Multiple sequence alignment - TraesCS1B01G270800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G270800 chr1B 100.000 3272 0 0 1 3272 476032099 476035370 0.000000e+00 6043.0
1 TraesCS1B01G270800 chr1B 100.000 174 0 0 3637 3810 476035735 476035908 4.750000e-84 322.0
2 TraesCS1B01G270800 chr1B 90.306 196 18 1 3077 3271 59636900 59637095 4.880000e-64 255.0
3 TraesCS1B01G270800 chr1B 100.000 35 0 0 928 962 11124097 11124063 8.830000e-07 65.8
4 TraesCS1B01G270800 chr1B 97.368 38 1 0 924 961 172011109 172011146 8.830000e-07 65.8
5 TraesCS1B01G270800 chr1B 100.000 35 0 0 927 961 594834406 594834372 8.830000e-07 65.8
6 TraesCS1B01G270800 chr1D 89.930 1708 126 31 1136 2820 354507530 354509214 0.000000e+00 2159.0
7 TraesCS1B01G270800 chr1D 87.711 415 25 10 441 847 354505239 354505635 9.640000e-126 460.0
8 TraesCS1B01G270800 chr1D 91.641 323 21 2 1 317 354504778 354505100 3.490000e-120 442.0
9 TraesCS1B01G270800 chr1D 91.566 166 13 1 3646 3810 209507173 209507008 1.060000e-55 228.0
10 TraesCS1B01G270800 chr1D 95.775 71 2 1 3011 3080 354515665 354515735 3.110000e-21 113.0
11 TraesCS1B01G270800 chr1D 81.982 111 4 5 1018 1128 354507398 354507492 3.160000e-11 80.5
12 TraesCS1B01G270800 chr1D 100.000 35 0 0 928 962 50209916 50209882 8.830000e-07 65.8
13 TraesCS1B01G270800 chr1A 94.522 931 44 6 1136 2060 454335598 454336527 0.000000e+00 1430.0
14 TraesCS1B01G270800 chr1A 90.780 423 25 9 2406 2820 454339273 454339689 1.550000e-153 553.0
15 TraesCS1B01G270800 chr1A 89.559 431 37 5 441 867 454334902 454335328 1.200000e-149 540.0
16 TraesCS1B01G270800 chr1A 91.870 369 18 3 2056 2414 454338506 454338872 4.390000e-139 505.0
17 TraesCS1B01G270800 chr1A 91.331 323 22 3 1 317 454334441 454334763 1.630000e-118 436.0
18 TraesCS1B01G270800 chr1A 94.245 139 6 2 306 442 454334801 454334939 1.070000e-50 211.0
19 TraesCS1B01G270800 chr1A 91.262 103 9 0 2970 3072 454340108 454340210 1.430000e-29 141.0
20 TraesCS1B01G270800 chr7D 93.194 191 13 0 3081 3271 555227013 555227203 8.060000e-72 281.0
21 TraesCS1B01G270800 chr7D 88.725 204 22 1 3068 3271 430991131 430991333 8.170000e-62 248.0
22 TraesCS1B01G270800 chr7D 93.836 146 9 0 3656 3801 186800263 186800408 1.780000e-53 220.0
23 TraesCS1B01G270800 chr7D 100.000 30 0 0 779 808 52689759 52689788 5.320000e-04 56.5
24 TraesCS1B01G270800 chr3B 92.228 193 15 0 3078 3270 744513127 744513319 1.350000e-69 274.0
25 TraesCS1B01G270800 chr3B 94.079 152 9 0 3659 3810 240266484 240266333 8.230000e-57 231.0
26 TraesCS1B01G270800 chr3B 92.105 152 12 0 3659 3810 456107416 456107265 8.290000e-52 215.0
27 TraesCS1B01G270800 chr3B 100.000 35 0 0 927 961 696325241 696325275 8.830000e-07 65.8
28 TraesCS1B01G270800 chr3A 90.722 194 18 0 3078 3271 707134475 707134668 3.780000e-65 259.0
29 TraesCS1B01G270800 chr2A 90.769 195 17 1 3078 3271 73282771 73282577 3.780000e-65 259.0
30 TraesCS1B01G270800 chr2A 90.052 191 19 0 3081 3271 524838073 524837883 8.170000e-62 248.0
31 TraesCS1B01G270800 chr5D 90.155 193 19 0 3079 3271 362893484 362893676 6.320000e-63 252.0
32 TraesCS1B01G270800 chr2D 89.691 194 20 0 3078 3271 460567856 460567663 8.170000e-62 248.0
33 TraesCS1B01G270800 chr2D 93.258 89 6 0 3659 3747 460567555 460567467 8.590000e-27 132.0
34 TraesCS1B01G270800 chr7B 92.903 155 11 0 3656 3810 709839874 709840028 3.830000e-55 226.0
35 TraesCS1B01G270800 chr7B 92.000 150 12 0 3661 3810 417609560 417609411 1.070000e-50 211.0
36 TraesCS1B01G270800 chr7B 100.000 35 0 0 928 962 516293756 516293790 8.830000e-07 65.8
37 TraesCS1B01G270800 chr2B 88.514 148 14 1 3665 3809 43628713 43628566 3.910000e-40 176.0
38 TraesCS1B01G270800 chr5B 88.079 151 12 3 3660 3810 668812938 668812794 1.410000e-39 174.0
39 TraesCS1B01G270800 chr4B 90.000 50 5 0 912 961 27766929 27766978 8.830000e-07 65.8
40 TraesCS1B01G270800 chr6B 95.122 41 1 1 921 961 551542719 551542680 3.180000e-06 63.9
41 TraesCS1B01G270800 chr3D 91.304 46 4 0 916 961 5341769 5341814 3.180000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G270800 chr1B 476032099 476035908 3809 False 3182.500000 6043 100.000000 1 3810 2 chr1B.!!$F3 3809
1 TraesCS1B01G270800 chr1D 354504778 354509214 4436 False 785.375000 2159 87.816000 1 2820 4 chr1D.!!$F2 2819
2 TraesCS1B01G270800 chr1A 454334441 454340210 5769 False 545.142857 1430 91.938429 1 3072 7 chr1A.!!$F1 3071

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
897 1278 0.031616 AAGTTTTCCCCACCCAGCAA 60.032 50.0 0.0 0.0 0.0 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2821 6980 0.174162 ATCAATTTTGCCGGCAGCTC 59.826 50.0 30.75 0.0 44.23 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 4.304413 AGCCCATGGGTTGCAGCA 62.304 61.111 31.58 0.00 37.65 4.41
78 79 0.756442 TTGCAGCAGGCTCCAGTTTT 60.756 50.000 0.00 0.00 45.15 2.43
102 103 4.276926 GCTGATTCAGTTTTGACAGAAGGT 59.723 41.667 14.90 0.00 32.11 3.50
144 148 3.439440 AACCCAAGTTCTTCAGCCC 57.561 52.632 0.00 0.00 0.00 5.19
179 186 1.675641 CTTTGCTCCCCTCCCAACG 60.676 63.158 0.00 0.00 0.00 4.10
236 243 4.974368 TGGCACCCTTATGTTAAATTCG 57.026 40.909 0.00 0.00 0.00 3.34
274 281 5.525378 CACCAAAGCAGAACATAGGAGATAC 59.475 44.000 0.00 0.00 0.00 2.24
275 282 5.189736 ACCAAAGCAGAACATAGGAGATACA 59.810 40.000 0.00 0.00 0.00 2.29
308 315 2.032924 CCAAGACACTTCGTTCCAAACC 59.967 50.000 0.00 0.00 0.00 3.27
359 417 3.489355 TGGATGCTGCGGATGAATTTAT 58.511 40.909 0.00 0.00 0.00 1.40
361 419 4.696877 TGGATGCTGCGGATGAATTTATAG 59.303 41.667 0.00 0.00 0.00 1.31
403 462 4.643334 AGTAGAAACCCAAGTGTTGTTTCC 59.357 41.667 14.90 6.21 45.58 3.13
454 513 2.828549 GGGGGCTGCCGTGTAATG 60.829 66.667 13.40 0.00 0.00 1.90
455 514 3.518068 GGGGCTGCCGTGTAATGC 61.518 66.667 13.40 0.00 0.00 3.56
456 515 2.438434 GGGCTGCCGTGTAATGCT 60.438 61.111 13.40 0.00 0.00 3.79
457 516 2.046285 GGGCTGCCGTGTAATGCTT 61.046 57.895 13.40 0.00 0.00 3.91
458 517 1.429423 GGCTGCCGTGTAATGCTTC 59.571 57.895 1.35 0.00 0.00 3.86
459 518 1.305219 GGCTGCCGTGTAATGCTTCA 61.305 55.000 1.35 0.00 0.00 3.02
460 519 0.521291 GCTGCCGTGTAATGCTTCAA 59.479 50.000 0.00 0.00 0.00 2.69
461 520 1.133025 GCTGCCGTGTAATGCTTCAAT 59.867 47.619 0.00 0.00 0.00 2.57
462 521 2.415893 GCTGCCGTGTAATGCTTCAATT 60.416 45.455 0.00 0.00 0.00 2.32
463 522 3.173599 CTGCCGTGTAATGCTTCAATTG 58.826 45.455 0.00 0.00 0.00 2.32
464 523 2.556189 TGCCGTGTAATGCTTCAATTGT 59.444 40.909 5.13 0.00 0.00 2.71
465 524 3.005261 TGCCGTGTAATGCTTCAATTGTT 59.995 39.130 5.13 0.00 0.00 2.83
466 525 3.608073 GCCGTGTAATGCTTCAATTGTTC 59.392 43.478 5.13 0.00 0.00 3.18
467 526 4.615912 GCCGTGTAATGCTTCAATTGTTCT 60.616 41.667 5.13 0.00 0.00 3.01
468 527 5.460646 CCGTGTAATGCTTCAATTGTTCTT 58.539 37.500 5.13 0.00 0.00 2.52
469 528 5.920273 CCGTGTAATGCTTCAATTGTTCTTT 59.080 36.000 5.13 3.71 0.00 2.52
470 529 6.420604 CCGTGTAATGCTTCAATTGTTCTTTT 59.579 34.615 5.13 0.00 0.00 2.27
524 583 1.687123 AGCTAACGATATCCGCCTTGT 59.313 47.619 0.00 0.00 43.32 3.16
552 618 6.669631 ACCAAATTGTTTAGGGGGAGTATAG 58.330 40.000 0.00 0.00 0.00 1.31
638 704 2.335681 TGGTCATCCAAGGGACACTA 57.664 50.000 0.00 0.00 41.25 2.74
777 848 8.523658 TCTTCCCTGATAACATTCGATATGTAG 58.476 37.037 11.79 7.17 0.00 2.74
819 890 3.943671 TGGAACATAAGGGGTACATGG 57.056 47.619 0.00 0.00 0.00 3.66
847 918 7.490840 TCTTTTTCAAACATCTGAAATGCTCA 58.509 30.769 0.00 0.00 43.12 4.26
868 1249 9.761504 TGCTCAAAATACAAATGAATTCTTTGA 57.238 25.926 24.60 18.68 37.12 2.69
882 1263 7.610865 TGAATTCTTTGAAACCAAGTCAAGTT 58.389 30.769 7.05 0.00 36.41 2.66
883 1264 8.093927 TGAATTCTTTGAAACCAAGTCAAGTTT 58.906 29.630 7.05 0.00 38.85 2.66
884 1265 8.846943 AATTCTTTGAAACCAAGTCAAGTTTT 57.153 26.923 0.00 0.00 36.36 2.43
886 1267 6.394809 TCTTTGAAACCAAGTCAAGTTTTCC 58.605 36.000 0.00 0.00 36.36 3.13
887 1268 4.729227 TGAAACCAAGTCAAGTTTTCCC 57.271 40.909 0.00 0.00 36.36 3.97
888 1269 3.449377 TGAAACCAAGTCAAGTTTTCCCC 59.551 43.478 0.00 0.00 36.36 4.81
890 1271 2.384828 ACCAAGTCAAGTTTTCCCCAC 58.615 47.619 0.00 0.00 0.00 4.61
891 1272 1.686587 CCAAGTCAAGTTTTCCCCACC 59.313 52.381 0.00 0.00 0.00 4.61
893 1274 0.930726 AGTCAAGTTTTCCCCACCCA 59.069 50.000 0.00 0.00 0.00 4.51
894 1275 1.133482 AGTCAAGTTTTCCCCACCCAG 60.133 52.381 0.00 0.00 0.00 4.45
895 1276 0.469144 TCAAGTTTTCCCCACCCAGC 60.469 55.000 0.00 0.00 0.00 4.85
896 1277 0.758685 CAAGTTTTCCCCACCCAGCA 60.759 55.000 0.00 0.00 0.00 4.41
897 1278 0.031616 AAGTTTTCCCCACCCAGCAA 60.032 50.000 0.00 0.00 0.00 3.91
898 1279 0.031616 AGTTTTCCCCACCCAGCAAA 60.032 50.000 0.00 0.00 0.00 3.68
899 1280 0.833949 GTTTTCCCCACCCAGCAAAA 59.166 50.000 0.00 0.00 0.00 2.44
905 1286 1.457455 CCACCCAGCAAAACCAGGT 60.457 57.895 0.00 0.00 0.00 4.00
906 1287 0.178975 CCACCCAGCAAAACCAGGTA 60.179 55.000 0.00 0.00 0.00 3.08
911 1292 1.256812 CAGCAAAACCAGGTAAGGGG 58.743 55.000 0.00 0.00 0.00 4.79
920 1301 3.817959 ACCAGGTAAGGGGTAATTGGTA 58.182 45.455 0.00 0.00 35.80 3.25
921 1302 4.185518 ACCAGGTAAGGGGTAATTGGTAA 58.814 43.478 0.00 0.00 35.80 2.85
922 1303 4.607141 ACCAGGTAAGGGGTAATTGGTAAA 59.393 41.667 0.00 0.00 35.80 2.01
923 1304 4.951715 CCAGGTAAGGGGTAATTGGTAAAC 59.048 45.833 0.00 0.00 0.00 2.01
924 1305 5.516945 CCAGGTAAGGGGTAATTGGTAAACA 60.517 44.000 0.00 0.00 0.00 2.83
925 1306 5.650703 CAGGTAAGGGGTAATTGGTAAACAG 59.349 44.000 0.00 0.00 0.00 3.16
926 1307 4.400251 GGTAAGGGGTAATTGGTAAACAGC 59.600 45.833 0.00 0.00 0.00 4.40
929 1310 4.851843 AGGGGTAATTGGTAAACAGCTAC 58.148 43.478 0.00 0.00 0.00 3.58
930 1311 4.538891 AGGGGTAATTGGTAAACAGCTACT 59.461 41.667 0.00 0.00 0.00 2.57
931 1312 4.880120 GGGGTAATTGGTAAACAGCTACTC 59.120 45.833 0.00 0.00 0.00 2.59
932 1313 4.880120 GGGTAATTGGTAAACAGCTACTCC 59.120 45.833 0.00 0.00 0.00 3.85
933 1314 4.880120 GGTAATTGGTAAACAGCTACTCCC 59.120 45.833 0.00 0.00 0.00 4.30
934 1315 4.929146 AATTGGTAAACAGCTACTCCCT 57.071 40.909 0.00 0.00 0.00 4.20
935 1316 3.975168 TTGGTAAACAGCTACTCCCTC 57.025 47.619 0.00 0.00 0.00 4.30
936 1317 2.185387 TGGTAAACAGCTACTCCCTCC 58.815 52.381 0.00 0.00 0.00 4.30
937 1318 1.136500 GGTAAACAGCTACTCCCTCCG 59.864 57.143 0.00 0.00 0.00 4.63
938 1319 1.823610 GTAAACAGCTACTCCCTCCGT 59.176 52.381 0.00 0.00 0.00 4.69
940 1321 1.349067 AACAGCTACTCCCTCCGTTT 58.651 50.000 0.00 0.00 0.00 3.60
941 1322 0.896226 ACAGCTACTCCCTCCGTTTC 59.104 55.000 0.00 0.00 0.00 2.78
942 1323 0.895530 CAGCTACTCCCTCCGTTTCA 59.104 55.000 0.00 0.00 0.00 2.69
943 1324 1.482593 CAGCTACTCCCTCCGTTTCAT 59.517 52.381 0.00 0.00 0.00 2.57
944 1325 2.693591 CAGCTACTCCCTCCGTTTCATA 59.306 50.000 0.00 0.00 0.00 2.15
946 1327 3.967987 AGCTACTCCCTCCGTTTCATAAT 59.032 43.478 0.00 0.00 0.00 1.28
947 1328 4.058817 GCTACTCCCTCCGTTTCATAATG 58.941 47.826 0.00 0.00 0.00 1.90
948 1329 4.443034 GCTACTCCCTCCGTTTCATAATGT 60.443 45.833 0.00 0.00 0.00 2.71
949 1330 5.221382 GCTACTCCCTCCGTTTCATAATGTA 60.221 44.000 0.00 0.00 0.00 2.29
950 1331 5.687166 ACTCCCTCCGTTTCATAATGTAA 57.313 39.130 0.00 0.00 0.00 2.41
951 1332 5.671493 ACTCCCTCCGTTTCATAATGTAAG 58.329 41.667 0.00 0.00 0.00 2.34
952 1333 5.424252 ACTCCCTCCGTTTCATAATGTAAGA 59.576 40.000 0.00 0.00 0.00 2.10
953 1334 5.667466 TCCCTCCGTTTCATAATGTAAGAC 58.333 41.667 0.00 0.00 0.00 3.01
954 1335 4.506654 CCCTCCGTTTCATAATGTAAGACG 59.493 45.833 0.00 0.00 0.00 4.18
955 1336 5.107133 CCTCCGTTTCATAATGTAAGACGT 58.893 41.667 0.00 0.00 0.00 4.34
956 1337 5.579511 CCTCCGTTTCATAATGTAAGACGTT 59.420 40.000 0.00 0.00 0.00 3.99
957 1338 6.091713 CCTCCGTTTCATAATGTAAGACGTTT 59.908 38.462 0.00 0.00 0.00 3.60
958 1339 7.360607 CCTCCGTTTCATAATGTAAGACGTTTT 60.361 37.037 0.00 0.00 0.00 2.43
959 1340 7.863666 TCCGTTTCATAATGTAAGACGTTTTT 58.136 30.769 0.00 0.00 0.00 1.94
1012 2710 2.234300 TCACTTCAGTTCCGTTCACC 57.766 50.000 0.00 0.00 0.00 4.02
1014 2712 0.834612 ACTTCAGTTCCGTTCACCCA 59.165 50.000 0.00 0.00 0.00 4.51
1015 2713 1.202651 ACTTCAGTTCCGTTCACCCAG 60.203 52.381 0.00 0.00 0.00 4.45
1016 2714 0.834612 TTCAGTTCCGTTCACCCAGT 59.165 50.000 0.00 0.00 0.00 4.00
1042 2747 2.378038 TGCACCCAAGCAAATATCTCC 58.622 47.619 0.00 0.00 42.46 3.71
1043 2748 1.683385 GCACCCAAGCAAATATCTCCC 59.317 52.381 0.00 0.00 0.00 4.30
1044 2749 2.310538 CACCCAAGCAAATATCTCCCC 58.689 52.381 0.00 0.00 0.00 4.81
1045 2750 1.929494 ACCCAAGCAAATATCTCCCCA 59.071 47.619 0.00 0.00 0.00 4.96
1046 2751 2.314549 ACCCAAGCAAATATCTCCCCAA 59.685 45.455 0.00 0.00 0.00 4.12
1082 2787 0.394192 CGGAGCAGATTAGGCATCCA 59.606 55.000 0.00 0.00 31.94 3.41
1083 2788 1.607509 CGGAGCAGATTAGGCATCCAG 60.608 57.143 0.00 0.00 31.94 3.86
1084 2789 1.696336 GGAGCAGATTAGGCATCCAGA 59.304 52.381 0.00 0.00 32.40 3.86
1085 2790 2.549778 GGAGCAGATTAGGCATCCAGAC 60.550 54.545 0.00 0.00 32.40 3.51
1086 2791 1.419387 AGCAGATTAGGCATCCAGACC 59.581 52.381 0.00 0.00 31.20 3.85
1087 2792 1.875576 GCAGATTAGGCATCCAGACCG 60.876 57.143 0.00 0.00 31.20 4.79
1088 2793 0.394565 AGATTAGGCATCCAGACCGC 59.605 55.000 0.00 0.00 31.20 5.68
1089 2794 0.946221 GATTAGGCATCCAGACCGCG 60.946 60.000 0.00 0.00 0.00 6.46
1090 2795 2.383245 ATTAGGCATCCAGACCGCGG 62.383 60.000 26.86 26.86 0.00 6.46
1104 2809 1.217882 CCGCGGTAAGAATCATCACC 58.782 55.000 19.50 0.00 0.00 4.02
1111 2816 4.299316 GAATCATCACCGCCGCGC 62.299 66.667 7.42 0.00 0.00 6.86
1128 2833 1.373812 GCACCCCGTACCAAGTTCT 59.626 57.895 0.00 0.00 0.00 3.01
1129 2834 0.672711 GCACCCCGTACCAAGTTCTC 60.673 60.000 0.00 0.00 0.00 2.87
1130 2835 0.389426 CACCCCGTACCAAGTTCTCG 60.389 60.000 0.00 0.00 0.00 4.04
1131 2836 0.829182 ACCCCGTACCAAGTTCTCGT 60.829 55.000 0.00 0.00 0.00 4.18
1133 2838 0.389426 CCCGTACCAAGTTCTCGTGG 60.389 60.000 0.00 0.00 46.08 4.94
1143 2878 1.837051 TTCTCGTGGCACCACCTCT 60.837 57.895 12.86 0.00 43.49 3.69
1151 2886 0.615331 GGCACCACCTCTGAATCTCA 59.385 55.000 0.00 0.00 34.51 3.27
1158 2893 0.543749 CCTCTGAATCTCACACCCCC 59.456 60.000 0.00 0.00 0.00 5.40
1175 2910 1.475403 CCCGGAAGAGTAGAAGCAGA 58.525 55.000 0.73 0.00 0.00 4.26
1188 2923 3.505386 AGAAGCAGACCAGAAGAGAAGA 58.495 45.455 0.00 0.00 0.00 2.87
1189 2924 3.511146 AGAAGCAGACCAGAAGAGAAGAG 59.489 47.826 0.00 0.00 0.00 2.85
1279 3017 2.919856 ACACGAGCAGAGCACCCT 60.920 61.111 0.00 0.00 0.00 4.34
1293 3031 2.202756 CCCTAGTTCGCGTGCTCC 60.203 66.667 5.77 0.00 0.00 4.70
1465 3203 1.395608 GACTCCGACTCTGAAGACGAG 59.604 57.143 0.00 0.00 42.15 4.18
1501 3239 2.362503 ATGACGGACCAGGAGCGA 60.363 61.111 0.00 0.00 0.00 4.93
1609 3347 1.376466 GAGGGAGCTGCTGACCAAA 59.624 57.895 18.75 0.00 0.00 3.28
1747 3485 2.278857 GCCGACGACGATGATGCT 60.279 61.111 9.28 0.00 42.66 3.79
1748 3486 1.008881 GCCGACGACGATGATGCTA 60.009 57.895 9.28 0.00 42.66 3.49
1780 3518 0.193574 AGAAGGAGGTGGTCTGGGAA 59.806 55.000 0.00 0.00 0.00 3.97
1801 3539 4.833478 AGATGACAACTACATCAAGCCT 57.167 40.909 0.00 0.00 44.29 4.58
1975 3714 8.744568 TCATATATGCTACTCCTACATCTGAG 57.255 38.462 7.92 0.00 34.73 3.35
1983 3722 4.020543 ACTCCTACATCTGAGTGGTTCTC 58.979 47.826 0.00 0.00 40.23 2.87
1984 3723 3.366396 TCCTACATCTGAGTGGTTCTCC 58.634 50.000 0.00 0.00 42.12 3.71
2003 3742 2.627699 TCCCAAGTCTTGCAAAATGGTC 59.372 45.455 7.09 0.00 0.00 4.02
2179 5904 3.319755 GAGACGTTTTGGGAACACGATA 58.680 45.455 2.29 0.00 42.67 2.92
2207 5932 5.670792 TCACCAAGGGTACTACATACTTG 57.329 43.478 0.00 0.00 38.52 3.16
2214 5939 7.327975 CAAGGGTACTACATACTTGTTCATGA 58.672 38.462 0.00 0.00 37.28 3.07
2216 5941 6.668283 AGGGTACTACATACTTGTTCATGACT 59.332 38.462 0.00 0.00 37.28 3.41
2243 5968 6.704493 TCTTCTGTAAATATAAATTCGGCGCT 59.296 34.615 7.64 0.00 0.00 5.92
2244 5969 6.854496 TCTGTAAATATAAATTCGGCGCTT 57.146 33.333 7.64 0.00 0.00 4.68
2245 5970 6.884187 TCTGTAAATATAAATTCGGCGCTTC 58.116 36.000 7.64 0.00 0.00 3.86
2246 5971 6.480651 TCTGTAAATATAAATTCGGCGCTTCA 59.519 34.615 7.64 0.00 0.00 3.02
2248 5973 6.480651 TGTAAATATAAATTCGGCGCTTCAGA 59.519 34.615 7.64 0.00 0.00 3.27
2249 5974 5.597813 AATATAAATTCGGCGCTTCAGAG 57.402 39.130 7.64 0.00 0.00 3.35
2250 5975 2.665649 TAAATTCGGCGCTTCAGAGA 57.334 45.000 7.64 0.00 0.00 3.10
2251 5976 1.363744 AAATTCGGCGCTTCAGAGAG 58.636 50.000 7.64 0.00 0.00 3.20
2276 6014 3.315191 ACATTCTGAACTTCCAACCGTTG 59.685 43.478 4.12 4.12 0.00 4.10
2456 6609 3.367806 CCTTCAAGACAGCTCTCATTCGA 60.368 47.826 0.00 0.00 0.00 3.71
2468 6621 4.025061 GCTCTCATTCGATCATCAGGTTTG 60.025 45.833 0.00 0.00 0.00 2.93
2480 6633 3.726557 TCAGGTTTGCTGATCCAAGAT 57.273 42.857 0.00 0.00 0.00 2.40
2619 6772 1.115467 GGTCCCTCTGATGTCGTGAT 58.885 55.000 0.00 0.00 0.00 3.06
2627 6780 3.885901 CTCTGATGTCGTGATAGGAAGGA 59.114 47.826 0.00 0.00 0.00 3.36
2639 6792 0.250513 AGGAAGGATGGTTCGTGCTC 59.749 55.000 0.00 0.00 0.00 4.26
2644 6797 0.172803 GGATGGTTCGTGCTCGTACT 59.827 55.000 15.75 0.00 37.47 2.73
2645 6798 1.402968 GGATGGTTCGTGCTCGTACTA 59.597 52.381 15.75 11.36 37.47 1.82
2646 6799 2.541178 GGATGGTTCGTGCTCGTACTAG 60.541 54.545 15.75 0.00 37.47 2.57
2717 6876 6.893005 AGAGTAGAGTTACTGCTACAAGGAAT 59.107 38.462 17.51 3.52 41.40 3.01
2719 6878 5.346181 AGAGTTACTGCTACAAGGAATCC 57.654 43.478 0.00 0.00 0.00 3.01
2720 6879 4.113354 GAGTTACTGCTACAAGGAATCCG 58.887 47.826 0.00 0.00 0.00 4.18
2728 6887 3.491267 GCTACAAGGAATCCGAATTCTCG 59.509 47.826 3.52 0.00 45.02 4.04
2730 6889 1.599542 CAAGGAATCCGAATTCTCGCC 59.400 52.381 3.52 0.00 44.04 5.54
2735 6894 0.179073 ATCCGAATTCTCGCCTGTGG 60.179 55.000 3.52 0.00 44.04 4.17
2764 6923 7.390823 TGCCTAACAGTTTGTGTATGATTCTA 58.609 34.615 0.00 0.00 39.03 2.10
2777 6936 7.157347 GTGTATGATTCTATTCCTCATGCTGA 58.843 38.462 0.00 0.00 34.38 4.26
2781 6940 8.789825 ATGATTCTATTCCTCATGCTGAATAC 57.210 34.615 10.79 4.95 33.46 1.89
2782 6941 7.738847 TGATTCTATTCCTCATGCTGAATACA 58.261 34.615 10.79 6.74 33.46 2.29
2789 6948 3.314357 CCTCATGCTGAATACACATGTGG 59.686 47.826 28.64 11.54 44.38 4.17
2794 6953 1.398041 CTGAATACACATGTGGCCACG 59.602 52.381 30.07 19.43 34.19 4.94
2798 6957 1.759459 TACACATGTGGCCACGTCCA 61.759 55.000 28.08 12.29 34.19 4.02
2807 6966 1.166531 GGCCACGTCCATCCTTATGC 61.167 60.000 0.00 0.00 0.00 3.14
2828 6987 0.731417 CAGCATGTAAGTGAGCTGCC 59.269 55.000 0.00 0.00 46.51 4.85
2829 6988 0.742281 AGCATGTAAGTGAGCTGCCG 60.742 55.000 0.00 0.00 35.72 5.69
2830 6989 1.709147 GCATGTAAGTGAGCTGCCGG 61.709 60.000 0.00 0.00 0.00 6.13
2831 6990 1.450312 ATGTAAGTGAGCTGCCGGC 60.450 57.895 22.73 22.73 42.19 6.13
2832 6991 2.047274 GTAAGTGAGCTGCCGGCA 60.047 61.111 30.59 30.59 44.79 5.69
2833 6992 1.671054 GTAAGTGAGCTGCCGGCAA 60.671 57.895 32.09 13.40 44.79 4.52
2834 6993 1.072332 TAAGTGAGCTGCCGGCAAA 59.928 52.632 32.09 13.69 44.79 3.68
2835 6994 0.536233 TAAGTGAGCTGCCGGCAAAA 60.536 50.000 32.09 13.29 44.79 2.44
2836 6995 1.181098 AAGTGAGCTGCCGGCAAAAT 61.181 50.000 32.09 19.10 44.79 1.82
2837 6996 1.181098 AGTGAGCTGCCGGCAAAATT 61.181 50.000 32.09 15.85 44.79 1.82
2838 6997 1.010419 GTGAGCTGCCGGCAAAATTG 61.010 55.000 32.09 19.57 44.79 2.32
2839 6998 1.177895 TGAGCTGCCGGCAAAATTGA 61.178 50.000 32.09 9.55 44.79 2.57
2840 6999 0.174162 GAGCTGCCGGCAAAATTGAT 59.826 50.000 32.09 17.68 44.79 2.57
2841 7000 0.609662 AGCTGCCGGCAAAATTGATT 59.390 45.000 32.09 7.39 44.79 2.57
2842 7001 1.824230 AGCTGCCGGCAAAATTGATTA 59.176 42.857 32.09 2.57 44.79 1.75
2843 7002 2.431782 AGCTGCCGGCAAAATTGATTAT 59.568 40.909 32.09 3.71 44.79 1.28
2844 7003 3.636300 AGCTGCCGGCAAAATTGATTATA 59.364 39.130 32.09 1.71 44.79 0.98
2845 7004 3.735746 GCTGCCGGCAAAATTGATTATAC 59.264 43.478 32.09 0.12 41.35 1.47
2846 7005 4.499696 GCTGCCGGCAAAATTGATTATACT 60.500 41.667 32.09 0.00 41.35 2.12
2847 7006 5.181690 TGCCGGCAAAATTGATTATACTC 57.818 39.130 30.74 0.00 0.00 2.59
2848 7007 4.887071 TGCCGGCAAAATTGATTATACTCT 59.113 37.500 30.74 0.00 0.00 3.24
2849 7008 5.008613 TGCCGGCAAAATTGATTATACTCTC 59.991 40.000 30.74 0.00 0.00 3.20
2850 7009 5.239525 GCCGGCAAAATTGATTATACTCTCT 59.760 40.000 24.80 0.00 0.00 3.10
2851 7010 6.426937 GCCGGCAAAATTGATTATACTCTCTA 59.573 38.462 24.80 0.00 0.00 2.43
2852 7011 7.571428 GCCGGCAAAATTGATTATACTCTCTAC 60.571 40.741 24.80 0.00 0.00 2.59
2880 7039 1.021390 AGCAATGTTCTTCCGCTCCG 61.021 55.000 0.00 0.00 0.00 4.63
2909 7068 3.681897 CGCAAGTTTCTTCTAGAGCACAT 59.318 43.478 0.00 0.00 0.00 3.21
2923 7082 1.274167 AGCACATCCCAAACATGCAAG 59.726 47.619 0.00 0.00 38.79 4.01
2924 7083 1.717194 CACATCCCAAACATGCAAGC 58.283 50.000 0.00 0.00 0.00 4.01
2925 7084 0.609662 ACATCCCAAACATGCAAGCC 59.390 50.000 0.00 0.00 0.00 4.35
2926 7085 0.609151 CATCCCAAACATGCAAGCCA 59.391 50.000 0.00 0.00 0.00 4.75
2933 7334 3.187637 CCAAACATGCAAGCCAATTTCAG 59.812 43.478 0.00 0.00 0.00 3.02
2987 7440 3.702048 CGGGCCGGGTTCTCTTCA 61.702 66.667 20.56 0.00 0.00 3.02
2996 7449 0.693049 GGTTCTCTTCAGGCCCAGAA 59.307 55.000 0.00 3.15 0.00 3.02
2997 7450 1.283321 GGTTCTCTTCAGGCCCAGAAT 59.717 52.381 8.53 0.00 0.00 2.40
3002 7455 3.267812 TCTCTTCAGGCCCAGAATGAAAT 59.732 43.478 8.53 0.00 39.69 2.17
3004 7457 5.133322 TCTCTTCAGGCCCAGAATGAAATAT 59.867 40.000 8.53 0.00 39.69 1.28
3007 7460 3.462954 TCAGGCCCAGAATGAAATATGGA 59.537 43.478 0.00 0.00 39.69 3.41
3041 7494 2.164422 CCCAAGAGCCCGAAGAAAATTC 59.836 50.000 0.00 0.00 0.00 2.17
3110 7563 9.950680 AAAAATCACTGTATGTCACTAAACTTG 57.049 29.630 0.00 0.00 0.00 3.16
3111 7564 8.902540 AAATCACTGTATGTCACTAAACTTGA 57.097 30.769 0.00 0.00 0.00 3.02
3112 7565 8.539770 AATCACTGTATGTCACTAAACTTGAG 57.460 34.615 0.00 0.00 0.00 3.02
3113 7566 5.926542 TCACTGTATGTCACTAAACTTGAGC 59.073 40.000 0.00 0.00 0.00 4.26
3114 7567 5.120830 CACTGTATGTCACTAAACTTGAGCC 59.879 44.000 0.00 0.00 0.00 4.70
3115 7568 4.242475 TGTATGTCACTAAACTTGAGCCG 58.758 43.478 0.00 0.00 0.00 5.52
3116 7569 2.163818 TGTCACTAAACTTGAGCCGG 57.836 50.000 0.00 0.00 0.00 6.13
3117 7570 1.414919 TGTCACTAAACTTGAGCCGGT 59.585 47.619 1.90 0.00 0.00 5.28
3118 7571 2.158871 TGTCACTAAACTTGAGCCGGTT 60.159 45.455 1.90 0.00 0.00 4.44
3119 7572 2.223377 GTCACTAAACTTGAGCCGGTTG 59.777 50.000 1.90 0.00 0.00 3.77
3120 7573 2.103432 TCACTAAACTTGAGCCGGTTGA 59.897 45.455 1.90 0.00 0.00 3.18
3121 7574 2.223377 CACTAAACTTGAGCCGGTTGAC 59.777 50.000 1.90 0.00 0.00 3.18
3122 7575 2.158871 ACTAAACTTGAGCCGGTTGACA 60.159 45.455 1.90 0.00 0.00 3.58
3123 7576 1.308998 AAACTTGAGCCGGTTGACAG 58.691 50.000 1.90 0.00 0.00 3.51
3124 7577 0.180406 AACTTGAGCCGGTTGACAGT 59.820 50.000 1.90 0.00 0.00 3.55
3125 7578 0.180406 ACTTGAGCCGGTTGACAGTT 59.820 50.000 1.90 0.00 0.00 3.16
3126 7579 1.308998 CTTGAGCCGGTTGACAGTTT 58.691 50.000 1.90 0.00 0.00 2.66
3127 7580 1.002468 CTTGAGCCGGTTGACAGTTTG 60.002 52.381 1.90 0.00 0.00 2.93
3128 7581 0.817634 TGAGCCGGTTGACAGTTTGG 60.818 55.000 1.90 0.00 0.00 3.28
3129 7582 0.818040 GAGCCGGTTGACAGTTTGGT 60.818 55.000 1.90 0.00 0.00 3.67
3130 7583 0.470766 AGCCGGTTGACAGTTTGGTA 59.529 50.000 1.90 0.00 0.00 3.25
3131 7584 0.589708 GCCGGTTGACAGTTTGGTAC 59.410 55.000 1.90 0.00 0.00 3.34
3132 7585 1.232119 CCGGTTGACAGTTTGGTACC 58.768 55.000 4.43 4.43 0.00 3.34
3133 7586 1.475392 CCGGTTGACAGTTTGGTACCA 60.475 52.381 11.60 11.60 0.00 3.25
3134 7587 1.600485 CGGTTGACAGTTTGGTACCAC 59.400 52.381 16.04 3.90 0.00 4.16
3135 7588 2.743838 CGGTTGACAGTTTGGTACCACT 60.744 50.000 16.04 6.66 0.00 4.00
3136 7589 3.493002 CGGTTGACAGTTTGGTACCACTA 60.493 47.826 16.04 2.46 0.00 2.74
3137 7590 3.811497 GGTTGACAGTTTGGTACCACTAC 59.189 47.826 16.04 15.69 0.00 2.73
3138 7591 4.443881 GGTTGACAGTTTGGTACCACTACT 60.444 45.833 16.04 17.76 0.00 2.57
3139 7592 5.121105 GTTGACAGTTTGGTACCACTACTT 58.879 41.667 20.96 14.42 0.00 2.24
3140 7593 4.952460 TGACAGTTTGGTACCACTACTTC 58.048 43.478 20.96 19.77 0.00 3.01
3141 7594 4.406326 TGACAGTTTGGTACCACTACTTCA 59.594 41.667 20.96 21.31 0.00 3.02
3142 7595 5.104859 TGACAGTTTGGTACCACTACTTCAA 60.105 40.000 20.96 7.36 0.00 2.69
3143 7596 5.365619 ACAGTTTGGTACCACTACTTCAAG 58.634 41.667 20.96 14.33 0.00 3.02
3144 7597 5.129815 ACAGTTTGGTACCACTACTTCAAGA 59.870 40.000 20.96 0.00 0.00 3.02
3145 7598 6.183361 ACAGTTTGGTACCACTACTTCAAGAT 60.183 38.462 20.96 2.37 0.00 2.40
3146 7599 7.015877 ACAGTTTGGTACCACTACTTCAAGATA 59.984 37.037 20.96 0.00 0.00 1.98
3147 7600 7.331193 CAGTTTGGTACCACTACTTCAAGATAC 59.669 40.741 20.96 0.41 0.00 2.24
3148 7601 5.927281 TGGTACCACTACTTCAAGATACC 57.073 43.478 11.60 0.00 33.00 2.73
3149 7602 4.713321 TGGTACCACTACTTCAAGATACCC 59.287 45.833 11.60 0.00 31.63 3.69
3150 7603 4.961099 GGTACCACTACTTCAAGATACCCT 59.039 45.833 7.15 0.00 0.00 4.34
3151 7604 6.131961 GGTACCACTACTTCAAGATACCCTA 58.868 44.000 7.15 0.00 0.00 3.53
3152 7605 6.608808 GGTACCACTACTTCAAGATACCCTAA 59.391 42.308 7.15 0.00 0.00 2.69
3153 7606 6.541934 ACCACTACTTCAAGATACCCTAAC 57.458 41.667 0.00 0.00 0.00 2.34
3154 7607 6.262207 ACCACTACTTCAAGATACCCTAACT 58.738 40.000 0.00 0.00 0.00 2.24
3155 7608 7.416731 ACCACTACTTCAAGATACCCTAACTA 58.583 38.462 0.00 0.00 0.00 2.24
3156 7609 7.341512 ACCACTACTTCAAGATACCCTAACTAC 59.658 40.741 0.00 0.00 0.00 2.73
3157 7610 7.416022 CACTACTTCAAGATACCCTAACTACG 58.584 42.308 0.00 0.00 0.00 3.51
3158 7611 5.848833 ACTTCAAGATACCCTAACTACGG 57.151 43.478 0.00 0.00 0.00 4.02
3159 7612 5.267587 ACTTCAAGATACCCTAACTACGGT 58.732 41.667 0.00 0.00 36.08 4.83
3160 7613 5.359292 ACTTCAAGATACCCTAACTACGGTC 59.641 44.000 0.00 0.00 33.36 4.79
3161 7614 4.210331 TCAAGATACCCTAACTACGGTCC 58.790 47.826 0.00 0.00 33.36 4.46
3162 7615 3.956199 CAAGATACCCTAACTACGGTCCA 59.044 47.826 0.00 0.00 33.36 4.02
3163 7616 3.560105 AGATACCCTAACTACGGTCCAC 58.440 50.000 0.00 0.00 33.36 4.02
3173 7626 4.164252 CGGTCCACGTACTTGCTC 57.836 61.111 0.00 0.00 37.93 4.26
3174 7627 1.287815 CGGTCCACGTACTTGCTCA 59.712 57.895 0.00 0.00 37.93 4.26
3175 7628 1.007336 CGGTCCACGTACTTGCTCAC 61.007 60.000 0.00 0.00 37.93 3.51
3176 7629 0.032952 GGTCCACGTACTTGCTCACA 59.967 55.000 0.00 0.00 0.00 3.58
3177 7630 1.137513 GTCCACGTACTTGCTCACAC 58.862 55.000 0.00 0.00 0.00 3.82
3178 7631 0.318360 TCCACGTACTTGCTCACACG 60.318 55.000 0.00 0.00 40.15 4.49
3179 7632 1.282248 CCACGTACTTGCTCACACGG 61.282 60.000 0.00 0.00 38.67 4.94
3180 7633 0.596600 CACGTACTTGCTCACACGGT 60.597 55.000 0.00 0.00 38.67 4.83
3181 7634 0.103572 ACGTACTTGCTCACACGGTT 59.896 50.000 0.00 0.00 38.67 4.44
3182 7635 0.782384 CGTACTTGCTCACACGGTTC 59.218 55.000 0.00 0.00 0.00 3.62
3183 7636 1.860676 GTACTTGCTCACACGGTTCA 58.139 50.000 0.00 0.00 0.00 3.18
3184 7637 1.525619 GTACTTGCTCACACGGTTCAC 59.474 52.381 0.00 0.00 0.00 3.18
3185 7638 0.178068 ACTTGCTCACACGGTTCACT 59.822 50.000 0.00 0.00 0.00 3.41
3186 7639 1.299541 CTTGCTCACACGGTTCACTT 58.700 50.000 0.00 0.00 0.00 3.16
3187 7640 1.670811 CTTGCTCACACGGTTCACTTT 59.329 47.619 0.00 0.00 0.00 2.66
3188 7641 1.013596 TGCTCACACGGTTCACTTTG 58.986 50.000 0.00 0.00 0.00 2.77
3189 7642 0.307760 GCTCACACGGTTCACTTTGG 59.692 55.000 0.00 0.00 0.00 3.28
3190 7643 1.663695 CTCACACGGTTCACTTTGGT 58.336 50.000 0.00 0.00 0.00 3.67
3191 7644 1.597663 CTCACACGGTTCACTTTGGTC 59.402 52.381 0.00 0.00 0.00 4.02
3192 7645 1.208535 TCACACGGTTCACTTTGGTCT 59.791 47.619 0.00 0.00 0.00 3.85
3193 7646 2.431419 TCACACGGTTCACTTTGGTCTA 59.569 45.455 0.00 0.00 0.00 2.59
3194 7647 3.070446 TCACACGGTTCACTTTGGTCTAT 59.930 43.478 0.00 0.00 0.00 1.98
3195 7648 4.281435 TCACACGGTTCACTTTGGTCTATA 59.719 41.667 0.00 0.00 0.00 1.31
3196 7649 5.046878 TCACACGGTTCACTTTGGTCTATAT 60.047 40.000 0.00 0.00 0.00 0.86
3197 7650 5.063438 CACACGGTTCACTTTGGTCTATATG 59.937 44.000 0.00 0.00 0.00 1.78
3198 7651 5.175859 CACGGTTCACTTTGGTCTATATGT 58.824 41.667 0.00 0.00 0.00 2.29
3199 7652 6.071221 ACACGGTTCACTTTGGTCTATATGTA 60.071 38.462 0.00 0.00 0.00 2.29
3200 7653 6.255020 CACGGTTCACTTTGGTCTATATGTAC 59.745 42.308 0.00 0.00 0.00 2.90
3201 7654 5.457799 CGGTTCACTTTGGTCTATATGTACG 59.542 44.000 0.00 0.00 0.00 3.67
3202 7655 6.335777 GGTTCACTTTGGTCTATATGTACGT 58.664 40.000 0.00 0.00 0.00 3.57
3203 7656 6.815142 GGTTCACTTTGGTCTATATGTACGTT 59.185 38.462 0.00 0.00 0.00 3.99
3204 7657 7.332678 GGTTCACTTTGGTCTATATGTACGTTT 59.667 37.037 0.00 0.00 0.00 3.60
3205 7658 8.715088 GTTCACTTTGGTCTATATGTACGTTTT 58.285 33.333 0.00 0.00 0.00 2.43
3206 7659 8.470040 TCACTTTGGTCTATATGTACGTTTTC 57.530 34.615 0.00 0.00 0.00 2.29
3221 7674 4.043761 CGTTTTCGTGTACGTATTTGCT 57.956 40.909 0.00 0.00 40.80 3.91
3222 7675 3.830882 CGTTTTCGTGTACGTATTTGCTG 59.169 43.478 0.00 0.00 40.80 4.41
3223 7676 4.375205 CGTTTTCGTGTACGTATTTGCTGA 60.375 41.667 0.00 0.00 40.80 4.26
3224 7677 4.634349 TTTCGTGTACGTATTTGCTGAC 57.366 40.909 0.00 0.00 40.80 3.51
3225 7678 3.564235 TCGTGTACGTATTTGCTGACT 57.436 42.857 0.00 0.00 40.80 3.41
3226 7679 3.904571 TCGTGTACGTATTTGCTGACTT 58.095 40.909 0.00 0.00 40.80 3.01
3227 7680 3.671459 TCGTGTACGTATTTGCTGACTTG 59.329 43.478 0.00 0.00 40.80 3.16
3228 7681 3.181534 CGTGTACGTATTTGCTGACTTGG 60.182 47.826 0.00 0.00 34.11 3.61
3229 7682 2.739913 TGTACGTATTTGCTGACTTGGC 59.260 45.455 0.00 0.00 0.00 4.52
3230 7683 1.165270 ACGTATTTGCTGACTTGGCC 58.835 50.000 0.00 0.00 0.00 5.36
3231 7684 0.096976 CGTATTTGCTGACTTGGCCG 59.903 55.000 0.00 0.00 0.00 6.13
3232 7685 1.448985 GTATTTGCTGACTTGGCCGA 58.551 50.000 0.00 0.00 0.00 5.54
3233 7686 1.398390 GTATTTGCTGACTTGGCCGAG 59.602 52.381 19.26 19.26 0.00 4.63
3234 7687 0.250901 ATTTGCTGACTTGGCCGAGT 60.251 50.000 26.51 26.51 0.00 4.18
3235 7688 0.884704 TTTGCTGACTTGGCCGAGTC 60.885 55.000 37.12 37.12 44.97 3.36
3239 7692 2.811317 GACTTGGCCGAGTCAGCG 60.811 66.667 38.16 10.47 44.30 5.18
3257 7710 3.124921 GCCGCCAGCTCGCTTTAA 61.125 61.111 0.79 0.00 38.99 1.52
3258 7711 2.785258 CCGCCAGCTCGCTTTAAC 59.215 61.111 0.79 0.00 0.00 2.01
3259 7712 2.750888 CCGCCAGCTCGCTTTAACC 61.751 63.158 0.79 0.00 0.00 2.85
3260 7713 2.785258 GCCAGCTCGCTTTAACCG 59.215 61.111 0.00 0.00 0.00 4.44
3261 7714 2.785258 CCAGCTCGCTTTAACCGC 59.215 61.111 0.00 0.00 0.00 5.68
3262 7715 2.750888 CCAGCTCGCTTTAACCGCC 61.751 63.158 0.00 0.00 0.00 6.13
3263 7716 2.032634 CAGCTCGCTTTAACCGCCA 61.033 57.895 0.00 0.00 0.00 5.69
3264 7717 2.033194 AGCTCGCTTTAACCGCCAC 61.033 57.895 0.00 0.00 0.00 5.01
3265 7718 3.035576 GCTCGCTTTAACCGCCACC 62.036 63.158 0.00 0.00 0.00 4.61
3266 7719 1.375523 CTCGCTTTAACCGCCACCT 60.376 57.895 0.00 0.00 0.00 4.00
3267 7720 1.635663 CTCGCTTTAACCGCCACCTG 61.636 60.000 0.00 0.00 0.00 4.00
3268 7721 2.686816 CGCTTTAACCGCCACCTGG 61.687 63.158 0.00 0.00 38.53 4.45
3269 7722 1.602605 GCTTTAACCGCCACCTGGT 60.603 57.895 0.00 0.00 42.98 4.00
3270 7723 1.583495 GCTTTAACCGCCACCTGGTC 61.583 60.000 0.00 0.00 39.29 4.02
3271 7724 0.958876 CTTTAACCGCCACCTGGTCC 60.959 60.000 0.00 0.00 39.29 4.46
3653 8106 2.047274 AACGGCATGACCTGGTCG 60.047 61.111 21.15 12.31 34.95 4.79
3654 8107 3.605749 AACGGCATGACCTGGTCGG 62.606 63.158 21.15 16.48 34.95 4.79
3671 8124 3.832492 GCCGCTCGCTCTCCTCTT 61.832 66.667 0.00 0.00 0.00 2.85
3672 8125 2.411290 CCGCTCGCTCTCCTCTTC 59.589 66.667 0.00 0.00 0.00 2.87
3673 8126 2.411290 CGCTCGCTCTCCTCTTCC 59.589 66.667 0.00 0.00 0.00 3.46
3674 8127 2.118404 CGCTCGCTCTCCTCTTCCT 61.118 63.158 0.00 0.00 0.00 3.36
3675 8128 1.733526 GCTCGCTCTCCTCTTCCTC 59.266 63.158 0.00 0.00 0.00 3.71
3676 8129 0.751643 GCTCGCTCTCCTCTTCCTCT 60.752 60.000 0.00 0.00 0.00 3.69
3677 8130 1.308998 CTCGCTCTCCTCTTCCTCTC 58.691 60.000 0.00 0.00 0.00 3.20
3678 8131 0.106918 TCGCTCTCCTCTTCCTCTCC 60.107 60.000 0.00 0.00 0.00 3.71
3679 8132 0.106719 CGCTCTCCTCTTCCTCTCCT 60.107 60.000 0.00 0.00 0.00 3.69
3680 8133 1.692411 GCTCTCCTCTTCCTCTCCTC 58.308 60.000 0.00 0.00 0.00 3.71
3681 8134 1.754201 GCTCTCCTCTTCCTCTCCTCC 60.754 61.905 0.00 0.00 0.00 4.30
3682 8135 0.930726 TCTCCTCTTCCTCTCCTCCC 59.069 60.000 0.00 0.00 0.00 4.30
3683 8136 0.633921 CTCCTCTTCCTCTCCTCCCA 59.366 60.000 0.00 0.00 0.00 4.37
3684 8137 1.007721 CTCCTCTTCCTCTCCTCCCAA 59.992 57.143 0.00 0.00 0.00 4.12
3685 8138 1.199615 CCTCTTCCTCTCCTCCCAAC 58.800 60.000 0.00 0.00 0.00 3.77
3686 8139 1.199615 CTCTTCCTCTCCTCCCAACC 58.800 60.000 0.00 0.00 0.00 3.77
3687 8140 0.252742 TCTTCCTCTCCTCCCAACCC 60.253 60.000 0.00 0.00 0.00 4.11
3688 8141 0.252927 CTTCCTCTCCTCCCAACCCT 60.253 60.000 0.00 0.00 0.00 4.34
3689 8142 1.008449 CTTCCTCTCCTCCCAACCCTA 59.992 57.143 0.00 0.00 0.00 3.53
3690 8143 0.637195 TCCTCTCCTCCCAACCCTAG 59.363 60.000 0.00 0.00 0.00 3.02
3691 8144 1.051556 CCTCTCCTCCCAACCCTAGC 61.052 65.000 0.00 0.00 0.00 3.42
3692 8145 1.003051 TCTCCTCCCAACCCTAGCC 59.997 63.158 0.00 0.00 0.00 3.93
3693 8146 2.042261 TCCTCCCAACCCTAGCCC 59.958 66.667 0.00 0.00 0.00 5.19
3694 8147 2.286121 CCTCCCAACCCTAGCCCA 60.286 66.667 0.00 0.00 0.00 5.36
3695 8148 1.928567 CCTCCCAACCCTAGCCCAA 60.929 63.158 0.00 0.00 0.00 4.12
3696 8149 1.303282 CTCCCAACCCTAGCCCAAC 59.697 63.158 0.00 0.00 0.00 3.77
3697 8150 1.151677 TCCCAACCCTAGCCCAACT 60.152 57.895 0.00 0.00 0.00 3.16
3698 8151 1.205460 TCCCAACCCTAGCCCAACTC 61.205 60.000 0.00 0.00 0.00 3.01
3699 8152 1.303282 CCAACCCTAGCCCAACTCC 59.697 63.158 0.00 0.00 0.00 3.85
3700 8153 1.303282 CAACCCTAGCCCAACTCCC 59.697 63.158 0.00 0.00 0.00 4.30
3701 8154 2.298661 AACCCTAGCCCAACTCCCG 61.299 63.158 0.00 0.00 0.00 5.14
3702 8155 2.687566 CCCTAGCCCAACTCCCGT 60.688 66.667 0.00 0.00 0.00 5.28
3703 8156 2.732619 CCCTAGCCCAACTCCCGTC 61.733 68.421 0.00 0.00 0.00 4.79
3704 8157 2.732619 CCTAGCCCAACTCCCGTCC 61.733 68.421 0.00 0.00 0.00 4.79
3705 8158 2.686106 TAGCCCAACTCCCGTCCC 60.686 66.667 0.00 0.00 0.00 4.46
3710 8163 4.760047 CAACTCCCGTCCCCGCTG 62.760 72.222 0.00 0.00 0.00 5.18
3731 8184 2.434884 CAGCCATTGCCGACGTCT 60.435 61.111 14.70 0.00 38.69 4.18
3732 8185 1.153647 CAGCCATTGCCGACGTCTA 60.154 57.895 14.70 0.00 38.69 2.59
3733 8186 1.153628 AGCCATTGCCGACGTCTAC 60.154 57.895 14.70 5.85 38.69 2.59
3734 8187 2.514013 GCCATTGCCGACGTCTACG 61.514 63.158 14.70 0.38 46.33 3.51
3735 8188 2.514013 CCATTGCCGACGTCTACGC 61.514 63.158 14.70 12.56 44.43 4.42
3736 8189 2.202703 ATTGCCGACGTCTACGCC 60.203 61.111 14.70 0.00 44.43 5.68
3737 8190 3.711541 ATTGCCGACGTCTACGCCC 62.712 63.158 14.70 0.00 44.43 6.13
3739 8192 4.549516 GCCGACGTCTACGCCCTC 62.550 72.222 14.70 0.00 44.43 4.30
3740 8193 3.885521 CCGACGTCTACGCCCTCC 61.886 72.222 14.70 0.00 44.43 4.30
3741 8194 4.233635 CGACGTCTACGCCCTCCG 62.234 72.222 14.70 0.00 44.43 4.63
3742 8195 4.549516 GACGTCTACGCCCTCCGC 62.550 72.222 8.70 0.00 44.43 5.54
3765 8218 4.114997 CAACCATTGCCGACGCCC 62.115 66.667 0.00 0.00 0.00 6.13
3766 8219 4.344865 AACCATTGCCGACGCCCT 62.345 61.111 0.00 0.00 0.00 5.19
3767 8220 4.778143 ACCATTGCCGACGCCCTC 62.778 66.667 0.00 0.00 0.00 4.30
3769 8222 4.473520 CATTGCCGACGCCCTCCT 62.474 66.667 0.00 0.00 0.00 3.69
3770 8223 4.162690 ATTGCCGACGCCCTCCTC 62.163 66.667 0.00 0.00 0.00 3.71
3801 8254 4.129737 CCCGCCGTCATGTCGTCT 62.130 66.667 11.29 0.00 0.00 4.18
3802 8255 2.126071 CCGCCGTCATGTCGTCTT 60.126 61.111 11.29 0.00 0.00 3.01
3803 8256 2.158959 CCGCCGTCATGTCGTCTTC 61.159 63.158 11.29 0.00 0.00 2.87
3804 8257 2.158959 CGCCGTCATGTCGTCTTCC 61.159 63.158 11.29 0.00 0.00 3.46
3805 8258 1.080093 GCCGTCATGTCGTCTTCCA 60.080 57.895 11.29 0.00 0.00 3.53
3806 8259 1.078759 GCCGTCATGTCGTCTTCCAG 61.079 60.000 11.29 0.00 0.00 3.86
3807 8260 1.078759 CCGTCATGTCGTCTTCCAGC 61.079 60.000 11.29 0.00 0.00 4.85
3808 8261 0.109086 CGTCATGTCGTCTTCCAGCT 60.109 55.000 4.09 0.00 0.00 4.24
3809 8262 1.634702 GTCATGTCGTCTTCCAGCTC 58.365 55.000 0.00 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 2.124151 AACCCATGGGCTCATCGC 60.124 61.111 31.73 0.00 39.32 4.58
45 46 1.380246 TGCAACCCATGGGCTCATC 60.380 57.895 31.73 15.47 39.32 2.92
56 57 4.666253 TGGAGCCTGCTGCAACCC 62.666 66.667 11.10 3.22 41.33 4.11
78 79 4.276678 CCTTCTGTCAAAACTGAATCAGCA 59.723 41.667 10.62 0.00 40.97 4.41
102 103 7.482169 TCTTCTTATTTGCTGAAGACCTCTA 57.518 36.000 0.00 0.00 40.54 2.43
144 148 5.931532 AGCAAAGAATGATGTTACAACTCG 58.068 37.500 0.00 0.00 0.00 4.18
179 186 7.430502 CAGTGGCGAAAGAAAGAATGATAAATC 59.569 37.037 0.00 0.00 0.00 2.17
236 243 6.712095 TCTGCTTTGGTGATGATACATAATCC 59.288 38.462 0.00 0.00 33.22 3.01
253 260 7.615582 TTTGTATCTCCTATGTTCTGCTTTG 57.384 36.000 0.00 0.00 0.00 2.77
274 281 6.197096 CGAAGTGTCTTGGTTCTTGAAATTTG 59.803 38.462 0.00 0.00 0.00 2.32
275 282 6.127730 ACGAAGTGTCTTGGTTCTTGAAATTT 60.128 34.615 0.00 0.00 42.51 1.82
308 315 3.059884 ACATGTCAGCAGAACTTGTACG 58.940 45.455 0.00 0.00 0.00 3.67
368 426 6.374417 TGGGTTTCTACTTCTCTGCTATTT 57.626 37.500 0.00 0.00 0.00 1.40
370 428 5.485708 ACTTGGGTTTCTACTTCTCTGCTAT 59.514 40.000 0.00 0.00 0.00 2.97
382 440 3.628487 CGGAAACAACACTTGGGTTTCTA 59.372 43.478 19.49 0.00 45.90 2.10
383 441 2.425668 CGGAAACAACACTTGGGTTTCT 59.574 45.455 19.49 0.00 45.90 2.52
442 501 3.173599 CAATTGAAGCATTACACGGCAG 58.826 45.455 0.00 0.00 0.00 4.85
443 502 2.556189 ACAATTGAAGCATTACACGGCA 59.444 40.909 13.59 0.00 0.00 5.69
444 503 3.216147 ACAATTGAAGCATTACACGGC 57.784 42.857 13.59 0.00 0.00 5.68
445 504 5.046910 AGAACAATTGAAGCATTACACGG 57.953 39.130 13.59 0.00 0.00 4.94
446 505 6.991485 AAAGAACAATTGAAGCATTACACG 57.009 33.333 13.59 0.00 0.00 4.49
447 506 8.915654 CCTAAAAGAACAATTGAAGCATTACAC 58.084 33.333 13.59 0.00 0.00 2.90
448 507 8.087750 CCCTAAAAGAACAATTGAAGCATTACA 58.912 33.333 13.59 0.00 0.00 2.41
449 508 7.545615 CCCCTAAAAGAACAATTGAAGCATTAC 59.454 37.037 13.59 0.00 0.00 1.89
450 509 7.310361 CCCCCTAAAAGAACAATTGAAGCATTA 60.310 37.037 13.59 5.24 0.00 1.90
451 510 6.466812 CCCCTAAAAGAACAATTGAAGCATT 58.533 36.000 13.59 4.34 0.00 3.56
452 511 5.046376 CCCCCTAAAAGAACAATTGAAGCAT 60.046 40.000 13.59 0.00 0.00 3.79
453 512 4.283212 CCCCCTAAAAGAACAATTGAAGCA 59.717 41.667 13.59 0.00 0.00 3.91
454 513 4.526650 TCCCCCTAAAAGAACAATTGAAGC 59.473 41.667 13.59 0.61 0.00 3.86
455 514 6.857437 ATCCCCCTAAAAGAACAATTGAAG 57.143 37.500 13.59 0.00 0.00 3.02
456 515 7.071824 ACAAATCCCCCTAAAAGAACAATTGAA 59.928 33.333 13.59 0.00 0.00 2.69
457 516 6.556874 ACAAATCCCCCTAAAAGAACAATTGA 59.443 34.615 13.59 0.00 0.00 2.57
458 517 6.768483 ACAAATCCCCCTAAAAGAACAATTG 58.232 36.000 3.24 3.24 0.00 2.32
459 518 7.387265 AACAAATCCCCCTAAAAGAACAATT 57.613 32.000 0.00 0.00 0.00 2.32
460 519 6.013725 GGAACAAATCCCCCTAAAAGAACAAT 60.014 38.462 0.00 0.00 43.00 2.71
461 520 5.305902 GGAACAAATCCCCCTAAAAGAACAA 59.694 40.000 0.00 0.00 43.00 2.83
462 521 4.836175 GGAACAAATCCCCCTAAAAGAACA 59.164 41.667 0.00 0.00 43.00 3.18
463 522 5.401531 GGAACAAATCCCCCTAAAAGAAC 57.598 43.478 0.00 0.00 43.00 3.01
524 583 5.015817 ACTCCCCCTAAACAATTTGGTCATA 59.984 40.000 0.78 0.00 30.44 2.15
552 618 1.235724 CCTTCGAAACTGTGAACCCC 58.764 55.000 0.00 0.00 0.00 4.95
580 646 2.538437 CAGTGGAAGAGCAGAGATTCG 58.462 52.381 0.00 0.00 0.00 3.34
747 815 6.233905 TCGAATGTTATCAGGGAAGATCAA 57.766 37.500 0.00 0.00 0.00 2.57
777 848 7.693952 TCCATAATTCTTGTCGTGATTTTAGC 58.306 34.615 0.00 0.00 0.00 3.09
784 855 7.279981 CCTTATGTTCCATAATTCTTGTCGTGA 59.720 37.037 0.00 0.00 0.00 4.35
805 876 5.546035 AAAAGAACCCATGTACCCCTTAT 57.454 39.130 0.00 0.00 0.00 1.73
806 877 5.162969 TGAAAAAGAACCCATGTACCCCTTA 60.163 40.000 0.00 0.00 0.00 2.69
811 882 5.908341 TGTTTGAAAAAGAACCCATGTACC 58.092 37.500 0.00 0.00 0.00 3.34
819 890 7.225341 AGCATTTCAGATGTTTGAAAAAGAACC 59.775 33.333 5.41 0.00 46.63 3.62
863 1244 5.580691 GGGAAAACTTGACTTGGTTTCAAAG 59.419 40.000 6.59 0.00 35.02 2.77
868 1249 3.196901 GTGGGGAAAACTTGACTTGGTTT 59.803 43.478 0.00 0.00 37.26 3.27
882 1263 1.051556 GGTTTTGCTGGGTGGGGAAA 61.052 55.000 0.00 0.00 0.00 3.13
883 1264 1.458588 GGTTTTGCTGGGTGGGGAA 60.459 57.895 0.00 0.00 0.00 3.97
884 1265 2.200092 GGTTTTGCTGGGTGGGGA 59.800 61.111 0.00 0.00 0.00 4.81
886 1267 2.209315 CCTGGTTTTGCTGGGTGGG 61.209 63.158 0.00 0.00 0.00 4.61
887 1268 0.178975 TACCTGGTTTTGCTGGGTGG 60.179 55.000 3.84 0.00 0.00 4.61
888 1269 1.613437 CTTACCTGGTTTTGCTGGGTG 59.387 52.381 3.84 0.00 0.00 4.61
890 1271 1.256812 CCTTACCTGGTTTTGCTGGG 58.743 55.000 3.84 0.00 0.00 4.45
891 1272 1.256812 CCCTTACCTGGTTTTGCTGG 58.743 55.000 3.84 0.00 0.00 4.85
893 1274 0.857675 ACCCCTTACCTGGTTTTGCT 59.142 50.000 3.84 0.00 0.00 3.91
894 1275 2.590282 TACCCCTTACCTGGTTTTGC 57.410 50.000 3.84 0.00 36.04 3.68
895 1276 4.221924 CCAATTACCCCTTACCTGGTTTTG 59.778 45.833 3.84 0.00 36.04 2.44
896 1277 4.140639 ACCAATTACCCCTTACCTGGTTTT 60.141 41.667 3.84 0.00 36.04 2.43
897 1278 3.403394 ACCAATTACCCCTTACCTGGTTT 59.597 43.478 3.84 0.00 36.04 3.27
898 1279 2.998186 ACCAATTACCCCTTACCTGGTT 59.002 45.455 3.84 0.00 36.04 3.67
899 1280 2.651190 ACCAATTACCCCTTACCTGGT 58.349 47.619 4.05 4.05 38.69 4.00
905 1286 5.523883 AGCTGTTTACCAATTACCCCTTA 57.476 39.130 0.00 0.00 0.00 2.69
906 1287 4.397919 AGCTGTTTACCAATTACCCCTT 57.602 40.909 0.00 0.00 0.00 3.95
911 1292 5.742063 AGGGAGTAGCTGTTTACCAATTAC 58.258 41.667 0.00 0.00 0.00 1.89
920 1301 1.349067 AACGGAGGGAGTAGCTGTTT 58.651 50.000 0.00 0.00 0.00 2.83
921 1302 1.275573 GAAACGGAGGGAGTAGCTGTT 59.724 52.381 0.00 0.00 32.83 3.16
922 1303 0.896226 GAAACGGAGGGAGTAGCTGT 59.104 55.000 0.00 0.00 0.00 4.40
923 1304 0.895530 TGAAACGGAGGGAGTAGCTG 59.104 55.000 0.00 0.00 0.00 4.24
924 1305 1.867363 ATGAAACGGAGGGAGTAGCT 58.133 50.000 0.00 0.00 0.00 3.32
925 1306 3.814005 TTATGAAACGGAGGGAGTAGC 57.186 47.619 0.00 0.00 0.00 3.58
926 1307 5.277857 ACATTATGAAACGGAGGGAGTAG 57.722 43.478 0.00 0.00 0.00 2.57
929 1310 5.753921 GTCTTACATTATGAAACGGAGGGAG 59.246 44.000 0.00 0.00 0.00 4.30
930 1311 5.667466 GTCTTACATTATGAAACGGAGGGA 58.333 41.667 0.00 0.00 0.00 4.20
931 1312 4.506654 CGTCTTACATTATGAAACGGAGGG 59.493 45.833 0.00 0.00 0.00 4.30
932 1313 5.107133 ACGTCTTACATTATGAAACGGAGG 58.893 41.667 0.00 0.00 0.00 4.30
933 1314 6.642683 AACGTCTTACATTATGAAACGGAG 57.357 37.500 0.00 0.00 0.00 4.63
934 1315 7.424227 AAAACGTCTTACATTATGAAACGGA 57.576 32.000 0.00 0.00 0.00 4.69
959 1340 2.781923 GGCCGGTCCTACTGTTAAAAA 58.218 47.619 1.90 0.00 0.00 1.94
960 1341 1.338011 CGGCCGGTCCTACTGTTAAAA 60.338 52.381 20.10 0.00 0.00 1.52
961 1342 0.247185 CGGCCGGTCCTACTGTTAAA 59.753 55.000 20.10 0.00 0.00 1.52
962 1343 1.892338 CGGCCGGTCCTACTGTTAA 59.108 57.895 20.10 0.00 0.00 2.01
963 1344 2.713967 GCGGCCGGTCCTACTGTTA 61.714 63.158 29.38 0.00 0.00 2.41
964 1345 4.078516 GCGGCCGGTCCTACTGTT 62.079 66.667 29.38 0.00 0.00 3.16
985 1366 2.767505 GGAACTGAAGTGAACCGTGAT 58.232 47.619 0.00 0.00 0.00 3.06
1012 2710 3.132029 TTGGGTGCACTGGGACTGG 62.132 63.158 17.98 0.00 35.41 4.00
1014 2712 2.839098 CTTGGGTGCACTGGGACT 59.161 61.111 17.98 0.00 35.41 3.85
1015 2713 2.985847 GCTTGGGTGCACTGGGAC 60.986 66.667 17.98 0.00 34.10 4.46
1016 2714 2.580155 TTTGCTTGGGTGCACTGGGA 62.580 55.000 17.98 3.05 43.20 4.37
1041 2746 0.252012 TTGTATGCTTGGGGTTGGGG 60.252 55.000 0.00 0.00 0.00 4.96
1042 2747 1.185315 CTTGTATGCTTGGGGTTGGG 58.815 55.000 0.00 0.00 0.00 4.12
1043 2748 0.532115 GCTTGTATGCTTGGGGTTGG 59.468 55.000 0.00 0.00 0.00 3.77
1044 2749 0.532115 GGCTTGTATGCTTGGGGTTG 59.468 55.000 0.00 0.00 0.00 3.77
1045 2750 0.965363 CGGCTTGTATGCTTGGGGTT 60.965 55.000 0.00 0.00 0.00 4.11
1046 2751 1.378514 CGGCTTGTATGCTTGGGGT 60.379 57.895 0.00 0.00 0.00 4.95
1082 2787 1.754803 TGATGATTCTTACCGCGGTCT 59.245 47.619 38.01 15.02 0.00 3.85
1083 2788 1.859080 GTGATGATTCTTACCGCGGTC 59.141 52.381 38.01 20.28 0.00 4.79
1084 2789 1.472728 GGTGATGATTCTTACCGCGGT 60.473 52.381 36.01 36.01 0.00 5.68
1085 2790 1.217882 GGTGATGATTCTTACCGCGG 58.782 55.000 26.86 26.86 0.00 6.46
1089 2794 1.217882 CGGCGGTGATGATTCTTACC 58.782 55.000 0.00 0.00 0.00 2.85
1090 2795 0.582005 GCGGCGGTGATGATTCTTAC 59.418 55.000 9.78 0.00 0.00 2.34
1091 2796 0.874175 CGCGGCGGTGATGATTCTTA 60.874 55.000 15.84 0.00 0.00 2.10
1111 2816 0.389426 CGAGAACTTGGTACGGGGTG 60.389 60.000 0.00 0.00 0.00 4.61
1113 2818 0.389426 CACGAGAACTTGGTACGGGG 60.389 60.000 0.00 0.00 0.00 5.73
1130 2835 0.326264 AGATTCAGAGGTGGTGCCAC 59.674 55.000 12.66 12.66 45.49 5.01
1131 2836 0.615331 GAGATTCAGAGGTGGTGCCA 59.385 55.000 0.00 0.00 40.61 4.92
1133 2838 1.002430 TGTGAGATTCAGAGGTGGTGC 59.998 52.381 0.00 0.00 0.00 5.01
1143 2878 0.838554 TTCCGGGGGTGTGAGATTCA 60.839 55.000 0.00 0.00 0.00 2.57
1151 2886 0.115745 TTCTACTCTTCCGGGGGTGT 59.884 55.000 0.00 4.61 0.00 4.16
1158 2893 1.819288 TGGTCTGCTTCTACTCTTCCG 59.181 52.381 0.00 0.00 0.00 4.30
1175 2910 1.594310 GCGCCTCTTCTCTTCTGGT 59.406 57.895 0.00 0.00 0.00 4.00
1279 3017 3.766691 GGGGGAGCACGCGAACTA 61.767 66.667 15.93 0.00 0.00 2.24
1501 3239 3.302347 CTTCCTCCGCAGCGTCCTT 62.302 63.158 15.05 0.00 0.00 3.36
1747 3485 2.103094 CTCCTTCTTGCCGTCATCCATA 59.897 50.000 0.00 0.00 0.00 2.74
1748 3486 0.911769 TCCTTCTTGCCGTCATCCAT 59.088 50.000 0.00 0.00 0.00 3.41
1780 3518 4.019860 ACAGGCTTGATGTAGTTGTCATCT 60.020 41.667 1.40 0.00 41.30 2.90
1801 3539 3.496692 CCTTTGTCTTGACATCCCTGACA 60.497 47.826 4.18 0.00 36.10 3.58
1983 3722 2.607771 CGACCATTTTGCAAGACTTGGG 60.608 50.000 16.80 10.28 0.00 4.12
1984 3723 2.607771 CCGACCATTTTGCAAGACTTGG 60.608 50.000 16.80 7.82 0.00 3.61
1988 3727 2.793278 AACCGACCATTTTGCAAGAC 57.207 45.000 0.00 0.00 0.00 3.01
2065 5789 8.662141 GTGATTTACCAAAGTAATACATCACGT 58.338 33.333 10.89 0.00 40.66 4.49
2179 5904 1.372501 AGTACCCTTGGTGAAGGCAT 58.627 50.000 0.00 0.00 46.89 4.40
2193 5918 8.773404 AAAGTCATGAACAAGTATGTAGTACC 57.227 34.615 0.00 0.00 39.40 3.34
2216 5941 7.853929 GCGCCGAATTTATATTTACAGAAGAAA 59.146 33.333 0.00 0.00 0.00 2.52
2236 5961 1.971695 TGACTCTCTGAAGCGCCGA 60.972 57.895 2.29 0.00 0.00 5.54
2239 5964 1.658095 GAATGTGACTCTCTGAAGCGC 59.342 52.381 0.00 0.00 0.00 5.92
2244 5969 5.279206 GGAAGTTCAGAATGTGACTCTCTGA 60.279 44.000 11.46 11.46 42.91 3.27
2245 5970 4.928615 GGAAGTTCAGAATGTGACTCTCTG 59.071 45.833 5.01 7.81 38.34 3.35
2246 5971 4.590647 TGGAAGTTCAGAATGTGACTCTCT 59.409 41.667 5.01 0.00 37.40 3.10
2248 5973 4.963318 TGGAAGTTCAGAATGTGACTCT 57.037 40.909 5.01 0.00 37.40 3.24
2249 5974 4.214332 GGTTGGAAGTTCAGAATGTGACTC 59.786 45.833 5.01 0.00 37.40 3.36
2250 5975 4.137543 GGTTGGAAGTTCAGAATGTGACT 58.862 43.478 5.01 0.00 37.40 3.41
2251 5976 3.058914 CGGTTGGAAGTTCAGAATGTGAC 60.059 47.826 5.01 0.00 37.40 3.67
2332 6070 1.122019 AACCGGACACCTTCAGAGCT 61.122 55.000 9.46 0.00 0.00 4.09
2480 6633 5.393787 CCGGACAGCTATTAGTACAAGTGAA 60.394 44.000 0.00 0.00 0.00 3.18
2489 6642 1.030457 CCGACCGGACAGCTATTAGT 58.970 55.000 9.46 0.00 37.50 2.24
2619 6772 1.480954 GAGCACGAACCATCCTTCCTA 59.519 52.381 0.00 0.00 0.00 2.94
2627 6780 2.089980 ACTAGTACGAGCACGAACCAT 58.910 47.619 11.40 0.00 42.66 3.55
2639 6792 7.701078 ACACTGATGCAAAATACTACTAGTACG 59.299 37.037 0.00 0.00 32.84 3.67
2644 6797 9.938280 AAGTTACACTGATGCAAAATACTACTA 57.062 29.630 0.00 0.00 0.00 1.82
2645 6798 8.848474 AAGTTACACTGATGCAAAATACTACT 57.152 30.769 0.00 0.00 0.00 2.57
2646 6799 9.329913 CAAAGTTACACTGATGCAAAATACTAC 57.670 33.333 0.00 0.00 0.00 2.73
2682 6835 8.047911 AGCAGTAACTCTACTCTTGATGTACTA 58.952 37.037 0.00 0.00 36.14 1.82
2683 6836 6.887545 AGCAGTAACTCTACTCTTGATGTACT 59.112 38.462 0.00 0.00 36.14 2.73
2684 6837 7.090953 AGCAGTAACTCTACTCTTGATGTAC 57.909 40.000 0.00 0.00 36.14 2.90
2717 6876 1.218047 CCACAGGCGAGAATTCGGA 59.782 57.895 0.00 0.00 46.76 4.55
2735 6894 3.369546 ACACAAACTGTTAGGCATTGC 57.630 42.857 0.00 0.00 0.00 3.56
2777 6936 1.448985 GACGTGGCCACATGTGTATT 58.551 50.000 34.16 8.19 46.46 1.89
2781 6940 1.647545 GATGGACGTGGCCACATGTG 61.648 60.000 34.16 20.56 46.46 3.21
2789 6948 0.179045 AGCATAAGGATGGACGTGGC 60.179 55.000 0.00 0.00 33.26 5.01
2794 6953 2.627515 TGCTGAGCATAAGGATGGAC 57.372 50.000 1.40 0.00 31.71 4.02
2820 6979 1.177895 TCAATTTTGCCGGCAGCTCA 61.178 50.000 30.75 12.64 44.23 4.26
2821 6980 0.174162 ATCAATTTTGCCGGCAGCTC 59.826 50.000 30.75 0.00 44.23 4.09
2822 6981 0.609662 AATCAATTTTGCCGGCAGCT 59.390 45.000 30.75 15.40 44.23 4.24
2823 6982 2.292103 TAATCAATTTTGCCGGCAGC 57.708 45.000 30.75 1.28 44.14 5.25
2825 6984 4.887071 AGAGTATAATCAATTTTGCCGGCA 59.113 37.500 29.03 29.03 0.00 5.69
2826 6985 5.239525 AGAGAGTATAATCAATTTTGCCGGC 59.760 40.000 22.73 22.73 0.00 6.13
2827 6986 6.867662 AGAGAGTATAATCAATTTTGCCGG 57.132 37.500 0.00 0.00 0.00 6.13
2828 6987 8.594881 AGTAGAGAGTATAATCAATTTTGCCG 57.405 34.615 2.62 0.00 0.00 5.69
2844 7003 9.810545 GAACATTGCTAAATCTTAGTAGAGAGT 57.189 33.333 0.00 0.00 32.92 3.24
2848 7007 9.601217 GGAAGAACATTGCTAAATCTTAGTAGA 57.399 33.333 0.00 0.00 30.89 2.59
2849 7008 8.543774 CGGAAGAACATTGCTAAATCTTAGTAG 58.456 37.037 0.00 0.00 30.89 2.57
2850 7009 7.011109 GCGGAAGAACATTGCTAAATCTTAGTA 59.989 37.037 0.00 0.00 30.89 1.82
2851 7010 6.183360 GCGGAAGAACATTGCTAAATCTTAGT 60.183 38.462 0.00 0.00 30.89 2.24
2852 7011 6.037610 AGCGGAAGAACATTGCTAAATCTTAG 59.962 38.462 0.00 0.00 33.37 2.18
2860 7019 1.739035 CGGAGCGGAAGAACATTGCTA 60.739 52.381 0.00 0.00 35.73 3.49
2866 7025 1.005394 GGAACGGAGCGGAAGAACA 60.005 57.895 0.00 0.00 0.00 3.18
2880 7039 0.385598 GAAGAAACTTGCGCCGGAAC 60.386 55.000 5.05 0.00 0.00 3.62
2892 7051 4.207891 TGGGATGTGCTCTAGAAGAAAC 57.792 45.455 0.00 0.00 0.00 2.78
2909 7068 1.350071 ATTGGCTTGCATGTTTGGGA 58.650 45.000 1.14 0.00 0.00 4.37
2941 7342 4.136051 CAAATTGAAATGGTTGCACCCTT 58.864 39.130 0.57 0.00 37.50 3.95
2943 7344 2.813172 CCAAATTGAAATGGTTGCACCC 59.187 45.455 0.00 0.00 37.50 4.61
2944 7345 2.226200 GCCAAATTGAAATGGTTGCACC 59.774 45.455 0.00 0.00 39.00 5.01
2945 7346 3.058777 CAGCCAAATTGAAATGGTTGCAC 60.059 43.478 0.00 0.00 40.33 4.57
2946 7347 3.139850 CAGCCAAATTGAAATGGTTGCA 58.860 40.909 0.00 0.00 40.33 4.08
2948 7349 2.485038 GCCAGCCAAATTGAAATGGTTG 59.515 45.455 9.29 9.29 44.67 3.77
2957 7389 4.455906 GCCCGGCCAGCCAAATTG 62.456 66.667 9.78 0.00 35.37 2.32
2984 7437 4.079269 TCCATATTTCATTCTGGGCCTGAA 60.079 41.667 25.40 25.40 0.00 3.02
2987 7440 3.837355 GTCCATATTTCATTCTGGGCCT 58.163 45.455 4.53 0.00 0.00 5.19
2996 7449 0.179032 TGCGGCGGTCCATATTTCAT 60.179 50.000 9.78 0.00 0.00 2.57
2997 7450 1.092921 GTGCGGCGGTCCATATTTCA 61.093 55.000 9.78 0.00 0.00 2.69
3002 7455 4.201679 CTCGTGCGGCGGTCCATA 62.202 66.667 9.78 0.00 41.72 2.74
3041 7494 2.937799 AGTTACTACTCTTCTCGCGAGG 59.062 50.000 33.98 20.86 32.83 4.63
3084 7537 9.950680 CAAGTTTAGTGACATACAGTGATTTTT 57.049 29.630 0.00 0.00 33.78 1.94
3085 7538 9.337396 TCAAGTTTAGTGACATACAGTGATTTT 57.663 29.630 0.00 0.00 33.78 1.82
3086 7539 8.902540 TCAAGTTTAGTGACATACAGTGATTT 57.097 30.769 0.00 0.00 33.78 2.17
3087 7540 7.118390 GCTCAAGTTTAGTGACATACAGTGATT 59.882 37.037 0.00 0.00 33.78 2.57
3088 7541 6.591834 GCTCAAGTTTAGTGACATACAGTGAT 59.408 38.462 0.00 0.00 33.78 3.06
3089 7542 5.926542 GCTCAAGTTTAGTGACATACAGTGA 59.073 40.000 0.00 0.00 33.78 3.41
3090 7543 5.120830 GGCTCAAGTTTAGTGACATACAGTG 59.879 44.000 0.00 0.00 33.78 3.66
3091 7544 5.238583 GGCTCAAGTTTAGTGACATACAGT 58.761 41.667 0.00 0.00 36.09 3.55
3092 7545 4.327357 CGGCTCAAGTTTAGTGACATACAG 59.673 45.833 0.00 0.00 0.00 2.74
3093 7546 4.242475 CGGCTCAAGTTTAGTGACATACA 58.758 43.478 0.00 0.00 0.00 2.29
3094 7547 3.617263 CCGGCTCAAGTTTAGTGACATAC 59.383 47.826 0.00 0.00 0.00 2.39
3095 7548 3.259876 ACCGGCTCAAGTTTAGTGACATA 59.740 43.478 0.00 0.00 0.00 2.29
3096 7549 2.038557 ACCGGCTCAAGTTTAGTGACAT 59.961 45.455 0.00 0.00 0.00 3.06
3097 7550 1.414919 ACCGGCTCAAGTTTAGTGACA 59.585 47.619 0.00 0.00 0.00 3.58
3098 7551 2.165319 ACCGGCTCAAGTTTAGTGAC 57.835 50.000 0.00 0.00 0.00 3.67
3099 7552 2.103432 TCAACCGGCTCAAGTTTAGTGA 59.897 45.455 0.00 0.00 0.00 3.41
3100 7553 2.223377 GTCAACCGGCTCAAGTTTAGTG 59.777 50.000 0.00 0.00 0.00 2.74
3101 7554 2.158871 TGTCAACCGGCTCAAGTTTAGT 60.159 45.455 0.00 0.00 0.00 2.24
3102 7555 2.480419 CTGTCAACCGGCTCAAGTTTAG 59.520 50.000 0.00 0.00 0.00 1.85
3103 7556 2.158871 ACTGTCAACCGGCTCAAGTTTA 60.159 45.455 0.00 0.00 0.00 2.01
3104 7557 1.308998 CTGTCAACCGGCTCAAGTTT 58.691 50.000 0.00 0.00 0.00 2.66
3105 7558 0.180406 ACTGTCAACCGGCTCAAGTT 59.820 50.000 0.00 0.00 0.00 2.66
3106 7559 0.180406 AACTGTCAACCGGCTCAAGT 59.820 50.000 0.00 0.00 0.00 3.16
3107 7560 1.002468 CAAACTGTCAACCGGCTCAAG 60.002 52.381 0.00 0.00 0.00 3.02
3108 7561 1.021202 CAAACTGTCAACCGGCTCAA 58.979 50.000 0.00 0.00 0.00 3.02
3109 7562 0.817634 CCAAACTGTCAACCGGCTCA 60.818 55.000 0.00 0.00 0.00 4.26
3110 7563 0.818040 ACCAAACTGTCAACCGGCTC 60.818 55.000 0.00 0.00 0.00 4.70
3111 7564 0.470766 TACCAAACTGTCAACCGGCT 59.529 50.000 0.00 0.00 0.00 5.52
3112 7565 0.589708 GTACCAAACTGTCAACCGGC 59.410 55.000 0.00 0.00 0.00 6.13
3113 7566 1.232119 GGTACCAAACTGTCAACCGG 58.768 55.000 7.15 0.00 0.00 5.28
3114 7567 1.600485 GTGGTACCAAACTGTCAACCG 59.400 52.381 18.31 0.00 0.00 4.44
3115 7568 2.927028 AGTGGTACCAAACTGTCAACC 58.073 47.619 18.31 0.00 0.00 3.77
3116 7569 4.700700 AGTAGTGGTACCAAACTGTCAAC 58.299 43.478 23.81 11.15 0.00 3.18
3117 7570 5.104859 TGAAGTAGTGGTACCAAACTGTCAA 60.105 40.000 24.70 12.44 0.00 3.18
3118 7571 4.406326 TGAAGTAGTGGTACCAAACTGTCA 59.594 41.667 24.70 23.49 0.00 3.58
3119 7572 4.952460 TGAAGTAGTGGTACCAAACTGTC 58.048 43.478 24.70 21.98 0.00 3.51
3120 7573 5.129815 TCTTGAAGTAGTGGTACCAAACTGT 59.870 40.000 24.70 16.96 0.00 3.55
3121 7574 5.607477 TCTTGAAGTAGTGGTACCAAACTG 58.393 41.667 24.70 15.50 0.00 3.16
3122 7575 5.881923 TCTTGAAGTAGTGGTACCAAACT 57.118 39.130 18.31 19.66 0.00 2.66
3123 7576 6.592994 GGTATCTTGAAGTAGTGGTACCAAAC 59.407 42.308 18.31 17.65 32.58 2.93
3124 7577 6.296030 GGGTATCTTGAAGTAGTGGTACCAAA 60.296 42.308 18.31 4.96 33.67 3.28
3125 7578 5.188359 GGGTATCTTGAAGTAGTGGTACCAA 59.812 44.000 18.31 0.00 33.67 3.67
3126 7579 4.713321 GGGTATCTTGAAGTAGTGGTACCA 59.287 45.833 11.60 11.60 33.67 3.25
3127 7580 4.961099 AGGGTATCTTGAAGTAGTGGTACC 59.039 45.833 4.43 4.43 0.00 3.34
3128 7581 7.341512 AGTTAGGGTATCTTGAAGTAGTGGTAC 59.658 40.741 0.00 0.00 0.00 3.34
3129 7582 7.416731 AGTTAGGGTATCTTGAAGTAGTGGTA 58.583 38.462 0.00 0.00 0.00 3.25
3130 7583 6.262207 AGTTAGGGTATCTTGAAGTAGTGGT 58.738 40.000 0.00 0.00 0.00 4.16
3131 7584 6.793505 AGTTAGGGTATCTTGAAGTAGTGG 57.206 41.667 0.00 0.00 0.00 4.00
3132 7585 7.416022 CGTAGTTAGGGTATCTTGAAGTAGTG 58.584 42.308 0.00 0.00 0.00 2.74
3133 7586 6.545298 CCGTAGTTAGGGTATCTTGAAGTAGT 59.455 42.308 0.00 0.00 0.00 2.73
3134 7587 6.545298 ACCGTAGTTAGGGTATCTTGAAGTAG 59.455 42.308 1.85 0.00 42.19 2.57
3135 7588 6.426587 ACCGTAGTTAGGGTATCTTGAAGTA 58.573 40.000 1.85 0.00 42.19 2.24
3136 7589 5.267587 ACCGTAGTTAGGGTATCTTGAAGT 58.732 41.667 1.85 0.00 42.19 3.01
3137 7590 5.221204 GGACCGTAGTTAGGGTATCTTGAAG 60.221 48.000 3.68 0.00 43.84 3.02
3138 7591 4.646492 GGACCGTAGTTAGGGTATCTTGAA 59.354 45.833 3.68 0.00 43.84 2.69
3139 7592 4.210331 GGACCGTAGTTAGGGTATCTTGA 58.790 47.826 3.68 0.00 43.84 3.02
3140 7593 3.956199 TGGACCGTAGTTAGGGTATCTTG 59.044 47.826 3.68 0.00 43.84 3.02
3141 7594 3.956848 GTGGACCGTAGTTAGGGTATCTT 59.043 47.826 3.68 0.00 43.84 2.40
3142 7595 3.560105 GTGGACCGTAGTTAGGGTATCT 58.440 50.000 3.68 0.00 43.84 1.98
3143 7596 2.291741 CGTGGACCGTAGTTAGGGTATC 59.708 54.545 3.68 1.53 43.84 2.24
3144 7597 2.301346 CGTGGACCGTAGTTAGGGTAT 58.699 52.381 3.68 0.00 43.84 2.73
3145 7598 1.750193 CGTGGACCGTAGTTAGGGTA 58.250 55.000 3.68 0.00 43.84 3.69
3146 7599 2.571548 CGTGGACCGTAGTTAGGGT 58.428 57.895 3.33 3.33 46.22 4.34
3156 7609 1.007336 GTGAGCAAGTACGTGGACCG 61.007 60.000 10.87 0.00 44.03 4.79
3157 7610 0.032952 TGTGAGCAAGTACGTGGACC 59.967 55.000 10.87 0.00 0.00 4.46
3158 7611 1.137513 GTGTGAGCAAGTACGTGGAC 58.862 55.000 10.87 0.00 0.00 4.02
3159 7612 0.318360 CGTGTGAGCAAGTACGTGGA 60.318 55.000 10.87 0.00 0.00 4.02
3160 7613 1.282248 CCGTGTGAGCAAGTACGTGG 61.282 60.000 10.87 0.00 34.96 4.94
3161 7614 0.596600 ACCGTGTGAGCAAGTACGTG 60.597 55.000 4.24 4.24 34.96 4.49
3162 7615 0.103572 AACCGTGTGAGCAAGTACGT 59.896 50.000 0.00 0.00 34.96 3.57
3163 7616 0.782384 GAACCGTGTGAGCAAGTACG 59.218 55.000 0.00 0.00 36.39 3.67
3164 7617 1.525619 GTGAACCGTGTGAGCAAGTAC 59.474 52.381 0.00 0.00 0.00 2.73
3165 7618 1.411246 AGTGAACCGTGTGAGCAAGTA 59.589 47.619 0.00 0.00 0.00 2.24
3166 7619 0.178068 AGTGAACCGTGTGAGCAAGT 59.822 50.000 0.00 0.00 0.00 3.16
3167 7620 1.299541 AAGTGAACCGTGTGAGCAAG 58.700 50.000 0.00 0.00 0.00 4.01
3168 7621 1.400142 CAAAGTGAACCGTGTGAGCAA 59.600 47.619 0.00 0.00 0.00 3.91
3169 7622 1.013596 CAAAGTGAACCGTGTGAGCA 58.986 50.000 0.00 0.00 0.00 4.26
3170 7623 0.307760 CCAAAGTGAACCGTGTGAGC 59.692 55.000 0.00 0.00 0.00 4.26
3171 7624 1.597663 GACCAAAGTGAACCGTGTGAG 59.402 52.381 0.00 0.00 0.00 3.51
3172 7625 1.208535 AGACCAAAGTGAACCGTGTGA 59.791 47.619 0.00 0.00 0.00 3.58
3173 7626 1.663695 AGACCAAAGTGAACCGTGTG 58.336 50.000 0.00 0.00 0.00 3.82
3174 7627 3.764237 ATAGACCAAAGTGAACCGTGT 57.236 42.857 0.00 0.00 0.00 4.49
3175 7628 5.175859 ACATATAGACCAAAGTGAACCGTG 58.824 41.667 0.00 0.00 0.00 4.94
3176 7629 5.416271 ACATATAGACCAAAGTGAACCGT 57.584 39.130 0.00 0.00 0.00 4.83
3177 7630 5.457799 CGTACATATAGACCAAAGTGAACCG 59.542 44.000 0.00 0.00 0.00 4.44
3178 7631 6.335777 ACGTACATATAGACCAAAGTGAACC 58.664 40.000 0.00 0.00 0.00 3.62
3179 7632 7.823149 AACGTACATATAGACCAAAGTGAAC 57.177 36.000 0.00 0.00 0.00 3.18
3180 7633 8.836268 AAAACGTACATATAGACCAAAGTGAA 57.164 30.769 0.00 0.00 0.00 3.18
3181 7634 7.274033 CGAAAACGTACATATAGACCAAAGTGA 59.726 37.037 0.00 0.00 0.00 3.41
3182 7635 7.062605 ACGAAAACGTACATATAGACCAAAGTG 59.937 37.037 0.00 0.00 0.00 3.16
3183 7636 7.062605 CACGAAAACGTACATATAGACCAAAGT 59.937 37.037 0.00 0.00 0.00 2.66
3184 7637 7.062605 ACACGAAAACGTACATATAGACCAAAG 59.937 37.037 0.00 0.00 0.00 2.77
3185 7638 6.867816 ACACGAAAACGTACATATAGACCAAA 59.132 34.615 0.00 0.00 0.00 3.28
3186 7639 6.389091 ACACGAAAACGTACATATAGACCAA 58.611 36.000 0.00 0.00 0.00 3.67
3187 7640 5.953183 ACACGAAAACGTACATATAGACCA 58.047 37.500 0.00 0.00 0.00 4.02
3188 7641 6.139169 CGTACACGAAAACGTACATATAGACC 59.861 42.308 0.00 0.00 43.02 3.85
3189 7642 7.059682 CGTACACGAAAACGTACATATAGAC 57.940 40.000 0.00 0.00 43.02 2.59
3200 7653 3.830882 CAGCAAATACGTACACGAAAACG 59.169 43.478 9.04 0.00 44.47 3.60
3201 7654 4.837050 GTCAGCAAATACGTACACGAAAAC 59.163 41.667 9.04 0.00 43.02 2.43
3202 7655 4.746115 AGTCAGCAAATACGTACACGAAAA 59.254 37.500 9.04 0.00 43.02 2.29
3203 7656 4.300803 AGTCAGCAAATACGTACACGAAA 58.699 39.130 9.04 0.00 43.02 3.46
3204 7657 3.904571 AGTCAGCAAATACGTACACGAA 58.095 40.909 9.04 0.00 43.02 3.85
3205 7658 3.564235 AGTCAGCAAATACGTACACGA 57.436 42.857 9.04 0.00 43.02 4.35
3206 7659 3.181534 CCAAGTCAGCAAATACGTACACG 60.182 47.826 0.00 0.00 46.33 4.49
3207 7660 3.424433 GCCAAGTCAGCAAATACGTACAC 60.424 47.826 0.00 0.00 0.00 2.90
3208 7661 2.739913 GCCAAGTCAGCAAATACGTACA 59.260 45.455 0.00 0.00 0.00 2.90
3209 7662 2.095372 GGCCAAGTCAGCAAATACGTAC 59.905 50.000 0.00 0.00 0.00 3.67
3210 7663 2.352388 GGCCAAGTCAGCAAATACGTA 58.648 47.619 0.00 0.00 0.00 3.57
3211 7664 1.165270 GGCCAAGTCAGCAAATACGT 58.835 50.000 0.00 0.00 0.00 3.57
3212 7665 0.096976 CGGCCAAGTCAGCAAATACG 59.903 55.000 2.24 0.00 0.00 3.06
3213 7666 1.398390 CTCGGCCAAGTCAGCAAATAC 59.602 52.381 2.24 0.00 0.00 1.89
3214 7667 1.003118 ACTCGGCCAAGTCAGCAAATA 59.997 47.619 2.24 0.00 0.00 1.40
3215 7668 0.250901 ACTCGGCCAAGTCAGCAAAT 60.251 50.000 2.24 0.00 0.00 2.32
3216 7669 0.884704 GACTCGGCCAAGTCAGCAAA 60.885 55.000 19.30 0.00 44.20 3.68
3217 7670 1.301716 GACTCGGCCAAGTCAGCAA 60.302 57.895 19.30 0.00 44.20 3.91
3218 7671 2.343758 GACTCGGCCAAGTCAGCA 59.656 61.111 19.30 0.00 44.20 4.41
3222 7675 2.811317 CGCTGACTCGGCCAAGTC 60.811 66.667 17.42 17.42 44.87 3.01
3223 7676 4.379243 CCGCTGACTCGGCCAAGT 62.379 66.667 0.00 0.00 43.18 3.16
3240 7693 3.124921 TTAAAGCGAGCTGGCGGC 61.125 61.111 15.45 11.19 42.19 6.53
3241 7694 2.750888 GGTTAAAGCGAGCTGGCGG 61.751 63.158 15.45 0.00 38.18 6.13
3242 7695 2.785258 GGTTAAAGCGAGCTGGCG 59.215 61.111 15.45 2.34 38.18 5.69
3243 7696 2.785258 CGGTTAAAGCGAGCTGGC 59.215 61.111 13.51 13.51 42.41 4.85
3244 7697 2.750888 GGCGGTTAAAGCGAGCTGG 61.751 63.158 0.00 0.00 42.41 4.85
3245 7698 2.032634 TGGCGGTTAAAGCGAGCTG 61.033 57.895 0.00 0.00 42.41 4.24
3246 7699 2.033194 GTGGCGGTTAAAGCGAGCT 61.033 57.895 0.00 0.00 42.41 4.09
3247 7700 2.479198 GTGGCGGTTAAAGCGAGC 59.521 61.111 0.00 0.00 42.41 5.03
3248 7701 1.375523 AGGTGGCGGTTAAAGCGAG 60.376 57.895 0.00 0.00 42.41 5.03
3249 7702 1.669760 CAGGTGGCGGTTAAAGCGA 60.670 57.895 0.00 0.00 42.41 4.93
3250 7703 2.686816 CCAGGTGGCGGTTAAAGCG 61.687 63.158 0.00 0.00 42.73 4.68
3251 7704 1.583495 GACCAGGTGGCGGTTAAAGC 61.583 60.000 0.00 0.00 36.69 3.51
3252 7705 0.958876 GGACCAGGTGGCGGTTAAAG 60.959 60.000 0.00 0.00 36.69 1.85
3253 7706 1.073548 GGACCAGGTGGCGGTTAAA 59.926 57.895 0.00 0.00 36.69 1.52
3254 7707 2.751688 GGACCAGGTGGCGGTTAA 59.248 61.111 0.00 0.00 36.69 2.01
3636 8089 2.047274 CGACCAGGTCATGCCGTT 60.047 61.111 20.13 0.00 43.70 4.44
3637 8090 4.082523 CCGACCAGGTCATGCCGT 62.083 66.667 20.13 0.00 43.70 5.68
3654 8107 3.766496 GAAGAGGAGAGCGAGCGGC 62.766 68.421 0.00 0.00 44.05 6.53
3655 8108 2.411290 GAAGAGGAGAGCGAGCGG 59.589 66.667 0.00 0.00 0.00 5.52
3656 8109 2.058829 GAGGAAGAGGAGAGCGAGCG 62.059 65.000 0.00 0.00 0.00 5.03
3657 8110 0.751643 AGAGGAAGAGGAGAGCGAGC 60.752 60.000 0.00 0.00 0.00 5.03
3658 8111 1.308998 GAGAGGAAGAGGAGAGCGAG 58.691 60.000 0.00 0.00 0.00 5.03
3659 8112 0.106918 GGAGAGGAAGAGGAGAGCGA 60.107 60.000 0.00 0.00 0.00 4.93
3660 8113 0.106719 AGGAGAGGAAGAGGAGAGCG 60.107 60.000 0.00 0.00 0.00 5.03
3661 8114 1.692411 GAGGAGAGGAAGAGGAGAGC 58.308 60.000 0.00 0.00 0.00 4.09
3662 8115 1.133482 GGGAGGAGAGGAAGAGGAGAG 60.133 61.905 0.00 0.00 0.00 3.20
3663 8116 0.930726 GGGAGGAGAGGAAGAGGAGA 59.069 60.000 0.00 0.00 0.00 3.71
3664 8117 0.633921 TGGGAGGAGAGGAAGAGGAG 59.366 60.000 0.00 0.00 0.00 3.69
3665 8118 1.093408 TTGGGAGGAGAGGAAGAGGA 58.907 55.000 0.00 0.00 0.00 3.71
3666 8119 1.199615 GTTGGGAGGAGAGGAAGAGG 58.800 60.000 0.00 0.00 0.00 3.69
3667 8120 1.199615 GGTTGGGAGGAGAGGAAGAG 58.800 60.000 0.00 0.00 0.00 2.85
3668 8121 0.252742 GGGTTGGGAGGAGAGGAAGA 60.253 60.000 0.00 0.00 0.00 2.87
3669 8122 0.252927 AGGGTTGGGAGGAGAGGAAG 60.253 60.000 0.00 0.00 0.00 3.46
3670 8123 1.008449 CTAGGGTTGGGAGGAGAGGAA 59.992 57.143 0.00 0.00 0.00 3.36
3671 8124 0.637195 CTAGGGTTGGGAGGAGAGGA 59.363 60.000 0.00 0.00 0.00 3.71
3672 8125 1.051556 GCTAGGGTTGGGAGGAGAGG 61.052 65.000 0.00 0.00 0.00 3.69
3673 8126 1.051556 GGCTAGGGTTGGGAGGAGAG 61.052 65.000 0.00 0.00 0.00 3.20
3674 8127 1.003051 GGCTAGGGTTGGGAGGAGA 59.997 63.158 0.00 0.00 0.00 3.71
3675 8128 2.073101 GGGCTAGGGTTGGGAGGAG 61.073 68.421 0.00 0.00 0.00 3.69
3676 8129 2.042261 GGGCTAGGGTTGGGAGGA 59.958 66.667 0.00 0.00 0.00 3.71
3677 8130 1.928567 TTGGGCTAGGGTTGGGAGG 60.929 63.158 0.00 0.00 0.00 4.30
3678 8131 1.208165 AGTTGGGCTAGGGTTGGGAG 61.208 60.000 0.00 0.00 0.00 4.30
3679 8132 1.151677 AGTTGGGCTAGGGTTGGGA 60.152 57.895 0.00 0.00 0.00 4.37
3680 8133 1.303282 GAGTTGGGCTAGGGTTGGG 59.697 63.158 0.00 0.00 0.00 4.12
3681 8134 1.303282 GGAGTTGGGCTAGGGTTGG 59.697 63.158 0.00 0.00 0.00 3.77
3682 8135 1.303282 GGGAGTTGGGCTAGGGTTG 59.697 63.158 0.00 0.00 0.00 3.77
3683 8136 2.298661 CGGGAGTTGGGCTAGGGTT 61.299 63.158 0.00 0.00 0.00 4.11
3684 8137 2.687566 CGGGAGTTGGGCTAGGGT 60.688 66.667 0.00 0.00 0.00 4.34
3685 8138 2.687566 ACGGGAGTTGGGCTAGGG 60.688 66.667 0.00 0.00 43.33 3.53
3715 8168 1.153628 GTAGACGTCGGCAATGGCT 60.154 57.895 10.46 0.00 40.87 4.75
3716 8169 2.514013 CGTAGACGTCGGCAATGGC 61.514 63.158 10.46 0.00 35.18 4.40
3717 8170 2.514013 GCGTAGACGTCGGCAATGG 61.514 63.158 19.62 5.29 42.22 3.16
3718 8171 2.995482 GCGTAGACGTCGGCAATG 59.005 61.111 19.62 10.09 42.22 2.82
3722 8175 4.549516 GAGGGCGTAGACGTCGGC 62.550 72.222 17.31 17.31 41.95 5.54
3748 8201 4.114997 GGGCGTCGGCAATGGTTG 62.115 66.667 21.23 0.00 42.47 3.77
3749 8202 4.344865 AGGGCGTCGGCAATGGTT 62.345 61.111 21.23 0.00 42.47 3.67
3750 8203 4.778143 GAGGGCGTCGGCAATGGT 62.778 66.667 21.23 0.00 42.47 3.55
3752 8205 4.473520 AGGAGGGCGTCGGCAATG 62.474 66.667 21.23 0.00 42.47 2.82
3753 8206 4.162690 GAGGAGGGCGTCGGCAAT 62.163 66.667 21.23 8.35 42.47 3.56
3784 8237 3.642778 AAGACGACATGACGGCGGG 62.643 63.158 20.92 0.00 46.71 6.13
3785 8238 2.126071 AAGACGACATGACGGCGG 60.126 61.111 20.92 0.00 46.71 6.13
3786 8239 2.158959 GGAAGACGACATGACGGCG 61.159 63.158 20.92 4.80 46.71 6.46
3787 8240 1.078759 CTGGAAGACGACATGACGGC 61.079 60.000 20.92 18.58 42.10 5.68
3788 8241 1.078759 GCTGGAAGACGACATGACGG 61.079 60.000 20.92 3.30 34.07 4.79
3789 8242 0.109086 AGCTGGAAGACGACATGACG 60.109 55.000 15.87 15.87 34.07 4.35
3790 8243 1.634702 GAGCTGGAAGACGACATGAC 58.365 55.000 0.00 0.00 34.07 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.