Multiple sequence alignment - TraesCS1B01G235700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G235700 chr1B 100.000 2665 0 0 1 2665 422347970 422345306 0.000000e+00 4922
1 TraesCS1B01G235700 chr1B 85.360 444 56 5 2228 2665 674411586 674412026 4.050000e-123 451
2 TraesCS1B01G235700 chr1D 93.470 2236 93 28 1 2203 311751461 311749246 0.000000e+00 3271
3 TraesCS1B01G235700 chr1A 92.955 2257 86 27 1 2203 391942617 391940380 0.000000e+00 3219
4 TraesCS1B01G235700 chr3D 86.406 434 54 5 2229 2659 291369665 291370096 1.120000e-128 470
5 TraesCS1B01G235700 chr3D 84.932 146 20 2 1016 1160 453629849 453629993 2.140000e-31 147
6 TraesCS1B01G235700 chr3A 85.682 440 56 5 2227 2659 121085400 121085839 8.700000e-125 457
7 TraesCS1B01G235700 chr3A 84.932 146 20 2 1016 1160 595644600 595644744 2.140000e-31 147
8 TraesCS1B01G235700 chr3A 81.600 125 23 0 1247 1371 533131044 533130920 1.300000e-18 104
9 TraesCS1B01G235700 chr7D 85.682 440 53 7 2227 2659 85935336 85934900 3.130000e-124 455
10 TraesCS1B01G235700 chr3B 85.550 436 56 5 2229 2659 384435005 384434572 1.460000e-122 449
11 TraesCS1B01G235700 chr3B 84.932 146 20 2 1016 1160 596048080 596048224 2.140000e-31 147
12 TraesCS1B01G235700 chr2B 85.160 438 57 7 2229 2659 487098616 487098180 2.430000e-120 442
13 TraesCS1B01G235700 chr2B 84.318 440 58 9 2227 2659 657057048 657057483 1.140000e-113 420
14 TraesCS1B01G235700 chr2A 85.000 440 58 7 2227 2659 504542027 504542465 8.760000e-120 440
15 TraesCS1B01G235700 chr2D 84.510 439 61 6 2227 2659 349306924 349307361 6.820000e-116 427
16 TraesCS1B01G235700 chr4B 82.840 169 29 0 1244 1412 11905169 11905337 4.590000e-33 152
17 TraesCS1B01G235700 chr5D 82.558 172 24 5 1247 1415 245198929 245198761 2.140000e-31 147
18 TraesCS1B01G235700 chr5A 82.353 170 24 5 1249 1415 329240774 329240608 2.770000e-30 143
19 TraesCS1B01G235700 chr4D 81.657 169 31 0 1244 1412 6643363 6643531 9.950000e-30 141
20 TraesCS1B01G235700 chr7A 80.473 169 33 0 1244 1412 33148743 33148911 2.150000e-26 130
21 TraesCS1B01G235700 chr4A 80.723 166 32 0 1247 1412 596771009 596770844 2.150000e-26 130


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G235700 chr1B 422345306 422347970 2664 True 4922 4922 100.000 1 2665 1 chr1B.!!$R1 2664
1 TraesCS1B01G235700 chr1D 311749246 311751461 2215 True 3271 3271 93.470 1 2203 1 chr1D.!!$R1 2202
2 TraesCS1B01G235700 chr1A 391940380 391942617 2237 True 3219 3219 92.955 1 2203 1 chr1A.!!$R1 2202

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
707 747 0.463474 GCAGGGCATCTCTGGAGAAC 60.463 60.0 4.34 0.67 41.36 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2635 2694 0.034477 ATAAAGGTGGGGAGGCGTTG 60.034 55.0 0.0 0.0 0.0 4.1 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 0.820871 AAACGGTTTTGCCTTGCTGA 59.179 45.000 0.00 0.00 34.25 4.26
49 50 1.336887 GCTGAGCTGTACAAAGTCGGA 60.337 52.381 0.00 0.00 0.00 4.55
57 58 6.875076 AGCTGTACAAAGTCGGATAGTTAAT 58.125 36.000 0.00 0.00 0.00 1.40
119 139 4.021719 ACAGCAGATGAAGGAAAAACATGG 60.022 41.667 0.00 0.00 0.00 3.66
277 298 1.402968 GTACGTCGCTTGTATCCCTGA 59.597 52.381 0.00 0.00 0.00 3.86
372 393 3.366985 CCGTTGGTTCATTTTAGGCCTTC 60.367 47.826 12.58 0.00 0.00 3.46
629 650 4.662145 CCTCCGTGAAAAATTATGTCTGC 58.338 43.478 0.00 0.00 0.00 4.26
655 684 7.524038 CGCTGTCTAGATTAATTAAGCTACCCT 60.524 40.741 17.14 0.00 33.48 4.34
671 700 4.946157 GCTACCCTTTACCCTTTACTTTCC 59.054 45.833 0.00 0.00 0.00 3.13
672 701 5.515359 GCTACCCTTTACCCTTTACTTTCCA 60.515 44.000 0.00 0.00 0.00 3.53
673 702 4.994282 ACCCTTTACCCTTTACTTTCCAG 58.006 43.478 0.00 0.00 0.00 3.86
674 703 3.762288 CCCTTTACCCTTTACTTTCCAGC 59.238 47.826 0.00 0.00 0.00 4.85
675 704 4.508584 CCCTTTACCCTTTACTTTCCAGCT 60.509 45.833 0.00 0.00 0.00 4.24
676 705 5.280830 CCCTTTACCCTTTACTTTCCAGCTA 60.281 44.000 0.00 0.00 0.00 3.32
707 747 0.463474 GCAGGGCATCTCTGGAGAAC 60.463 60.000 4.34 0.67 41.36 3.01
918 963 1.142748 CCCAAGTGCTCTAGCTCCG 59.857 63.158 3.26 0.00 42.66 4.63
987 1032 2.235898 TGATACACTGCAGGCACATACA 59.764 45.455 19.93 6.44 0.00 2.29
1083 1128 2.530661 TTCGCCCCCTTCTTCCCA 60.531 61.111 0.00 0.00 0.00 4.37
1163 1208 2.224066 GCAAGATGCTCCTGGTACGTAT 60.224 50.000 0.00 0.00 40.96 3.06
1164 1209 3.005472 GCAAGATGCTCCTGGTACGTATA 59.995 47.826 0.00 0.00 40.96 1.47
1452 1497 3.695606 GAGACGGCTGCCAGTCCA 61.696 66.667 27.74 0.00 38.08 4.02
1526 1571 4.994201 GTCGACGACACCGCAGCA 62.994 66.667 22.66 0.00 39.95 4.41
1667 1712 3.694746 TCCCTGTGGACGTAGCTG 58.305 61.111 0.00 0.00 35.03 4.24
1692 1737 5.983720 GCTAGTCAAAGTCAACTTGTGTAGA 59.016 40.000 0.00 0.00 36.12 2.59
1754 1799 5.234329 AGGTTAATTGCGTTATGATGACTCG 59.766 40.000 0.00 0.00 0.00 4.18
1755 1800 5.432157 GTTAATTGCGTTATGATGACTCGG 58.568 41.667 0.00 0.00 0.00 4.63
1756 1801 1.286501 TTGCGTTATGATGACTCGGC 58.713 50.000 0.00 0.00 0.00 5.54
1790 1845 8.608844 TTTTACATTTTGAACTCTCTCTCTCC 57.391 34.615 0.00 0.00 0.00 3.71
1791 1846 4.815269 ACATTTTGAACTCTCTCTCTCCG 58.185 43.478 0.00 0.00 0.00 4.63
1815 1870 0.465460 TCCCTGCTGGTGTTGTTGTC 60.465 55.000 9.00 0.00 34.77 3.18
1844 1902 7.016153 AGGTGTTTGATCCAGAATTAGTACA 57.984 36.000 0.00 0.00 0.00 2.90
1859 1917 8.680903 AGAATTAGTACAAGATCCATGCTTTTG 58.319 33.333 0.00 0.00 0.00 2.44
1919 1977 5.492895 TCACGCCCTGTTTGATAGATAAAA 58.507 37.500 0.00 0.00 0.00 1.52
1948 2007 9.453572 ACGATCATATAATCCAAAGCATACAAT 57.546 29.630 0.00 0.00 0.00 2.71
1958 2017 4.406069 CAAAGCATACAATTCTGACACCG 58.594 43.478 0.00 0.00 0.00 4.94
1970 2029 1.163420 TGACACCGCAACACACATCC 61.163 55.000 0.00 0.00 0.00 3.51
1975 2034 1.667830 CGCAACACACATCCGAGGT 60.668 57.895 0.00 0.00 0.00 3.85
2004 2063 6.764308 ACAACAATGCATAAGAACAGCTAT 57.236 33.333 0.00 0.00 0.00 2.97
2022 2081 1.009997 ATGACATCACCCCAACCCAT 58.990 50.000 0.00 0.00 0.00 4.00
2066 2125 4.590918 TGAAGATGTCGGAGTTCTCTACT 58.409 43.478 0.00 0.00 40.71 2.57
2073 2132 3.252701 GTCGGAGTTCTCTACTGTGACAA 59.747 47.826 0.00 0.00 37.47 3.18
2097 2156 3.181486 GGTGTCATGAAGAGACGATGCTA 60.181 47.826 0.00 0.00 41.24 3.49
2128 2187 1.002430 GCTGTGGACTCCAAGACATCA 59.998 52.381 0.00 0.00 34.18 3.07
2141 2200 6.778821 TCCAAGACATCACCTTCATAAAAGA 58.221 36.000 0.00 0.00 0.00 2.52
2200 2259 6.493189 AAAGATTAAGGTTTTTGCCCTGAA 57.507 33.333 0.00 0.00 30.99 3.02
2203 2262 2.979814 AAGGTTTTTGCCCTGAACAC 57.020 45.000 0.00 0.00 30.99 3.32
2204 2263 1.119684 AGGTTTTTGCCCTGAACACC 58.880 50.000 0.00 0.00 0.00 4.16
2205 2264 0.249280 GGTTTTTGCCCTGAACACCG 60.249 55.000 0.00 0.00 0.00 4.94
2206 2265 0.874175 GTTTTTGCCCTGAACACCGC 60.874 55.000 0.00 0.00 0.00 5.68
2207 2266 1.323271 TTTTTGCCCTGAACACCGCA 61.323 50.000 0.00 0.00 0.00 5.69
2208 2267 1.323271 TTTTGCCCTGAACACCGCAA 61.323 50.000 0.00 0.00 39.35 4.85
2209 2268 2.010582 TTTGCCCTGAACACCGCAAC 62.011 55.000 0.00 0.00 40.71 4.17
2210 2269 2.904866 GCCCTGAACACCGCAACA 60.905 61.111 0.00 0.00 0.00 3.33
2211 2270 3.030652 CCCTGAACACCGCAACAC 58.969 61.111 0.00 0.00 0.00 3.32
2212 2271 1.525995 CCCTGAACACCGCAACACT 60.526 57.895 0.00 0.00 0.00 3.55
2213 2272 1.507141 CCCTGAACACCGCAACACTC 61.507 60.000 0.00 0.00 0.00 3.51
2214 2273 0.813610 CCTGAACACCGCAACACTCA 60.814 55.000 0.00 0.00 0.00 3.41
2215 2274 1.229428 CTGAACACCGCAACACTCAT 58.771 50.000 0.00 0.00 0.00 2.90
2216 2275 2.412870 CTGAACACCGCAACACTCATA 58.587 47.619 0.00 0.00 0.00 2.15
2217 2276 2.412870 TGAACACCGCAACACTCATAG 58.587 47.619 0.00 0.00 0.00 2.23
2218 2277 1.732259 GAACACCGCAACACTCATAGG 59.268 52.381 0.00 0.00 0.00 2.57
2219 2278 0.036388 ACACCGCAACACTCATAGGG 60.036 55.000 0.00 0.00 0.00 3.53
2220 2279 0.249120 CACCGCAACACTCATAGGGA 59.751 55.000 0.00 0.00 0.00 4.20
2221 2280 1.134401 CACCGCAACACTCATAGGGAT 60.134 52.381 0.00 0.00 0.00 3.85
2222 2281 1.139058 ACCGCAACACTCATAGGGATC 59.861 52.381 0.00 0.00 0.00 3.36
2223 2282 1.138859 CCGCAACACTCATAGGGATCA 59.861 52.381 0.00 0.00 0.00 2.92
2224 2283 2.224378 CCGCAACACTCATAGGGATCAT 60.224 50.000 0.00 0.00 0.00 2.45
2225 2284 3.470709 CGCAACACTCATAGGGATCATT 58.529 45.455 0.00 0.00 0.00 2.57
2226 2285 4.503123 CCGCAACACTCATAGGGATCATTA 60.503 45.833 0.00 0.00 0.00 1.90
2227 2286 4.449068 CGCAACACTCATAGGGATCATTAC 59.551 45.833 0.00 0.00 0.00 1.89
2228 2287 5.615289 GCAACACTCATAGGGATCATTACT 58.385 41.667 0.00 0.00 0.00 2.24
2229 2288 5.468072 GCAACACTCATAGGGATCATTACTG 59.532 44.000 0.00 0.00 0.00 2.74
2230 2289 6.686378 GCAACACTCATAGGGATCATTACTGA 60.686 42.308 0.00 0.00 35.41 3.41
2231 2290 7.448420 CAACACTCATAGGGATCATTACTGAT 58.552 38.462 0.00 0.00 44.93 2.90
2232 2291 7.002250 ACACTCATAGGGATCATTACTGATG 57.998 40.000 0.00 0.00 42.27 3.07
2233 2292 6.013898 ACACTCATAGGGATCATTACTGATGG 60.014 42.308 0.00 0.00 42.27 3.51
2234 2293 5.486775 ACTCATAGGGATCATTACTGATGGG 59.513 44.000 0.00 0.00 42.27 4.00
2235 2294 4.784838 TCATAGGGATCATTACTGATGGGG 59.215 45.833 0.00 0.00 42.27 4.96
2236 2295 3.367280 AGGGATCATTACTGATGGGGA 57.633 47.619 0.00 0.00 42.27 4.81
2237 2296 3.680169 AGGGATCATTACTGATGGGGAA 58.320 45.455 0.00 0.00 42.27 3.97
2238 2297 3.395941 AGGGATCATTACTGATGGGGAAC 59.604 47.826 0.00 0.00 42.27 3.62
2239 2298 3.403038 GGATCATTACTGATGGGGAACG 58.597 50.000 0.00 0.00 42.27 3.95
2240 2299 3.071023 GGATCATTACTGATGGGGAACGA 59.929 47.826 0.00 0.00 42.27 3.85
2241 2300 4.444306 GGATCATTACTGATGGGGAACGAA 60.444 45.833 0.00 0.00 42.27 3.85
2242 2301 4.137116 TCATTACTGATGGGGAACGAAG 57.863 45.455 0.00 0.00 36.37 3.79
2243 2302 2.396590 TTACTGATGGGGAACGAAGC 57.603 50.000 0.00 0.00 0.00 3.86
2244 2303 1.271856 TACTGATGGGGAACGAAGCA 58.728 50.000 0.00 0.00 0.00 3.91
2245 2304 0.620556 ACTGATGGGGAACGAAGCAT 59.379 50.000 0.00 0.00 0.00 3.79
2246 2305 1.019673 CTGATGGGGAACGAAGCATG 58.980 55.000 0.00 0.00 0.00 4.06
2247 2306 0.617935 TGATGGGGAACGAAGCATGA 59.382 50.000 0.00 0.00 0.00 3.07
2248 2307 1.004161 TGATGGGGAACGAAGCATGAA 59.996 47.619 0.00 0.00 0.00 2.57
2249 2308 2.091541 GATGGGGAACGAAGCATGAAA 58.908 47.619 0.00 0.00 0.00 2.69
2250 2309 1.988293 TGGGGAACGAAGCATGAAAA 58.012 45.000 0.00 0.00 0.00 2.29
2251 2310 2.524306 TGGGGAACGAAGCATGAAAAT 58.476 42.857 0.00 0.00 0.00 1.82
2252 2311 3.691575 TGGGGAACGAAGCATGAAAATA 58.308 40.909 0.00 0.00 0.00 1.40
2253 2312 4.082845 TGGGGAACGAAGCATGAAAATAA 58.917 39.130 0.00 0.00 0.00 1.40
2254 2313 4.524714 TGGGGAACGAAGCATGAAAATAAA 59.475 37.500 0.00 0.00 0.00 1.40
2255 2314 5.011125 TGGGGAACGAAGCATGAAAATAAAA 59.989 36.000 0.00 0.00 0.00 1.52
2256 2315 5.929415 GGGGAACGAAGCATGAAAATAAAAA 59.071 36.000 0.00 0.00 0.00 1.94
2277 2336 6.800072 AAAAATCCTACAAAACACCCAAGA 57.200 33.333 0.00 0.00 0.00 3.02
2278 2337 6.994421 AAAATCCTACAAAACACCCAAGAT 57.006 33.333 0.00 0.00 0.00 2.40
2279 2338 6.590234 AAATCCTACAAAACACCCAAGATC 57.410 37.500 0.00 0.00 0.00 2.75
2280 2339 4.028993 TCCTACAAAACACCCAAGATCC 57.971 45.455 0.00 0.00 0.00 3.36
2281 2340 3.396276 TCCTACAAAACACCCAAGATCCA 59.604 43.478 0.00 0.00 0.00 3.41
2282 2341 4.141135 TCCTACAAAACACCCAAGATCCAA 60.141 41.667 0.00 0.00 0.00 3.53
2283 2342 4.772100 CCTACAAAACACCCAAGATCCAAT 59.228 41.667 0.00 0.00 0.00 3.16
2284 2343 4.871933 ACAAAACACCCAAGATCCAATC 57.128 40.909 0.00 0.00 0.00 2.67
2285 2344 4.482990 ACAAAACACCCAAGATCCAATCT 58.517 39.130 0.00 0.00 42.61 2.40
2286 2345 5.640147 ACAAAACACCCAAGATCCAATCTA 58.360 37.500 0.00 0.00 39.08 1.98
2287 2346 5.711976 ACAAAACACCCAAGATCCAATCTAG 59.288 40.000 0.00 0.00 39.08 2.43
2288 2347 4.510167 AACACCCAAGATCCAATCTAGG 57.490 45.455 0.00 5.00 39.08 3.02
2289 2348 3.736094 ACACCCAAGATCCAATCTAGGA 58.264 45.455 11.09 0.00 39.08 2.94
2290 2349 3.713764 ACACCCAAGATCCAATCTAGGAG 59.286 47.826 11.09 7.14 41.90 3.69
2291 2350 3.969976 CACCCAAGATCCAATCTAGGAGA 59.030 47.826 11.09 0.00 41.90 3.71
2292 2351 4.596643 CACCCAAGATCCAATCTAGGAGAT 59.403 45.833 11.09 0.00 41.90 2.75
2293 2352 4.596643 ACCCAAGATCCAATCTAGGAGATG 59.403 45.833 11.09 0.00 41.90 2.90
2294 2353 4.565236 CCCAAGATCCAATCTAGGAGATGC 60.565 50.000 0.00 0.00 41.90 3.91
2295 2354 4.041321 CCAAGATCCAATCTAGGAGATGCA 59.959 45.833 0.00 0.00 41.90 3.96
2296 2355 5.280573 CCAAGATCCAATCTAGGAGATGCAT 60.281 44.000 0.00 0.00 41.90 3.96
2297 2356 6.070366 CCAAGATCCAATCTAGGAGATGCATA 60.070 42.308 0.00 0.00 41.90 3.14
2298 2357 6.795144 AGATCCAATCTAGGAGATGCATAG 57.205 41.667 0.00 0.00 41.90 2.23
2299 2358 4.815533 TCCAATCTAGGAGATGCATAGC 57.184 45.455 0.00 0.00 34.65 2.97
2300 2359 4.423913 TCCAATCTAGGAGATGCATAGCT 58.576 43.478 0.00 0.00 34.65 3.32
2301 2360 5.583932 TCCAATCTAGGAGATGCATAGCTA 58.416 41.667 0.00 0.00 34.65 3.32
2302 2361 5.420421 TCCAATCTAGGAGATGCATAGCTAC 59.580 44.000 0.00 0.00 34.65 3.58
2303 2362 5.339177 CAATCTAGGAGATGCATAGCTACG 58.661 45.833 0.00 0.00 34.65 3.51
2304 2363 3.348119 TCTAGGAGATGCATAGCTACGG 58.652 50.000 0.00 0.00 31.12 4.02
2305 2364 1.261480 AGGAGATGCATAGCTACGGG 58.739 55.000 0.00 0.00 0.00 5.28
2306 2365 1.203063 AGGAGATGCATAGCTACGGGA 60.203 52.381 0.00 0.00 0.00 5.14
2307 2366 1.203523 GGAGATGCATAGCTACGGGAG 59.796 57.143 0.00 0.00 0.00 4.30
2308 2367 2.163509 GAGATGCATAGCTACGGGAGA 58.836 52.381 0.00 0.00 0.00 3.71
2309 2368 2.558795 GAGATGCATAGCTACGGGAGAA 59.441 50.000 0.00 0.00 0.00 2.87
2310 2369 2.965831 AGATGCATAGCTACGGGAGAAA 59.034 45.455 0.00 0.00 0.00 2.52
2311 2370 3.388024 AGATGCATAGCTACGGGAGAAAA 59.612 43.478 0.00 0.00 0.00 2.29
2312 2371 3.179443 TGCATAGCTACGGGAGAAAAG 57.821 47.619 0.00 0.00 0.00 2.27
2313 2372 2.500098 TGCATAGCTACGGGAGAAAAGT 59.500 45.455 0.00 0.00 0.00 2.66
2314 2373 2.866762 GCATAGCTACGGGAGAAAAGTG 59.133 50.000 0.00 0.00 0.00 3.16
2315 2374 3.679083 GCATAGCTACGGGAGAAAAGTGT 60.679 47.826 0.00 0.00 0.00 3.55
2316 2375 2.457366 AGCTACGGGAGAAAAGTGTG 57.543 50.000 0.00 0.00 0.00 3.82
2317 2376 1.692519 AGCTACGGGAGAAAAGTGTGT 59.307 47.619 0.00 0.00 0.00 3.72
2318 2377 2.104281 AGCTACGGGAGAAAAGTGTGTT 59.896 45.455 0.00 0.00 0.00 3.32
2319 2378 2.479275 GCTACGGGAGAAAAGTGTGTTC 59.521 50.000 0.00 0.00 0.00 3.18
2320 2379 2.702592 ACGGGAGAAAAGTGTGTTCA 57.297 45.000 0.00 0.00 0.00 3.18
2321 2380 2.285977 ACGGGAGAAAAGTGTGTTCAC 58.714 47.619 0.00 0.00 44.15 3.18
2322 2381 2.285083 CGGGAGAAAAGTGTGTTCACA 58.715 47.619 1.23 1.23 46.01 3.58
2323 2382 2.878406 CGGGAGAAAAGTGTGTTCACAT 59.122 45.455 8.87 0.00 46.01 3.21
2324 2383 4.062293 CGGGAGAAAAGTGTGTTCACATA 58.938 43.478 8.87 0.00 46.01 2.29
2325 2384 4.084013 CGGGAGAAAAGTGTGTTCACATAC 60.084 45.833 8.87 1.63 46.01 2.39
2326 2385 4.215613 GGGAGAAAAGTGTGTTCACATACC 59.784 45.833 8.87 0.00 46.01 2.73
2327 2386 4.215613 GGAGAAAAGTGTGTTCACATACCC 59.784 45.833 8.87 0.00 46.01 3.69
2328 2387 5.048846 AGAAAAGTGTGTTCACATACCCT 57.951 39.130 8.87 0.00 46.01 4.34
2329 2388 5.445964 AGAAAAGTGTGTTCACATACCCTT 58.554 37.500 8.87 5.09 46.01 3.95
2330 2389 5.891551 AGAAAAGTGTGTTCACATACCCTTT 59.108 36.000 8.87 10.17 46.01 3.11
2331 2390 6.379988 AGAAAAGTGTGTTCACATACCCTTTT 59.620 34.615 20.91 20.91 46.01 2.27
2332 2391 7.558444 AGAAAAGTGTGTTCACATACCCTTTTA 59.442 33.333 20.86 0.00 46.01 1.52
2333 2392 6.877611 AAGTGTGTTCACATACCCTTTTAG 57.122 37.500 8.87 0.00 46.01 1.85
2334 2393 6.182507 AGTGTGTTCACATACCCTTTTAGA 57.817 37.500 8.87 0.00 46.01 2.10
2335 2394 5.995897 AGTGTGTTCACATACCCTTTTAGAC 59.004 40.000 8.87 0.00 46.01 2.59
2336 2395 5.180680 GTGTGTTCACATACCCTTTTAGACC 59.819 44.000 8.87 0.00 43.37 3.85
2337 2396 4.390909 GTGTTCACATACCCTTTTAGACCG 59.609 45.833 0.00 0.00 0.00 4.79
2338 2397 4.283978 TGTTCACATACCCTTTTAGACCGA 59.716 41.667 0.00 0.00 0.00 4.69
2339 2398 5.221682 TGTTCACATACCCTTTTAGACCGAA 60.222 40.000 0.00 0.00 0.00 4.30
2340 2399 5.486735 TCACATACCCTTTTAGACCGAAA 57.513 39.130 0.00 0.00 0.00 3.46
2341 2400 5.484715 TCACATACCCTTTTAGACCGAAAG 58.515 41.667 0.00 0.00 34.63 2.62
2342 2401 4.094442 CACATACCCTTTTAGACCGAAAGC 59.906 45.833 0.00 0.00 33.75 3.51
2343 2402 1.804601 ACCCTTTTAGACCGAAAGCG 58.195 50.000 0.00 0.00 33.75 4.68
2344 2403 1.071228 ACCCTTTTAGACCGAAAGCGT 59.929 47.619 0.00 0.00 33.75 5.07
2345 2404 2.148768 CCCTTTTAGACCGAAAGCGTT 58.851 47.619 0.00 0.00 33.75 4.84
2346 2405 3.244181 ACCCTTTTAGACCGAAAGCGTTA 60.244 43.478 0.00 0.00 33.75 3.18
2347 2406 3.370061 CCCTTTTAGACCGAAAGCGTTAG 59.630 47.826 0.00 0.00 33.75 2.34
2348 2407 3.181523 CCTTTTAGACCGAAAGCGTTAGC 60.182 47.826 0.00 0.00 45.58 3.09
2367 2426 1.411394 CGTCGTAACGTGGTTGATGT 58.589 50.000 0.00 0.00 43.94 3.06
2368 2427 2.583739 CGTCGTAACGTGGTTGATGTA 58.416 47.619 0.00 0.00 43.94 2.29
2369 2428 2.591148 CGTCGTAACGTGGTTGATGTAG 59.409 50.000 0.00 0.00 43.94 2.74
2370 2429 3.568538 GTCGTAACGTGGTTGATGTAGT 58.431 45.455 0.00 0.00 0.00 2.73
2371 2430 3.605486 GTCGTAACGTGGTTGATGTAGTC 59.395 47.826 0.00 0.00 0.00 2.59
2372 2431 2.591148 CGTAACGTGGTTGATGTAGTCG 59.409 50.000 0.00 0.00 0.00 4.18
2373 2432 2.806608 AACGTGGTTGATGTAGTCGT 57.193 45.000 0.00 0.00 0.00 4.34
2374 2433 3.921119 AACGTGGTTGATGTAGTCGTA 57.079 42.857 0.00 0.00 0.00 3.43
2375 2434 3.207474 ACGTGGTTGATGTAGTCGTAC 57.793 47.619 0.00 0.00 0.00 3.67
2376 2435 2.816087 ACGTGGTTGATGTAGTCGTACT 59.184 45.455 0.00 0.00 0.00 2.73
2377 2436 3.120060 ACGTGGTTGATGTAGTCGTACTC 60.120 47.826 0.00 0.00 0.00 2.59
2378 2437 3.126514 CGTGGTTGATGTAGTCGTACTCT 59.873 47.826 0.00 0.00 0.00 3.24
2379 2438 4.379186 CGTGGTTGATGTAGTCGTACTCTT 60.379 45.833 0.00 0.00 0.00 2.85
2380 2439 5.094134 GTGGTTGATGTAGTCGTACTCTTC 58.906 45.833 0.00 0.00 0.00 2.87
2381 2440 4.763279 TGGTTGATGTAGTCGTACTCTTCA 59.237 41.667 0.00 0.00 0.00 3.02
2382 2441 5.094134 GGTTGATGTAGTCGTACTCTTCAC 58.906 45.833 0.00 0.00 0.00 3.18
2383 2442 5.106237 GGTTGATGTAGTCGTACTCTTCACT 60.106 44.000 0.00 0.00 0.00 3.41
2384 2443 6.093219 GGTTGATGTAGTCGTACTCTTCACTA 59.907 42.308 0.00 0.00 0.00 2.74
2385 2444 7.201714 GGTTGATGTAGTCGTACTCTTCACTAT 60.202 40.741 0.00 0.00 0.00 2.12
2386 2445 7.479897 TGATGTAGTCGTACTCTTCACTATC 57.520 40.000 0.00 0.00 0.00 2.08
2387 2446 6.482641 TGATGTAGTCGTACTCTTCACTATCC 59.517 42.308 0.00 0.00 0.00 2.59
2388 2447 5.737860 TGTAGTCGTACTCTTCACTATCCA 58.262 41.667 0.00 0.00 0.00 3.41
2389 2448 6.175471 TGTAGTCGTACTCTTCACTATCCAA 58.825 40.000 0.00 0.00 0.00 3.53
2390 2449 6.827251 TGTAGTCGTACTCTTCACTATCCAAT 59.173 38.462 0.00 0.00 0.00 3.16
2391 2450 6.380095 AGTCGTACTCTTCACTATCCAATC 57.620 41.667 0.00 0.00 0.00 2.67
2392 2451 5.886474 AGTCGTACTCTTCACTATCCAATCA 59.114 40.000 0.00 0.00 0.00 2.57
2393 2452 5.972382 GTCGTACTCTTCACTATCCAATCAC 59.028 44.000 0.00 0.00 0.00 3.06
2394 2453 4.970611 CGTACTCTTCACTATCCAATCACG 59.029 45.833 0.00 0.00 0.00 4.35
2395 2454 5.220796 CGTACTCTTCACTATCCAATCACGA 60.221 44.000 0.00 0.00 0.00 4.35
2396 2455 5.860941 ACTCTTCACTATCCAATCACGAT 57.139 39.130 0.00 0.00 0.00 3.73
2397 2456 5.837437 ACTCTTCACTATCCAATCACGATC 58.163 41.667 0.00 0.00 0.00 3.69
2398 2457 5.201713 TCTTCACTATCCAATCACGATCC 57.798 43.478 0.00 0.00 0.00 3.36
2399 2458 4.649218 TCTTCACTATCCAATCACGATCCA 59.351 41.667 0.00 0.00 0.00 3.41
2400 2459 5.128663 TCTTCACTATCCAATCACGATCCAA 59.871 40.000 0.00 0.00 0.00 3.53
2401 2460 5.551305 TCACTATCCAATCACGATCCAAT 57.449 39.130 0.00 0.00 0.00 3.16
2402 2461 5.541845 TCACTATCCAATCACGATCCAATC 58.458 41.667 0.00 0.00 0.00 2.67
2403 2462 4.692625 CACTATCCAATCACGATCCAATCC 59.307 45.833 0.00 0.00 0.00 3.01
2404 2463 2.238942 TCCAATCACGATCCAATCCG 57.761 50.000 0.00 0.00 0.00 4.18
2405 2464 1.760029 TCCAATCACGATCCAATCCGA 59.240 47.619 0.00 0.00 0.00 4.55
2406 2465 2.368548 TCCAATCACGATCCAATCCGAT 59.631 45.455 0.00 0.00 0.00 4.18
2407 2466 2.738846 CCAATCACGATCCAATCCGATC 59.261 50.000 0.00 0.00 36.16 3.69
2408 2467 3.555795 CCAATCACGATCCAATCCGATCT 60.556 47.826 0.00 0.00 37.16 2.75
2409 2468 4.321974 CCAATCACGATCCAATCCGATCTA 60.322 45.833 0.00 0.00 37.16 1.98
2410 2469 4.710423 ATCACGATCCAATCCGATCTAG 57.290 45.455 0.00 0.00 37.16 2.43
2411 2470 2.229062 TCACGATCCAATCCGATCTAGC 59.771 50.000 0.00 0.00 37.16 3.42
2412 2471 1.200252 ACGATCCAATCCGATCTAGCG 59.800 52.381 0.00 0.00 37.16 4.26
2413 2472 1.200252 CGATCCAATCCGATCTAGCGT 59.800 52.381 0.00 0.00 37.16 5.07
2414 2473 2.729467 CGATCCAATCCGATCTAGCGTC 60.729 54.545 0.00 0.00 37.16 5.19
2415 2474 1.687563 TCCAATCCGATCTAGCGTCA 58.312 50.000 0.00 0.00 0.00 4.35
2416 2475 2.028876 TCCAATCCGATCTAGCGTCAA 58.971 47.619 0.00 0.00 0.00 3.18
2417 2476 2.429250 TCCAATCCGATCTAGCGTCAAA 59.571 45.455 0.00 0.00 0.00 2.69
2418 2477 2.540101 CCAATCCGATCTAGCGTCAAAC 59.460 50.000 0.00 0.00 0.00 2.93
2419 2478 2.121116 ATCCGATCTAGCGTCAAACG 57.879 50.000 0.00 0.00 45.88 3.60
2420 2479 0.099968 TCCGATCTAGCGTCAAACGG 59.900 55.000 0.00 0.00 42.82 4.44
2421 2480 0.099968 CCGATCTAGCGTCAAACGGA 59.900 55.000 0.00 0.00 42.82 4.69
2422 2481 1.189403 CGATCTAGCGTCAAACGGAC 58.811 55.000 1.33 0.00 42.82 4.79
2429 2488 2.280592 GTCAAACGGACGGCACCT 60.281 61.111 0.00 0.00 36.65 4.00
2430 2489 2.029964 TCAAACGGACGGCACCTC 59.970 61.111 0.00 0.00 0.00 3.85
2431 2490 3.047877 CAAACGGACGGCACCTCC 61.048 66.667 0.00 0.00 0.00 4.30
2441 2500 3.780624 GGCACCTCCGACATTACAT 57.219 52.632 0.00 0.00 0.00 2.29
2442 2501 1.299541 GGCACCTCCGACATTACATG 58.700 55.000 0.00 0.00 0.00 3.21
2444 2503 1.665679 GCACCTCCGACATTACATGTG 59.334 52.381 9.11 0.00 45.03 3.21
2445 2504 2.935238 GCACCTCCGACATTACATGTGT 60.935 50.000 9.11 0.00 45.03 3.72
2446 2505 3.334691 CACCTCCGACATTACATGTGTT 58.665 45.455 9.11 0.00 45.03 3.32
2447 2506 3.751175 CACCTCCGACATTACATGTGTTT 59.249 43.478 9.11 0.00 45.03 2.83
2448 2507 4.932799 CACCTCCGACATTACATGTGTTTA 59.067 41.667 9.11 0.00 45.03 2.01
2449 2508 5.063438 CACCTCCGACATTACATGTGTTTAG 59.937 44.000 9.11 0.00 45.03 1.85
2450 2509 4.034048 CCTCCGACATTACATGTGTTTAGC 59.966 45.833 9.11 0.00 45.03 3.09
2451 2510 4.827692 TCCGACATTACATGTGTTTAGCT 58.172 39.130 9.11 0.00 45.03 3.32
2452 2511 4.868171 TCCGACATTACATGTGTTTAGCTC 59.132 41.667 9.11 0.00 45.03 4.09
2453 2512 4.259810 CCGACATTACATGTGTTTAGCTCG 60.260 45.833 9.11 5.49 45.03 5.03
2454 2513 4.561213 CGACATTACATGTGTTTAGCTCGA 59.439 41.667 9.11 0.00 45.03 4.04
2455 2514 5.232202 CGACATTACATGTGTTTAGCTCGAT 59.768 40.000 9.11 0.00 45.03 3.59
2456 2515 6.349973 ACATTACATGTGTTTAGCTCGATG 57.650 37.500 9.11 0.47 43.01 3.84
2457 2516 5.294306 ACATTACATGTGTTTAGCTCGATGG 59.706 40.000 9.11 0.00 43.01 3.51
2458 2517 3.334583 ACATGTGTTTAGCTCGATGGT 57.665 42.857 0.00 0.00 0.00 3.55
2459 2518 3.002791 ACATGTGTTTAGCTCGATGGTG 58.997 45.455 0.00 0.00 0.00 4.17
2460 2519 2.831685 TGTGTTTAGCTCGATGGTGT 57.168 45.000 0.00 0.00 0.00 4.16
2461 2520 2.683968 TGTGTTTAGCTCGATGGTGTC 58.316 47.619 0.00 0.00 0.00 3.67
2462 2521 2.000447 GTGTTTAGCTCGATGGTGTCC 59.000 52.381 0.00 0.00 0.00 4.02
2463 2522 1.899814 TGTTTAGCTCGATGGTGTCCT 59.100 47.619 0.00 0.00 0.00 3.85
2464 2523 2.094182 TGTTTAGCTCGATGGTGTCCTC 60.094 50.000 0.00 0.00 0.00 3.71
2465 2524 2.145397 TTAGCTCGATGGTGTCCTCT 57.855 50.000 0.00 0.00 0.00 3.69
2466 2525 1.681538 TAGCTCGATGGTGTCCTCTC 58.318 55.000 0.00 0.00 0.00 3.20
2467 2526 1.040339 AGCTCGATGGTGTCCTCTCC 61.040 60.000 0.00 0.00 0.00 3.71
2468 2527 1.040339 GCTCGATGGTGTCCTCTCCT 61.040 60.000 0.00 0.00 0.00 3.69
2469 2528 1.479709 CTCGATGGTGTCCTCTCCTT 58.520 55.000 0.00 0.00 0.00 3.36
2470 2529 1.407258 CTCGATGGTGTCCTCTCCTTC 59.593 57.143 0.00 0.00 0.00 3.46
2471 2530 1.006043 TCGATGGTGTCCTCTCCTTCT 59.994 52.381 0.00 0.00 32.67 2.85
2472 2531 1.827969 CGATGGTGTCCTCTCCTTCTT 59.172 52.381 0.00 0.00 32.67 2.52
2473 2532 2.417924 CGATGGTGTCCTCTCCTTCTTG 60.418 54.545 0.00 0.00 32.67 3.02
2474 2533 2.398754 TGGTGTCCTCTCCTTCTTGA 57.601 50.000 0.00 0.00 0.00 3.02
2475 2534 2.907892 TGGTGTCCTCTCCTTCTTGAT 58.092 47.619 0.00 0.00 0.00 2.57
2476 2535 2.834549 TGGTGTCCTCTCCTTCTTGATC 59.165 50.000 0.00 0.00 0.00 2.92
2477 2536 2.169561 GGTGTCCTCTCCTTCTTGATCC 59.830 54.545 0.00 0.00 0.00 3.36
2478 2537 2.834549 GTGTCCTCTCCTTCTTGATCCA 59.165 50.000 0.00 0.00 0.00 3.41
2479 2538 3.102972 TGTCCTCTCCTTCTTGATCCAG 58.897 50.000 0.00 0.00 0.00 3.86
2480 2539 2.114616 TCCTCTCCTTCTTGATCCAGC 58.885 52.381 0.00 0.00 0.00 4.85
2481 2540 1.836166 CCTCTCCTTCTTGATCCAGCA 59.164 52.381 0.00 0.00 0.00 4.41
2482 2541 2.238144 CCTCTCCTTCTTGATCCAGCAA 59.762 50.000 0.00 0.00 0.00 3.91
2483 2542 3.533547 CTCTCCTTCTTGATCCAGCAAG 58.466 50.000 0.00 0.00 45.10 4.01
2484 2543 2.015587 CTCCTTCTTGATCCAGCAAGC 58.984 52.381 0.00 0.00 43.78 4.01
2485 2544 0.731417 CCTTCTTGATCCAGCAAGCG 59.269 55.000 0.00 0.00 43.78 4.68
2486 2545 1.676916 CCTTCTTGATCCAGCAAGCGA 60.677 52.381 0.00 0.00 43.78 4.93
2487 2546 1.664659 CTTCTTGATCCAGCAAGCGAG 59.335 52.381 0.00 0.00 43.78 5.03
2488 2547 0.107993 TCTTGATCCAGCAAGCGAGG 60.108 55.000 0.00 0.94 43.78 4.63
2489 2548 1.078214 TTGATCCAGCAAGCGAGGG 60.078 57.895 6.72 1.35 0.00 4.30
2490 2549 1.552799 TTGATCCAGCAAGCGAGGGA 61.553 55.000 6.72 6.26 0.00 4.20
2491 2550 1.227497 GATCCAGCAAGCGAGGGAG 60.227 63.158 8.60 0.00 31.96 4.30
2492 2551 1.680522 GATCCAGCAAGCGAGGGAGA 61.681 60.000 8.60 0.00 31.96 3.71
2493 2552 1.684386 ATCCAGCAAGCGAGGGAGAG 61.684 60.000 8.60 0.00 31.96 3.20
2494 2553 2.186384 CAGCAAGCGAGGGAGAGG 59.814 66.667 0.00 0.00 0.00 3.69
2495 2554 2.284258 AGCAAGCGAGGGAGAGGT 60.284 61.111 0.00 0.00 0.00 3.85
2496 2555 2.125350 GCAAGCGAGGGAGAGGTG 60.125 66.667 0.00 0.00 0.00 4.00
2497 2556 2.581354 CAAGCGAGGGAGAGGTGG 59.419 66.667 0.00 0.00 0.00 4.61
2498 2557 2.120718 AAGCGAGGGAGAGGTGGT 59.879 61.111 0.00 0.00 0.00 4.16
2499 2558 0.970937 CAAGCGAGGGAGAGGTGGTA 60.971 60.000 0.00 0.00 0.00 3.25
2500 2559 0.684805 AAGCGAGGGAGAGGTGGTAG 60.685 60.000 0.00 0.00 0.00 3.18
2501 2560 1.076923 GCGAGGGAGAGGTGGTAGA 60.077 63.158 0.00 0.00 0.00 2.59
2502 2561 0.468400 GCGAGGGAGAGGTGGTAGAT 60.468 60.000 0.00 0.00 0.00 1.98
2503 2562 1.323412 CGAGGGAGAGGTGGTAGATG 58.677 60.000 0.00 0.00 0.00 2.90
2504 2563 1.133761 CGAGGGAGAGGTGGTAGATGA 60.134 57.143 0.00 0.00 0.00 2.92
2505 2564 2.593026 GAGGGAGAGGTGGTAGATGAG 58.407 57.143 0.00 0.00 0.00 2.90
2506 2565 2.175931 GAGGGAGAGGTGGTAGATGAGA 59.824 54.545 0.00 0.00 0.00 3.27
2507 2566 2.794760 AGGGAGAGGTGGTAGATGAGAT 59.205 50.000 0.00 0.00 0.00 2.75
2508 2567 3.161866 GGGAGAGGTGGTAGATGAGATC 58.838 54.545 0.00 0.00 0.00 2.75
2509 2568 3.181423 GGGAGAGGTGGTAGATGAGATCT 60.181 52.174 0.00 0.00 43.33 2.75
2510 2569 3.826157 GGAGAGGTGGTAGATGAGATCTG 59.174 52.174 0.00 0.00 40.51 2.90
2511 2570 4.447034 GGAGAGGTGGTAGATGAGATCTGA 60.447 50.000 0.00 0.00 40.51 3.27
2512 2571 5.136068 AGAGGTGGTAGATGAGATCTGAA 57.864 43.478 0.00 0.00 40.51 3.02
2513 2572 4.892934 AGAGGTGGTAGATGAGATCTGAAC 59.107 45.833 0.00 0.00 40.51 3.18
2514 2573 3.964031 AGGTGGTAGATGAGATCTGAACC 59.036 47.826 0.00 0.00 40.51 3.62
2515 2574 3.706594 GGTGGTAGATGAGATCTGAACCA 59.293 47.826 0.00 0.00 42.72 3.67
2516 2575 4.162320 GGTGGTAGATGAGATCTGAACCAA 59.838 45.833 5.87 0.00 45.04 3.67
2517 2576 5.112686 GTGGTAGATGAGATCTGAACCAAC 58.887 45.833 5.87 0.00 45.04 3.77
2518 2577 4.777366 TGGTAGATGAGATCTGAACCAACA 59.223 41.667 0.00 0.00 42.26 3.33
2519 2578 5.112686 GGTAGATGAGATCTGAACCAACAC 58.887 45.833 0.00 0.00 40.51 3.32
2520 2579 3.854666 AGATGAGATCTGAACCAACACG 58.145 45.455 0.00 0.00 38.44 4.49
2521 2580 3.511540 AGATGAGATCTGAACCAACACGA 59.488 43.478 0.00 0.00 38.44 4.35
2522 2581 3.026630 TGAGATCTGAACCAACACGAC 57.973 47.619 0.00 0.00 0.00 4.34
2523 2582 1.986378 GAGATCTGAACCAACACGACG 59.014 52.381 0.00 0.00 0.00 5.12
2524 2583 1.611977 AGATCTGAACCAACACGACGA 59.388 47.619 0.00 0.00 0.00 4.20
2525 2584 1.719780 GATCTGAACCAACACGACGAC 59.280 52.381 0.00 0.00 0.00 4.34
2526 2585 0.593008 TCTGAACCAACACGACGACG 60.593 55.000 5.58 5.58 45.75 5.12
2536 2595 4.274700 CGACGACGTGGTGGTGGT 62.275 66.667 8.32 0.00 34.56 4.16
2537 2596 2.660552 GACGACGTGGTGGTGGTG 60.661 66.667 8.32 0.00 0.00 4.17
2538 2597 4.230002 ACGACGTGGTGGTGGTGG 62.230 66.667 1.11 0.00 0.00 4.61
2540 2599 4.555709 GACGTGGTGGTGGTGGCA 62.556 66.667 0.00 0.00 0.00 4.92
2541 2600 4.562425 ACGTGGTGGTGGTGGCAG 62.562 66.667 0.00 0.00 0.00 4.85
2542 2601 4.562425 CGTGGTGGTGGTGGCAGT 62.562 66.667 0.00 0.00 0.00 4.40
2543 2602 2.906897 GTGGTGGTGGTGGCAGTG 60.907 66.667 0.00 0.00 0.00 3.66
2544 2603 4.202574 TGGTGGTGGTGGCAGTGG 62.203 66.667 0.00 0.00 0.00 4.00
2545 2604 3.884774 GGTGGTGGTGGCAGTGGA 61.885 66.667 0.00 0.00 0.00 4.02
2546 2605 2.194597 GTGGTGGTGGCAGTGGAA 59.805 61.111 0.00 0.00 0.00 3.53
2547 2606 1.228552 GTGGTGGTGGCAGTGGAAT 60.229 57.895 0.00 0.00 0.00 3.01
2548 2607 0.827507 GTGGTGGTGGCAGTGGAATT 60.828 55.000 0.00 0.00 0.00 2.17
2549 2608 0.539438 TGGTGGTGGCAGTGGAATTC 60.539 55.000 0.00 0.00 0.00 2.17
2550 2609 1.250840 GGTGGTGGCAGTGGAATTCC 61.251 60.000 18.17 18.17 0.00 3.01
2551 2610 1.303236 TGGTGGCAGTGGAATTCCG 60.303 57.895 19.57 6.74 39.43 4.30
2552 2611 2.046285 GGTGGCAGTGGAATTCCGG 61.046 63.158 19.57 12.38 39.43 5.14
2553 2612 2.361104 TGGCAGTGGAATTCCGGC 60.361 61.111 19.57 20.45 39.43 6.13
2554 2613 2.361104 GGCAGTGGAATTCCGGCA 60.361 61.111 26.81 8.15 39.43 5.69
2555 2614 2.409870 GGCAGTGGAATTCCGGCAG 61.410 63.158 26.81 17.55 39.43 4.85
2556 2615 2.409870 GCAGTGGAATTCCGGCAGG 61.410 63.158 23.14 14.53 39.43 4.85
2557 2616 1.750399 CAGTGGAATTCCGGCAGGG 60.750 63.158 19.57 2.39 39.43 4.45
2558 2617 3.140814 GTGGAATTCCGGCAGGGC 61.141 66.667 19.57 0.50 39.43 5.19
2559 2618 3.338250 TGGAATTCCGGCAGGGCT 61.338 61.111 19.57 0.00 39.43 5.19
2560 2619 2.043953 GGAATTCCGGCAGGGCTT 60.044 61.111 9.17 0.00 38.33 4.35
2561 2620 2.121538 GGAATTCCGGCAGGGCTTC 61.122 63.158 9.17 6.44 38.33 3.86
2562 2621 2.438434 AATTCCGGCAGGGCTTCG 60.438 61.111 2.05 0.00 38.33 3.79
2584 2643 4.996113 GCGCATACCGGTGAAATG 57.004 55.556 19.93 14.65 37.44 2.32
2585 2644 2.094904 GCGCATACCGGTGAAATGT 58.905 52.632 19.93 0.00 37.44 2.71
2586 2645 0.248054 GCGCATACCGGTGAAATGTG 60.248 55.000 19.93 20.18 37.44 3.21
2587 2646 0.376852 CGCATACCGGTGAAATGTGG 59.623 55.000 19.93 6.04 0.00 4.17
2588 2647 0.738389 GCATACCGGTGAAATGTGGG 59.262 55.000 19.93 0.00 0.00 4.61
2589 2648 1.680555 GCATACCGGTGAAATGTGGGA 60.681 52.381 19.93 0.00 0.00 4.37
2590 2649 2.288666 CATACCGGTGAAATGTGGGAG 58.711 52.381 19.93 0.00 0.00 4.30
2591 2650 0.616371 TACCGGTGAAATGTGGGAGG 59.384 55.000 19.93 0.00 0.00 4.30
2592 2651 1.378762 CCGGTGAAATGTGGGAGGT 59.621 57.895 0.00 0.00 0.00 3.85
2593 2652 0.960364 CCGGTGAAATGTGGGAGGTG 60.960 60.000 0.00 0.00 0.00 4.00
2594 2653 0.250727 CGGTGAAATGTGGGAGGTGT 60.251 55.000 0.00 0.00 0.00 4.16
2595 2654 1.817740 CGGTGAAATGTGGGAGGTGTT 60.818 52.381 0.00 0.00 0.00 3.32
2596 2655 1.613437 GGTGAAATGTGGGAGGTGTTG 59.387 52.381 0.00 0.00 0.00 3.33
2597 2656 1.613437 GTGAAATGTGGGAGGTGTTGG 59.387 52.381 0.00 0.00 0.00 3.77
2598 2657 1.256812 GAAATGTGGGAGGTGTTGGG 58.743 55.000 0.00 0.00 0.00 4.12
2599 2658 0.856982 AAATGTGGGAGGTGTTGGGA 59.143 50.000 0.00 0.00 0.00 4.37
2600 2659 0.405585 AATGTGGGAGGTGTTGGGAG 59.594 55.000 0.00 0.00 0.00 4.30
2601 2660 0.475632 ATGTGGGAGGTGTTGGGAGA 60.476 55.000 0.00 0.00 0.00 3.71
2602 2661 1.127567 TGTGGGAGGTGTTGGGAGAG 61.128 60.000 0.00 0.00 0.00 3.20
2603 2662 1.538876 TGGGAGGTGTTGGGAGAGG 60.539 63.158 0.00 0.00 0.00 3.69
2604 2663 1.539124 GGGAGGTGTTGGGAGAGGT 60.539 63.158 0.00 0.00 0.00 3.85
2605 2664 0.252558 GGGAGGTGTTGGGAGAGGTA 60.253 60.000 0.00 0.00 0.00 3.08
2606 2665 1.652947 GGAGGTGTTGGGAGAGGTAA 58.347 55.000 0.00 0.00 0.00 2.85
2607 2666 2.197465 GGAGGTGTTGGGAGAGGTAAT 58.803 52.381 0.00 0.00 0.00 1.89
2608 2667 2.092914 GGAGGTGTTGGGAGAGGTAATG 60.093 54.545 0.00 0.00 0.00 1.90
2609 2668 1.916181 AGGTGTTGGGAGAGGTAATGG 59.084 52.381 0.00 0.00 0.00 3.16
2610 2669 1.064685 GGTGTTGGGAGAGGTAATGGG 60.065 57.143 0.00 0.00 0.00 4.00
2611 2670 0.623723 TGTTGGGAGAGGTAATGGGC 59.376 55.000 0.00 0.00 0.00 5.36
2612 2671 0.623723 GTTGGGAGAGGTAATGGGCA 59.376 55.000 0.00 0.00 0.00 5.36
2613 2672 1.005450 GTTGGGAGAGGTAATGGGCAA 59.995 52.381 0.00 0.00 0.00 4.52
2614 2673 0.918983 TGGGAGAGGTAATGGGCAAG 59.081 55.000 0.00 0.00 0.00 4.01
2615 2674 0.183731 GGGAGAGGTAATGGGCAAGG 59.816 60.000 0.00 0.00 0.00 3.61
2616 2675 0.183731 GGAGAGGTAATGGGCAAGGG 59.816 60.000 0.00 0.00 0.00 3.95
2617 2676 0.919710 GAGAGGTAATGGGCAAGGGT 59.080 55.000 0.00 0.00 0.00 4.34
2618 2677 0.919710 AGAGGTAATGGGCAAGGGTC 59.080 55.000 0.00 0.00 0.00 4.46
2619 2678 0.463833 GAGGTAATGGGCAAGGGTCG 60.464 60.000 0.00 0.00 0.00 4.79
2620 2679 0.912487 AGGTAATGGGCAAGGGTCGA 60.912 55.000 0.00 0.00 0.00 4.20
2621 2680 0.034863 GGTAATGGGCAAGGGTCGAA 60.035 55.000 0.00 0.00 0.00 3.71
2622 2681 1.379527 GTAATGGGCAAGGGTCGAAG 58.620 55.000 0.00 0.00 0.00 3.79
2623 2682 0.254747 TAATGGGCAAGGGTCGAAGG 59.745 55.000 0.00 0.00 0.00 3.46
2624 2683 1.789576 AATGGGCAAGGGTCGAAGGT 61.790 55.000 0.00 0.00 0.00 3.50
2625 2684 1.789576 ATGGGCAAGGGTCGAAGGTT 61.790 55.000 0.00 0.00 0.00 3.50
2626 2685 1.971695 GGGCAAGGGTCGAAGGTTG 60.972 63.158 0.00 0.00 0.00 3.77
2627 2686 1.971695 GGCAAGGGTCGAAGGTTGG 60.972 63.158 0.00 0.00 0.00 3.77
2628 2687 1.228154 GCAAGGGTCGAAGGTTGGT 60.228 57.895 0.00 0.00 0.00 3.67
2629 2688 0.822121 GCAAGGGTCGAAGGTTGGTT 60.822 55.000 0.00 0.00 0.00 3.67
2630 2689 0.951558 CAAGGGTCGAAGGTTGGTTG 59.048 55.000 0.00 0.00 0.00 3.77
2631 2690 0.822121 AAGGGTCGAAGGTTGGTTGC 60.822 55.000 0.00 0.00 0.00 4.17
2632 2691 2.265904 GGGTCGAAGGTTGGTTGCC 61.266 63.158 0.00 0.00 0.00 4.52
2633 2692 2.265904 GGTCGAAGGTTGGTTGCCC 61.266 63.158 0.00 0.00 0.00 5.36
2634 2693 2.114411 TCGAAGGTTGGTTGCCCC 59.886 61.111 0.00 0.00 0.00 5.80
2635 2694 2.989253 CGAAGGTTGGTTGCCCCC 60.989 66.667 0.00 0.00 0.00 5.40
2636 2695 2.200092 GAAGGTTGGTTGCCCCCA 59.800 61.111 0.00 0.00 0.00 4.96
2637 2696 1.458588 GAAGGTTGGTTGCCCCCAA 60.459 57.895 0.27 0.27 42.16 4.12
2651 2710 3.966543 CCAACGCCTCCCCACCTT 61.967 66.667 0.00 0.00 0.00 3.50
2652 2711 2.115266 CAACGCCTCCCCACCTTT 59.885 61.111 0.00 0.00 0.00 3.11
2653 2712 1.377229 CAACGCCTCCCCACCTTTA 59.623 57.895 0.00 0.00 0.00 1.85
2654 2713 0.034477 CAACGCCTCCCCACCTTTAT 60.034 55.000 0.00 0.00 0.00 1.40
2655 2714 1.210967 CAACGCCTCCCCACCTTTATA 59.789 52.381 0.00 0.00 0.00 0.98
2656 2715 1.815757 ACGCCTCCCCACCTTTATAT 58.184 50.000 0.00 0.00 0.00 0.86
2657 2716 2.980548 ACGCCTCCCCACCTTTATATA 58.019 47.619 0.00 0.00 0.00 0.86
2658 2717 2.904434 ACGCCTCCCCACCTTTATATAG 59.096 50.000 0.00 0.00 0.00 1.31
2659 2718 3.170717 CGCCTCCCCACCTTTATATAGA 58.829 50.000 0.00 0.00 0.00 1.98
2660 2719 3.775316 CGCCTCCCCACCTTTATATAGAT 59.225 47.826 0.00 0.00 0.00 1.98
2661 2720 4.383118 CGCCTCCCCACCTTTATATAGATG 60.383 50.000 0.00 0.00 0.00 2.90
2662 2721 4.536489 GCCTCCCCACCTTTATATAGATGT 59.464 45.833 0.00 0.00 0.00 3.06
2663 2722 5.571658 GCCTCCCCACCTTTATATAGATGTG 60.572 48.000 2.77 2.77 0.00 3.21
2664 2723 5.045578 CCTCCCCACCTTTATATAGATGTGG 60.046 48.000 16.37 16.37 42.23 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 0.179086 AGCAAGGCAAAACCGTTTGG 60.179 50.000 0.00 0.00 46.52 3.28
33 34 4.803098 AACTATCCGACTTTGTACAGCT 57.197 40.909 0.00 0.00 0.00 4.24
57 58 7.281324 TGACCGTCTTCTTTTTGACAATAAGAA 59.719 33.333 23.70 23.70 36.68 2.52
73 76 2.555199 CTCCAATCCATGACCGTCTTC 58.445 52.381 0.00 0.00 0.00 2.87
119 139 1.657822 GAATTCCCTTGTCTCGAGGC 58.342 55.000 10.89 10.89 33.78 4.70
306 327 9.667107 GTGGCTTAGGCAATTTGATATACTATA 57.333 33.333 10.78 0.00 40.46 1.31
307 328 7.334421 CGTGGCTTAGGCAATTTGATATACTAT 59.666 37.037 10.78 0.00 40.46 2.12
308 329 6.649141 CGTGGCTTAGGCAATTTGATATACTA 59.351 38.462 10.78 0.00 40.46 1.82
309 330 5.470098 CGTGGCTTAGGCAATTTGATATACT 59.530 40.000 10.78 0.00 40.46 2.12
310 331 5.238650 ACGTGGCTTAGGCAATTTGATATAC 59.761 40.000 10.78 0.00 40.46 1.47
311 332 5.373222 ACGTGGCTTAGGCAATTTGATATA 58.627 37.500 10.78 0.00 40.46 0.86
312 333 4.207165 ACGTGGCTTAGGCAATTTGATAT 58.793 39.130 10.78 0.00 40.46 1.63
315 336 1.810151 GACGTGGCTTAGGCAATTTGA 59.190 47.619 10.78 0.00 40.46 2.69
316 337 1.135402 GGACGTGGCTTAGGCAATTTG 60.135 52.381 10.78 3.65 40.46 2.32
317 338 1.173913 GGACGTGGCTTAGGCAATTT 58.826 50.000 10.78 0.00 40.46 1.82
318 339 0.328258 AGGACGTGGCTTAGGCAATT 59.672 50.000 10.78 0.00 40.46 2.32
319 340 0.392998 CAGGACGTGGCTTAGGCAAT 60.393 55.000 10.78 1.25 40.46 3.56
372 393 5.852755 TGTAAGTAACGTGTACGACATTGAG 59.147 40.000 11.79 0.00 43.02 3.02
425 446 1.153706 CGGCCGGATTTACTCGTGT 60.154 57.895 20.10 0.00 0.00 4.49
555 576 0.396435 ACACGAGGGCATCAAAGTCA 59.604 50.000 0.00 0.00 0.00 3.41
629 650 6.586844 GGGTAGCTTAATTAATCTAGACAGCG 59.413 42.308 8.66 0.00 0.00 5.18
655 684 6.443995 AGTAGCTGGAAAGTAAAGGGTAAA 57.556 37.500 0.00 0.00 0.00 2.01
671 700 1.680735 CTGCCTCTGACCTAGTAGCTG 59.319 57.143 0.00 0.00 0.00 4.24
672 701 1.410932 CCTGCCTCTGACCTAGTAGCT 60.411 57.143 0.00 0.00 0.00 3.32
673 702 1.036707 CCTGCCTCTGACCTAGTAGC 58.963 60.000 0.00 0.00 0.00 3.58
674 703 1.698506 CCCTGCCTCTGACCTAGTAG 58.301 60.000 0.00 0.00 0.00 2.57
675 704 0.397254 GCCCTGCCTCTGACCTAGTA 60.397 60.000 0.00 0.00 0.00 1.82
676 705 1.687493 GCCCTGCCTCTGACCTAGT 60.687 63.158 0.00 0.00 0.00 2.57
701 741 0.741221 CGCTGTTGGCTAGGTTCTCC 60.741 60.000 0.00 0.00 39.13 3.71
707 747 1.084370 GTACAGCGCTGTTGGCTAGG 61.084 60.000 44.31 16.19 41.83 3.02
901 946 4.823276 CGGAGCTAGAGCACTTGG 57.177 61.111 4.01 0.00 45.16 3.61
918 963 6.512342 TCTCTAGTGTAGTTTCTGTTAGGC 57.488 41.667 0.00 0.00 0.00 3.93
1163 1208 7.237209 TCATCTAGCTACGTAGGAGTATGTA 57.763 40.000 23.47 0.00 30.61 2.29
1164 1209 6.111669 TCATCTAGCTACGTAGGAGTATGT 57.888 41.667 23.47 0.00 32.82 2.29
1221 1266 6.772605 AGTAATGGCATCTCATATGTTAGCA 58.227 36.000 0.00 0.00 0.00 3.49
1352 1397 0.550914 ACACCTGGTTCTGCAGGAAA 59.449 50.000 15.13 0.00 40.95 3.13
1452 1497 2.473664 CTTCGTCCTGCGTCGTCCTT 62.474 60.000 0.00 0.00 42.13 3.36
1667 1712 3.877508 ACACAAGTTGACTTTGACTAGCC 59.122 43.478 10.54 0.00 33.11 3.93
1754 1799 8.138074 AGTTCAAAATGTAAAAGAAGAGAAGCC 58.862 33.333 0.00 0.00 0.00 4.35
1755 1800 9.175060 GAGTTCAAAATGTAAAAGAAGAGAAGC 57.825 33.333 0.00 0.00 0.00 3.86
1790 1845 4.463879 CACCAGCAGGGAGAGGCG 62.464 72.222 0.00 0.00 41.15 5.52
1791 1846 2.900106 AACACCAGCAGGGAGAGGC 61.900 63.158 0.00 0.00 41.15 4.70
1815 1870 6.824305 AATTCTGGATCAAACACCTACAAG 57.176 37.500 0.00 0.00 0.00 3.16
1844 1902 6.070995 ACAATGATCACAAAAGCATGGATCTT 60.071 34.615 0.00 0.00 36.28 2.40
1900 1958 6.027749 CGTTGTTTTATCTATCAAACAGGGC 58.972 40.000 3.47 0.00 42.38 5.19
1919 1977 7.750229 ATGCTTTGGATTATATGATCGTTGT 57.250 32.000 0.00 0.00 0.00 3.32
1931 1990 7.148086 GGTGTCAGAATTGTATGCTTTGGATTA 60.148 37.037 0.00 0.00 0.00 1.75
1948 2007 0.391793 TGTGTGTTGCGGTGTCAGAA 60.392 50.000 0.00 0.00 0.00 3.02
1958 2017 1.359848 CTACCTCGGATGTGTGTTGC 58.640 55.000 0.00 0.00 0.00 4.17
1970 2029 3.792401 TGCATTGTTGTATCCTACCTCG 58.208 45.455 0.00 0.00 0.00 4.63
1975 2034 7.012327 GCTGTTCTTATGCATTGTTGTATCCTA 59.988 37.037 3.54 0.00 30.26 2.94
2004 2063 0.783206 AATGGGTTGGGGTGATGTCA 59.217 50.000 0.00 0.00 0.00 3.58
2022 2081 1.004679 GGTCGTTACGGGCTTGGAA 60.005 57.895 4.53 0.00 0.00 3.53
2073 2132 3.854666 CATCGTCTCTTCATGACACCTT 58.145 45.455 0.00 0.00 34.37 3.50
2108 2167 1.002430 TGATGTCTTGGAGTCCACAGC 59.998 52.381 12.69 10.49 30.78 4.40
2128 2187 6.605594 TCCAGTGTTGTTTCTTTTATGAAGGT 59.394 34.615 0.00 0.00 0.00 3.50
2141 2200 1.102978 GTGGTGCTCCAGTGTTGTTT 58.897 50.000 7.99 0.00 45.24 2.83
2193 2252 2.904866 TGTTGCGGTGTTCAGGGC 60.905 61.111 0.00 0.00 0.00 5.19
2197 2256 2.412870 CTATGAGTGTTGCGGTGTTCA 58.587 47.619 0.00 0.00 0.00 3.18
2200 2259 0.036388 CCCTATGAGTGTTGCGGTGT 60.036 55.000 0.00 0.00 0.00 4.16
2203 2262 1.138859 TGATCCCTATGAGTGTTGCGG 59.861 52.381 0.00 0.00 0.00 5.69
2204 2263 2.602257 TGATCCCTATGAGTGTTGCG 57.398 50.000 0.00 0.00 0.00 4.85
2205 2264 5.468072 CAGTAATGATCCCTATGAGTGTTGC 59.532 44.000 0.00 0.00 0.00 4.17
2206 2265 6.820335 TCAGTAATGATCCCTATGAGTGTTG 58.180 40.000 0.00 0.00 0.00 3.33
2207 2266 7.448420 CATCAGTAATGATCCCTATGAGTGTT 58.552 38.462 1.94 0.00 37.59 3.32
2208 2267 6.013898 CCATCAGTAATGATCCCTATGAGTGT 60.014 42.308 1.94 0.00 37.59 3.55
2209 2268 6.404708 CCATCAGTAATGATCCCTATGAGTG 58.595 44.000 1.94 0.00 37.59 3.51
2210 2269 5.486775 CCCATCAGTAATGATCCCTATGAGT 59.513 44.000 1.94 0.00 37.59 3.41
2211 2270 5.104610 CCCCATCAGTAATGATCCCTATGAG 60.105 48.000 1.94 0.00 37.59 2.90
2212 2271 4.784838 CCCCATCAGTAATGATCCCTATGA 59.215 45.833 1.94 0.00 37.59 2.15
2213 2272 4.784838 TCCCCATCAGTAATGATCCCTATG 59.215 45.833 1.94 0.00 37.59 2.23
2214 2273 5.041695 TCCCCATCAGTAATGATCCCTAT 57.958 43.478 1.94 0.00 37.59 2.57
2215 2274 4.502036 TCCCCATCAGTAATGATCCCTA 57.498 45.455 1.94 0.00 37.59 3.53
2216 2275 3.367280 TCCCCATCAGTAATGATCCCT 57.633 47.619 1.94 0.00 37.59 4.20
2217 2276 3.756117 GTTCCCCATCAGTAATGATCCC 58.244 50.000 1.94 0.00 37.59 3.85
2218 2277 3.071023 TCGTTCCCCATCAGTAATGATCC 59.929 47.826 1.94 0.00 37.59 3.36
2219 2278 4.336889 TCGTTCCCCATCAGTAATGATC 57.663 45.455 1.94 0.00 37.59 2.92
2220 2279 4.708177 CTTCGTTCCCCATCAGTAATGAT 58.292 43.478 0.00 0.00 37.59 2.45
2221 2280 3.681594 GCTTCGTTCCCCATCAGTAATGA 60.682 47.826 0.00 0.00 37.59 2.57
2222 2281 2.614057 GCTTCGTTCCCCATCAGTAATG 59.386 50.000 0.00 0.00 34.93 1.90
2223 2282 2.238646 TGCTTCGTTCCCCATCAGTAAT 59.761 45.455 0.00 0.00 0.00 1.89
2224 2283 1.626321 TGCTTCGTTCCCCATCAGTAA 59.374 47.619 0.00 0.00 0.00 2.24
2225 2284 1.271856 TGCTTCGTTCCCCATCAGTA 58.728 50.000 0.00 0.00 0.00 2.74
2226 2285 0.620556 ATGCTTCGTTCCCCATCAGT 59.379 50.000 0.00 0.00 0.00 3.41
2227 2286 1.019673 CATGCTTCGTTCCCCATCAG 58.980 55.000 0.00 0.00 0.00 2.90
2228 2287 0.617935 TCATGCTTCGTTCCCCATCA 59.382 50.000 0.00 0.00 0.00 3.07
2229 2288 1.750193 TTCATGCTTCGTTCCCCATC 58.250 50.000 0.00 0.00 0.00 3.51
2230 2289 2.214376 TTTCATGCTTCGTTCCCCAT 57.786 45.000 0.00 0.00 0.00 4.00
2231 2290 1.988293 TTTTCATGCTTCGTTCCCCA 58.012 45.000 0.00 0.00 0.00 4.96
2232 2291 4.712122 TTATTTTCATGCTTCGTTCCCC 57.288 40.909 0.00 0.00 0.00 4.81
2254 2313 6.800072 TCTTGGGTGTTTTGTAGGATTTTT 57.200 33.333 0.00 0.00 0.00 1.94
2255 2314 6.014584 GGATCTTGGGTGTTTTGTAGGATTTT 60.015 38.462 0.00 0.00 0.00 1.82
2256 2315 5.480422 GGATCTTGGGTGTTTTGTAGGATTT 59.520 40.000 0.00 0.00 0.00 2.17
2257 2316 5.016831 GGATCTTGGGTGTTTTGTAGGATT 58.983 41.667 0.00 0.00 0.00 3.01
2258 2317 4.044065 TGGATCTTGGGTGTTTTGTAGGAT 59.956 41.667 0.00 0.00 0.00 3.24
2259 2318 3.396276 TGGATCTTGGGTGTTTTGTAGGA 59.604 43.478 0.00 0.00 0.00 2.94
2260 2319 3.761897 TGGATCTTGGGTGTTTTGTAGG 58.238 45.455 0.00 0.00 0.00 3.18
2261 2320 5.711976 AGATTGGATCTTGGGTGTTTTGTAG 59.288 40.000 0.00 0.00 35.76 2.74
2262 2321 5.640147 AGATTGGATCTTGGGTGTTTTGTA 58.360 37.500 0.00 0.00 35.76 2.41
2263 2322 4.482990 AGATTGGATCTTGGGTGTTTTGT 58.517 39.130 0.00 0.00 35.76 2.83
2264 2323 5.126061 CCTAGATTGGATCTTGGGTGTTTTG 59.874 44.000 9.62 0.00 44.99 2.44
2265 2324 5.264395 CCTAGATTGGATCTTGGGTGTTTT 58.736 41.667 9.62 0.00 44.99 2.43
2266 2325 4.860022 CCTAGATTGGATCTTGGGTGTTT 58.140 43.478 9.62 0.00 44.99 2.83
2267 2326 4.510167 CCTAGATTGGATCTTGGGTGTT 57.490 45.455 9.62 0.00 44.99 3.32
2273 2332 5.224821 TGCATCTCCTAGATTGGATCTTG 57.775 43.478 0.00 0.00 40.76 3.02
2274 2333 6.352051 GCTATGCATCTCCTAGATTGGATCTT 60.352 42.308 0.19 0.00 40.76 2.40
2275 2334 5.129155 GCTATGCATCTCCTAGATTGGATCT 59.871 44.000 0.19 0.00 43.33 2.75
2276 2335 5.129155 AGCTATGCATCTCCTAGATTGGATC 59.871 44.000 0.19 0.00 31.32 3.36
2277 2336 5.031495 AGCTATGCATCTCCTAGATTGGAT 58.969 41.667 0.19 0.00 31.32 3.41
2278 2337 4.423913 AGCTATGCATCTCCTAGATTGGA 58.576 43.478 0.19 0.00 31.32 3.53
2279 2338 4.822685 AGCTATGCATCTCCTAGATTGG 57.177 45.455 0.19 0.00 31.32 3.16
2280 2339 5.339177 CGTAGCTATGCATCTCCTAGATTG 58.661 45.833 0.19 0.00 31.32 2.67
2281 2340 4.400884 CCGTAGCTATGCATCTCCTAGATT 59.599 45.833 0.19 0.00 31.32 2.40
2282 2341 3.951037 CCGTAGCTATGCATCTCCTAGAT 59.049 47.826 0.19 0.00 34.74 1.98
2283 2342 3.348119 CCGTAGCTATGCATCTCCTAGA 58.652 50.000 0.19 0.00 0.00 2.43
2284 2343 2.425312 CCCGTAGCTATGCATCTCCTAG 59.575 54.545 0.19 0.00 0.00 3.02
2285 2344 2.041216 TCCCGTAGCTATGCATCTCCTA 59.959 50.000 0.19 0.00 0.00 2.94
2286 2345 1.203063 TCCCGTAGCTATGCATCTCCT 60.203 52.381 0.19 0.26 0.00 3.69
2287 2346 1.203523 CTCCCGTAGCTATGCATCTCC 59.796 57.143 0.19 0.00 0.00 3.71
2288 2347 2.163509 TCTCCCGTAGCTATGCATCTC 58.836 52.381 0.19 0.00 0.00 2.75
2289 2348 2.294449 TCTCCCGTAGCTATGCATCT 57.706 50.000 0.19 0.00 0.00 2.90
2290 2349 3.386768 TTTCTCCCGTAGCTATGCATC 57.613 47.619 0.19 0.00 0.00 3.91
2291 2350 3.134804 ACTTTTCTCCCGTAGCTATGCAT 59.865 43.478 3.79 3.79 0.00 3.96
2292 2351 2.500098 ACTTTTCTCCCGTAGCTATGCA 59.500 45.455 7.49 0.00 0.00 3.96
2293 2352 2.866762 CACTTTTCTCCCGTAGCTATGC 59.133 50.000 7.49 0.00 0.00 3.14
2294 2353 3.865745 CACACTTTTCTCCCGTAGCTATG 59.134 47.826 5.93 5.93 0.00 2.23
2295 2354 3.514309 ACACACTTTTCTCCCGTAGCTAT 59.486 43.478 0.00 0.00 0.00 2.97
2296 2355 2.895404 ACACACTTTTCTCCCGTAGCTA 59.105 45.455 0.00 0.00 0.00 3.32
2297 2356 1.692519 ACACACTTTTCTCCCGTAGCT 59.307 47.619 0.00 0.00 0.00 3.32
2298 2357 2.165319 ACACACTTTTCTCCCGTAGC 57.835 50.000 0.00 0.00 0.00 3.58
2299 2358 3.493503 GTGAACACACTTTTCTCCCGTAG 59.506 47.826 0.00 0.00 0.00 3.51
2300 2359 3.118702 TGTGAACACACTTTTCTCCCGTA 60.119 43.478 3.39 0.00 36.21 4.02
2301 2360 2.285977 GTGAACACACTTTTCTCCCGT 58.714 47.619 0.00 0.00 0.00 5.28
2302 2361 2.285083 TGTGAACACACTTTTCTCCCG 58.715 47.619 3.39 0.00 36.21 5.14
2303 2362 4.215613 GGTATGTGAACACACTTTTCTCCC 59.784 45.833 9.83 0.00 45.05 4.30
2304 2363 4.215613 GGGTATGTGAACACACTTTTCTCC 59.784 45.833 9.83 5.43 45.05 3.71
2305 2364 5.063880 AGGGTATGTGAACACACTTTTCTC 58.936 41.667 9.83 0.45 45.05 2.87
2306 2365 5.048846 AGGGTATGTGAACACACTTTTCT 57.951 39.130 9.83 2.67 45.05 2.52
2307 2366 5.767816 AAGGGTATGTGAACACACTTTTC 57.232 39.130 9.83 0.60 45.05 2.29
2308 2367 6.538945 AAAAGGGTATGTGAACACACTTTT 57.461 33.333 18.92 18.92 45.05 2.27
2309 2368 7.012989 GTCTAAAAGGGTATGTGAACACACTTT 59.987 37.037 9.83 11.33 45.05 2.66
2310 2369 6.485648 GTCTAAAAGGGTATGTGAACACACTT 59.514 38.462 9.83 6.30 45.05 3.16
2311 2370 5.995897 GTCTAAAAGGGTATGTGAACACACT 59.004 40.000 9.83 0.37 45.05 3.55
2312 2371 5.180680 GGTCTAAAAGGGTATGTGAACACAC 59.819 44.000 9.83 0.00 45.05 3.82
2313 2372 5.310451 GGTCTAAAAGGGTATGTGAACACA 58.690 41.667 10.04 10.04 46.44 3.72
2314 2373 4.390909 CGGTCTAAAAGGGTATGTGAACAC 59.609 45.833 0.00 0.00 0.00 3.32
2315 2374 4.283978 TCGGTCTAAAAGGGTATGTGAACA 59.716 41.667 0.00 0.00 0.00 3.18
2316 2375 4.824289 TCGGTCTAAAAGGGTATGTGAAC 58.176 43.478 0.00 0.00 0.00 3.18
2317 2376 5.486735 TTCGGTCTAAAAGGGTATGTGAA 57.513 39.130 0.00 0.00 0.00 3.18
2318 2377 5.484715 CTTTCGGTCTAAAAGGGTATGTGA 58.515 41.667 0.00 0.00 31.48 3.58
2319 2378 4.094442 GCTTTCGGTCTAAAAGGGTATGTG 59.906 45.833 0.00 0.00 34.88 3.21
2320 2379 4.259356 GCTTTCGGTCTAAAAGGGTATGT 58.741 43.478 0.00 0.00 34.88 2.29
2321 2380 3.308866 CGCTTTCGGTCTAAAAGGGTATG 59.691 47.826 4.94 0.00 40.10 2.39
2322 2381 3.528532 CGCTTTCGGTCTAAAAGGGTAT 58.471 45.455 4.94 0.00 40.10 2.73
2323 2382 2.963432 CGCTTTCGGTCTAAAAGGGTA 58.037 47.619 4.94 0.00 40.10 3.69
2324 2383 1.804601 CGCTTTCGGTCTAAAAGGGT 58.195 50.000 4.94 0.00 40.10 4.34
2325 2384 1.804601 ACGCTTTCGGTCTAAAAGGG 58.195 50.000 10.08 10.08 46.38 3.95
2326 2385 3.181523 GCTAACGCTTTCGGTCTAAAAGG 60.182 47.826 0.00 0.00 40.69 3.11
2327 2386 3.481467 CGCTAACGCTTTCGGTCTAAAAG 60.481 47.826 0.00 0.00 40.69 2.27
2328 2387 2.409378 CGCTAACGCTTTCGGTCTAAAA 59.591 45.455 0.00 0.00 40.69 1.52
2329 2388 1.987770 CGCTAACGCTTTCGGTCTAAA 59.012 47.619 0.00 0.00 40.69 1.85
2330 2389 1.068333 ACGCTAACGCTTTCGGTCTAA 60.068 47.619 0.00 0.00 45.53 2.10
2331 2390 0.523072 ACGCTAACGCTTTCGGTCTA 59.477 50.000 0.00 0.00 45.53 2.59
2332 2391 0.731855 GACGCTAACGCTTTCGGTCT 60.732 55.000 0.00 0.00 45.53 3.85
2333 2392 1.700595 GACGCTAACGCTTTCGGTC 59.299 57.895 0.00 0.00 45.53 4.79
2334 2393 2.084681 CGACGCTAACGCTTTCGGT 61.085 57.895 0.00 0.00 45.53 4.69
2335 2394 0.794229 TACGACGCTAACGCTTTCGG 60.794 55.000 0.00 0.00 45.53 4.30
2336 2395 0.976963 TTACGACGCTAACGCTTTCG 59.023 50.000 0.00 0.00 45.53 3.46
2337 2396 1.265590 CGTTACGACGCTAACGCTTTC 60.266 52.381 20.96 0.00 41.72 2.62
2338 2397 0.704551 CGTTACGACGCTAACGCTTT 59.295 50.000 20.96 0.00 41.72 3.51
2339 2398 2.342956 CGTTACGACGCTAACGCTT 58.657 52.632 20.96 0.00 41.72 4.68
2340 2399 4.047030 CGTTACGACGCTAACGCT 57.953 55.556 20.96 0.00 41.72 5.07
2349 2408 3.568538 ACTACATCAACCACGTTACGAC 58.431 45.455 13.03 0.00 0.00 4.34
2350 2409 3.667695 CGACTACATCAACCACGTTACGA 60.668 47.826 13.03 0.00 0.00 3.43
2351 2410 2.591148 CGACTACATCAACCACGTTACG 59.409 50.000 2.19 2.19 0.00 3.18
2352 2411 3.568538 ACGACTACATCAACCACGTTAC 58.431 45.455 0.00 0.00 0.00 2.50
2353 2412 3.921119 ACGACTACATCAACCACGTTA 57.079 42.857 0.00 0.00 0.00 3.18
2354 2413 2.806608 ACGACTACATCAACCACGTT 57.193 45.000 0.00 0.00 0.00 3.99
2355 2414 2.816087 AGTACGACTACATCAACCACGT 59.184 45.455 0.00 0.00 36.52 4.49
2356 2415 3.126514 AGAGTACGACTACATCAACCACG 59.873 47.826 0.00 0.00 0.00 4.94
2357 2416 4.698583 AGAGTACGACTACATCAACCAC 57.301 45.455 0.00 0.00 0.00 4.16
2358 2417 4.763279 TGAAGAGTACGACTACATCAACCA 59.237 41.667 0.00 0.00 0.00 3.67
2359 2418 5.094134 GTGAAGAGTACGACTACATCAACC 58.906 45.833 0.00 0.00 0.00 3.77
2360 2419 5.940595 AGTGAAGAGTACGACTACATCAAC 58.059 41.667 0.00 0.00 0.00 3.18
2361 2420 7.012138 GGATAGTGAAGAGTACGACTACATCAA 59.988 40.741 0.00 0.00 0.00 2.57
2362 2421 6.482641 GGATAGTGAAGAGTACGACTACATCA 59.517 42.308 0.00 0.00 0.00 3.07
2363 2422 6.482641 TGGATAGTGAAGAGTACGACTACATC 59.517 42.308 0.00 0.00 0.00 3.06
2364 2423 6.354938 TGGATAGTGAAGAGTACGACTACAT 58.645 40.000 0.00 0.00 0.00 2.29
2365 2424 5.737860 TGGATAGTGAAGAGTACGACTACA 58.262 41.667 0.00 0.00 0.00 2.74
2366 2425 6.674694 TTGGATAGTGAAGAGTACGACTAC 57.325 41.667 0.00 0.00 0.00 2.73
2367 2426 7.012138 GTGATTGGATAGTGAAGAGTACGACTA 59.988 40.741 0.00 0.00 0.00 2.59
2368 2427 5.886474 TGATTGGATAGTGAAGAGTACGACT 59.114 40.000 0.00 0.00 0.00 4.18
2369 2428 5.972382 GTGATTGGATAGTGAAGAGTACGAC 59.028 44.000 0.00 0.00 0.00 4.34
2370 2429 5.220796 CGTGATTGGATAGTGAAGAGTACGA 60.221 44.000 0.00 0.00 0.00 3.43
2371 2430 4.970611 CGTGATTGGATAGTGAAGAGTACG 59.029 45.833 0.00 0.00 0.00 3.67
2372 2431 6.132791 TCGTGATTGGATAGTGAAGAGTAC 57.867 41.667 0.00 0.00 0.00 2.73
2373 2432 6.016192 GGATCGTGATTGGATAGTGAAGAGTA 60.016 42.308 0.00 0.00 0.00 2.59
2374 2433 5.221342 GGATCGTGATTGGATAGTGAAGAGT 60.221 44.000 0.00 0.00 0.00 3.24
2375 2434 5.221322 TGGATCGTGATTGGATAGTGAAGAG 60.221 44.000 0.00 0.00 0.00 2.85
2376 2435 4.649218 TGGATCGTGATTGGATAGTGAAGA 59.351 41.667 0.00 0.00 0.00 2.87
2377 2436 4.948847 TGGATCGTGATTGGATAGTGAAG 58.051 43.478 0.00 0.00 0.00 3.02
2378 2437 5.351948 TTGGATCGTGATTGGATAGTGAA 57.648 39.130 0.00 0.00 0.00 3.18
2379 2438 5.511373 GGATTGGATCGTGATTGGATAGTGA 60.511 44.000 0.00 0.00 0.00 3.41
2380 2439 4.692625 GGATTGGATCGTGATTGGATAGTG 59.307 45.833 0.00 0.00 0.00 2.74
2381 2440 4.561530 CGGATTGGATCGTGATTGGATAGT 60.562 45.833 0.00 0.00 0.00 2.12
2382 2441 3.928992 CGGATTGGATCGTGATTGGATAG 59.071 47.826 0.00 0.00 0.00 2.08
2383 2442 3.576550 TCGGATTGGATCGTGATTGGATA 59.423 43.478 0.00 0.00 0.00 2.59
2384 2443 2.368548 TCGGATTGGATCGTGATTGGAT 59.631 45.455 0.00 0.00 0.00 3.41
2385 2444 1.760029 TCGGATTGGATCGTGATTGGA 59.240 47.619 0.00 0.00 0.00 3.53
2386 2445 2.238942 TCGGATTGGATCGTGATTGG 57.761 50.000 0.00 0.00 0.00 3.16
2387 2446 3.657634 AGATCGGATTGGATCGTGATTG 58.342 45.455 0.00 0.00 45.90 2.67
2388 2447 4.619394 GCTAGATCGGATTGGATCGTGATT 60.619 45.833 0.00 0.00 45.90 2.57
2389 2448 3.119316 GCTAGATCGGATTGGATCGTGAT 60.119 47.826 0.00 0.00 45.90 3.06
2390 2449 2.229062 GCTAGATCGGATTGGATCGTGA 59.771 50.000 0.00 0.00 45.90 4.35
2391 2450 2.600731 GCTAGATCGGATTGGATCGTG 58.399 52.381 0.00 0.00 45.90 4.35
2392 2451 1.200252 CGCTAGATCGGATTGGATCGT 59.800 52.381 0.00 0.00 45.90 3.73
2393 2452 1.200252 ACGCTAGATCGGATTGGATCG 59.800 52.381 0.00 0.00 45.90 3.69
2394 2453 2.229062 TGACGCTAGATCGGATTGGATC 59.771 50.000 0.00 0.00 42.52 3.36
2395 2454 2.239400 TGACGCTAGATCGGATTGGAT 58.761 47.619 0.00 0.00 0.00 3.41
2396 2455 1.687563 TGACGCTAGATCGGATTGGA 58.312 50.000 0.00 0.00 0.00 3.53
2397 2456 2.509052 TTGACGCTAGATCGGATTGG 57.491 50.000 0.00 0.00 0.00 3.16
2398 2457 2.216488 CGTTTGACGCTAGATCGGATTG 59.784 50.000 0.00 0.00 33.65 2.67
2399 2458 2.460918 CGTTTGACGCTAGATCGGATT 58.539 47.619 0.00 0.00 33.65 3.01
2400 2459 1.269102 CCGTTTGACGCTAGATCGGAT 60.269 52.381 0.00 0.00 40.91 4.18
2401 2460 0.099968 CCGTTTGACGCTAGATCGGA 59.900 55.000 0.00 0.00 40.91 4.55
2402 2461 0.099968 TCCGTTTGACGCTAGATCGG 59.900 55.000 0.00 0.00 40.91 4.18
2403 2462 1.189403 GTCCGTTTGACGCTAGATCG 58.811 55.000 0.00 0.00 40.91 3.69
2412 2471 2.280592 AGGTGCCGTCCGTTTGAC 60.281 61.111 0.00 0.00 40.81 3.18
2413 2472 2.029964 GAGGTGCCGTCCGTTTGA 59.970 61.111 0.00 0.00 0.00 2.69
2414 2473 3.047877 GGAGGTGCCGTCCGTTTG 61.048 66.667 0.00 0.00 0.00 2.93
2423 2482 1.299541 CATGTAATGTCGGAGGTGCC 58.700 55.000 0.00 0.00 40.20 5.01
2435 2494 5.294306 CACCATCGAGCTAAACACATGTAAT 59.706 40.000 0.00 0.00 0.00 1.89
2436 2495 4.629634 CACCATCGAGCTAAACACATGTAA 59.370 41.667 0.00 0.00 0.00 2.41
2437 2496 4.180817 CACCATCGAGCTAAACACATGTA 58.819 43.478 0.00 0.00 0.00 2.29
2438 2497 3.002791 CACCATCGAGCTAAACACATGT 58.997 45.455 0.00 0.00 0.00 3.21
2439 2498 3.002791 ACACCATCGAGCTAAACACATG 58.997 45.455 0.00 0.00 0.00 3.21
2440 2499 3.262420 GACACCATCGAGCTAAACACAT 58.738 45.455 0.00 0.00 0.00 3.21
2441 2500 2.611971 GGACACCATCGAGCTAAACACA 60.612 50.000 0.00 0.00 0.00 3.72
2442 2501 2.000447 GGACACCATCGAGCTAAACAC 59.000 52.381 0.00 0.00 0.00 3.32
2443 2502 1.899814 AGGACACCATCGAGCTAAACA 59.100 47.619 0.00 0.00 0.00 2.83
2444 2503 2.166664 AGAGGACACCATCGAGCTAAAC 59.833 50.000 0.00 0.00 0.00 2.01
2445 2504 2.427453 GAGAGGACACCATCGAGCTAAA 59.573 50.000 0.00 0.00 0.00 1.85
2446 2505 2.025155 GAGAGGACACCATCGAGCTAA 58.975 52.381 0.00 0.00 0.00 3.09
2447 2506 1.681538 GAGAGGACACCATCGAGCTA 58.318 55.000 0.00 0.00 0.00 3.32
2448 2507 1.040339 GGAGAGGACACCATCGAGCT 61.040 60.000 0.00 0.00 0.00 4.09
2449 2508 1.040339 AGGAGAGGACACCATCGAGC 61.040 60.000 0.00 0.00 0.00 5.03
2450 2509 1.407258 GAAGGAGAGGACACCATCGAG 59.593 57.143 0.00 0.00 0.00 4.04
2451 2510 1.006043 AGAAGGAGAGGACACCATCGA 59.994 52.381 0.00 0.00 31.71 3.59
2452 2511 1.479709 AGAAGGAGAGGACACCATCG 58.520 55.000 0.00 0.00 31.71 3.84
2453 2512 2.834549 TCAAGAAGGAGAGGACACCATC 59.165 50.000 0.00 0.00 0.00 3.51
2454 2513 2.907892 TCAAGAAGGAGAGGACACCAT 58.092 47.619 0.00 0.00 0.00 3.55
2455 2514 2.398754 TCAAGAAGGAGAGGACACCA 57.601 50.000 0.00 0.00 0.00 4.17
2456 2515 2.169561 GGATCAAGAAGGAGAGGACACC 59.830 54.545 0.00 0.00 0.00 4.16
2457 2516 2.834549 TGGATCAAGAAGGAGAGGACAC 59.165 50.000 0.00 0.00 0.00 3.67
2458 2517 3.102972 CTGGATCAAGAAGGAGAGGACA 58.897 50.000 0.00 0.00 0.00 4.02
2459 2518 2.158971 GCTGGATCAAGAAGGAGAGGAC 60.159 54.545 0.00 0.00 0.00 3.85
2460 2519 2.114616 GCTGGATCAAGAAGGAGAGGA 58.885 52.381 0.00 0.00 0.00 3.71
2461 2520 1.836166 TGCTGGATCAAGAAGGAGAGG 59.164 52.381 0.00 0.00 0.00 3.69
2462 2521 3.533547 CTTGCTGGATCAAGAAGGAGAG 58.466 50.000 0.00 0.00 44.61 3.20
2463 2522 2.355513 GCTTGCTGGATCAAGAAGGAGA 60.356 50.000 0.00 0.00 44.61 3.71
2464 2523 2.015587 GCTTGCTGGATCAAGAAGGAG 58.984 52.381 0.00 0.00 44.61 3.69
2465 2524 1.676916 CGCTTGCTGGATCAAGAAGGA 60.677 52.381 0.00 0.00 44.61 3.36
2466 2525 0.731417 CGCTTGCTGGATCAAGAAGG 59.269 55.000 0.00 0.00 44.61 3.46
2467 2526 1.664659 CTCGCTTGCTGGATCAAGAAG 59.335 52.381 0.00 3.38 44.61 2.85
2468 2527 1.676916 CCTCGCTTGCTGGATCAAGAA 60.677 52.381 0.00 0.00 44.61 2.52
2469 2528 0.107993 CCTCGCTTGCTGGATCAAGA 60.108 55.000 0.00 0.00 44.61 3.02
2470 2529 1.094073 CCCTCGCTTGCTGGATCAAG 61.094 60.000 0.00 0.00 44.63 3.02
2471 2530 1.078214 CCCTCGCTTGCTGGATCAA 60.078 57.895 0.00 0.00 0.00 2.57
2472 2531 1.964608 CTCCCTCGCTTGCTGGATCA 61.965 60.000 0.00 0.00 0.00 2.92
2473 2532 1.227497 CTCCCTCGCTTGCTGGATC 60.227 63.158 3.75 0.00 0.00 3.36
2474 2533 1.684386 CTCTCCCTCGCTTGCTGGAT 61.684 60.000 3.75 0.00 0.00 3.41
2475 2534 2.283894 TCTCCCTCGCTTGCTGGA 60.284 61.111 3.75 0.00 0.00 3.86
2476 2535 2.186384 CTCTCCCTCGCTTGCTGG 59.814 66.667 0.00 0.00 0.00 4.85
2477 2536 2.186384 CCTCTCCCTCGCTTGCTG 59.814 66.667 0.00 0.00 0.00 4.41
2478 2537 2.284258 ACCTCTCCCTCGCTTGCT 60.284 61.111 0.00 0.00 0.00 3.91
2479 2538 2.125350 CACCTCTCCCTCGCTTGC 60.125 66.667 0.00 0.00 0.00 4.01
2480 2539 0.970937 TACCACCTCTCCCTCGCTTG 60.971 60.000 0.00 0.00 0.00 4.01
2481 2540 0.684805 CTACCACCTCTCCCTCGCTT 60.685 60.000 0.00 0.00 0.00 4.68
2482 2541 1.076632 CTACCACCTCTCCCTCGCT 60.077 63.158 0.00 0.00 0.00 4.93
2483 2542 0.468400 ATCTACCACCTCTCCCTCGC 60.468 60.000 0.00 0.00 0.00 5.03
2484 2543 1.133761 TCATCTACCACCTCTCCCTCG 60.134 57.143 0.00 0.00 0.00 4.63
2485 2544 2.175931 TCTCATCTACCACCTCTCCCTC 59.824 54.545 0.00 0.00 0.00 4.30
2486 2545 2.218673 TCTCATCTACCACCTCTCCCT 58.781 52.381 0.00 0.00 0.00 4.20
2487 2546 2.757894 TCTCATCTACCACCTCTCCC 57.242 55.000 0.00 0.00 0.00 4.30
2488 2547 3.826157 CAGATCTCATCTACCACCTCTCC 59.174 52.174 0.00 0.00 37.58 3.71
2489 2548 4.724399 TCAGATCTCATCTACCACCTCTC 58.276 47.826 0.00 0.00 37.58 3.20
2490 2549 4.805140 TCAGATCTCATCTACCACCTCT 57.195 45.455 0.00 0.00 37.58 3.69
2491 2550 4.038642 GGTTCAGATCTCATCTACCACCTC 59.961 50.000 0.00 0.00 37.76 3.85
2492 2551 3.964031 GGTTCAGATCTCATCTACCACCT 59.036 47.826 0.00 0.00 37.76 4.00
2493 2552 3.706594 TGGTTCAGATCTCATCTACCACC 59.293 47.826 0.00 3.65 41.04 4.61
2494 2553 5.112686 GTTGGTTCAGATCTCATCTACCAC 58.887 45.833 7.41 2.10 43.92 4.16
2495 2554 4.777366 TGTTGGTTCAGATCTCATCTACCA 59.223 41.667 0.00 4.62 43.06 3.25
2496 2555 5.112686 GTGTTGGTTCAGATCTCATCTACC 58.887 45.833 0.00 0.00 38.14 3.18
2497 2556 4.800993 CGTGTTGGTTCAGATCTCATCTAC 59.199 45.833 0.00 0.00 37.58 2.59
2498 2557 4.705023 TCGTGTTGGTTCAGATCTCATCTA 59.295 41.667 0.00 0.00 37.58 1.98
2499 2558 3.511540 TCGTGTTGGTTCAGATCTCATCT 59.488 43.478 0.00 0.00 41.15 2.90
2500 2559 3.614616 GTCGTGTTGGTTCAGATCTCATC 59.385 47.826 0.00 0.00 0.00 2.92
2501 2560 3.589988 GTCGTGTTGGTTCAGATCTCAT 58.410 45.455 0.00 0.00 0.00 2.90
2502 2561 2.607038 CGTCGTGTTGGTTCAGATCTCA 60.607 50.000 0.00 0.00 0.00 3.27
2503 2562 1.986378 CGTCGTGTTGGTTCAGATCTC 59.014 52.381 0.00 0.00 0.00 2.75
2504 2563 1.611977 TCGTCGTGTTGGTTCAGATCT 59.388 47.619 0.00 0.00 0.00 2.75
2505 2564 1.719780 GTCGTCGTGTTGGTTCAGATC 59.280 52.381 0.00 0.00 0.00 2.75
2506 2565 1.779569 GTCGTCGTGTTGGTTCAGAT 58.220 50.000 0.00 0.00 0.00 2.90
2507 2566 0.593008 CGTCGTCGTGTTGGTTCAGA 60.593 55.000 0.00 0.00 0.00 3.27
2508 2567 1.844003 CGTCGTCGTGTTGGTTCAG 59.156 57.895 0.00 0.00 0.00 3.02
2509 2568 4.000543 CGTCGTCGTGTTGGTTCA 57.999 55.556 0.00 0.00 0.00 3.18
2519 2578 4.274700 ACCACCACCACGTCGTCG 62.275 66.667 0.00 0.00 43.34 5.12
2520 2579 2.660552 CACCACCACCACGTCGTC 60.661 66.667 0.00 0.00 0.00 4.20
2521 2580 4.230002 CCACCACCACCACGTCGT 62.230 66.667 0.00 0.00 0.00 4.34
2523 2582 4.555709 TGCCACCACCACCACGTC 62.556 66.667 0.00 0.00 0.00 4.34
2524 2583 4.562425 CTGCCACCACCACCACGT 62.562 66.667 0.00 0.00 0.00 4.49
2525 2584 4.562425 ACTGCCACCACCACCACG 62.562 66.667 0.00 0.00 0.00 4.94
2526 2585 2.906897 CACTGCCACCACCACCAC 60.907 66.667 0.00 0.00 0.00 4.16
2527 2586 4.202574 CCACTGCCACCACCACCA 62.203 66.667 0.00 0.00 0.00 4.17
2528 2587 2.713531 ATTCCACTGCCACCACCACC 62.714 60.000 0.00 0.00 0.00 4.61
2529 2588 0.827507 AATTCCACTGCCACCACCAC 60.828 55.000 0.00 0.00 0.00 4.16
2530 2589 0.539438 GAATTCCACTGCCACCACCA 60.539 55.000 0.00 0.00 0.00 4.17
2531 2590 1.250840 GGAATTCCACTGCCACCACC 61.251 60.000 20.04 0.00 35.64 4.61
2532 2591 1.586154 CGGAATTCCACTGCCACCAC 61.586 60.000 24.09 0.00 35.14 4.16
2533 2592 1.303236 CGGAATTCCACTGCCACCA 60.303 57.895 24.09 0.00 35.14 4.17
2534 2593 2.046285 CCGGAATTCCACTGCCACC 61.046 63.158 24.09 0.00 35.14 4.61
2535 2594 2.700773 GCCGGAATTCCACTGCCAC 61.701 63.158 24.09 1.43 35.14 5.01
2536 2595 2.361104 GCCGGAATTCCACTGCCA 60.361 61.111 24.09 0.00 35.14 4.92
2537 2596 2.361104 TGCCGGAATTCCACTGCC 60.361 61.111 24.09 7.46 35.14 4.85
2538 2597 2.409870 CCTGCCGGAATTCCACTGC 61.410 63.158 24.09 21.12 35.14 4.40
2539 2598 1.750399 CCCTGCCGGAATTCCACTG 60.750 63.158 24.09 17.25 35.14 3.66
2540 2599 2.677228 CCCTGCCGGAATTCCACT 59.323 61.111 24.09 0.00 35.14 4.00
2541 2600 3.140814 GCCCTGCCGGAATTCCAC 61.141 66.667 24.09 15.43 35.14 4.02
2542 2601 2.837031 GAAGCCCTGCCGGAATTCCA 62.837 60.000 24.09 4.04 35.14 3.53
2543 2602 2.043953 AAGCCCTGCCGGAATTCC 60.044 61.111 15.01 15.01 0.00 3.01
2544 2603 2.472909 CGAAGCCCTGCCGGAATTC 61.473 63.158 5.05 0.00 0.00 2.17
2545 2604 2.438434 CGAAGCCCTGCCGGAATT 60.438 61.111 5.05 0.00 0.00 2.17
2562 2621 3.876198 CACCGGTATGCGCTTGGC 61.876 66.667 6.87 0.00 43.96 4.52
2563 2622 1.302383 TTTCACCGGTATGCGCTTGG 61.302 55.000 6.87 5.66 0.00 3.61
2564 2623 0.732571 ATTTCACCGGTATGCGCTTG 59.267 50.000 6.87 0.00 0.00 4.01
2565 2624 0.732571 CATTTCACCGGTATGCGCTT 59.267 50.000 6.87 4.59 0.00 4.68
2566 2625 0.392461 ACATTTCACCGGTATGCGCT 60.392 50.000 6.87 0.00 0.00 5.92
2567 2626 0.248054 CACATTTCACCGGTATGCGC 60.248 55.000 6.87 0.00 0.00 6.09
2568 2627 0.376852 CCACATTTCACCGGTATGCG 59.623 55.000 6.87 1.25 0.00 4.73
2569 2628 0.738389 CCCACATTTCACCGGTATGC 59.262 55.000 6.87 0.00 0.00 3.14
2570 2629 2.288666 CTCCCACATTTCACCGGTATG 58.711 52.381 6.87 10.93 0.00 2.39
2571 2630 1.211949 CCTCCCACATTTCACCGGTAT 59.788 52.381 6.87 0.00 0.00 2.73
2572 2631 0.616371 CCTCCCACATTTCACCGGTA 59.384 55.000 6.87 0.00 0.00 4.02
2573 2632 1.378762 CCTCCCACATTTCACCGGT 59.621 57.895 0.00 0.00 0.00 5.28
2574 2633 0.960364 CACCTCCCACATTTCACCGG 60.960 60.000 0.00 0.00 0.00 5.28
2575 2634 0.250727 ACACCTCCCACATTTCACCG 60.251 55.000 0.00 0.00 0.00 4.94
2576 2635 1.613437 CAACACCTCCCACATTTCACC 59.387 52.381 0.00 0.00 0.00 4.02
2577 2636 1.613437 CCAACACCTCCCACATTTCAC 59.387 52.381 0.00 0.00 0.00 3.18
2578 2637 1.480312 CCCAACACCTCCCACATTTCA 60.480 52.381 0.00 0.00 0.00 2.69
2579 2638 1.203001 TCCCAACACCTCCCACATTTC 60.203 52.381 0.00 0.00 0.00 2.17
2580 2639 0.856982 TCCCAACACCTCCCACATTT 59.143 50.000 0.00 0.00 0.00 2.32
2581 2640 0.405585 CTCCCAACACCTCCCACATT 59.594 55.000 0.00 0.00 0.00 2.71
2582 2641 0.475632 TCTCCCAACACCTCCCACAT 60.476 55.000 0.00 0.00 0.00 3.21
2583 2642 1.074090 TCTCCCAACACCTCCCACA 60.074 57.895 0.00 0.00 0.00 4.17
2584 2643 1.679898 CTCTCCCAACACCTCCCAC 59.320 63.158 0.00 0.00 0.00 4.61
2585 2644 1.538876 CCTCTCCCAACACCTCCCA 60.539 63.158 0.00 0.00 0.00 4.37
2586 2645 0.252558 TACCTCTCCCAACACCTCCC 60.253 60.000 0.00 0.00 0.00 4.30
2587 2646 1.652947 TTACCTCTCCCAACACCTCC 58.347 55.000 0.00 0.00 0.00 4.30
2588 2647 2.092914 CCATTACCTCTCCCAACACCTC 60.093 54.545 0.00 0.00 0.00 3.85
2589 2648 1.916181 CCATTACCTCTCCCAACACCT 59.084 52.381 0.00 0.00 0.00 4.00
2590 2649 1.064685 CCCATTACCTCTCCCAACACC 60.065 57.143 0.00 0.00 0.00 4.16
2591 2650 1.682087 GCCCATTACCTCTCCCAACAC 60.682 57.143 0.00 0.00 0.00 3.32
2592 2651 0.623723 GCCCATTACCTCTCCCAACA 59.376 55.000 0.00 0.00 0.00 3.33
2593 2652 0.623723 TGCCCATTACCTCTCCCAAC 59.376 55.000 0.00 0.00 0.00 3.77
2594 2653 1.284785 CTTGCCCATTACCTCTCCCAA 59.715 52.381 0.00 0.00 0.00 4.12
2595 2654 0.918983 CTTGCCCATTACCTCTCCCA 59.081 55.000 0.00 0.00 0.00 4.37
2596 2655 0.183731 CCTTGCCCATTACCTCTCCC 59.816 60.000 0.00 0.00 0.00 4.30
2597 2656 0.183731 CCCTTGCCCATTACCTCTCC 59.816 60.000 0.00 0.00 0.00 3.71
2598 2657 0.919710 ACCCTTGCCCATTACCTCTC 59.080 55.000 0.00 0.00 0.00 3.20
2599 2658 0.919710 GACCCTTGCCCATTACCTCT 59.080 55.000 0.00 0.00 0.00 3.69
2600 2659 0.463833 CGACCCTTGCCCATTACCTC 60.464 60.000 0.00 0.00 0.00 3.85
2601 2660 0.912487 TCGACCCTTGCCCATTACCT 60.912 55.000 0.00 0.00 0.00 3.08
2602 2661 0.034863 TTCGACCCTTGCCCATTACC 60.035 55.000 0.00 0.00 0.00 2.85
2603 2662 1.379527 CTTCGACCCTTGCCCATTAC 58.620 55.000 0.00 0.00 0.00 1.89
2604 2663 0.254747 CCTTCGACCCTTGCCCATTA 59.745 55.000 0.00 0.00 0.00 1.90
2605 2664 1.000896 CCTTCGACCCTTGCCCATT 60.001 57.895 0.00 0.00 0.00 3.16
2606 2665 1.789576 AACCTTCGACCCTTGCCCAT 61.790 55.000 0.00 0.00 0.00 4.00
2607 2666 2.457323 AACCTTCGACCCTTGCCCA 61.457 57.895 0.00 0.00 0.00 5.36
2608 2667 1.971695 CAACCTTCGACCCTTGCCC 60.972 63.158 0.00 0.00 0.00 5.36
2609 2668 1.971695 CCAACCTTCGACCCTTGCC 60.972 63.158 0.00 0.00 0.00 4.52
2610 2669 0.822121 AACCAACCTTCGACCCTTGC 60.822 55.000 0.00 0.00 0.00 4.01
2611 2670 0.951558 CAACCAACCTTCGACCCTTG 59.048 55.000 0.00 0.00 0.00 3.61
2612 2671 0.822121 GCAACCAACCTTCGACCCTT 60.822 55.000 0.00 0.00 0.00 3.95
2613 2672 1.228154 GCAACCAACCTTCGACCCT 60.228 57.895 0.00 0.00 0.00 4.34
2614 2673 2.265904 GGCAACCAACCTTCGACCC 61.266 63.158 0.00 0.00 0.00 4.46
2615 2674 3.351450 GGCAACCAACCTTCGACC 58.649 61.111 0.00 0.00 0.00 4.79
2634 2693 2.132089 TAAAGGTGGGGAGGCGTTGG 62.132 60.000 0.00 0.00 0.00 3.77
2635 2694 0.034477 ATAAAGGTGGGGAGGCGTTG 60.034 55.000 0.00 0.00 0.00 4.10
2636 2695 1.587066 TATAAAGGTGGGGAGGCGTT 58.413 50.000 0.00 0.00 0.00 4.84
2637 2696 1.815757 ATATAAAGGTGGGGAGGCGT 58.184 50.000 0.00 0.00 0.00 5.68
2638 2697 3.170717 TCTATATAAAGGTGGGGAGGCG 58.829 50.000 0.00 0.00 0.00 5.52
2639 2698 4.536489 ACATCTATATAAAGGTGGGGAGGC 59.464 45.833 0.00 0.00 31.49 4.70
2640 2699 6.054860 CACATCTATATAAAGGTGGGGAGG 57.945 45.833 0.00 0.00 31.49 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.