>input_sequence_80403
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------ACCCAGCCTCGACGCCGAAACAATCCACCAACCTCTCC-CTCCCTGCCC
TCCTCTCCCCCCGCCGGAAGAATGGCCACCAAGGGATACCAGGCTCCAGCTCCGGCGATGCCCGCGGCGG----------
-------------------------------------------------------GAGGGGGCGCCGGTTCCGGCA----
--GCGGCGGCGGCAACAGGGCGCCGAAGGGGAGCAT------GCCGCTGCGTCGCCGCGGCCAGGTCAAGGAAAAGATCA
TCAAGGACGTGGTCGCCGCGGTCGCCAACATGGCCGCGAGGCTCGTCCGCGCCGACAAGAACGGCACCGGCACCGGCGGT
CTCCCGGCCGCCGGCGACGCCGGCGCCAAGTGAACAGCTCC--------------------------TGTGTTCACGCC-
---------------------------CGTCCTCTGCTGCTATTCCGTGCTC------------ATTTTTTGTGCGCGCA
------------------------------------------------------------GCAAATGCCGGAGCAAAATA
CTACT---ACCGGTA---------------------TTGTTAAATTTCGATGG------C--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr1B_1_TraesCS1B01G298800
GGCCGAATGGGAGTCAGCCTGACTTAGCGAAACACATTCGGGTTGGGGTTCGCGCTTTGCTGTGGACTATCTGGACTTGC
AGAAATGATTTGGTTTTTAACAGAATATCATGTATTCACTTTTTGCAGGTTATATTCCGAACTACGGCACGGATCCGTTC
GTGGTCGCTACTCACTCCGACGGAGGCCAGAGAGCATTTGGTTACTGGATCTTTCCGCTGGGAGATGGTAGCTCGGGATA
TCTTCAACCGGTTTGGATGACGGTCATGTAATAGGATAGACATCTAGTTTACTTATCTATTGATAGCCAGCCGGTTGTGG
CCTCTTATCTTGGCTAGTCGATGTTTCTAGCCCTTCATGGCTCTGTGTGAGTTTTCTTTGCTTTTTTATTTTTTGAAGAT
ATTGGAACCTTGTTGACACTTTCTTTTTTGGTTAATAAGTAAGTTGGCCGTTTGCATCATTCTGATGCAGAGGTCGGGGA
GTCCACCTTTTTGAAAAAAAAACATGAAGATGAGGATCGATCCCGCTGATCCAATCTGCTTCTTCACTTGATTTACCTGC
ATCACTCCC--AACATCAGTGGGTGACGACTTGACGAGCGACAACGCGATACGTC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TTCATGTTTCTTCGAGAAACC-TTGCAGTACTGATTTGGCAC---------CCAAGCC-A------
--GCCACTGGCAGCAGCAGCCAACGTGGAAAGTACAAGGCGGGCCCACATCCGACCGTCCAAAATTT-AGATAGATATGC
ACGCATTCTGCCGTGCCTAGTCACTTGCACGTCCCCACCTTACACTGGGCTACCCCACCTGTCACTGAGACGTGCAAGCT
CCTGGCTGGTATAGTTCCAGCCCGAGAGCCCGAGCCCGAGGACCGCCATGTACGCTTTTGGGGCCCATGCCCGAGCGCAC
CTTACACTGG-ACCCGCCACCTCAATCTCTGCTCTTTTCCGGCCATCGCTGCGCTCTGCTC-------A--CCGCCTATT
TAATCCCGCTCTCACAGAGAACCTCGAGTATACCCAGCCTCGACGCCGAAACAATCCACCAACCTCTCC-CTCCCTGCCC
TCCTCTCCCCCCGCCGGAAGAATGGCCACCAAGGGATACCAGGCTCCAGCTCCGGCGATGCCCGCGGCGG----------
-------------------------------------------------------GAGGGGGCGCCGGTTCCGGCA----
--GCGGCGGCGGCAACAGGGCGCCGAAGGGGAGCAT------GCCGCTGCGTCGCCGCGGCCAGGTCAAGGAAAAGATCA
TCAAGGACGTGGTCGCCGCGGTCGCCAACATGGCCGCGAGGCTCGTCCGCGCCGACAAGAACGGCACCGGCACCGGCGGT
CTCCCGGCCGCCGGCGACGCCGGCGCCAAGTGAACAGCTCC--------------------------TGTGTTCACGCC-
---------------------------CGTCCTCTGCTGCTATTCCGTGCTC------------ATTTTTTGTGCGCGCA
------------------------------------------------------------GCAAATGCCGGAGCAAAATA
CTACT---ACCGGTA---------------------TTGTTAAATTTCGATGG------CGTCAGCGTCAG-------TG
GTGGACGGATTCAGTTGCCTTATTTGAGGTAGCAACTGGTCTCTTCATCCGG----T----------------------C
TCGGTGATCTTCTTGCTGC--------TGCTGGTTGGT-GGTGAAGCCTCAGCTGCTAGCATCTCGGGAGG-TTGC-GAA
GGTTTTTTTTTTCCGAAACGGAGGCAAAAGATTTGCCTCATTCATTAAATAAGAGAGAAGAGTTTTAGGGTGTTACAAGT
GACCACACACACGGCATGGCAACTACTCGCGTACAATAATGGACCCCAGTTTTTTAGCACCCGCAAGAACCCAAAGCTTG
GCGTCATCGATGATAGTCCGGAGGAGGACCGGTGGTGGTGCACTCTTGCGACGGAAGACCCGAGCGTTACGCTCGTTCCA
GATTGTCCAAGAAACCAACATTGTAAGGGAGGCCAGGGCTCGTCGATCTGGGTCAAGTTGCGAAGGTTTTAAAGCG-CAA
CCTCCTGATATGTTTGCCGCTGCTTCTTCATCTCCTCCTCAAGCAGGTCTGGTCGATCGTAGGTCTTTTCTTCAGGTTGT
GTGC----TGCTGCTTGCTTGGGTTTGATTTG----------ATT---GTATGGTACTGTAAAAAGGAGGGATGGATCAG
CAAGTATT--ATGGTCCGATCCGTCCTTCCTTGCT------TGTGTGTGTGC--GCTCCTAGTATTGTCGTTCCGTTATT
TATCAAATCATCAATACCA-------TATACACTAAGCA-TT----TCGTGTTATTGAGAAAC-----TTGTTTGGCCAT
CAGAGGGTTCTGCTTCAAGTTGTGTACTAACATTTCCGCTTAACCTTGTGCATGATGAGTGCAAAAGTTACTCCCTTTCA
ACATCATGTGTGCTGCAAGGAAAAAATAATCCTTCTGCGCTGTTTGAGGGGCAAGGCAATCGTGGTAATATTCCCAAGGG
GGGAGAAAAAG-GAAAAAGAAGATGGTGATATCTTACGACGCAAAACGCAGCTCATGATGGATCTCCCACAGGCCTCGCC
AGTCC-AAGTCAAGTCACCGCCCGCGATCAA
>chr5B_1
GGCTGAATGGGATTCAGCCTGACTTAGCGATACACATTCGGGTTGGGGTTTGCGCGTTGCTGTGGACTATCTGGACTTGC
AGAAATGATTTGGTTTTTAACAGAATATCATGTATCCACTTTTTGCAGGTTATATTCCGAACTACGGCACGGATCCG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTTGTAGTC
GCCACTCACTCCGACGGAGGCCAGGGAGCATTTGGTTACTGGATCTTTCCGTTGGGAGATGATAGCTCGGGATATCTTCA
ACCGGTTTGGATGGCGGTCATGTAATAGGATAGGCATCTAGTTTACTTATCCATTGATAGCCAGCCGGTTGTGGCCTCTT
ATCTTGACTAGTTG------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGGTTTCTAGCC-
---------------------------CTTCCTGGGCTCTGTGTGAGCTTGCTTTGCTTTTTTATTGTTTTGGAGACCTT
GGAACCTTGTTGACACTATCTTTGTTTGGTTAATAAGATGGCCGTATGCATCGTTCTGACGCAGAGGCCGGGGAATTCCC
CCTTTTC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------GAAAAAAAAAC----------------------------------------------------------
-------------------------------
>chr5A_1
GGCTGAATGGGATTGAGCCTGACTTAGCGAAACACATTCGGGTTGGGGTTTGCGCTTTGCTGTGGACTATCTGGACTTGC
AGAAATGATTTGGTTTTTAACAGAATATCATGTATTCATTTTTTGCAGGTTATATTCCGAACTACGACACTGATCCG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTCATGGTC
GCTACTCACTCCGACGGAGGCCAGGGAGCATTTGGTTACTGGATCTTTCCGCTGAGAGATGGTAGCTCGGGATATCTTCA
ACCGGTTTGGATGGCGGTCATGTAATAGGATAGGCATCTAGTTTACCTATCTATTTATAGCCAGCCGGTTGTGGCGTCTT
ATTTTGGCTAGTTG------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ATGTTTCTAGCC-
---------------------------TTTTAT-GGCTCTGTGTGAGTTTTCTTTGTTTTTTTTATTTTTTGGAGACCTT
GGAACCTTGTTGACATTACTTTTTTTTGGTTAATAAGATGGCCGTATGCATCATTCTGATGCAGAGGCCGGGGACTCCCC
CCTTTTC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------GAGAAAAAAAATGAA------------------------------------------------------
-------------------------------
>chr1A_502
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------ACATGGAGATGCGGATCGATCCCGCAGATCCAATCTGCTTCTTCCCATGAATTCCCTGC
ATCACTCCTAAAACATCAGTGTGTGACGACTTGACGAGCGACAACGCGATACGTC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TTCAGGTTCCTTCGAGAAACC-TTGCAGTACTGACTTGCCAT---------CCAAGCCTA------
--GCCACTAGCAGCAGCAGCCAACGTGGAAAGTACAAGGTGGGCCCACAGCCGACCGTCCAAAATTT-AGATA----TGC
ACGCATTC-GCCGTGCCGAGTCA----------------------CTGGCTACCCCACCCGTCACTGAGACGTGCAATCT
CCTGCCTGGTT--------------GAGCCCGAGC-------CCG----ATACGCTTTTGGGGCCCACGCCGGAGCGCGC
TTTT----GGG----GCC------ACCTCTGCCCTTTTCCGGCCATCGCTGCGCTCTGCTCTCTCCCGGCTACGCCTATA
TAATCCCCCTCGCAGACAGAACCTGGAGTATATCCAGCCTCGACGGCGAAACAATCCACCAACCTCTCGTCCTCT-----
-------CCCCCGCCGGAAGAATGGCCACCAAGGGCTACCAGGCTCCAGCTCCGGCGATGGCCGCGGCGG----------
-------------------------------------------------------GAGGGGGCGCCGGTTCCGGCGGCGA
CGGCGGCGACGGCAACAGGGCGCCGAAGGGGAGCAA------GCCGCGG------CGTGGACAGGTCAAGGAGAAGATCA
TCAAGGACGTGGTCGCCGCGGTCGCCAACATGGCCGCGGGGCTCGTCCGCGCCGACAAGAACGGCACCGGCACCGGCGGT
CTCCCGGCCGCCGGCGACGCCGGTGCCAAGTGAACAGCCCC--------------------------TGTGTTCACGCC-
---------------------------CGTCCTCTGCTGCTACTCCGTGCTC------------ATTTTTTGTGCGCGCA
------------------------------------------------------------GCAGATGCCGGAGCAAAATA
CTACTACTACCGGTA---------------------TTGTTAAATTTCCGTCGCGTCAGCGTCAGCGTCAG-------TG
GTGGGCGGATTCAGTTGCCTTATTTGAGGTAGCAACTGGTCTCTTCATCCGG----T----------------------C
TCGTTGATCGTCTTGCTGC--------TGCTGGTTGGT-GGTGAAGTCTCGGCTGCTAGCATCTCGGGAGG-TTGC-GAA
GGTTTTTT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AGTGCCAA
CCTCCTCATATGTTTGCCGCTGCGTCTTCATCTCCTCCTCGAGCAGGCCTGGTCGATCGTAGGTCTTGTCTTCAAGTTGT
GTGC----TGCTGCTTGCTTGGGCTTGATTGTGTGCTCGTGTATGT---TACGGTACTGTAAAATGAAGGGATGGATCAG
CGAGTATT--ATGGTCCGATCCATCCTTCCTTGCT------TGTGTGTGTGTGTGCTCGTAGTATTGTGGTTCCCTTCTT
TATCAAATCAATACTATATATAG-----TATACTAAGCA-TT----TCGTGTTACTGAGGAAC-----TGGTTTGGCCAT
CAGAGGATTCTGCTTCAAGTTGTGTACTAACATTTTTGCTTACCCCTGTGCATTATGAGTGCAAAAGTTACTCCCTTTCA
ACATCA--------------------------------------------------------TGGTAATATCCCCAAAGG
GGAACAAAAAACGAAAAAGAAGATGGTGATATCTTACGACGCAAAACGCAGCTCATGATGGATCTCCCACAGGCCTCGAT
AGTCCAAAGTCAAGTCACCGCCCGCGATCAA
>chr1D_503
GACTTGACGAGCGACAGCGCGATACGTCTTCATGTTTCTTCGAGAAACCTTGCACTGCTGAGCCACTAGCAGCAGCAGCC
AACGTGGAAAGTACAAAGCGGGCCCACAATTCTATATGTCATGTGAACGCGCCTTTCTCCGATCGAGGTGCCAATCGGCC
GGCCGCCCCCATCCACAGCTCAAGCTAGCACTTGGTGGTAATGAAAGCGAGAGCACGTCCGCGCATGA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AGATGCGGATCGATCCCGCAAATCCAATCTGCTTCTTCCCATGATTTTCCTGC
ATCACTCCC--AACATCAGTGGGTGACGACTTGACGAGCGACAACGTGATAGTACGTCTTCAGACTAGCCACAGTGGGAG
TAACTTCGGTAGTAACATCGAGTCCAACTCAGCAATTTTGCTTATGTGGCAATGAGTTAATGAGGAGAGATGTAGTACTA
GTAACTTAGCTAGTTACTGTAACATCACATGTCCCAATGCAATATGAATCTATAATGTAATAAATGAAGCTTTGCATGTT
ACCACACTTATGCTACTACCCACTATTGAGGTAGTAACATAGAGTACTAACATGGGCATGTTACTACTCTATGTTACTAC
CCATTGTGGCTAGTCCCAGGTTCCTTTGGGAAAGC-TTGCAGTACTGACTTGCCAT---------CCAAGCC-A------
--GCCACTAGCAGCAGCAGCCAACGTGGAAAGTACAAAGCGGGCCCACATTCGACCGTCCAAAATGT-AGATA----TGG
ACGCATTCTGCCGTGCCGAGTCACTGGCACGTCCCCACCTTACACCGGGCTACCCCACCCGTCACTGAGACGC--AATCT
CCTGCCTGGTT--------------GAGCCCGAGC-------CTG----ATACGCTTTTGGGGCCCACGCCCGAGCGCGC
TTTT----GGGACCCGCC------ACCAGTGCTCTTTTCCGGCCAACGCCGCGCTCTGCTCCCCGGCTA--CCGCCTATT
TAATCCCGCTCTCAGAGAGAACCTGGAGTATACCCAGCCTCGACGGCGAAACAATCCACCAACCTCTCC-CCT-------
-----------CGCCGGAAGAATGGCCACCAAGGGATACCAGGCTCCAGCCCCGGCGATGCCCGCGGCGG----------
-------------------------------------------------------GAGGGGGCGCCGGTTCCGGCGGCGG
CGGCGGCAGCGACAACAGGGTGCCGAAGGGGAGCAT------GCCGCTGCGTCGCCGCGGCCAGGTCAAGGAGAAGATCA
TCAAGGACGTGGTCGCCGCGGTCGCCAACATGGCCGCGGGGCTCGTCCGCGCCGACAAGAACGGCGCCGGCACCGGCGGT
CTCCCGGCCGCCGGCGACGCCGGTGCCAAGTGAACAGCTCC--------------------------TGTGTTCACGCC-
---------------------------CGTCCTCTGCTGCTACTCCGTGCTC------------ATTTTTTGTGCGCGCA
------------------------------------------------------------GCAGAGGCCGGAGCAAAATA
CTACTACTACCGGTA---------------------TTGTTAAATTTCCGTCG------CGTCGGCGTCAG-------TG
GTGGGCGGATTCAGTTGCCTTATTTGAGGTAGCAACTGGTCTCTCCATCCCTAGTTT----------------------C
TCGATGATCTTCTCGCTGC--------TGCTGGTTGGT-GATGAAGCCTCAGCTGCTGGCATCTCGGGGGC--TGC-GAA
TGTTTTTT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AGTGCCAA
CCTACTGATATGTTTGCCGCTGCGTCTTCATCTCCTCCTCGAGCAGGTCTGGTCGATCGTACGTCTGGTCTTCAGGTTGT
GTGC----TGCTGCTTGCTTCGGTTTGATTGTGTTGTGTGCTTGT---GTACGGTACTGTAAAAAGGAGGGATGGATCAG
CAAGTATTTTATGGTCCGATCCGTCCGTCCTTGCTTGTGTGTGTGTG--------CTCCTAGTATTATGGTTCCGTTCTT
TATCAAAACATAAATACTA-------TATATACTAAGCA-TT----TCGTGTTAATGAGAAAC-----TTGTTTGGCCAT
CAGAGGATTCTGCTTCAAGTTTTGTACTAACATTTTCGGGTAACCTTGTGCATGATGAGTGCAAAAGTTACTCCCTTTCA
ACATCATGTGTGCTGCAAGGAAGAAAAATAT-TTCTGCGCTGTTTGAGGGGCAATGCAATCGTGGTAATATTCCCAAGGG
GGGAGAAATAAGAAAAAAAAAGATGGTGATATCTTACGACGCAAAGCGCAGCTCATGATGGATCTCTCACAGGCCTCGCC
AGTCC-AAGTCAAGTCACCGCCCGTGATCAA
>chr1D_561
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
ATCACTCGC--AATATCAGCAAGTGACGACTTGGCGAGCGAGAAGGCGATACGTC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TCCAGGTTCATTCGAGAAACC-TTGCATTACCGACTTGCCAT---------CCAAGCCGTCCAGAC
TTGCCACTAGCAGCAGCGCCCAGCATAGAAAGTACAAGGCGGGCCCACAATCGACCGTCCAAAATTT-AGATG----TGG
ACGCGTACTGCCGTGCCGAGTCACTGGCACGTCCCCACTTGACACCTGGCTACCCCACCTGTCACTGAGACGCGCGAGCT
CCTGGCTGGGA---------------AGCCCGAGC-------CCGCCATATACGCTTTTGGGTCCCATGCCCGAGCGCGC
TTTG----GG-ACCCGCC------ATCTCTGCTCTTTTCCGGCCATCGCTCTGCTCTCTGGGCA--CACAGCCGTCTATT
TAACCGGTCTCGGACCGCAG-CCTGGAGAATATCCAGTCTCGACGGCGAAAAAATCCACCAACCTCTCCCCTCCCTGCCC
TCCTCTCGCCCCGCCGGAAGAATGGCCACCAAGGGCTACCAGGCTCAAGCCCCGGCGATGCCCGCGGCGG----------
-------------------------------------------------------GAGGGTCCGCCGGCTCCGGCGGC--
----------GGCAACAAGGCGCCGACGGGGAGCAC------GCCGAGG------CGCGGCCAGATCAAGGAGAGGATCA
TCAAGGACGTGATCACCGCGGTCACCAACCTGGCCGCCGGGCTCGCCCGCGCCGACAAGAACGGCACCGGCACCGGCGGC
CTCCCGGCCGCCGGCGACGCCGACGCCAAGTGAACAGCCCCCGTTCTCCTGCAGCCGCT----------------CGCC-
---------------------------CGTCGTCTGCTGCTACTCTGTGCTC------------ATTTTA-GTGCACGCG
------------------------------------------------------------GCAGAGGCCGGAGCAAAA--
-TACTACTCCTACTAGTATTGTTA----------------TAAATTTCCGTCG------CGTCGGCGTCAG-------TG
GTGGGCGGATTCAGTTGCCTTATTTGAGGTAGCAACTGCTCTCTCCATCCCTAGTTTCTGAGTCTTGAGCTGGGTCCGTC
TTGGTGATCTTCTTGCCGCTGGTT--------GTTGGT-GGTGAAGTCTTAGCTGCTAGCATCTCGGGAGG-TTGC-GAA
AGTTTTAA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AGTG-CAA
CCTCCCGATATGTTTGCCGCTGCGTCTTCATCTCCTCGTCGAGCAGGTCTGGTCGATCGTAGCCA-GGTCTTCAGGTTGT
GTGC----TGCTGCTTGCTTGGGTTTGATT-----GTGTGCTTGT---GTACGGTACTGTAAAAAGGAGGGACGGATCAG
CGAGTATT--ATGGTCCGACCCGTCTTTCCTTGCT------TGTGTG--------CTCCTAGTATTGTGGTTCCCTTCTT
G-TGAAATCAGTAATACCGTACTGGTTATATATTAAGCATTT----TCGTGTTAATTAGAAACCCGTTTGATTTGGCCAC
CGGAGGATTCTGCTTCAAGTTTTATC---ACGTTTTTGCTTGACCTCTGCAT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr1A_581
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GTGACGACTTGGCGAGCGAGAACGCGATACGTC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------CCCAGGCTCCTTCGAGAAACCTTTGCACTACCGACTTGCCATCCAAGCCAGCCAAGCCGTCCGGAC
TTGCCACTAGCAGCAGCGCCCAGCATAGAAAGTACAAGGCGGGCCCACAATCGACCGTCCAAAATGC-AGATA----TGG
ACGCGTT-----GTGCCGAGTCACTGGCACGTCCCCACTTGACACCTGGCTACCCCACCCGTCACTGAGACGCGCGAGCT
CCTGGCTGGTT--------------GAGCCCGAGC-------CCGACATGTACGCTTTTGGGTCCCATGCCCGAGCGCGC
TTTG----GG-ACCCGCC------ACCTCTGCTCTTTTCCGGCCATCGCACTGCTCCCTGCCCACGCACAGCCGCCTATT
TAACCGGTCTCGGACCACAG-CCTGGAGGAT----------------------ATCCACCAACCTCTCCCCTCCCTGCCC
TCCTCTCCCCCCGCCGGAAGAATGGCCACCAAGGGCTACCAGGCTCAAGCCCCGGCGATGCCCGCGGCGG----------
-------------------------------------------------------GAGAGCGCGCCGGCTCCGGCGGC--
----------GGCAACAAGGCGCCGACCGGGAGCAC------GCCGAGG------CGCGGCCAGATCAAGGAGAAGATCA
TCAAGGACGTGATCACCGCGGTCACCAACCTGGCCGCCGGGCTCGTCCGCGCCGACAAGAACGACGCCAGCACGGGCGGT
CTCCCGGCCGCCGGCGACGCCGACGCCAAGTGAACCGCCCCCGTTCTCCTGCAGCCGCT----------------CGCC-
---------------------------CGTCCTCTGCTGCTACTCTGTGCTC------------ATTTTA-GTGCGCGCA
------------------------------------------------------------GCAGAT-CCGGAGCAAAA--
-TACTACTACCGGTA---------------------TTGTTAAATTTCCGTCG------CGTCAGCGTCAG-------CG
GTGGGCGGATTCAGTTGCCTTATTTGAGGTAGCAGCTGGTCTCCCCATCCCTAGTTTCTGCGTCTTGAGCTGGGTCCGCC
TCGGTGATCTTCTTCCTGCTGCTGGAGTGCTGGTTGGT-GGTGAAGCCTCAGCTGCTGGCATCTCGGGAGG-TTTGGGAA
GGTTTTTT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr1B_670
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GCAGCAGCGCCCAGCATAGAAAGTACAAGGCGGCCCCACAATCGACCGTCCAAAAATTTAGATG----TGG
ACGCTCT-----CTGCCGAGTCACTGGCACGTCCCCACTTGCCACCTGGCTACCCCACCTGTCACTGAGACGCGCGAGCC
CCTGGCCAGTA---------------AGCCCGAGC-------CCGCCATATACGCTTTTGGGTCCCATGCCCGAGCGCGC
TTTG----GG-ACCCGCC------ATCTCTGCTCTTTTCCGGCCATCGCTCTGCTCTCTGCCCACGCACACCCGCCTATT
TAACCGGTCTCGGATCGCAG-CGTGGAGGATACCCAGCCTCGACGGCAAAACAATCCACCAACCTCTCCCCT-----CCC
TCTTCTCCCCCCGCCGGAAGAATGGCCACCAAGGGCTACCAGGCTCAAGCTCTGGCGATGCCCGCGGCGG----------
-------------------------------------------------------GAGAGCGCGCCGGTTCCGGCGGC--
----------GGCAAAAAGGCGCCGACGGGGAGCACGTCGCTGCCGAGG------CGTGGCCAGATCAAGGGGAAGATCA
TCAAGGATGCGGTCGCCGTGGTCGCCAGCCTTGCCGCGGGGCTCGTCCGCGCCGACAATAACGGGGCCGGCGGCGGCGGT
CTTCCGGCCGCCGGCGACGCCCACGCCAAGTGAACCGCCCCCGTTCTCCTCCACCCGCTAAGGTCGATGTGCTCTCGTC-
---------------------------GGTCCTCTGTTGCTACTCTGTGCTC------------GTTTTA-GTGCACGCA
------------------------------------------------------------GCAGAGGCCGGAGCAAAA--
-TACTACTACCGGTA---------------------TTGTTAAATTTCCGTCG------CGTCAGCGTCAG-------CG
GTGGGCGGATTCAGTTGCCTTATTTGAGGTAGCAACTGATCTCTCCGTCCCTAGTTTCTGCGTCTTGAGCTGGGTCCGTC
TCGTTGATCTTCTTGCTGCTGCTG--------GTTGGTGGGTGAAGCCTCAGCTGCTAGCATCTCGGGAGA-TTGC-GAA
TGTTTTAA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AGTG-CAA
CCTCCTCATATGTTTGCCGCTGCGTCCTCATCTCCTCCTCGAGCAGGTCTGGTCGATCGTAGGTCTTTTCTTCAGGTTGT
GTGC----TGCTGCTTGCTTGGGTTTGGGTGTGTGCTCGTGTATGGGAGTATGGTACTGTAAAAAGGAGGGACGGATCAG
CAAGTATT--ATGGTCCGATCCGTCCTTCCTTTCT------TGTGTGTGTGC----TTCTAGTATTATGGCCCGTTC--T
TATCAAATCAATACTACTGGTTAC--TATATCTTAAGCATCTGGGATCGTGTTGATTAGAAACCCGTTTGATTTGGCCAC
CGGAGGATTCTGCTTCAAGTT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr1B_1063
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------CGGAAGAATGGCCACCAAGGGCTACCAGGCTCAAGCACCGGCGATGCCCGCGGCGG----------
-------------------------------------------------------GAGGGCCCGCCGGCTCCGGCGGC--
----------GGCAACAAGGCGCCGACGGGGAGCACGTCCCTGCCGAGG------CGCGGCCAGATCAAGGAGCGGATCA
TCAAGGACGTGATCACCGCGGTCACCAACCTGGCCGCCGGGCTCGTCCGCGCCGACAAGAACGGCGCCGGCACCGGCGGT
CTCCCGGCCGCCGGCGACGCCGACGCCAAGTGAACCACCCCCGTTCTCCTCCACCCGCT----------------CGCTC
GGTGTGCTCTCCTTGCCTCGTCGATCTCGTCCTCTGTTGCTACTCTGTGCTC------------ATTTTA-GTGCGCGCA
------------------------------------------------------------GCAGAGGCCGGAGCAAAA--
-TACTACTACTACTACTCTGTGCTCATTGTAGTAGTTTGTTAATTTTCCGTCG------CGTCAGCGTCAGTACTCAGTG
GTGGATGGATTCAGTTGCCTTATTAGAGGTAGCAACTGGTCTCCCCATCCGTAGTTTCTGCGTCTTGAGCTGGGTCCGCC
TCGGCGATCTTCTTGCTGC--------TGCTGGTTGGT-GGTGAAGCCTCAGCTGCTAGCATCTCGGGGGGCTTGC-CAA
GGTTTTTT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AGTG-CGA
CCTCCCGATATGTTT-CCGCTGCGTCTTCATCT---CCTCGAGCTGGTCTGGTCGATCGTAGCCA-GGTCTTCAGGTTGT
GTCTTGTGTGCTGCTTGCTCGGGTTTGGTTGTGTGCTCGTGTATG---GTATGGTACTGTAAAAAGGAGGGACGGATAAG
CAAGTATT--ATGGTCCGATCCGTCCTTCCTTTCT------TGTGTGTGTGC----TTCTAGTATTATGGTCCGTTC--T
TATCAAATC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>SNPs
---S----------------------------------------------S-----------------------------
-----------------------------------------------------------------------------SS-
-SSSS-S-SSS--SSSSSSS-SSSSSSSSSSSS-SSSS-SS-S-SS-SSSSSSSS--SSS-SSS---SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS-----S-----S-------------S------------------S-S------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S---S-------------------------S---S--S------------------------
--------S----------------------------------------------------------------SSSS---
-----------------S-------S-------------------S----------------------------------
-----------SSSSSSSSSSSSSS----------SSSSSSS------------------------------------S-
S--SSSSS----------SSSSSS--------------------------------------------------------
------------------------S--------------------S----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
------------------------------------------------------------------------S-------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
---------------------------------------------------------------S----------------
------------------------------------------------SS-S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-----
-----------------------S----------------S---------------------------------------
------------------------------SS------------------------------------------------
--------------------------------------------------------------------S--------S--
-----------S------------------S-----------------------S-------------------------
------S----------------------------S--------------------------------------------
----------------------S---S-SSSS----------------------S-------------------------
----------S---------------------------------------------------------------------
-------------------------------
>forward_493
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TCGGGGA
GTCCACCTTTTTG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>reverse_2315
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------AGCTTG
GCGTCATCGATGAT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
