34.43 2.24
207 208 3.012518 CCAGAGAGCATTTGGTTACTGG 58.987 50.000 15.88 15.88 40.04 4.00
208 209 3.307691 CCAGAGAGCATTTGGTTACTGGA 60.308 47.826 20.82 0.00 44.04 3.86
209 210 4.521146 CAGAGAGCATTTGGTTACTGGAT 58.479 43.478 0.00 0.00 0.00 3.41
210 211 4.574013 CAGAGAGCATTTGGTTACTGGATC 59.426 45.833 0.00 0.00 0.00 3.36
211 212 4.472833 AGAGAGCATTTGGTTACTGGATCT 59.527 41.667 0.00 0.00 0.00 2.75
212 213 5.045286 AGAGAGCATTTGGTTACTGGATCTT 60.045 40.000 0.00 0.00 0.00 2.40
213 214 5.574188 AGAGCATTTGGTTACTGGATCTTT 58.426 37.500 0.00 0.00 0.00 2.52
214 215 5.649831 AGAGCATTTGGTTACTGGATCTTTC 59.350 40.000 0.00 0.00 0.00 2.62
217 218 2.396590 TGGTTACTGGATCTTTCCGC 57.603 50.000 0.00 0.00 45.89 5.54
218 219 1.906574 TGGTTACTGGATCTTTCCGCT 59.093 47.619 0.00 0.00 45.89 5.52
219 220 2.280628 GGTTACTGGATCTTTCCGCTG 58.719 52.381 0.00 0.00 45.89 5.18
221 222 0.830648 TACTGGATCTTTCCGCTGGG 59.169 55.000 0.00 0.00 45.89 4.45
222 223 0.909610 ACTGGATCTTTCCGCTGGGA 60.910 55.000 0.00 0.00 45.89 4.37
223 224 0.179062 CTGGATCTTTCCGCTGGGAG 60.179 60.000 0.00 0.00 45.89 4.30
227 228 0.471617 ATCTTTCCGCTGGGAGATGG 59.528 55.000 10.84 0.00 44.98 3.51
228 229 0.909610 TCTTTCCGCTGGGAGATGGT 60.910 55.000 0.00 0.00 44.98 3.55
229 230 0.830648 CTTTCCGCTGGGAGATGGTA 59.169 55.000 0.00 0.00 44.98 3.25
230 231 0.830648 TTTCCGCTGGGAGATGGTAG 59.169 55.000 0.00 0.00 44.98 3.18
231 232 1.686325 TTCCGCTGGGAGATGGTAGC 61.686 60.000 0.00 0.00 44.98 3.58
232 233 2.136878 CCGCTGGGAGATGGTAGCT 61.137 63.158 0.00 0.00 34.13 3.32
233 234 1.365633 CGCTGGGAGATGGTAGCTC 59.634 63.158 0.00 0.00 34.13 4.09
234 235 1.365633 GCTGGGAGATGGTAGCTCG 59.634 63.158 0.00 0.00 33.19 5.03
235 236 2.045280 CTGGGAGATGGTAGCTCGG 58.955 63.158 0.00 0.00 33.19 4.63
236 237 1.457643 TGGGAGATGGTAGCTCGGG 60.458 63.158 0.00 0.00 33.19 5.14
237 238 1.152525 GGGAGATGGTAGCTCGGGA 60.153 63.158 0.00 0.00 33.19 5.14
238 239 0.543174 GGGAGATGGTAGCTCGGGAT 60.543 60.000 0.00 0.00 33.19 3.85
239 240 1.272536 GGGAGATGGTAGCTCGGGATA 60.273 57.143 0.00 0.00 33.19 2.59
240 241 2.624557 GGGAGATGGTAGCTCGGGATAT 60.625 54.545 0.00 0.00 33.19 1.63
241 242 2.691011 GGAGATGGTAGCTCGGGATATC 59.309 54.545 0.00 0.00 33.19 1.63
242 243 3.626222 GGAGATGGTAGCTCGGGATATCT 60.626 52.174 2.05 0.00 33.19 1.98
243 244 4.020543 GAGATGGTAGCTCGGGATATCTT 58.979 47.826 2.05 0.00 0.00 2.40
244 245 4.020543 AGATGGTAGCTCGGGATATCTTC 58.979 47.826 2.05 0.00 0.00 2.87
245 246 3.238788 TGGTAGCTCGGGATATCTTCA 57.761 47.619 2.05 0.00 0.00 3.02
246 247 3.572642 TGGTAGCTCGGGATATCTTCAA 58.427 45.455 2.05 0.00 0.00 2.69
247 248 3.321111 TGGTAGCTCGGGATATCTTCAAC 59.679 47.826 2.05 0.00 0.00 3.18
248 249 3.306156 GGTAGCTCGGGATATCTTCAACC 60.306 52.174 2.05 0.00 0.00 3.77
249 250 1.341531 AGCTCGGGATATCTTCAACCG 59.658 52.381 10.16 10.16 45.52 4.44
250 251 1.605712 GCTCGGGATATCTTCAACCGG 60.606 57.143 14.77 0.00 44.36 5.28
251 252 1.687123 CTCGGGATATCTTCAACCGGT 59.313 52.381 0.00 0.00 44.36 5.28
252 253 2.102588 CTCGGGATATCTTCAACCGGTT 59.897 50.000 15.86 15.86 44.36 4.44
253 254 2.502538 TCGGGATATCTTCAACCGGTTT 59.497 45.455 19.55 5.23 44.36 3.27
254 255 2.612212 CGGGATATCTTCAACCGGTTTG 59.388 50.000 19.55 13.53 40.79 2.93
255 256 2.949644 GGGATATCTTCAACCGGTTTGG 59.050 50.000 19.55 7.84 46.41 3.28
256 257 3.371166 GGGATATCTTCAACCGGTTTGGA 60.371 47.826 19.55 15.86 42.00 3.53
257 258 4.461198 GGATATCTTCAACCGGTTTGGAT 58.539 43.478 19.55 21.16 42.00 3.41
258 259 4.275936 GGATATCTTCAACCGGTTTGGATG 59.724 45.833 19.55 14.79 41.73 3.51
259 260 2.940994 TCTTCAACCGGTTTGGATGA 57.059 45.000 19.55 16.82 46.81 2.92
261 262 2.921374 TCAACCGGTTTGGATGACG 58.079 52.632 19.55 3.62 43.94 4.35
262 263 0.604243 TCAACCGGTTTGGATGACGG 60.604 55.000 19.55 2.80 43.94 4.79
264 265 3.884900 CCGGTTTGGATGACGGTC 58.115 61.111 0.00 0.00 42.00 4.79
265 266 1.004320 CCGGTTTGGATGACGGTCA 60.004 57.895 14.01 14.01 42.00 4.02
266 267 0.392461 CCGGTTTGGATGACGGTCAT 60.392 55.000 22.84 22.84 42.00 3.06
267 268 0.726827 CGGTTTGGATGACGGTCATG 59.273 55.000 27.11 8.03 37.20 3.07
268 269 1.821216 GGTTTGGATGACGGTCATGT 58.179 50.000 27.11 6.13 37.20 3.21
269 270 2.675603 CGGTTTGGATGACGGTCATGTA 60.676 50.000 27.11 13.12 37.20 2.29
270 271 3.340034 GGTTTGGATGACGGTCATGTAA 58.660 45.455 27.11 17.74 37.20 2.41
271 272 3.945285 GGTTTGGATGACGGTCATGTAAT 59.055 43.478 27.11 4.51 37.20 1.89
272 273 5.120399 GGTTTGGATGACGGTCATGTAATA 58.880 41.667 27.11 6.86 37.20 0.98
273 274 5.236478 GGTTTGGATGACGGTCATGTAATAG 59.764 44.000 27.11 0.00 37.20 1.73
274 275 4.600692 TGGATGACGGTCATGTAATAGG 57.399 45.455 27.11 0.00 37.20 2.57
275 276 4.219919 TGGATGACGGTCATGTAATAGGA 58.780 43.478 27.11 0.00 37.20 2.94
276 277 4.838423 TGGATGACGGTCATGTAATAGGAT 59.162 41.667 27.11 0.56 37.20 3.24
277 278 6.014012 TGGATGACGGTCATGTAATAGGATA 58.986 40.000 27.11 0.00 37.20 2.59
278 279 6.152831 TGGATGACGGTCATGTAATAGGATAG 59.847 42.308 27.11 0.00 37.20 2.08
279 280 6.377429 GGATGACGGTCATGTAATAGGATAGA 59.623 42.308 27.11 0.00 37.20 1.98
280 281 6.570672 TGACGGTCATGTAATAGGATAGAC 57.429 41.667 6.76 0.00 0.00 2.59
281 282 6.066032 TGACGGTCATGTAATAGGATAGACA 58.934 40.000 6.76 0.00 0.00 3.41
282 283 6.719829 TGACGGTCATGTAATAGGATAGACAT 59.280 38.462 6.76 0.00 32.95 3.06
283 284 7.094334 TGACGGTCATGTAATAGGATAGACATC 60.094 40.741 6.76 0.00 31.03 3.06
284 285 6.948886 ACGGTCATGTAATAGGATAGACATCT 59.051 38.462 0.00 0.00 31.03 2.90
285 286 8.107729 ACGGTCATGTAATAGGATAGACATCTA 58.892 37.037 0.00 0.00 31.03 1.98
286 287 8.616942 CGGTCATGTAATAGGATAGACATCTAG 58.383 40.741 0.00 0.00 31.03 2.43
287 288 9.469097 GGTCATGTAATAGGATAGACATCTAGT 57.531 37.037 0.00 0.00 31.03 2.57
311 312 8.097662 AGTTTACTTATCTATTGATAGCCAGCC 58.902 37.037 0.00 0.00 36.62 4.85
312 313 5.078411 ACTTATCTATTGATAGCCAGCCG 57.922 43.478 0.00 0.00 36.62 5.52
313 314 4.081420 ACTTATCTATTGATAGCCAGCCGG 60.081 45.833 0.00 0.00 36.62 6.13
314 315 1.717032 TCTATTGATAGCCAGCCGGT 58.283 50.000 1.90 0.00 33.28 5.28
315 316 2.047061 TCTATTGATAGCCAGCCGGTT 58.953 47.619 1.90 0.00 33.28 4.44
316 317 2.146342 CTATTGATAGCCAGCCGGTTG 58.854 52.381 11.98 11.98 33.28 3.77
317 318 0.255890 ATTGATAGCCAGCCGGTTGT 59.744 50.000 17.69 1.85 33.28 3.32
318 319 0.676466 TTGATAGCCAGCCGGTTGTG 60.676 55.000 17.69 9.73 33.28 3.33
319 320 1.819632 GATAGCCAGCCGGTTGTGG 60.820 63.158 17.69 15.43 36.85 4.17
328 329 3.080647 CCGGTTGTGGCCTCTTATC 57.919 57.895 3.32 0.00 0.00 1.75
329 330 0.541863 CCGGTTGTGGCCTCTTATCT 59.458 55.000 3.32 0.00 0.00 1.98
330 331 1.065418 CCGGTTGTGGCCTCTTATCTT 60.065 52.381 3.32 0.00 0.00 2.40
331 332 2.009774 CGGTTGTGGCCTCTTATCTTG 58.990 52.381 3.32 0.00 0.00 3.02
332 333 2.369394 GGTTGTGGCCTCTTATCTTGG 58.631 52.381 3.32 0.00 0.00 3.61
333 334 1.745653 GTTGTGGCCTCTTATCTTGGC 59.254 52.381 3.32 0.00 45.42 4.52
334 335 1.289160 TGTGGCCTCTTATCTTGGCT 58.711 50.000 3.32 0.00 45.45 4.75
335 336 2.477245 TGTGGCCTCTTATCTTGGCTA 58.523 47.619 3.32 0.00 45.45 3.93
336 337 2.435805 TGTGGCCTCTTATCTTGGCTAG 59.564 50.000 3.32 0.00 45.45 3.42
337 338 2.436173 GTGGCCTCTTATCTTGGCTAGT 59.564 50.000 3.32 0.00 45.45 2.57
338 339 2.700897 TGGCCTCTTATCTTGGCTAGTC 59.299 50.000 3.32 0.00 45.45 2.59
339 340 2.288518 GGCCTCTTATCTTGGCTAGTCG 60.289 54.545 0.00 0.00 45.45 4.18
340 341 2.623889 GCCTCTTATCTTGGCTAGTCGA 59.376 50.000 0.00 0.00 43.05 4.20
341 342 3.257127 GCCTCTTATCTTGGCTAGTCGAT 59.743 47.826 0.00 0.00 43.05 3.59
342 343 4.804108 CCTCTTATCTTGGCTAGTCGATG 58.196 47.826 0.00 0.00 0.00 3.84
343 344 4.279671 CCTCTTATCTTGGCTAGTCGATGT 59.720 45.833 0.00 0.00 0.00 3.06
344 345 5.221342 CCTCTTATCTTGGCTAGTCGATGTT 60.221 44.000 0.00 0.00 0.00 2.71
345 346 6.222038 TCTTATCTTGGCTAGTCGATGTTT 57.778 37.500 0.00 0.00 0.00 2.83
346 347 6.273825 TCTTATCTTGGCTAGTCGATGTTTC 58.726 40.000 0.00 0.00 0.00 2.78
347 348 4.744795 ATCTTGGCTAGTCGATGTTTCT 57.255 40.909 0.00 0.00 0.00 2.52
348 349 5.854010 ATCTTGGCTAGTCGATGTTTCTA 57.146 39.130 0.00 0.00 0.00 2.10
349 350 5.250235 TCTTGGCTAGTCGATGTTTCTAG 57.750 43.478 3.31 3.31 35.60 2.43
352 353 2.745102 GCTAGTCGATGTTTCTAGCCC 58.255 52.381 17.04 0.00 46.04 5.19
353 354 2.362717 GCTAGTCGATGTTTCTAGCCCT 59.637 50.000 17.04 0.00 46.04 5.19
354 355 3.181474 GCTAGTCGATGTTTCTAGCCCTT 60.181 47.826 17.04 0.00 46.04 3.95
355 356 3.528597 AGTCGATGTTTCTAGCCCTTC 57.471 47.619 0.00 0.00 0.00 3.46
356 357 2.832129 AGTCGATGTTTCTAGCCCTTCA 59.168 45.455 0.00 0.00 0.00 3.02
357 358 3.452627 AGTCGATGTTTCTAGCCCTTCAT 59.547 43.478 0.00 0.00 0.00 2.57
358 359 3.557595 GTCGATGTTTCTAGCCCTTCATG 59.442 47.826 0.00 0.00 0.00 3.07
359 360 2.874701 CGATGTTTCTAGCCCTTCATGG 59.125 50.000 0.00 0.00 0.00 3.66
368 369 2.864114 CCCTTCATGGCTCTGTGTG 58.136 57.895 0.00 0.00 0.00 3.82
369 370 0.325933 CCCTTCATGGCTCTGTGTGA 59.674 55.000 0.00 0.00 0.00 3.58
370 371 1.678123 CCCTTCATGGCTCTGTGTGAG 60.678 57.143 0.00 0.00 45.33 3.51
371 372 1.002888 CCTTCATGGCTCTGTGTGAGT 59.997 52.381 0.00 0.00 44.41 3.41
372 373 2.551721 CCTTCATGGCTCTGTGTGAGTT 60.552 50.000 0.00 0.00 44.41 3.01
373 374 2.936919 TCATGGCTCTGTGTGAGTTT 57.063 45.000 0.00 0.00 44.41 2.66
374 375 3.213206 TCATGGCTCTGTGTGAGTTTT 57.787 42.857 0.00 0.00 44.41 2.43
375 376 3.141398 TCATGGCTCTGTGTGAGTTTTC 58.859 45.455 0.00 0.00 44.41 2.29
376 377 3.144506 CATGGCTCTGTGTGAGTTTTCT 58.855 45.455 0.00 0.00 44.41 2.52
377 378 3.281727 TGGCTCTGTGTGAGTTTTCTT 57.718 42.857 0.00 0.00 44.41 2.52
378 379 3.620488 TGGCTCTGTGTGAGTTTTCTTT 58.380 40.909 0.00 0.00 44.41 2.52
379 380 3.378112 TGGCTCTGTGTGAGTTTTCTTTG 59.622 43.478 0.00 0.00 44.41 2.77
380 381 3.366719 GCTCTGTGTGAGTTTTCTTTGC 58.633 45.455 0.00 0.00 44.41 3.68
381 382 3.065925 GCTCTGTGTGAGTTTTCTTTGCT 59.934 43.478 0.00 0.00 44.41 3.91
382 383 4.439289 GCTCTGTGTGAGTTTTCTTTGCTT 60.439 41.667 0.00 0.00 44.41 3.91
383 384 5.643379 TCTGTGTGAGTTTTCTTTGCTTT 57.357 34.783 0.00 0.00 0.00 3.51
384 385 6.024552 TCTGTGTGAGTTTTCTTTGCTTTT 57.975 33.333 0.00 0.00 0.00 2.27
385 386 6.454795 TCTGTGTGAGTTTTCTTTGCTTTTT 58.545 32.000 0.00 0.00 0.00 1.94
414 415 8.885494 TTTTTGAAGATATTGGAACCTTGTTG 57.115 30.769 0.00 0.00 0.00 3.33
415 416 7.831691 TTTGAAGATATTGGAACCTTGTTGA 57.168 32.000 0.00 0.00 0.00 3.18
416 417 6.817765 TGAAGATATTGGAACCTTGTTGAC 57.182 37.500 0.00 0.00 0.00 3.18
417 418 6.303054 TGAAGATATTGGAACCTTGTTGACA 58.697 36.000 0.00 0.00 0.00 3.58
418 419 6.206634 TGAAGATATTGGAACCTTGTTGACAC 59.793 38.462 0.00 0.00 0.00 3.67
419 420 5.880901 AGATATTGGAACCTTGTTGACACT 58.119 37.500 0.00 0.00 0.00 3.55
420 421 6.306987 AGATATTGGAACCTTGTTGACACTT 58.693 36.000 0.00 0.00 0.00 3.16
421 422 6.777580 AGATATTGGAACCTTGTTGACACTTT 59.222 34.615 0.00 0.00 0.00 2.66
422 423 4.712122 TTGGAACCTTGTTGACACTTTC 57.288 40.909 0.00 0.00 0.00 2.62
423 424 3.963129 TGGAACCTTGTTGACACTTTCT 58.037 40.909 0.00 0.00 0.00 2.52
424 425 4.340617 TGGAACCTTGTTGACACTTTCTT 58.659 39.130 0.00 0.00 0.00 2.52
425 426 4.770010 TGGAACCTTGTTGACACTTTCTTT 59.230 37.500 0.00 0.00 0.00 2.52
426 427 5.245075 TGGAACCTTGTTGACACTTTCTTTT 59.755 36.000 0.00 0.00 0.00 2.27
427 428 6.163476 GGAACCTTGTTGACACTTTCTTTTT 58.837 36.000 0.00 0.00 0.00 1.94
449 450 5.883503 TTGGTTAATAAGTAAGTTGGCCG 57.116 39.130 0.00 0.00 0.00 6.13
450 451 4.909001 TGGTTAATAAGTAAGTTGGCCGT 58.091 39.130 0.00 0.00 0.00 5.68
451 452 5.315348 TGGTTAATAAGTAAGTTGGCCGTT 58.685 37.500 0.00 0.00 0.00 4.44
452 453 5.769162 TGGTTAATAAGTAAGTTGGCCGTTT 59.231 36.000 0.00 0.00 0.00 3.60
453 454 6.088173 GGTTAATAAGTAAGTTGGCCGTTTG 58.912 40.000 0.00 0.00 0.00 2.93
454 455 3.842732 ATAAGTAAGTTGGCCGTTTGC 57.157 42.857 0.00 0.00 40.16 3.68
455 456 1.394618 AAGTAAGTTGGCCGTTTGCA 58.605 45.000 0.00 0.00 43.89 4.08
456 457 1.616159 AGTAAGTTGGCCGTTTGCAT 58.384 45.000 0.00 0.00 43.89 3.96
457 458 1.539827 AGTAAGTTGGCCGTTTGCATC 59.460 47.619 0.00 0.00 43.89 3.91
458 459 1.268352 GTAAGTTGGCCGTTTGCATCA 59.732 47.619 0.00 0.00 43.89 3.07
459 460 0.968405 AAGTTGGCCGTTTGCATCAT 59.032 45.000 0.00 0.00 43.89 2.45
460 461 0.968405 AGTTGGCCGTTTGCATCATT 59.032 45.000 0.00 0.00 43.89 2.57
461 462 1.067635 AGTTGGCCGTTTGCATCATTC 60.068 47.619 0.00 0.00 43.89 2.67
462 463 1.067635 GTTGGCCGTTTGCATCATTCT 60.068 47.619 0.00 0.00 43.89 2.40
463 464 0.527113 TGGCCGTTTGCATCATTCTG 59.473 50.000 0.00 0.00 43.89 3.02
464 465 0.810648 GGCCGTTTGCATCATTCTGA 59.189 50.000 0.00 0.00 43.89 3.27
465 466 1.406539 GGCCGTTTGCATCATTCTGAT 59.593 47.619 0.00 0.00 43.89 2.90
475 476 2.591571 TCATTCTGATGCAGAGGTCG 57.408 50.000 0.00 0.00 41.75 4.79
476 477 1.137675 TCATTCTGATGCAGAGGTCGG 59.862 52.381 0.00 0.00 41.75 4.79
477 478 0.467384 ATTCTGATGCAGAGGTCGGG 59.533 55.000 0.00 0.00 41.75 5.14
478 479 1.617018 TTCTGATGCAGAGGTCGGGG 61.617 60.000 0.00 0.00 41.75 5.73
479 480 2.038813 TGATGCAGAGGTCGGGGA 59.961 61.111 0.00 0.00 0.00 4.81
480 481 2.025767 CTGATGCAGAGGTCGGGGAG 62.026 65.000 0.00 0.00 32.44 4.30
481 482 2.039624 ATGCAGAGGTCGGGGAGT 59.960 61.111 0.00 0.00 0.00 3.85
482 483 2.022240 GATGCAGAGGTCGGGGAGTC 62.022 65.000 0.00 0.00 0.00 3.36
483 484 3.462678 GCAGAGGTCGGGGAGTCC 61.463 72.222 0.00 0.00 0.00 3.85
484 485 2.037367 CAGAGGTCGGGGAGTCCA 59.963 66.667 12.30 0.00 34.36 4.02
485 486 2.037527 AGAGGTCGGGGAGTCCAC 59.962 66.667 12.30 6.38 34.36 4.02
486 487 3.075641 GAGGTCGGGGAGTCCACC 61.076 72.222 12.30 10.33 37.13 4.61
487 488 3.602030 AGGTCGGGGAGTCCACCT 61.602 66.667 12.88 12.88 40.12 4.00
488 489 2.606826 GGTCGGGGAGTCCACCTT 60.607 66.667 12.30 0.00 35.32 3.50
489 490 2.222013 GGTCGGGGAGTCCACCTTT 61.222 63.158 12.30 0.00 35.32 3.11
490 491 1.759236 GTCGGGGAGTCCACCTTTT 59.241 57.895 12.30 0.00 34.36 2.27
491 492 0.109913 GTCGGGGAGTCCACCTTTTT 59.890 55.000 12.30 0.00 34.36 1.94
492 493 0.109723 TCGGGGAGTCCACCTTTTTG 59.890 55.000 12.30 0.00 34.36 2.44
493 494 0.109723 CGGGGAGTCCACCTTTTTGA 59.890 55.000 12.30 0.00 34.36 2.69
494 495 1.477923 CGGGGAGTCCACCTTTTTGAA 60.478 52.381 12.30 0.00 34.36 2.69
495 496 2.673258 GGGGAGTCCACCTTTTTGAAA 58.327 47.619 12.30 0.00 35.00 2.69
496 497 3.035363 GGGGAGTCCACCTTTTTGAAAA 58.965 45.455 12.30 0.00 35.00 2.29
497 498 3.452990 GGGGAGTCCACCTTTTTGAAAAA 59.547 43.478 12.30 2.83 35.00 1.94
545 546 3.276857 GCTGATCCAATCTGCTTCTTCA 58.723 45.455 10.46 0.00 46.68 3.02
547 548 4.515361 CTGATCCAATCTGCTTCTTCACT 58.485 43.478 0.00 0.00 0.00 3.41
554 555 6.942005 TCCAATCTGCTTCTTCACTTGATTTA 59.058 34.615 0.00 0.00 0.00 1.40
646 929 3.258372 TCGAGAAACCTTGCAGTACTGAT 59.742 43.478 27.08 2.77 0.00 2.90
650 933 4.520492 AGAAACCTTGCAGTACTGATTTGG 59.480 41.667 27.08 21.13 0.00 3.28
653 936 2.095059 CCTTGCAGTACTGATTTGGCAC 60.095 50.000 27.08 6.49 0.00 5.01
668 969 2.987547 CACCCAAGCCAGCCACTG 60.988 66.667 0.00 0.00 0.00 3.66
732 1034 5.353938 TCCGACCGTCCAAAATTTAGATAG 58.646 41.667 0.00 0.00 0.00 2.08
733 1035 5.127519 TCCGACCGTCCAAAATTTAGATAGA 59.872 40.000 0.00 0.00 0.00 1.98
734 1036 5.989777 CCGACCGTCCAAAATTTAGATAGAT 59.010 40.000 0.00 0.00 0.00 1.98
735 1037 7.014518 TCCGACCGTCCAAAATTTAGATAGATA 59.985 37.037 0.00 0.00 0.00 1.98
756 1058 4.704833 ACGCATTCTGCCGTGCCT 62.705 61.111 0.00 0.00 41.12 4.75
764 1066 1.185618 TCTGCCGTGCCTAGTCACTT 61.186 55.000 1.98 0.00 34.92 3.16
784 1086 2.055299 CACGTCCCCACCTTACACT 58.945 57.895 0.00 0.00 0.00 3.55
835 1137 2.535012 GCTCCTGGCTGGTATAGTTC 57.465 55.000 10.44 0.00 38.06 3.01
836 1138 1.070914 GCTCCTGGCTGGTATAGTTCC 59.929 57.143 10.44 0.00 38.06 3.62
837 1139 2.398588 CTCCTGGCTGGTATAGTTCCA 58.601 52.381 10.44 0.00 37.07 3.53
842 1144 3.989104 CTGGTATAGTTCCAGCCCG 57.011 57.895 0.00 0.00 44.46 6.13
843 1145 1.410004 CTGGTATAGTTCCAGCCCGA 58.590 55.000 0.00 0.00 44.46 5.14
902 1204 3.781307 ATGCCCGAGCGCACCTTA 61.781 61.111 11.47 0.00 42.70 2.69
903 1205 4.752879 TGCCCGAGCGCACCTTAC 62.753 66.667 11.47 0.00 44.31 2.34
904 1206 4.752879 GCCCGAGCGCACCTTACA 62.753 66.667 11.47 0.00 0.00 2.41
905 1207 2.813908 CCCGAGCGCACCTTACAC 60.814 66.667 11.47 0.00 0.00 2.90
906 1208 2.261671 CCGAGCGCACCTTACACT 59.738 61.111 11.47 0.00 0.00 3.55
916 1219 2.589157 CCTTACACTGGACCCGCCA 61.589 63.158 0.00 0.00 46.96 5.69
917 1220 1.375523 CTTACACTGGACCCGCCAC 60.376 63.158 0.00 0.00 43.33 5.01
918 1221 2.798148 CTTACACTGGACCCGCCACC 62.798 65.000 0.00 0.00 43.33 4.61
919 1222 3.839046 TACACTGGACCCGCCACCT 62.839 63.158 0.00 0.00 43.33 4.00
920 1223 4.394712 CACTGGACCCGCCACCTC 62.395 72.222 0.00 0.00 43.33 3.85
921 1224 4.954118 ACTGGACCCGCCACCTCA 62.954 66.667 0.00 0.00 43.33 3.86
993 1305 0.172352 CCGCTCTCACAGAGAACCTC 59.828 60.000 4.65 0.00 45.07 3.85
1014 1326 1.007618 GTATACCCAGCCTCGACGC 60.008 63.158 0.00 0.00 0.00 5.19
1203 1593 4.697756 CGCGGCCAGGTCAAGGAA 62.698 66.667 2.24 0.00 0.00 3.36
1359 1803 2.801631 GCCCGTCCTCTGCTGCTAT 61.802 63.158 0.00 0.00 0.00 2.97
1429 1969 8.411318 ACTACTACCGGTATTGTTAAATTTCG 57.589 34.615 16.25 0.68 0.00 3.46
1430 1970 8.250332 ACTACTACCGGTATTGTTAAATTTCGA 58.750 33.333 16.25 0.00 0.00 3.71
1432 1972 7.912383 ACTACCGGTATTGTTAAATTTCGATG 58.088 34.615 16.25 0.00 0.00 3.84
1603 2193 2.989422 CGAAACGGAGGCAAAAGATT 57.011 45.000 0.00 0.00 0.00 2.40
1604 2194 3.282831 CGAAACGGAGGCAAAAGATTT 57.717 42.857 0.00 0.00 0.00 2.17
1605 2195 2.979813 CGAAACGGAGGCAAAAGATTTG 59.020 45.455 0.00 0.00 0.00 2.32
1606 2196 2.438868 AACGGAGGCAAAAGATTTGC 57.561 45.000 17.18 17.18 44.22 3.68
1618 2208 7.599630 GCAAAAGATTTGCCTCATTCATTAA 57.400 32.000 15.12 0.00 39.38 1.40
1619 2209 8.031848 GCAAAAGATTTGCCTCATTCATTAAA 57.968 30.769 15.12 0.00 39.38 1.52
1620 2210 8.671028 GCAAAAGATTTGCCTCATTCATTAAAT 58.329 29.630 15.12 0.00 39.38 1.40
1628 2218 9.685276 TTTGCCTCATTCATTAAATAAGAGAGA 57.315 29.630 0.00 0.00 0.00 3.10
1629 2219 9.685276 TTGCCTCATTCATTAAATAAGAGAGAA 57.315 29.630 0.00 0.00 0.00 2.87
1630 2220 9.334947 TGCCTCATTCATTAAATAAGAGAGAAG 57.665 33.333 0.00 0.00 0.00 2.85
1631 2221 9.553064 GCCTCATTCATTAAATAAGAGAGAAGA 57.447 33.333 0.00 0.00 0.00 2.87
1643 2233 7.800300 ATAAGAGAGAAGAGTTTTAGGGTGT 57.200 36.000 0.00 0.00 0.00 4.16
1644 2234 6.502074 AAGAGAGAAGAGTTTTAGGGTGTT 57.498 37.500 0.00 0.00 0.00 3.32
1645 2235 7.613551 AAGAGAGAAGAGTTTTAGGGTGTTA 57.386 36.000 0.00 0.00 0.00 2.41
1646 2236 6.995364 AGAGAGAAGAGTTTTAGGGTGTTAC 58.005 40.000 0.00 0.00 0.00 2.50
1647 2237 6.553852 AGAGAGAAGAGTTTTAGGGTGTTACA 59.446 38.462 0.00 0.00 0.00 2.41
1648 2238 7.070821 AGAGAGAAGAGTTTTAGGGTGTTACAA 59.929 37.037 0.00 0.00 0.00 2.41
1649 2239 7.217906 AGAGAAGAGTTTTAGGGTGTTACAAG 58.782 38.462 0.00 0.00 0.00 3.16
1650 2240 6.896883 AGAAGAGTTTTAGGGTGTTACAAGT 58.103 36.000 0.00 0.00 0.00 3.16
1651 2241 6.766467 AGAAGAGTTTTAGGGTGTTACAAGTG 59.234 38.462 0.00 0.00 0.00 3.16
1652 2242 6.243216 AGAGTTTTAGGGTGTTACAAGTGA 57.757 37.500 0.00 0.00 0.00 3.41
1653 2243 6.053650 AGAGTTTTAGGGTGTTACAAGTGAC 58.946 40.000 0.00 0.00 0.00 3.67
1654 2244 5.128205 AGTTTTAGGGTGTTACAAGTGACC 58.872 41.667 0.00 0.00 0.00 4.02
1655 2245 4.774660 TTTAGGGTGTTACAAGTGACCA 57.225 40.909 0.00 0.00 0.00 4.02
1656 2246 2.632987 AGGGTGTTACAAGTGACCAC 57.367 50.000 0.00 0.00 0.00 4.16
1657 2247 1.841277 AGGGTGTTACAAGTGACCACA 59.159 47.619 2.78 0.00 0.00 4.17
1658 2248 1.944709 GGGTGTTACAAGTGACCACAC 59.055 52.381 2.78 0.00 46.24 3.82
1666 2256 2.512745 GTGACCACACACACGGCA 60.513 61.111 0.00 0.00 45.32 5.69
1667 2257 1.891919 GTGACCACACACACGGCAT 60.892 57.895 0.00 0.00 45.32 4.40
1668 2258 1.891449 TGACCACACACACGGCATG 60.891 57.895 0.00 0.00 0.00 4.06
1669 2259 2.594303 ACCACACACACGGCATGG 60.594 61.111 0.00 0.00 36.46 3.66
1670 2260 4.041917 CCACACACACGGCATGGC 62.042 66.667 9.69 9.69 0.00 4.40
1671 2261 3.285982 CACACACACGGCATGGCA 61.286 61.111 20.37 0.00 0.00 4.92
1672 2262 2.518112 ACACACACGGCATGGCAA 60.518 55.556 20.37 0.00 0.00 4.52
1673 2263 2.050168 CACACACGGCATGGCAAC 60.050 61.111 20.37 0.00 0.00 4.17
1674 2264 2.203337 ACACACGGCATGGCAACT 60.203 55.556 20.37 0.00 37.61 3.16
1675 2265 1.072332 ACACACGGCATGGCAACTA 59.928 52.632 20.37 0.00 37.61 2.24
1676 2266 1.234615 ACACACGGCATGGCAACTAC 61.235 55.000 20.37 0.00 37.61 2.73
1677 2267 0.955428 CACACGGCATGGCAACTACT 60.955 55.000 20.37 0.00 37.61 2.57
1678 2268 0.673644 ACACGGCATGGCAACTACTC 60.674 55.000 20.37 0.00 37.61 2.59
1679 2269 1.447838 ACGGCATGGCAACTACTCG 60.448 57.895 20.37 2.47 37.61 4.18
1680 2270 2.813179 CGGCATGGCAACTACTCGC 61.813 63.158 20.37 0.00 37.61 5.03
1681 2271 2.703409 GCATGGCAACTACTCGCG 59.297 61.111 0.00 0.00 37.61 5.87
1682 2272 2.100631 GCATGGCAACTACTCGCGT 61.101 57.895 5.77 0.00 37.61 6.01
1683 2273 0.804544 GCATGGCAACTACTCGCGTA 60.805 55.000 5.77 0.00 37.61 4.42
1684 2274 0.921347 CATGGCAACTACTCGCGTAC 59.079 55.000 5.77 0.00 37.61 3.67
1685 2275 0.528924 ATGGCAACTACTCGCGTACA 59.471 50.000 5.77 0.00 37.61 2.90
1686 2276 0.314618 TGGCAACTACTCGCGTACAA 59.685 50.000 5.77 0.00 37.61 2.41
1687 2277 1.067425 TGGCAACTACTCGCGTACAAT 60.067 47.619 5.77 0.00 37.61 2.71
1688 2278 2.164017 TGGCAACTACTCGCGTACAATA 59.836 45.455 5.77 0.00 37.61 1.90
1689 2279 3.181397 GGCAACTACTCGCGTACAATAA 58.819 45.455 5.77 0.00 0.00 1.40
1690 2280 3.800506 GGCAACTACTCGCGTACAATAAT 59.199 43.478 5.77 0.00 0.00 1.28
1691 2281 4.317839 GGCAACTACTCGCGTACAATAATG 60.318 45.833 5.77 0.00 0.00 1.90
1692 2282 4.317839 GCAACTACTCGCGTACAATAATGG 60.318 45.833 5.77 0.00 0.00 3.16
1693 2283 4.906065 ACTACTCGCGTACAATAATGGA 57.094 40.909 5.77 0.00 0.00 3.41
1694 2284 4.604976 ACTACTCGCGTACAATAATGGAC 58.395 43.478 5.77 0.00 37.01 4.02
1695 2285 2.817901 ACTCGCGTACAATAATGGACC 58.182 47.619 5.77 0.00 37.04 4.46
1696 2286 2.132762 CTCGCGTACAATAATGGACCC 58.867 52.381 5.77 0.00 37.04 4.46
1697 2287 1.202557 TCGCGTACAATAATGGACCCC 60.203 52.381 5.77 0.00 37.04 4.95
1698 2288 1.473610 CGCGTACAATAATGGACCCCA 60.474 52.381 0.00 0.00 37.04 4.96
1699 2289 2.218603 GCGTACAATAATGGACCCCAG 58.781 52.381 0.00 0.00 37.04 4.45
1700 2290 2.420967 GCGTACAATAATGGACCCCAGT 60.421 50.000 0.00 0.00 37.04 4.00
1701 2291 3.881220 CGTACAATAATGGACCCCAGTT 58.119 45.455 0.00 0.00 37.04 3.16
1702 2292 4.266714 CGTACAATAATGGACCCCAGTTT 58.733 43.478 0.00 0.00 37.04 2.66
1703 2293 4.703093 CGTACAATAATGGACCCCAGTTTT 59.297 41.667 0.00 0.00 37.04 2.43
1704 2294 5.184287 CGTACAATAATGGACCCCAGTTTTT 59.816 40.000 0.00 0.00 37.04 1.94
1720 2310 2.785713 TTTTTAGCACCCGCAAGAAC 57.214 45.000 0.00 0.00 42.27 3.01
1721 2311 0.955905 TTTTAGCACCCGCAAGAACC 59.044 50.000 0.00 0.00 42.27 3.62
1722 2312 0.891904 TTTAGCACCCGCAAGAACCC 60.892 55.000 0.00 0.00 42.27 4.11
1723 2313 2.058125 TTAGCACCCGCAAGAACCCA 62.058 55.000 0.00 0.00 42.27 4.51
1724 2314 2.058125 TAGCACCCGCAAGAACCCAA 62.058 55.000 0.00 0.00 42.27 4.12
1725 2315 2.494530 GCACCCGCAAGAACCCAAA 61.495 57.895 0.00 0.00 43.02 3.28
1726 2316 1.659794 CACCCGCAAGAACCCAAAG 59.340 57.895 0.00 0.00 43.02 2.77
1727 2317 2.200337 ACCCGCAAGAACCCAAAGC 61.200 57.895 0.00 0.00 43.02 3.51
1728 2318 1.903404 CCCGCAAGAACCCAAAGCT 60.903 57.895 0.00 0.00 43.02 3.74
1729 2319 1.463553 CCCGCAAGAACCCAAAGCTT 61.464 55.000 0.00 0.00 43.02 3.74
1730 2320 0.318955 CCGCAAGAACCCAAAGCTTG 60.319 55.000 0.00 0.00 41.36 4.01
1731 2321 0.318955 CGCAAGAACCCAAAGCTTGG 60.319 55.000 0.00 0.00 46.56 3.61
1739 2329 1.135315 CCAAAGCTTGGCGTCATCG 59.865 57.895 0.00 0.00 45.17 3.84
1740 2330 1.298157 CCAAAGCTTGGCGTCATCGA 61.298 55.000 0.00 0.00 45.17 3.59
1741 2331 0.729116 CAAAGCTTGGCGTCATCGAT 59.271 50.000 0.00 0.00 39.71 3.59
1742 2332 0.729116 AAAGCTTGGCGTCATCGATG 59.271 50.000 19.61 19.61 39.71 3.84
1743 2333 0.108186 AAGCTTGGCGTCATCGATGA 60.108 50.000 23.99 23.99 39.71 2.92
1744 2334 0.105593 AGCTTGGCGTCATCGATGAT 59.894 50.000 29.53 9.60 39.30 2.45
1745 2335 1.341209 AGCTTGGCGTCATCGATGATA 59.659 47.619 29.53 14.43 39.30 2.15
1746 2336 1.723542 GCTTGGCGTCATCGATGATAG 59.276 52.381 29.53 25.14 39.30 2.08
1747 2337 2.864097 GCTTGGCGTCATCGATGATAGT 60.864 50.000 29.53 0.00 39.30 2.12
1748 2338 2.706555 TGGCGTCATCGATGATAGTC 57.293 50.000 29.53 25.78 39.30 2.59
1749 2339 1.269723 TGGCGTCATCGATGATAGTCC 59.730 52.381 29.53 25.70 39.30 3.85
1750 2340 1.607713 GCGTCATCGATGATAGTCCG 58.392 55.000 29.53 26.02 39.30 4.79
1751 2341 1.729472 GCGTCATCGATGATAGTCCGG 60.729 57.143 29.53 14.11 39.30 5.14
1752 2342 1.804748 CGTCATCGATGATAGTCCGGA 59.195 52.381 29.53 0.00 39.30 5.14
1753 2343 2.159639 CGTCATCGATGATAGTCCGGAG 60.160 54.545 29.53 9.96 39.30 4.63
1754 2344 2.162608 GTCATCGATGATAGTCCGGAGG 59.837 54.545 29.53 0.00 44.84 4.30
1767 2357 3.391382 GGAGGAGGACCGGTGGTG 61.391 72.222 14.63 0.00 41.83 4.17
1768 2358 3.391382 GAGGAGGACCGGTGGTGG 61.391 72.222 14.63 0.00 41.83 4.61
1770 2360 4.016706 GGAGGACCGGTGGTGGTG 62.017 72.222 14.63 0.00 44.01 4.17
1774 2364 4.250305 GACCGGTGGTGGTGCACT 62.250 66.667 14.63 0.00 44.01 4.40
1775 2365 4.250305 ACCGGTGGTGGTGCACTC 62.250 66.667 17.98 10.23 41.85 3.51
1776 2366 3.941188 CCGGTGGTGGTGCACTCT 61.941 66.667 17.98 0.00 34.40 3.24
1777 2367 2.111043 CGGTGGTGGTGCACTCTT 59.889 61.111 17.98 0.00 34.40 2.85
1778 2368 2.253758 CGGTGGTGGTGCACTCTTG 61.254 63.158 17.98 0.00 34.40 3.02
1787 2377 3.159984 GCACTCTTGCGACGGAAG 58.840 61.111 21.60 21.60 39.50 3.46
1788 2378 1.372997 GCACTCTTGCGACGGAAGA 60.373 57.895 26.93 26.93 39.50 2.87
1789 2379 1.618640 GCACTCTTGCGACGGAAGAC 61.619 60.000 25.43 13.87 39.50 3.01
1790 2380 1.009389 CACTCTTGCGACGGAAGACC 61.009 60.000 25.43 0.00 0.00 3.85
1791 2381 1.446272 CTCTTGCGACGGAAGACCC 60.446 63.158 25.43 0.00 0.00 4.46
1800 2390 4.491101 GGAAGACCCGAGCGTTAC 57.509 61.111 0.00 0.00 0.00 2.50
1801 2391 1.515736 GGAAGACCCGAGCGTTACG 60.516 63.158 0.00 0.00 0.00 3.18
1812 2402 4.853507 CGTTACGCTCGTTCCAGA 57.146 55.556 0.00 0.00 0.00 3.86
1813 2403 3.324170 CGTTACGCTCGTTCCAGAT 57.676 52.632 0.00 0.00 0.00 2.90
1814 2404 1.625616 CGTTACGCTCGTTCCAGATT 58.374 50.000 0.00 0.00 0.00 2.40
1815 2405 1.320555 CGTTACGCTCGTTCCAGATTG 59.679 52.381 0.00 0.00 0.00 2.67
1816 2406 2.334838 GTTACGCTCGTTCCAGATTGT 58.665 47.619 0.00 0.00 0.00 2.71
1817 2407 2.273370 TACGCTCGTTCCAGATTGTC 57.727 50.000 0.00 0.00 0.00 3.18
1818 2408 0.389948 ACGCTCGTTCCAGATTGTCC 60.390 55.000 0.00 0.00 0.00 4.02
1819 2409 0.389817 CGCTCGTTCCAGATTGTCCA 60.390 55.000 0.00 0.00 0.00 4.02
1820 2410 1.808411 GCTCGTTCCAGATTGTCCAA 58.192 50.000 0.00 0.00 0.00 3.53
1821 2411 1.734465 GCTCGTTCCAGATTGTCCAAG 59.266 52.381 0.00 0.00 0.00 3.61
1822 2412 2.612972 GCTCGTTCCAGATTGTCCAAGA 60.613 50.000 0.00 0.00 0.00 3.02
1823 2413 3.664107 CTCGTTCCAGATTGTCCAAGAA 58.336 45.455 0.00 0.00 0.00 2.52
1824 2414 4.065088 CTCGTTCCAGATTGTCCAAGAAA 58.935 43.478 0.00 0.00 0.00 2.52
1825 2415 3.813166 TCGTTCCAGATTGTCCAAGAAAC 59.187 43.478 0.00 0.00 0.00 2.78
1826 2416 3.058224 CGTTCCAGATTGTCCAAGAAACC 60.058 47.826 0.00 0.00 0.00 3.27
1827 2417 3.874383 TCCAGATTGTCCAAGAAACCA 57.126 42.857 0.00 0.00 0.00 3.67
1828 2418 4.177537 TCCAGATTGTCCAAGAAACCAA 57.822 40.909 0.00 0.00 0.00 3.67
1829 2419 3.888930 TCCAGATTGTCCAAGAAACCAAC 59.111 43.478 0.00 0.00 0.00 3.77
1830 2420 3.636300 CCAGATTGTCCAAGAAACCAACA 59.364 43.478 0.00 0.00 0.00 3.33
1831 2421 4.281688 CCAGATTGTCCAAGAAACCAACAT 59.718 41.667 0.00 0.00 0.00 2.71
1832 2422 5.221501 CCAGATTGTCCAAGAAACCAACATT 60.222 40.000 0.00 0.00 0.00 2.71
1833 2423 5.693104 CAGATTGTCCAAGAAACCAACATTG 59.307 40.000 0.00 0.00 0.00 2.82
1834 2424 5.363580 AGATTGTCCAAGAAACCAACATTGT 59.636 36.000 0.00 0.00 0.00 2.71
1835 2425 6.549364 AGATTGTCCAAGAAACCAACATTGTA 59.451 34.615 0.00 0.00 0.00 2.41
1836 2426 6.531503 TTGTCCAAGAAACCAACATTGTAA 57.468 33.333 0.00 0.00 0.00 2.41
1837 2427 6.142818 TGTCCAAGAAACCAACATTGTAAG 57.857 37.500 0.00 0.00 0.00 2.34
1838 2428 5.068460 TGTCCAAGAAACCAACATTGTAAGG 59.932 40.000 6.65 6.65 0.00 2.69
1839 2429 4.586841 TCCAAGAAACCAACATTGTAAGGG 59.413 41.667 11.55 6.79 0.00 3.95
1840 2430 4.586841 CCAAGAAACCAACATTGTAAGGGA 59.413 41.667 11.55 0.00 0.00 4.20
1841 2431 5.278957 CCAAGAAACCAACATTGTAAGGGAG 60.279 44.000 11.55 0.00 0.00 4.30
1842 2432 4.407365 AGAAACCAACATTGTAAGGGAGG 58.593 43.478 11.55 0.00 0.00 4.30
1843 2433 2.215942 ACCAACATTGTAAGGGAGGC 57.784 50.000 11.55 0.00 0.00 4.70
1844 2434 1.272480 ACCAACATTGTAAGGGAGGCC 60.272 52.381 11.55 0.00 0.00 5.19
1845 2435 1.272425 CCAACATTGTAAGGGAGGCCA 60.272 52.381 5.01 0.00 0.00 5.36
1846 2436 2.094675 CAACATTGTAAGGGAGGCCAG 58.905 52.381 5.01 0.00 0.00 4.85
1847 2437 0.625849 ACATTGTAAGGGAGGCCAGG 59.374 55.000 5.01 0.00 0.00 4.45
1848 2438 0.106519 CATTGTAAGGGAGGCCAGGG 60.107 60.000 5.01 0.00 0.00 4.45
1849 2439 1.937924 ATTGTAAGGGAGGCCAGGGC 61.938 60.000 5.01 4.33 41.06 5.19
1850 2440 2.692741 GTAAGGGAGGCCAGGGCT 60.693 66.667 17.36 17.36 42.48 5.19
1858 2448 4.593864 GGCCAGGGCTCGTCGATC 62.594 72.222 10.60 0.00 41.60 3.69
1859 2449 3.532155 GCCAGGGCTCGTCGATCT 61.532 66.667 2.30 0.00 38.26 2.75
1860 2450 2.415010 CCAGGGCTCGTCGATCTG 59.585 66.667 0.00 4.56 0.00 2.90
1861 2451 2.415010 CAGGGCTCGTCGATCTGG 59.585 66.667 0.00 0.00 0.00 3.86
1862 2452 2.835431 AGGGCTCGTCGATCTGGG 60.835 66.667 0.00 0.00 0.00 4.45
1863 2453 3.148279 GGGCTCGTCGATCTGGGT 61.148 66.667 0.00 0.00 0.00 4.51
1864 2454 2.413765 GGCTCGTCGATCTGGGTC 59.586 66.667 0.00 0.00 0.00 4.46
1865 2455 2.415608 GGCTCGTCGATCTGGGTCA 61.416 63.158 0.00 0.00 0.00 4.02
1866 2456 1.511305 GCTCGTCGATCTGGGTCAA 59.489 57.895 0.00 0.00 0.00 3.18
1867 2457 0.526524 GCTCGTCGATCTGGGTCAAG 60.527 60.000 0.00 0.00 0.00 3.02
1868 2458 0.811915 CTCGTCGATCTGGGTCAAGT 59.188 55.000 0.00 0.00 0.00 3.16
1869 2459 1.202582 CTCGTCGATCTGGGTCAAGTT 59.797 52.381 0.00 0.00 0.00 2.66
1870 2460 1.067846 TCGTCGATCTGGGTCAAGTTG 60.068 52.381 0.00 0.00 0.00 3.16
1871 2461 1.079503 GTCGATCTGGGTCAAGTTGC 58.920 55.000 0.00 0.00 0.00 4.17
1872 2462 0.389817 TCGATCTGGGTCAAGTTGCG 60.390 55.000 0.00 0.00 0.00 4.85
1873 2463 0.389817 CGATCTGGGTCAAGTTGCGA 60.390 55.000 0.00 0.00 0.00 5.10
1874 2464 1.808411 GATCTGGGTCAAGTTGCGAA 58.192 50.000 0.00 0.00 0.00 4.70
1875 2465 1.734465 GATCTGGGTCAAGTTGCGAAG 59.266 52.381 0.00 0.00 0.00 3.79
1876 2466 0.250295 TCTGGGTCAAGTTGCGAAGG 60.250 55.000 0.00 0.00 0.00 3.46
1877 2467 0.535102 CTGGGTCAAGTTGCGAAGGT 60.535 55.000 0.00 0.00 0.00 3.50
1878 2468 0.106918 TGGGTCAAGTTGCGAAGGTT 60.107 50.000 0.00 0.00 0.00 3.50
1879 2469 1.029681 GGGTCAAGTTGCGAAGGTTT 58.970 50.000 0.00 0.00 0.00 3.27
1880 2470 1.407618 GGGTCAAGTTGCGAAGGTTTT 59.592 47.619 0.00 0.00 0.00 2.43
1881 2471 2.619646 GGGTCAAGTTGCGAAGGTTTTA 59.380 45.455 0.00 0.00 0.00 1.52
1882 2472 3.067040 GGGTCAAGTTGCGAAGGTTTTAA 59.933 43.478 0.00 0.00 0.00 1.52
1885 2475 4.206404 GTCAAGTTGCGAAGGTTTTAAAGC 59.794 41.667 0.00 0.00 0.00 3.51
1913 2504 1.019673 CTGATATGTTTGCCGCTGCT 58.980 50.000 0.70 0.00 38.71 4.24
1930 2521 2.765135 CTGCTTCTTCATCTCCTCCTCA 59.235 50.000 0.00 0.00 0.00 3.86
1996 2591 2.807837 GCTGCTTGCTTGGGTTTGATTT 60.808 45.455 0.00 0.00 38.95 2.17
1997 2592 2.803956 CTGCTTGCTTGGGTTTGATTTG 59.196 45.455 0.00 0.00 0.00 2.32
2091 2709 2.194271 GTGTGCGCTCCTAGTATTGTC 58.806 52.381 9.73 0.00 0.00 3.18
2100 2718 4.201950 GCTCCTAGTATTGTCGTTCCGTTA 60.202 45.833 0.00 0.00 0.00 3.18
2114 2732 8.332464 TGTCGTTCCGTTATTTATCAAATCATC 58.668 33.333 0.00 0.00 32.38 2.92
2145 2775 8.988934 CCATATACACTAAGCATTTCGTGTTAT 58.011 33.333 2.07 0.00 40.40 1.89
2172 2807 1.180029 CTTGTTTGGCCATCAGAGGG 58.820 55.000 6.09 0.00 0.00 4.30
2201 2836 7.414436 TGCTTCAAGTTGTGTACTAACATTTC 58.586 34.615 13.50 0.00 38.08 2.17
2268 2903 1.689984 TCATGTGTGCTGCAAGGAAA 58.310 45.000 2.77 0.00 34.45 3.13
2300 2935 2.956987 CGCTGTTTGAGGGGCAAG 59.043 61.111 0.00 0.00 37.87 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 0.460987 GTCAGGCTGACTCCCATTCG 60.461 60.000 34.49 0.00 43.73 3.34
157 158 0.520404 GAGTGAGTAGCGACCACGAA 59.480 55.000 11.00 0.00 42.66 3.85
158 159 1.303799 GGAGTGAGTAGCGACCACGA 61.304 60.000 11.00 0.00 42.66 4.35
161 162 1.002990 TCGGAGTGAGTAGCGACCA 60.003 57.895 0.00 0.00 0.00 4.02
162 163 1.428620 GTCGGAGTGAGTAGCGACC 59.571 63.158 0.00 0.00 0.00 4.79
163 164 1.060622 CGTCGGAGTGAGTAGCGAC 59.939 63.158 0.00 0.00 0.00 5.19
164 165 2.104859 CCGTCGGAGTGAGTAGCGA 61.105 63.158 4.91 0.00 0.00 4.93
166 167 1.722677 CTCCGTCGGAGTGAGTAGC 59.277 63.158 29.66 0.00 44.25 3.58
175 176 3.997400 CTCTCTGGCCTCCGTCGGA 62.997 68.421 14.54 14.54 0.00 4.55
176 177 3.522731 CTCTCTGGCCTCCGTCGG 61.523 72.222 4.39 4.39 0.00 4.79
177 178 4.200283 GCTCTCTGGCCTCCGTCG 62.200 72.222 3.32 0.00 0.00 5.12
178 179 1.965754 AATGCTCTCTGGCCTCCGTC 61.966 60.000 3.32 0.00 0.00 4.79
179 180 1.557269 AAATGCTCTCTGGCCTCCGT 61.557 55.000 3.32 0.00 0.00 4.69
181 182 0.750911 CCAAATGCTCTCTGGCCTCC 60.751 60.000 3.32 0.00 0.00 4.30
182 183 0.034670 ACCAAATGCTCTCTGGCCTC 60.035 55.000 3.32 0.00 33.19 4.70
183 184 0.407139 AACCAAATGCTCTCTGGCCT 59.593 50.000 3.32 0.00 33.19 5.19
184 185 1.745653 GTAACCAAATGCTCTCTGGCC 59.254 52.381 0.00 0.00 33.19 5.36
185 186 2.421424 CAGTAACCAAATGCTCTCTGGC 59.579 50.000 0.00 0.00 33.19 4.85
186 187 3.012518 CCAGTAACCAAATGCTCTCTGG 58.987 50.000 0.00 0.00 35.90 3.86
187 188 3.942829 TCCAGTAACCAAATGCTCTCTG 58.057 45.455 0.00 0.00 0.00 3.35
188 189 4.472833 AGATCCAGTAACCAAATGCTCTCT 59.527 41.667 0.00 0.00 0.00 3.10
189 190 4.775236 AGATCCAGTAACCAAATGCTCTC 58.225 43.478 0.00 0.00 0.00 3.20
190 191 4.851639 AGATCCAGTAACCAAATGCTCT 57.148 40.909 0.00 0.00 0.00 4.09
191 192 5.163612 GGAAAGATCCAGTAACCAAATGCTC 60.164 44.000 0.00 0.00 45.79 4.26
192 193 4.706962 GGAAAGATCCAGTAACCAAATGCT 59.293 41.667 0.00 0.00 45.79 3.79
194 195 4.438744 GCGGAAAGATCCAGTAACCAAATG 60.439 45.833 0.00 0.00 46.97 2.32
195 196 3.694566 GCGGAAAGATCCAGTAACCAAAT 59.305 43.478 0.00 0.00 46.97 2.32
196 197 3.078837 GCGGAAAGATCCAGTAACCAAA 58.921 45.455 0.00 0.00 46.97 3.28
197 198 2.304761 AGCGGAAAGATCCAGTAACCAA 59.695 45.455 0.00 0.00 46.97 3.67
199 200 2.280628 CAGCGGAAAGATCCAGTAACC 58.719 52.381 0.00 0.00 46.97 2.85
200 201 2.280628 CCAGCGGAAAGATCCAGTAAC 58.719 52.381 0.00 0.00 46.97 2.50
202 203 0.830648 CCCAGCGGAAAGATCCAGTA 59.169 55.000 0.00 0.00 46.97 2.74
204 205 0.179062 CTCCCAGCGGAAAGATCCAG 60.179 60.000 0.00 0.00 46.97 3.86
205 206 0.617535 TCTCCCAGCGGAAAGATCCA 60.618 55.000 0.00 0.00 46.97 3.41
207 208 1.542108 CCATCTCCCAGCGGAAAGATC 60.542 57.143 8.41 0.00 37.86 2.75
208 209 0.471617 CCATCTCCCAGCGGAAAGAT 59.528 55.000 0.00 2.47 37.86 2.40
209 210 0.909610 ACCATCTCCCAGCGGAAAGA 60.910 55.000 0.00 0.40 37.86 2.52
210 211 0.830648 TACCATCTCCCAGCGGAAAG 59.169 55.000 0.00 0.00 37.86 2.62
211 212 0.830648 CTACCATCTCCCAGCGGAAA 59.169 55.000 0.00 0.00 37.86 3.13
212 213 1.686325 GCTACCATCTCCCAGCGGAA 61.686 60.000 0.00 0.00 37.86 4.30
213 214 2.134287 GCTACCATCTCCCAGCGGA 61.134 63.158 0.00 0.00 36.45 5.54
214 215 2.093537 GAGCTACCATCTCCCAGCGG 62.094 65.000 0.00 0.00 39.04 5.52
217 218 1.467678 CCCGAGCTACCATCTCCCAG 61.468 65.000 0.00 0.00 0.00 4.45
218 219 1.457643 CCCGAGCTACCATCTCCCA 60.458 63.158 0.00 0.00 0.00 4.37
219 220 0.543174 ATCCCGAGCTACCATCTCCC 60.543 60.000 0.00 0.00 0.00 4.30
221 222 3.626930 AGATATCCCGAGCTACCATCTC 58.373 50.000 0.00 0.00 0.00 2.75
222 223 3.748645 AGATATCCCGAGCTACCATCT 57.251 47.619 0.00 0.00 0.00 2.90
223 224 3.764434 TGAAGATATCCCGAGCTACCATC 59.236 47.826 0.00 0.00 0.00 3.51
227 228 3.612004 CGGTTGAAGATATCCCGAGCTAC 60.612 52.174 10.76 0.00 41.08 3.58
228 229 2.557056 CGGTTGAAGATATCCCGAGCTA 59.443 50.000 10.76 0.00 41.08 3.32
229 230 1.341531 CGGTTGAAGATATCCCGAGCT 59.658 52.381 10.76 0.00 41.08 4.09
230 231 1.605712 CCGGTTGAAGATATCCCGAGC 60.606 57.143 16.17 9.53 41.08 5.03
231 232 1.687123 ACCGGTTGAAGATATCCCGAG 59.313 52.381 16.17 10.10 41.08 4.63
232 233 1.784358 ACCGGTTGAAGATATCCCGA 58.216 50.000 16.17 0.00 41.08 5.14
233 234 2.612212 CAAACCGGTTGAAGATATCCCG 59.388 50.000 23.08 9.61 39.87 5.14
234 235 2.949644 CCAAACCGGTTGAAGATATCCC 59.050 50.000 23.08 0.00 39.87 3.85
235 236 3.881220 TCCAAACCGGTTGAAGATATCC 58.119 45.455 23.08 0.00 39.87 2.59
236 237 5.007724 GTCATCCAAACCGGTTGAAGATATC 59.992 44.000 23.08 14.09 43.62 1.63
237 238 4.881850 GTCATCCAAACCGGTTGAAGATAT 59.118 41.667 23.08 6.33 43.62 1.63
238 239 4.258543 GTCATCCAAACCGGTTGAAGATA 58.741 43.478 23.08 2.88 43.62 1.98
239 240 3.081804 GTCATCCAAACCGGTTGAAGAT 58.918 45.455 23.08 19.33 43.62 2.40
240 241 2.500229 GTCATCCAAACCGGTTGAAGA 58.500 47.619 23.08 17.89 43.62 2.87
241 242 1.196808 CGTCATCCAAACCGGTTGAAG 59.803 52.381 23.08 12.61 43.62 3.02
242 243 1.231221 CGTCATCCAAACCGGTTGAA 58.769 50.000 23.08 9.90 43.62 2.69
243 244 0.604243 CCGTCATCCAAACCGGTTGA 60.604 55.000 23.08 15.50 40.54 3.18
244 245 1.873165 CCGTCATCCAAACCGGTTG 59.127 57.895 23.08 14.70 35.78 3.77
245 246 4.390048 CCGTCATCCAAACCGGTT 57.610 55.556 15.86 15.86 35.78 4.44
247 248 0.392461 ATGACCGTCATCCAAACCGG 60.392 55.000 8.28 0.00 45.72 5.28
248 249 0.726827 CATGACCGTCATCCAAACCG 59.273 55.000 11.24 0.00 34.28 4.44
249 250 1.821216 ACATGACCGTCATCCAAACC 58.179 50.000 11.24 0.00 34.28 3.27
250 251 5.236478 CCTATTACATGACCGTCATCCAAAC 59.764 44.000 11.24 0.00 34.28 2.93
251 252 5.129650 TCCTATTACATGACCGTCATCCAAA 59.870 40.000 11.24 6.61 34.28 3.28
252 253 4.651962 TCCTATTACATGACCGTCATCCAA 59.348 41.667 11.24 8.58 34.28 3.53
253 254 4.219919 TCCTATTACATGACCGTCATCCA 58.780 43.478 11.24 0.00 34.28 3.41
254 255 4.866508 TCCTATTACATGACCGTCATCC 57.133 45.455 11.24 0.00 34.28 3.51
255 256 7.094334 TGTCTATCCTATTACATGACCGTCATC 60.094 40.741 11.24 0.00 34.28 2.92
256 257 6.719829 TGTCTATCCTATTACATGACCGTCAT 59.280 38.462 8.28 8.28 37.65 3.06
257 258 6.066032 TGTCTATCCTATTACATGACCGTCA 58.934 40.000 3.10 3.10 0.00 4.35
258 259 6.570672 TGTCTATCCTATTACATGACCGTC 57.429 41.667 0.00 0.00 0.00 4.79
259 260 6.948886 AGATGTCTATCCTATTACATGACCGT 59.051 38.462 0.00 0.00 32.87 4.83
260 261 7.397892 AGATGTCTATCCTATTACATGACCG 57.602 40.000 0.00 0.00 32.87 4.79
261 262 9.469097 ACTAGATGTCTATCCTATTACATGACC 57.531 37.037 0.00 0.00 32.87 4.02
285 286 8.097662 GGCTGGCTATCAATAGATAAGTAAACT 58.902 37.037 1.15 0.00 36.35 2.66
286 287 7.063544 CGGCTGGCTATCAATAGATAAGTAAAC 59.936 40.741 0.00 0.00 36.35 2.01
287 288 7.097192 CGGCTGGCTATCAATAGATAAGTAAA 58.903 38.462 0.00 0.00 36.35 2.01
288 289 6.351033 CCGGCTGGCTATCAATAGATAAGTAA 60.351 42.308 0.00 0.00 36.35 2.24
289 290 5.127194 CCGGCTGGCTATCAATAGATAAGTA 59.873 44.000 0.00 0.00 36.35 2.24
290 291 4.081420 CCGGCTGGCTATCAATAGATAAGT 60.081 45.833 0.00 0.00 36.35 2.24
291 292 4.081420 ACCGGCTGGCTATCAATAGATAAG 60.081 45.833 12.89 0.00 39.70 1.73
292 293 3.838317 ACCGGCTGGCTATCAATAGATAA 59.162 43.478 12.89 0.00 39.70 1.75
293 294 3.441101 ACCGGCTGGCTATCAATAGATA 58.559 45.455 12.89 0.00 39.70 1.98
294 295 2.260822 ACCGGCTGGCTATCAATAGAT 58.739 47.619 12.89 0.00 39.70 1.98
295 296 1.717032 ACCGGCTGGCTATCAATAGA 58.283 50.000 12.89 0.00 39.70 1.98
296 297 2.146342 CAACCGGCTGGCTATCAATAG 58.854 52.381 12.89 0.00 39.70 1.73
297 298 1.488812 ACAACCGGCTGGCTATCAATA 59.511 47.619 12.89 0.00 39.70 1.90
298 299 0.255890 ACAACCGGCTGGCTATCAAT 59.744 50.000 12.89 0.00 39.70 2.57
299 300 0.676466 CACAACCGGCTGGCTATCAA 60.676 55.000 12.89 0.00 39.70 2.57
300 301 1.078497 CACAACCGGCTGGCTATCA 60.078 57.895 12.89 0.00 39.70 2.15
301 302 1.819632 CCACAACCGGCTGGCTATC 60.820 63.158 12.89 0.00 39.70 2.08
302 303 2.272146 CCACAACCGGCTGGCTAT 59.728 61.111 12.89 0.00 39.70 2.97
310 311 0.541863 AGATAAGAGGCCACAACCGG 59.458 55.000 5.01 0.00 33.69 5.28
311 312 2.009774 CAAGATAAGAGGCCACAACCG 58.990 52.381 5.01 0.00 33.69 4.44
312 313 2.369394 CCAAGATAAGAGGCCACAACC 58.631 52.381 5.01 0.00 0.00 3.77
313 314 1.745653 GCCAAGATAAGAGGCCACAAC 59.254 52.381 5.01 0.00 42.58 3.32
314 315 2.128771 GCCAAGATAAGAGGCCACAA 57.871 50.000 5.01 0.00 42.58 3.33
315 316 3.882131 GCCAAGATAAGAGGCCACA 57.118 52.632 5.01 0.00 42.58 4.17
320 321 4.279671 ACATCGACTAGCCAAGATAAGAGG 59.720 45.833 0.00 0.00 0.00 3.69
321 322 5.446143 ACATCGACTAGCCAAGATAAGAG 57.554 43.478 0.00 0.00 0.00 2.85
322 323 5.854010 AACATCGACTAGCCAAGATAAGA 57.146 39.130 0.00 0.00 0.00 2.10
323 324 6.276847 AGAAACATCGACTAGCCAAGATAAG 58.723 40.000 0.00 0.00 0.00 1.73
324 325 6.222038 AGAAACATCGACTAGCCAAGATAA 57.778 37.500 0.00 0.00 0.00 1.75
325 326 5.854010 AGAAACATCGACTAGCCAAGATA 57.146 39.130 0.00 0.00 0.00 1.98
326 327 4.744795 AGAAACATCGACTAGCCAAGAT 57.255 40.909 0.00 0.00 0.00 2.40
327 328 5.250235 CTAGAAACATCGACTAGCCAAGA 57.750 43.478 0.00 0.00 0.00 3.02
333 334 4.098044 TGAAGGGCTAGAAACATCGACTAG 59.902 45.833 0.00 3.31 37.32 2.57
334 335 4.021229 TGAAGGGCTAGAAACATCGACTA 58.979 43.478 0.00 0.00 0.00 2.59
335 336 2.832129 TGAAGGGCTAGAAACATCGACT 59.168 45.455 0.00 0.00 0.00 4.18
336 337 3.247006 TGAAGGGCTAGAAACATCGAC 57.753 47.619 0.00 0.00 0.00 4.20
337 338 3.432186 CCATGAAGGGCTAGAAACATCGA 60.432 47.826 0.00 0.00 0.00 3.59
338 339 2.874701 CCATGAAGGGCTAGAAACATCG 59.125 50.000 0.00 0.00 0.00 3.84
350 351 0.325933 TCACACAGAGCCATGAAGGG 59.674 55.000 0.00 0.00 38.09 3.95
351 352 1.735386 CTCACACAGAGCCATGAAGG 58.265 55.000 0.00 0.00 37.59 3.46
361 362 5.643379 AAAGCAAAGAAAACTCACACAGA 57.357 34.783 0.00 0.00 0.00 3.41
362 363 6.710692 AAAAAGCAAAGAAAACTCACACAG 57.289 33.333 0.00 0.00 0.00 3.66
389 390 8.700051 TCAACAAGGTTCCAATATCTTCAAAAA 58.300 29.630 0.00 0.00 0.00 1.94
390 391 8.141268 GTCAACAAGGTTCCAATATCTTCAAAA 58.859 33.333 0.00 0.00 0.00 2.44
391 392 7.286546 TGTCAACAAGGTTCCAATATCTTCAAA 59.713 33.333 0.00 0.00 0.00 2.69
392 393 6.775142 TGTCAACAAGGTTCCAATATCTTCAA 59.225 34.615 0.00 0.00 0.00 2.69
393 394 6.206634 GTGTCAACAAGGTTCCAATATCTTCA 59.793 38.462 0.00 0.00 0.00 3.02
394 395 6.431234 AGTGTCAACAAGGTTCCAATATCTTC 59.569 38.462 0.00 0.00 0.00 2.87
395 396 6.306987 AGTGTCAACAAGGTTCCAATATCTT 58.693 36.000 0.00 0.00 0.00 2.40
396 397 5.880901 AGTGTCAACAAGGTTCCAATATCT 58.119 37.500 0.00 0.00 0.00 1.98
397 398 6.575162 AAGTGTCAACAAGGTTCCAATATC 57.425 37.500 0.00 0.00 0.00 1.63
398 399 6.777580 AGAAAGTGTCAACAAGGTTCCAATAT 59.222 34.615 0.00 0.00 0.00 1.28
399 400 6.126409 AGAAAGTGTCAACAAGGTTCCAATA 58.874 36.000 0.00 0.00 0.00 1.90
400 401 4.956075 AGAAAGTGTCAACAAGGTTCCAAT 59.044 37.500 0.00 0.00 0.00 3.16
401 402 4.340617 AGAAAGTGTCAACAAGGTTCCAA 58.659 39.130 0.00 0.00 0.00 3.53
402 403 3.963129 AGAAAGTGTCAACAAGGTTCCA 58.037 40.909 0.00 0.00 0.00 3.53
403 404 4.983671 AAGAAAGTGTCAACAAGGTTCC 57.016 40.909 0.00 0.00 0.00 3.62
424 425 7.146648 CGGCCAACTTACTTATTAACCAAAAA 58.853 34.615 2.24 0.00 0.00 1.94
425 426 6.264970 ACGGCCAACTTACTTATTAACCAAAA 59.735 34.615 2.24 0.00 0.00 2.44
426 427 5.769162 ACGGCCAACTTACTTATTAACCAAA 59.231 36.000 2.24 0.00 0.00 3.28
427 428 5.315348 ACGGCCAACTTACTTATTAACCAA 58.685 37.500 2.24 0.00 0.00 3.67
428 429 4.909001 ACGGCCAACTTACTTATTAACCA 58.091 39.130 2.24 0.00 0.00 3.67
429 430 5.885230 AACGGCCAACTTACTTATTAACC 57.115 39.130 2.24 0.00 0.00 2.85
430 431 5.570206 GCAAACGGCCAACTTACTTATTAAC 59.430 40.000 2.24 0.00 36.11 2.01
431 432 5.241064 TGCAAACGGCCAACTTACTTATTAA 59.759 36.000 2.24 0.00 43.89 1.40
432 433 4.760715 TGCAAACGGCCAACTTACTTATTA 59.239 37.500 2.24 0.00 43.89 0.98
433 434 3.570550 TGCAAACGGCCAACTTACTTATT 59.429 39.130 2.24 0.00 43.89 1.40
434 435 3.150767 TGCAAACGGCCAACTTACTTAT 58.849 40.909 2.24 0.00 43.89 1.73
435 436 2.573369 TGCAAACGGCCAACTTACTTA 58.427 42.857 2.24 0.00 43.89 2.24
436 437 1.394618 TGCAAACGGCCAACTTACTT 58.605 45.000 2.24 0.00 43.89 2.24
437 438 1.539827 GATGCAAACGGCCAACTTACT 59.460 47.619 2.24 0.00 43.89 2.24
438 439 1.268352 TGATGCAAACGGCCAACTTAC 59.732 47.619 2.24 0.00 43.89 2.34
439 440 1.610363 TGATGCAAACGGCCAACTTA 58.390 45.000 2.24 0.00 43.89 2.24
440 441 0.968405 ATGATGCAAACGGCCAACTT 59.032 45.000 2.24 0.00 43.89 2.66
441 442 0.968405 AATGATGCAAACGGCCAACT 59.032 45.000 2.24 0.00 43.89 3.16
442 443 1.067635 AGAATGATGCAAACGGCCAAC 60.068 47.619 2.24 0.00 43.89 3.77
443 444 1.067706 CAGAATGATGCAAACGGCCAA 60.068 47.619 2.24 0.00 39.87 4.52
444 445 0.527113 CAGAATGATGCAAACGGCCA 59.473 50.000 2.24 0.00 39.87 5.36
445 446 0.810648 TCAGAATGATGCAAACGGCC 59.189 50.000 0.00 0.00 42.56 6.13
457 458 1.579698 CCGACCTCTGCATCAGAATG 58.420 55.000 0.00 0.00 40.18 2.67
458 459 0.467384 CCCGACCTCTGCATCAGAAT 59.533 55.000 0.00 0.00 40.18 2.40
459 460 1.617018 CCCCGACCTCTGCATCAGAA 61.617 60.000 0.00 0.00 40.18 3.02
460 461 2.060383 CCCCGACCTCTGCATCAGA 61.060 63.158 0.00 0.00 38.25 3.27
461 462 2.025767 CTCCCCGACCTCTGCATCAG 62.026 65.000 0.00 0.00 0.00 2.90
462 463 2.038813 TCCCCGACCTCTGCATCA 59.961 61.111 0.00 0.00 0.00 3.07
463 464 2.022240 GACTCCCCGACCTCTGCATC 62.022 65.000 0.00 0.00 0.00 3.91
464 465 2.039624 ACTCCCCGACCTCTGCAT 59.960 61.111 0.00 0.00 0.00 3.96
465 466 2.680352 GACTCCCCGACCTCTGCA 60.680 66.667 0.00 0.00 0.00 4.41
466 467 3.462678 GGACTCCCCGACCTCTGC 61.463 72.222 0.00 0.00 0.00 4.26
467 468 2.037367 TGGACTCCCCGACCTCTG 59.963 66.667 0.00 0.00 37.93 3.35
468 469 2.037527 GTGGACTCCCCGACCTCT 59.962 66.667 0.00 0.00 37.93 3.69
469 470 3.075641 GGTGGACTCCCCGACCTC 61.076 72.222 0.00 0.00 37.93 3.85
470 471 2.691240 AAAGGTGGACTCCCCGACCT 62.691 60.000 0.45 0.45 43.62 3.85
471 472 1.775934 AAAAGGTGGACTCCCCGACC 61.776 60.000 0.00 0.00 37.93 4.79
472 473 0.109913 AAAAAGGTGGACTCCCCGAC 59.890 55.000 0.00 0.00 37.93 4.79
473 474 0.109723 CAAAAAGGTGGACTCCCCGA 59.890 55.000 0.00 0.00 37.93 5.14
474 475 0.109723 TCAAAAAGGTGGACTCCCCG 59.890 55.000 0.00 0.00 37.93 5.73
475 476 2.375014 TTCAAAAAGGTGGACTCCCC 57.625 50.000 0.00 0.00 0.00 4.81
476 477 4.746535 TTTTTCAAAAAGGTGGACTCCC 57.253 40.909 0.00 0.00 0.00 4.30
497 498 6.261826 GGATCGATCCTCATCTTCATGTTTTT 59.738 38.462 32.91 0.00 43.73 1.94
498 499 5.762218 GGATCGATCCTCATCTTCATGTTTT 59.238 40.000 32.91 0.00 43.73 2.43
499 500 5.303971 GGATCGATCCTCATCTTCATGTTT 58.696 41.667 32.91 0.00 43.73 2.83
500 501 4.262808 GGGATCGATCCTCATCTTCATGTT 60.263 45.833 36.72 0.00 46.35 2.71
506 507 0.605589 GCGGGATCGATCCTCATCTT 59.394 55.000 36.72 0.00 46.35 2.40
512 513 2.271940 GATCAGCGGGATCGATCCT 58.728 57.895 36.72 20.82 46.35 3.24
526 527 4.564782 AGTGAAGAAGCAGATTGGATCA 57.435 40.909 0.00 0.00 0.00 2.92
545 546 4.265073 GGAGTGATGCAGGTAAATCAAGT 58.735 43.478 0.00 0.00 34.70 3.16
547 548 3.010027 TGGGAGTGATGCAGGTAAATCAA 59.990 43.478 0.00 0.00 34.70 2.57
554 555 0.700564 ATGTTGGGAGTGATGCAGGT 59.299 50.000 0.00 0.00 0.00 4.00
621 903 2.910688 ACTGCAAGGTTTCTCGAAGA 57.089 45.000 0.00 0.00 39.30 2.87
650 933 4.982701 AGTGGCTGGCTTGGGTGC 62.983 66.667 2.00 0.00 0.00 5.01
756 1058 1.116536 TGGGGACGTGCAAGTGACTA 61.117 55.000 10.87 0.00 0.00 2.59
764 1066 2.141448 TGTAAGGTGGGGACGTGCA 61.141 57.895 9.96 0.00 0.00 4.57
830 1132 2.058595 GGCTCTCGGGCTGGAACTA 61.059 63.158 0.00 0.00 37.53 2.24
831 1133 3.394836 GGCTCTCGGGCTGGAACT 61.395 66.667 0.00 0.00 37.53 3.01
832 1134 4.475135 GGGCTCTCGGGCTGGAAC 62.475 72.222 0.00 0.00 40.65 3.62
854 1156 2.106332 GTACATGGCGGTCCTCGG 59.894 66.667 0.00 0.00 39.69 4.63
855 1157 2.278596 CGTACATGGCGGTCCTCG 60.279 66.667 0.00 0.00 42.76 4.63
856 1158 2.573609 AAGCGTACATGGCGGTCCTC 62.574 60.000 14.97 0.00 39.22 3.71
857 1159 2.180159 AAAGCGTACATGGCGGTCCT 62.180 55.000 14.97 5.38 39.22 3.85
858 1160 1.303091 AAAAGCGTACATGGCGGTCC 61.303 55.000 14.97 0.05 39.22 4.46
859 1161 0.179200 CAAAAGCGTACATGGCGGTC 60.179 55.000 14.97 0.65 39.22 4.79
860 1162 1.582610 CCAAAAGCGTACATGGCGGT 61.583 55.000 10.13 10.13 42.04 5.68
897 1199 2.590114 GGCGGGTCCAGTGTAAGGT 61.590 63.158 0.00 0.00 34.01 3.50
899 1201 3.065306 TGGCGGGTCCAGTGTAAG 58.935 61.111 0.00 0.00 40.72 2.34
906 1208 2.933287 ATTGAGGTGGCGGGTCCA 60.933 61.111 0.00 0.00 44.18 4.02
916 1219 3.618507 CGGAAAAGAGCAGAGATTGAGGT 60.619 47.826 0.00 0.00 0.00 3.85
917 1220 2.935201 CGGAAAAGAGCAGAGATTGAGG 59.065 50.000 0.00 0.00 0.00 3.86
918 1221 2.935201 CCGGAAAAGAGCAGAGATTGAG 59.065 50.000 0.00 0.00 0.00 3.02
919 1222 2.936993 GCCGGAAAAGAGCAGAGATTGA 60.937 50.000 5.05 0.00 0.00 2.57
920 1223 1.399791 GCCGGAAAAGAGCAGAGATTG 59.600 52.381 5.05 0.00 0.00 2.67
921 1224 1.680249 GGCCGGAAAAGAGCAGAGATT 60.680 52.381 5.05 0.00 0.00 2.40
1014 1326 1.539827 GAGGTTGGTGGATTGTTTCGG 59.460 52.381 0.00 0.00 0.00 4.30
1203 1593 3.600388 GACCACGTCCTTGATGATCTTT 58.400 45.455 0.00 0.00 0.00 2.52
1429 1969 2.125912 ACTGACGCTGACGCCATC 60.126 61.111 0.00 0.00 45.53 3.51
1430 1970 2.433145 CACTGACGCTGACGCCAT 60.433 61.111 0.00 0.00 45.53 4.40
1432 1972 4.664677 ACCACTGACGCTGACGCC 62.665 66.667 0.00 0.00 45.53 5.68
1584 2174 2.979813 CAAATCTTTTGCCTCCGTTTCG 59.020 45.455 0.00 0.00 0.00 3.46
1585 2175 2.731451 GCAAATCTTTTGCCTCCGTTTC 59.269 45.455 12.74 0.00 39.38 2.78
1586 2176 2.754472 GCAAATCTTTTGCCTCCGTTT 58.246 42.857 12.74 0.00 39.38 3.60
1587 2177 2.438868 GCAAATCTTTTGCCTCCGTT 57.561 45.000 12.74 0.00 39.38 4.44
1594 2184 7.599630 TTAATGAATGAGGCAAATCTTTTGC 57.400 32.000 14.88 14.88 44.22 3.68
1602 2192 9.685276 TCTCTCTTATTTAATGAATGAGGCAAA 57.315 29.630 0.00 0.00 33.41 3.68
1603 2193 9.685276 TTCTCTCTTATTTAATGAATGAGGCAA 57.315 29.630 0.00 0.00 33.41 4.52
1604 2194 9.334947 CTTCTCTCTTATTTAATGAATGAGGCA 57.665 33.333 0.00 0.00 33.41 4.75
1605 2195 9.553064 TCTTCTCTCTTATTTAATGAATGAGGC 57.447 33.333 0.00 0.00 33.41 4.70
1617 2207 8.661345 ACACCCTAAAACTCTTCTCTCTTATTT 58.339 33.333 0.00 0.00 0.00 1.40
1618 2208 8.208575 ACACCCTAAAACTCTTCTCTCTTATT 57.791 34.615 0.00 0.00 0.00 1.40
1619 2209 7.800300 ACACCCTAAAACTCTTCTCTCTTAT 57.200 36.000 0.00 0.00 0.00 1.73
1620 2210 7.613551 AACACCCTAAAACTCTTCTCTCTTA 57.386 36.000 0.00 0.00 0.00 2.10
1621 2211 6.502074 AACACCCTAAAACTCTTCTCTCTT 57.498 37.500 0.00 0.00 0.00 2.85
1622 2212 6.553852 TGTAACACCCTAAAACTCTTCTCTCT 59.446 38.462 0.00 0.00 0.00 3.10
1623 2213 6.756221 TGTAACACCCTAAAACTCTTCTCTC 58.244 40.000 0.00 0.00 0.00 3.20
1624 2214 6.742559 TGTAACACCCTAAAACTCTTCTCT 57.257 37.500 0.00 0.00 0.00 3.10
1625 2215 6.990939 ACTTGTAACACCCTAAAACTCTTCTC 59.009 38.462 0.00 0.00 0.00 2.87
1626 2216 6.766467 CACTTGTAACACCCTAAAACTCTTCT 59.234 38.462 0.00 0.00 0.00 2.85
1627 2217 6.764560 TCACTTGTAACACCCTAAAACTCTTC 59.235 38.462 0.00 0.00 0.00 2.87
1628 2218 6.541278 GTCACTTGTAACACCCTAAAACTCTT 59.459 38.462 0.00 0.00 0.00 2.85
1629 2219 6.053650 GTCACTTGTAACACCCTAAAACTCT 58.946 40.000 0.00 0.00 0.00 3.24
1630 2220 5.237996 GGTCACTTGTAACACCCTAAAACTC 59.762 44.000 0.00 0.00 0.00 3.01
1631 2221 5.128205 GGTCACTTGTAACACCCTAAAACT 58.872 41.667 0.00 0.00 0.00 2.66
1632 2222 4.883006 TGGTCACTTGTAACACCCTAAAAC 59.117 41.667 0.00 0.00 0.00 2.43
1633 2223 4.883006 GTGGTCACTTGTAACACCCTAAAA 59.117 41.667 0.00 0.00 0.00 1.52
1634 2224 4.080469 TGTGGTCACTTGTAACACCCTAAA 60.080 41.667 2.66 0.00 0.00 1.85
1635 2225 3.455177 TGTGGTCACTTGTAACACCCTAA 59.545 43.478 2.66 0.00 0.00 2.69
1636 2226 3.039743 TGTGGTCACTTGTAACACCCTA 58.960 45.455 2.66 0.00 0.00 3.53
1637 2227 1.841277 TGTGGTCACTTGTAACACCCT 59.159 47.619 2.66 0.00 0.00 4.34
1638 2228 1.944709 GTGTGGTCACTTGTAACACCC 59.055 52.381 2.66 0.00 40.98 4.61
1639 2229 2.353579 GTGTGTGGTCACTTGTAACACC 59.646 50.000 9.22 0.00 44.14 4.16
1640 2230 3.004171 TGTGTGTGGTCACTTGTAACAC 58.996 45.455 12.00 12.00 44.14 3.32
1641 2231 3.004171 GTGTGTGTGGTCACTTGTAACA 58.996 45.455 2.66 0.00 44.14 2.41
1642 2232 2.029970 CGTGTGTGTGGTCACTTGTAAC 59.970 50.000 2.66 0.00 44.14 2.50
1643 2233 2.272678 CGTGTGTGTGGTCACTTGTAA 58.727 47.619 2.66 0.00 44.14 2.41
1644 2234 1.471851 CCGTGTGTGTGGTCACTTGTA 60.472 52.381 2.66 0.00 44.14 2.41
1645 2235 0.742990 CCGTGTGTGTGGTCACTTGT 60.743 55.000 2.66 0.00 44.14 3.16
1646 2236 2.013807 CCGTGTGTGTGGTCACTTG 58.986 57.895 2.66 0.00 44.14 3.16
1647 2237 1.817941 GCCGTGTGTGTGGTCACTT 60.818 57.895 2.66 0.00 44.14 3.16
1648 2238 2.203015 GCCGTGTGTGTGGTCACT 60.203 61.111 2.66 0.00 44.14 3.41
1649 2239 1.891919 ATGCCGTGTGTGTGGTCAC 60.892 57.895 0.00 0.00 44.08 3.67
1650 2240 1.891449 CATGCCGTGTGTGTGGTCA 60.891 57.895 0.00 0.00 0.00 4.02
1651 2241 2.616330 CCATGCCGTGTGTGTGGTC 61.616 63.158 0.00 0.00 0.00 4.02
1652 2242 2.594303 CCATGCCGTGTGTGTGGT 60.594 61.111 0.00 0.00 0.00 4.16
1653 2243 4.041917 GCCATGCCGTGTGTGTGG 62.042 66.667 0.00 0.00 0.00 4.17
1654 2244 2.843352 TTGCCATGCCGTGTGTGTG 61.843 57.895 0.00 0.00 0.00 3.82
1655 2245 2.518112 TTGCCATGCCGTGTGTGT 60.518 55.556 0.00 0.00 0.00 3.72
1656 2246 1.233950 TAGTTGCCATGCCGTGTGTG 61.234 55.000 0.00 0.00 0.00 3.82
1657 2247 1.072332 TAGTTGCCATGCCGTGTGT 59.928 52.632 0.00 0.00 0.00 3.72
1658 2248 0.955428 AGTAGTTGCCATGCCGTGTG 60.955 55.000 0.00 0.00 0.00 3.82
1659 2249 0.673644 GAGTAGTTGCCATGCCGTGT 60.674 55.000 0.00 0.00 0.00 4.49
1660 2250 1.695893 CGAGTAGTTGCCATGCCGTG 61.696 60.000 0.00 0.00 0.00 4.94
1661 2251 1.447838 CGAGTAGTTGCCATGCCGT 60.448 57.895 0.00 0.00 0.00 5.68
1662 2252 2.813179 GCGAGTAGTTGCCATGCCG 61.813 63.158 0.00 0.00 0.00 5.69
1663 2253 2.813179 CGCGAGTAGTTGCCATGCC 61.813 63.158 0.00 0.00 0.00 4.40
1664 2254 0.804544 TACGCGAGTAGTTGCCATGC 60.805 55.000 15.93 0.00 46.88 4.06
1665 2255 3.339061 TACGCGAGTAGTTGCCATG 57.661 52.632 15.93 0.00 46.88 3.66
1674 2264 3.243501 GGGTCCATTATTGTACGCGAGTA 60.244 47.826 15.93 0.00 46.88 2.59
1676 2266 2.132762 GGGTCCATTATTGTACGCGAG 58.867 52.381 15.93 0.00 0.00 5.03
1677 2267 1.202557 GGGGTCCATTATTGTACGCGA 60.203 52.381 15.93 0.00 0.00 5.87
1678 2268 1.223187 GGGGTCCATTATTGTACGCG 58.777 55.000 3.53 3.53 0.00 6.01
1679 2269 2.218603 CTGGGGTCCATTATTGTACGC 58.781 52.381 0.00 0.00 30.82 4.42
1680 2270 3.553828 ACTGGGGTCCATTATTGTACG 57.446 47.619 0.00 0.00 30.82 3.67
1681 2271 6.599356 AAAAACTGGGGTCCATTATTGTAC 57.401 37.500 0.00 0.00 30.82 2.90
1701 2291 1.338655 GGTTCTTGCGGGTGCTAAAAA 59.661 47.619 0.00 0.00 43.34 1.94
1702 2292 0.955905 GGTTCTTGCGGGTGCTAAAA 59.044 50.000 0.00 0.00 43.34 1.52
1703 2293 0.891904 GGGTTCTTGCGGGTGCTAAA 60.892 55.000 0.00 0.00 43.34 1.85
1704 2294 1.302993 GGGTTCTTGCGGGTGCTAA 60.303 57.895 0.00 0.00 43.34 3.09
1705 2295 2.058125 TTGGGTTCTTGCGGGTGCTA 62.058 55.000 0.00 0.00 43.34 3.49
1706 2296 2.920076 TTTGGGTTCTTGCGGGTGCT 62.920 55.000 0.00 0.00 43.34 4.40
1707 2297 2.420466 CTTTGGGTTCTTGCGGGTGC 62.420 60.000 0.00 0.00 43.20 5.01
1708 2298 1.659794 CTTTGGGTTCTTGCGGGTG 59.340 57.895 0.00 0.00 0.00 4.61
1709 2299 2.200337 GCTTTGGGTTCTTGCGGGT 61.200 57.895 0.00 0.00 0.00 5.28
1710 2300 1.463553 AAGCTTTGGGTTCTTGCGGG 61.464 55.000 0.00 0.00 0.00 6.13
1711 2301 0.318955 CAAGCTTTGGGTTCTTGCGG 60.319 55.000 0.00 0.00 32.07 5.69
1712 2302 3.184094 CAAGCTTTGGGTTCTTGCG 57.816 52.632 0.00 0.00 32.07 4.85
1722 2312 0.729116 ATCGATGACGCCAAGCTTTG 59.271 50.000 0.00 0.00 39.58 2.77
1723 2313 0.729116 CATCGATGACGCCAAGCTTT 59.271 50.000 21.02 0.00 39.58 3.51
1724 2314 0.108186 TCATCGATGACGCCAAGCTT 60.108 50.000 23.99 0.00 39.58 3.74
1725 2315 0.105593 ATCATCGATGACGCCAAGCT 59.894 50.000 29.49 9.12 40.03 3.74
1726 2316 1.723542 CTATCATCGATGACGCCAAGC 59.276 52.381 29.49 0.00 40.03 4.01
1727 2317 2.983136 GACTATCATCGATGACGCCAAG 59.017 50.000 29.49 21.25 40.03 3.61
1728 2318 2.288213 GGACTATCATCGATGACGCCAA 60.288 50.000 29.49 7.49 40.03 4.52
1729 2319 1.269723 GGACTATCATCGATGACGCCA 59.730 52.381 29.49 14.09 40.03 5.69
1730 2320 1.729472 CGGACTATCATCGATGACGCC 60.729 57.143 29.49 23.54 40.03 5.68
1731 2321 1.607713 CGGACTATCATCGATGACGC 58.392 55.000 29.49 17.66 40.03 5.19
1732 2322 1.804748 TCCGGACTATCATCGATGACG 59.195 52.381 29.49 24.97 40.03 4.35
1733 2323 2.162608 CCTCCGGACTATCATCGATGAC 59.837 54.545 29.49 16.62 40.03 3.06
1734 2324 2.039879 TCCTCCGGACTATCATCGATGA 59.960 50.000 29.09 29.09 41.70 2.92
1735 2325 2.421775 CTCCTCCGGACTATCATCGATG 59.578 54.545 19.61 19.61 0.00 3.84
1736 2326 2.619332 CCTCCTCCGGACTATCATCGAT 60.619 54.545 0.00 0.00 0.00 3.59
1737 2327 1.271434 CCTCCTCCGGACTATCATCGA 60.271 57.143 0.00 0.00 0.00 3.59
1738 2328 1.169577 CCTCCTCCGGACTATCATCG 58.830 60.000 0.00 0.00 0.00 3.84
1739 2329 2.588464 TCCTCCTCCGGACTATCATC 57.412 55.000 0.00 0.00 0.00 2.92
1750 2340 3.391382 CACCACCGGTCCTCCTCC 61.391 72.222 2.59 0.00 31.02 4.30
1751 2341 3.391382 CCACCACCGGTCCTCCTC 61.391 72.222 2.59 0.00 31.02 3.71
1752 2342 4.250170 ACCACCACCGGTCCTCCT 62.250 66.667 2.59 0.00 32.11 3.69
1753 2343 4.016706 CACCACCACCGGTCCTCC 62.017 72.222 2.59 0.00 37.07 4.30
1754 2344 4.699522 GCACCACCACCGGTCCTC 62.700 72.222 2.59 0.00 37.07 3.71
1757 2347 4.250305 AGTGCACCACCACCGGTC 62.250 66.667 14.63 0.00 37.07 4.79
1758 2348 4.250305 GAGTGCACCACCACCGGT 62.250 66.667 14.63 0.00 41.07 5.28
1759 2349 3.476031 AAGAGTGCACCACCACCGG 62.476 63.158 14.63 0.00 36.38 5.28
1760 2350 2.111043 AAGAGTGCACCACCACCG 59.889 61.111 14.63 0.00 36.38 4.94
1761 2351 3.749981 CAAGAGTGCACCACCACC 58.250 61.111 14.63 0.00 36.38 4.61
1774 2364 2.654877 GGGTCTTCCGTCGCAAGA 59.345 61.111 0.00 0.00 38.37 3.02
1783 2373 1.515736 CGTAACGCTCGGGTCTTCC 60.516 63.158 0.00 0.00 0.00 3.46
1784 2374 4.068302 CGTAACGCTCGGGTCTTC 57.932 61.111 0.00 0.00 0.00 2.87
1795 2385 1.320555 CAATCTGGAACGAGCGTAACG 59.679 52.381 0.00 0.00 0.00 3.18
1796 2386 2.334838 ACAATCTGGAACGAGCGTAAC 58.665 47.619 0.00 0.00 0.00 2.50
1797 2387 2.602878 GACAATCTGGAACGAGCGTAA 58.397 47.619 0.00 0.00 0.00 3.18
1798 2388 1.135199 GGACAATCTGGAACGAGCGTA 60.135 52.381 0.00 0.00 0.00 4.42
1799 2389 0.389948 GGACAATCTGGAACGAGCGT 60.390 55.000 0.00 0.00 0.00 5.07
1800 2390 0.389817 TGGACAATCTGGAACGAGCG 60.390 55.000 0.00 0.00 0.00 5.03
1801 2391 1.734465 CTTGGACAATCTGGAACGAGC 59.266 52.381 0.00 0.00 0.00 5.03
1802 2392 3.319137 TCTTGGACAATCTGGAACGAG 57.681 47.619 0.00 0.00 0.00 4.18
1803 2393 3.762407 TTCTTGGACAATCTGGAACGA 57.238 42.857 0.00 0.00 0.00 3.85
1804 2394 3.058224 GGTTTCTTGGACAATCTGGAACG 60.058 47.826 0.00 0.00 0.00 3.95
1805 2395 3.888930 TGGTTTCTTGGACAATCTGGAAC 59.111 43.478 0.00 0.00 0.00 3.62
1806 2396 4.177537 TGGTTTCTTGGACAATCTGGAA 57.822 40.909 0.00 0.00 0.00 3.53
1807 2397 3.874383 TGGTTTCTTGGACAATCTGGA 57.126 42.857 0.00 0.00 0.00 3.86
1808 2398 3.636300 TGTTGGTTTCTTGGACAATCTGG 59.364 43.478 0.00 0.00 0.00 3.86
1809 2399 4.916983 TGTTGGTTTCTTGGACAATCTG 57.083 40.909 0.00 0.00 0.00 2.90
1810 2400 5.363580 ACAATGTTGGTTTCTTGGACAATCT 59.636 36.000 0.00 0.00 0.00 2.40
1811 2401 5.600696 ACAATGTTGGTTTCTTGGACAATC 58.399 37.500 0.00 0.00 0.00 2.67
1812 2402 5.612725 ACAATGTTGGTTTCTTGGACAAT 57.387 34.783 0.00 0.00 0.00 2.71
1813 2403 6.406400 CCTTACAATGTTGGTTTCTTGGACAA 60.406 38.462 0.00 0.00 0.00 3.18
1814 2404 5.068460 CCTTACAATGTTGGTTTCTTGGACA 59.932 40.000 0.00 0.00 0.00 4.02
1815 2405 5.508994 CCCTTACAATGTTGGTTTCTTGGAC 60.509 44.000 0.00 0.00 0.00 4.02
1816 2406 4.586841 CCCTTACAATGTTGGTTTCTTGGA 59.413 41.667 0.00 0.00 0.00 3.53
1817 2407 4.586841 TCCCTTACAATGTTGGTTTCTTGG 59.413 41.667 0.00 0.00 0.00 3.61
1818 2408 5.278957 CCTCCCTTACAATGTTGGTTTCTTG 60.279 44.000 0.00 0.00 0.00 3.02
1819 2409 4.832823 CCTCCCTTACAATGTTGGTTTCTT 59.167 41.667 0.00 0.00 0.00 2.52
1820 2410 4.407365 CCTCCCTTACAATGTTGGTTTCT 58.593 43.478 0.00 0.00 0.00 2.52
1821 2411 3.056821 GCCTCCCTTACAATGTTGGTTTC 60.057 47.826 0.00 0.00 0.00 2.78
1822 2412 2.897326 GCCTCCCTTACAATGTTGGTTT 59.103 45.455 0.00 0.00 0.00 3.27
1823 2413 2.525368 GCCTCCCTTACAATGTTGGTT 58.475 47.619 0.00 0.00 0.00 3.67
1824 2414 1.272480 GGCCTCCCTTACAATGTTGGT 60.272 52.381 0.00 0.00 0.00 3.67
1825 2415 1.272425 TGGCCTCCCTTACAATGTTGG 60.272 52.381 3.32 0.00 0.00 3.77
1826 2416 2.094675 CTGGCCTCCCTTACAATGTTG 58.905 52.381 3.32 0.00 0.00 3.33
1827 2417 1.005924 CCTGGCCTCCCTTACAATGTT 59.994 52.381 3.32 0.00 0.00 2.71
1828 2418 0.625849 CCTGGCCTCCCTTACAATGT 59.374 55.000 3.32 0.00 0.00 2.71
1829 2419 0.106519 CCCTGGCCTCCCTTACAATG 60.107 60.000 3.32 0.00 0.00 2.82
1830 2420 1.937924 GCCCTGGCCTCCCTTACAAT 61.938 60.000 3.32 0.00 34.56 2.71
1831 2421 2.612493 GCCCTGGCCTCCCTTACAA 61.612 63.158 3.32 0.00 34.56 2.41
1832 2422 3.015145 GCCCTGGCCTCCCTTACA 61.015 66.667 3.32 0.00 34.56 2.41
1833 2423 2.692741 AGCCCTGGCCTCCCTTAC 60.693 66.667 3.32 0.00 43.17 2.34
1834 2424 2.366972 GAGCCCTGGCCTCCCTTA 60.367 66.667 3.32 0.00 43.17 2.69
1841 2431 4.593864 GATCGACGAGCCCTGGCC 62.594 72.222 0.57 0.00 43.17 5.36
1842 2432 3.532155 AGATCGACGAGCCCTGGC 61.532 66.667 9.90 0.00 42.33 4.85
1843 2433 2.415010 CAGATCGACGAGCCCTGG 59.585 66.667 9.90 0.00 0.00 4.45
1844 2434 2.415010 CCAGATCGACGAGCCCTG 59.585 66.667 9.90 12.58 0.00 4.45
1845 2435 2.835431 CCCAGATCGACGAGCCCT 60.835 66.667 9.90 0.37 0.00 5.19
1846 2436 3.140225 GACCCAGATCGACGAGCCC 62.140 68.421 9.90 0.00 0.00 5.19
1847 2437 1.945354 TTGACCCAGATCGACGAGCC 61.945 60.000 9.90 0.46 0.00 4.70
1848 2438 0.526524 CTTGACCCAGATCGACGAGC 60.527 60.000 4.63 4.63 0.00 5.03
1849 2439 0.811915 ACTTGACCCAGATCGACGAG 59.188 55.000 3.01 0.00 0.00 4.18
1850 2440 1.067846 CAACTTGACCCAGATCGACGA 60.068 52.381 0.00 0.00 0.00 4.20
1851 2441 1.350193 CAACTTGACCCAGATCGACG 58.650 55.000 0.00 0.00 0.00 5.12
1852 2442 1.079503 GCAACTTGACCCAGATCGAC 58.920 55.000 0.00 0.00 0.00 4.20
1853 2443 0.389817 CGCAACTTGACCCAGATCGA 60.390 55.000 0.00 0.00 0.00 3.59
1854 2444 0.389817 TCGCAACTTGACCCAGATCG 60.390 55.000 0.00 0.00 0.00 3.69
1855 2445 1.734465 CTTCGCAACTTGACCCAGATC 59.266 52.381 0.00 0.00 0.00 2.75
1856 2446 1.611673 CCTTCGCAACTTGACCCAGAT 60.612 52.381 0.00 0.00 0.00 2.90
1857 2447 0.250295 CCTTCGCAACTTGACCCAGA 60.250 55.000 0.00 0.00 0.00 3.86
1858 2448 0.535102 ACCTTCGCAACTTGACCCAG 60.535 55.000 0.00 0.00 0.00 4.45
1859 2449 0.106918 AACCTTCGCAACTTGACCCA 60.107 50.000 0.00 0.00 0.00 4.51
1860 2450 1.029681 AAACCTTCGCAACTTGACCC 58.970 50.000 0.00 0.00 0.00 4.46
1861 2451 2.863401 AAAACCTTCGCAACTTGACC 57.137 45.000 0.00 0.00 0.00 4.02
1862 2452 4.206404 GCTTTAAAACCTTCGCAACTTGAC 59.794 41.667 0.00 0.00 0.00 3.18
1863 2453 4.356289 GCTTTAAAACCTTCGCAACTTGA 58.644 39.130 0.00 0.00 0.00 3.02
1864 2454 3.179599 CGCTTTAAAACCTTCGCAACTTG 59.820 43.478 0.00 0.00 0.00 3.16
1865 2455 3.368495 CGCTTTAAAACCTTCGCAACTT 58.632 40.909 0.00 0.00 0.00 2.66
1866 2456 2.857104 GCGCTTTAAAACCTTCGCAACT 60.857 45.455 0.00 0.00 41.84 3.16
1867 2457 1.450533 GCGCTTTAAAACCTTCGCAAC 59.549 47.619 0.00 0.00 41.84 4.17
1868 2458 1.761206 GCGCTTTAAAACCTTCGCAA 58.239 45.000 0.00 0.00 41.84 4.85
1869 2459 3.465307 GCGCTTTAAAACCTTCGCA 57.535 47.368 0.00 0.00 41.84 5.10
1870 2460 1.450533 GTTGCGCTTTAAAACCTTCGC 59.549 47.619 9.73 0.00 42.47 4.70
1871 2461 2.048498 GGTTGCGCTTTAAAACCTTCG 58.952 47.619 16.91 0.00 40.22 3.79
1875 2465 1.611977 AGGAGGTTGCGCTTTAAAACC 59.388 47.619 16.56 16.56 43.08 3.27
1876 2466 2.292292 TCAGGAGGTTGCGCTTTAAAAC 59.708 45.455 9.73 3.65 0.00 2.43
1877 2467 2.577700 TCAGGAGGTTGCGCTTTAAAA 58.422 42.857 9.73 0.00 0.00 1.52
1878 2468 2.264005 TCAGGAGGTTGCGCTTTAAA 57.736 45.000 9.73 0.00 0.00 1.52
1879 2469 2.489938 ATCAGGAGGTTGCGCTTTAA 57.510 45.000 9.73 0.00 0.00 1.52
1880 2470 3.118408 ACATATCAGGAGGTTGCGCTTTA 60.118 43.478 9.73 0.00 0.00 1.85
1881 2471 2.292267 CATATCAGGAGGTTGCGCTTT 58.708 47.619 9.73 0.00 0.00 3.51
1882 2472 1.210478 ACATATCAGGAGGTTGCGCTT 59.790 47.619 9.73 0.00 0.00 4.68
1885 2475 2.223340 GCAAACATATCAGGAGGTTGCG 60.223 50.000 0.00 0.00 0.00 4.85
1913 2504 3.176411 TGCTTGAGGAGGAGATGAAGAA 58.824 45.455 0.00 0.00 0.00 2.52
1930 2521 1.251527 ACGATCGACCAGACCTGCTT 61.252 55.000 24.34 0.00 0.00 3.91
1996 2591 7.827236 CCTCCTTTTTACAGTACCATACAATCA 59.173 37.037 0.00 0.00 0.00 2.57
1997 2592 7.282450 CCCTCCTTTTTACAGTACCATACAATC 59.718 40.741 0.00 0.00 0.00 2.67
2114 2732 8.988934 ACGAAATGCTTAGTGTATATGGTATTG 58.011 33.333 0.00 0.00 0.00 1.90
2126 2751 7.060600 TCTCAATAACACGAAATGCTTAGTG 57.939 36.000 0.00 0.00 42.15 2.74
2145 2775 3.703556 TGATGGCCAAACAAGTTTCTCAA 59.296 39.130 10.96 0.00 0.00 3.02
2172 2807 6.036735 TGTTAGTACACAACTTGAAGCAGAAC 59.963 38.462 10.57 0.00 39.80 3.01
2201 2836 1.164411 TCATGCACAAGGTTAAGCGG 58.836 50.000 0.00 0.00 0.00 5.52
2268 2903 5.048083 TCAAACAGCGCAGAAGGATTATTTT 60.048 36.000 11.47 0.00 0.00 1.82
2272 2907 3.002791 CTCAAACAGCGCAGAAGGATTA 58.997 45.455 11.47 0.00 0.00 1.75
2274 2909 1.446907 CTCAAACAGCGCAGAAGGAT 58.553 50.000 11.47 0.00 0.00 3.24
2275 2910 0.603707 CCTCAAACAGCGCAGAAGGA 60.604 55.000 11.47 0.00 0.00 3.36
2276 2911 1.580845 CCCTCAAACAGCGCAGAAGG 61.581 60.000 11.47 9.04 0.00 3.46
2277 2912 1.580845 CCCCTCAAACAGCGCAGAAG 61.581 60.000 11.47 0.00 0.00 2.85
2300 2935 3.482436 TGGGAATATTACCACGATTGCC 58.518 45.455 15.97 0.00 35.85 4.52
2336 2971 8.552034 CGTAAGATATCACCATCTTCTTTTTCC 58.448 37.037 5.32 0.00 42.83 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.