Multiple sequence alignment - TraesCS1B01G222300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G222300 chr1B 100.000 3109 0 0 1 3109 399800757 399797649 0.000000e+00 5742.0
1 TraesCS1B01G222300 chr1B 96.875 128 4 0 1179 1306 303848276 303848149 6.750000e-52 215.0
2 TraesCS1B01G222300 chr1B 96.124 129 5 0 1179 1307 613039456 613039584 8.740000e-51 211.0
3 TraesCS1B01G222300 chr1D 96.274 1181 27 7 1397 2561 297378995 297377816 0.000000e+00 1921.0
4 TraesCS1B01G222300 chr1D 93.037 517 23 7 671 1182 297379569 297379061 0.000000e+00 743.0
5 TraesCS1B01G222300 chr1D 87.816 435 24 23 2683 3109 297377818 297377405 1.680000e-132 483.0
6 TraesCS1B01G222300 chr1A 92.178 1189 47 19 1397 2561 369997866 369996700 0.000000e+00 1639.0
7 TraesCS1B01G222300 chr1A 92.500 480 18 8 709 1182 369998403 369997936 0.000000e+00 671.0
8 TraesCS1B01G222300 chr1A 93.952 248 12 2 2864 3109 369996423 369996177 3.790000e-99 372.0
9 TraesCS1B01G222300 chr1A 89.344 244 18 3 356 591 369998681 369998438 1.810000e-77 300.0
10 TraesCS1B01G222300 chr1A 95.489 133 5 1 2557 2688 213289389 213289521 8.740000e-51 211.0
11 TraesCS1B01G222300 chr1A 90.541 148 12 2 2546 2692 27289709 27289563 8.800000e-46 195.0
12 TraesCS1B01G222300 chr1A 75.248 303 53 16 1821 2106 375015375 375015078 1.170000e-24 124.0
13 TraesCS1B01G222300 chr4D 82.155 297 45 3 24 319 386983438 386983149 6.660000e-62 248.0
14 TraesCS1B01G222300 chr3B 95.588 136 6 0 1180 1315 797463872 797464007 5.220000e-53 219.0
15 TraesCS1B01G222300 chr3B 86.842 114 13 2 1404 1516 766631535 766631647 3.250000e-25 126.0
16 TraesCS1B01G222300 chr7B 96.124 129 5 0 1179 1307 182718930 182718802 8.740000e-51 211.0
17 TraesCS1B01G222300 chr4A 96.850 127 3 1 2560 2685 705606351 705606477 8.740000e-51 211.0
18 TraesCS1B01G222300 chr6B 95.420 131 5 1 2558 2687 445884360 445884230 1.130000e-49 207.0
19 TraesCS1B01G222300 chr6B 85.586 111 14 2 1407 1516 438386655 438386546 7.050000e-22 115.0
20 TraesCS1B01G222300 chr5D 94.161 137 7 1 1180 1316 179062935 179063070 1.130000e-49 207.0
21 TraesCS1B01G222300 chr6A 96.063 127 4 1 2560 2685 563027339 563027465 4.060000e-49 206.0
22 TraesCS1B01G222300 chr6A 93.525 139 7 2 2551 2687 617047914 617047776 4.060000e-49 206.0
23 TraesCS1B01G222300 chr6A 88.750 160 14 4 1180 1338 6860097 6859941 3.160000e-45 193.0
24 TraesCS1B01G222300 chr5B 93.525 139 7 2 1180 1318 467497001 467496865 4.060000e-49 206.0
25 TraesCS1B01G222300 chr4B 93.571 140 6 3 1168 1307 601197322 601197186 4.060000e-49 206.0
26 TraesCS1B01G222300 chr3A 94.118 136 7 1 2549 2683 57259505 57259640 4.060000e-49 206.0
27 TraesCS1B01G222300 chr3A 90.132 152 13 2 2537 2686 494726767 494726918 2.450000e-46 196.0
28 TraesCS1B01G222300 chr2B 95.349 129 6 0 1179 1307 96093603 96093731 4.060000e-49 206.0
29 TraesCS1B01G222300 chr2B 93.805 113 7 0 1397 1509 678379409 678379521 1.480000e-38 171.0
30 TraesCS1B01G222300 chr2A 91.667 144 11 1 2543 2685 80885946 80886089 6.800000e-47 198.0
31 TraesCS1B01G222300 chr2A 98.230 113 2 0 1397 1509 706207811 706207923 6.800000e-47 198.0
32 TraesCS1B01G222300 chr2D 96.460 113 4 0 1397 1509 565937072 565937184 1.470000e-43 187.0
33 TraesCS1B01G222300 chr3D 86.842 114 13 2 1404 1516 575726148 575726260 3.250000e-25 126.0
34 TraesCS1B01G222300 chr6D 85.586 111 14 2 1407 1516 276456623 276456514 7.050000e-22 115.0
35 TraesCS1B01G222300 chrUn 89.583 48 3 2 2985 3032 87877417 87877462 3.350000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G222300 chr1B 399797649 399800757 3108 True 5742.0 5742 100.000000 1 3109 1 chr1B.!!$R2 3108
1 TraesCS1B01G222300 chr1D 297377405 297379569 2164 True 1049.0 1921 92.375667 671 3109 3 chr1D.!!$R1 2438
2 TraesCS1B01G222300 chr1A 369996177 369998681 2504 True 745.5 1639 91.993500 356 3109 4 chr1A.!!$R3 2753

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
193 194 0.107017 ATCGGCTCTGTTTCCATGGG 60.107 55.0 13.02 0.0 0.00 4.00 F
277 278 0.107081 TACCGTTGTTGAGGTGGTGG 59.893 55.0 0.00 0.0 41.51 4.61 F
331 332 0.179092 GCTGCCCTTGATGATTTGCC 60.179 55.0 0.00 0.0 0.00 4.52 F
1182 1200 0.250597 GCCCCAAAGACAACGGTACT 60.251 55.0 0.00 0.0 0.00 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1283 1301 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.0 5.23 0.0 44.66 2.12 R
1294 1312 0.179000 ATACGACGTACTCCCTCCGT 59.821 55.0 10.41 0.0 37.56 4.69 R
1295 1313 0.585357 CATACGACGTACTCCCTCCG 59.415 60.0 10.41 0.0 0.00 4.63 R
2812 3030 0.105709 GAGAGGGGGAAGAGGAGAGG 60.106 65.0 0.00 0.0 0.00 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.706555 GTAGGTCACTTTGCTTTGCC 57.293 50.000 0.00 0.00 0.00 4.52
20 21 1.069227 GTAGGTCACTTTGCTTTGCCG 60.069 52.381 0.00 0.00 0.00 5.69
21 22 1.007387 GGTCACTTTGCTTTGCCGG 60.007 57.895 0.00 0.00 0.00 6.13
22 23 1.007387 GTCACTTTGCTTTGCCGGG 60.007 57.895 2.18 0.00 0.00 5.73
23 24 2.356194 CACTTTGCTTTGCCGGGC 60.356 61.111 13.32 13.32 0.00 6.13
24 25 3.977244 ACTTTGCTTTGCCGGGCG 61.977 61.111 15.40 0.71 0.00 6.13
25 26 3.977244 CTTTGCTTTGCCGGGCGT 61.977 61.111 15.40 0.00 0.00 5.68
26 27 4.277593 TTTGCTTTGCCGGGCGTG 62.278 61.111 15.40 7.90 0.00 5.34
37 38 2.672996 GGGCGTGCAGGTCATGTT 60.673 61.111 13.68 0.00 34.19 2.71
38 39 2.690778 GGGCGTGCAGGTCATGTTC 61.691 63.158 13.68 0.00 34.19 3.18
39 40 1.672356 GGCGTGCAGGTCATGTTCT 60.672 57.895 6.05 0.00 34.19 3.01
40 41 0.391130 GGCGTGCAGGTCATGTTCTA 60.391 55.000 6.05 0.00 34.19 2.10
41 42 0.721718 GCGTGCAGGTCATGTTCTAC 59.278 55.000 8.40 0.00 34.19 2.59
42 43 1.939381 GCGTGCAGGTCATGTTCTACA 60.939 52.381 8.40 0.00 34.19 2.74
43 44 2.621338 CGTGCAGGTCATGTTCTACAT 58.379 47.619 0.00 0.00 39.91 2.29
55 56 5.916661 ATGTTCTACATGACGTTCTACCT 57.083 39.130 0.00 0.00 37.45 3.08
56 57 5.306532 TGTTCTACATGACGTTCTACCTC 57.693 43.478 0.00 0.00 0.00 3.85
57 58 5.008331 TGTTCTACATGACGTTCTACCTCT 58.992 41.667 0.00 0.00 0.00 3.69
58 59 5.123502 TGTTCTACATGACGTTCTACCTCTC 59.876 44.000 0.00 0.00 0.00 3.20
59 60 4.840271 TCTACATGACGTTCTACCTCTCA 58.160 43.478 0.00 0.00 0.00 3.27
60 61 5.250982 TCTACATGACGTTCTACCTCTCAA 58.749 41.667 0.00 0.00 0.00 3.02
61 62 5.886474 TCTACATGACGTTCTACCTCTCAAT 59.114 40.000 0.00 0.00 0.00 2.57
62 63 5.407407 ACATGACGTTCTACCTCTCAATT 57.593 39.130 0.00 0.00 0.00 2.32
63 64 5.794894 ACATGACGTTCTACCTCTCAATTT 58.205 37.500 0.00 0.00 0.00 1.82
64 65 5.869888 ACATGACGTTCTACCTCTCAATTTC 59.130 40.000 0.00 0.00 0.00 2.17
65 66 5.723672 TGACGTTCTACCTCTCAATTTCT 57.276 39.130 0.00 0.00 0.00 2.52
66 67 5.470368 TGACGTTCTACCTCTCAATTTCTG 58.530 41.667 0.00 0.00 0.00 3.02
67 68 4.246458 ACGTTCTACCTCTCAATTTCTGC 58.754 43.478 0.00 0.00 0.00 4.26
68 69 4.245660 CGTTCTACCTCTCAATTTCTGCA 58.754 43.478 0.00 0.00 0.00 4.41
69 70 4.690748 CGTTCTACCTCTCAATTTCTGCAA 59.309 41.667 0.00 0.00 0.00 4.08
70 71 5.389935 CGTTCTACCTCTCAATTTCTGCAAC 60.390 44.000 0.00 0.00 0.00 4.17
71 72 5.227569 TCTACCTCTCAATTTCTGCAACA 57.772 39.130 0.00 0.00 0.00 3.33
72 73 4.997395 TCTACCTCTCAATTTCTGCAACAC 59.003 41.667 0.00 0.00 0.00 3.32
73 74 3.825328 ACCTCTCAATTTCTGCAACACT 58.175 40.909 0.00 0.00 0.00 3.55
74 75 4.973168 ACCTCTCAATTTCTGCAACACTA 58.027 39.130 0.00 0.00 0.00 2.74
75 76 5.564550 ACCTCTCAATTTCTGCAACACTAT 58.435 37.500 0.00 0.00 0.00 2.12
76 77 5.645497 ACCTCTCAATTTCTGCAACACTATC 59.355 40.000 0.00 0.00 0.00 2.08
77 78 5.065731 CCTCTCAATTTCTGCAACACTATCC 59.934 44.000 0.00 0.00 0.00 2.59
78 79 5.559770 TCTCAATTTCTGCAACACTATCCA 58.440 37.500 0.00 0.00 0.00 3.41
79 80 6.182627 TCTCAATTTCTGCAACACTATCCAT 58.817 36.000 0.00 0.00 0.00 3.41
80 81 6.094464 TCTCAATTTCTGCAACACTATCCATG 59.906 38.462 0.00 0.00 0.00 3.66
81 82 5.711506 TCAATTTCTGCAACACTATCCATGT 59.288 36.000 0.00 0.00 0.00 3.21
82 83 6.209192 TCAATTTCTGCAACACTATCCATGTT 59.791 34.615 0.00 0.00 40.95 2.71
90 91 5.789643 AACACTATCCATGTTGCAAAAGT 57.210 34.783 0.00 0.00 38.84 2.66
91 92 5.376854 ACACTATCCATGTTGCAAAAGTC 57.623 39.130 0.00 0.00 0.00 3.01
92 93 4.218417 ACACTATCCATGTTGCAAAAGTCC 59.782 41.667 0.00 0.00 0.00 3.85
93 94 4.460382 CACTATCCATGTTGCAAAAGTCCT 59.540 41.667 0.00 0.00 0.00 3.85
94 95 5.047802 CACTATCCATGTTGCAAAAGTCCTT 60.048 40.000 0.00 0.00 0.00 3.36
95 96 4.525912 ATCCATGTTGCAAAAGTCCTTC 57.474 40.909 0.00 0.00 0.00 3.46
96 97 2.627699 TCCATGTTGCAAAAGTCCTTCC 59.372 45.455 0.00 0.00 0.00 3.46
97 98 2.607771 CCATGTTGCAAAAGTCCTTCCG 60.608 50.000 0.00 0.00 0.00 4.30
98 99 0.383949 TGTTGCAAAAGTCCTTCCGC 59.616 50.000 0.00 0.00 0.00 5.54
99 100 0.383949 GTTGCAAAAGTCCTTCCGCA 59.616 50.000 0.00 0.65 0.00 5.69
100 101 1.107114 TTGCAAAAGTCCTTCCGCAA 58.893 45.000 0.00 10.35 37.32 4.85
101 102 1.327303 TGCAAAAGTCCTTCCGCAAT 58.673 45.000 0.00 0.00 30.13 3.56
102 103 2.509569 TGCAAAAGTCCTTCCGCAATA 58.490 42.857 0.00 0.00 30.13 1.90
103 104 3.088532 TGCAAAAGTCCTTCCGCAATAT 58.911 40.909 0.00 0.00 30.13 1.28
104 105 3.509575 TGCAAAAGTCCTTCCGCAATATT 59.490 39.130 0.00 0.00 30.13 1.28
105 106 4.702612 TGCAAAAGTCCTTCCGCAATATTA 59.297 37.500 0.00 0.00 30.13 0.98
106 107 5.359576 TGCAAAAGTCCTTCCGCAATATTAT 59.640 36.000 0.00 0.00 30.13 1.28
107 108 5.915196 GCAAAAGTCCTTCCGCAATATTATC 59.085 40.000 0.00 0.00 0.00 1.75
108 109 6.238759 GCAAAAGTCCTTCCGCAATATTATCT 60.239 38.462 0.00 0.00 0.00 1.98
109 110 6.867662 AAAGTCCTTCCGCAATATTATCTG 57.132 37.500 0.00 0.00 0.00 2.90
110 111 5.552870 AGTCCTTCCGCAATATTATCTGT 57.447 39.130 0.00 0.00 0.00 3.41
111 112 5.300752 AGTCCTTCCGCAATATTATCTGTG 58.699 41.667 0.00 0.00 0.00 3.66
112 113 5.057149 GTCCTTCCGCAATATTATCTGTGT 58.943 41.667 0.00 0.00 0.00 3.72
113 114 5.527582 GTCCTTCCGCAATATTATCTGTGTT 59.472 40.000 0.00 0.00 0.00 3.32
114 115 5.527214 TCCTTCCGCAATATTATCTGTGTTG 59.473 40.000 0.00 0.00 0.00 3.33
115 116 4.811555 TCCGCAATATTATCTGTGTTGC 57.188 40.909 0.00 0.00 41.15 4.17
116 117 4.195416 TCCGCAATATTATCTGTGTTGCA 58.805 39.130 8.79 0.00 43.87 4.08
117 118 4.637977 TCCGCAATATTATCTGTGTTGCAA 59.362 37.500 0.00 0.00 43.87 4.08
118 119 5.124617 TCCGCAATATTATCTGTGTTGCAAA 59.875 36.000 0.00 0.00 43.87 3.68
119 120 5.804473 CCGCAATATTATCTGTGTTGCAAAA 59.196 36.000 0.00 0.00 43.87 2.44
120 121 6.309980 CCGCAATATTATCTGTGTTGCAAAAA 59.690 34.615 0.00 0.00 43.87 1.94
121 122 7.385650 CGCAATATTATCTGTGTTGCAAAAAG 58.614 34.615 0.00 0.00 43.87 2.27
122 123 7.062138 CGCAATATTATCTGTGTTGCAAAAAGT 59.938 33.333 0.00 0.00 43.87 2.66
123 124 8.164153 GCAATATTATCTGTGTTGCAAAAAGTG 58.836 33.333 0.00 0.00 43.33 3.16
124 125 9.409312 CAATATTATCTGTGTTGCAAAAAGTGA 57.591 29.630 0.00 0.00 0.00 3.41
125 126 9.979578 AATATTATCTGTGTTGCAAAAAGTGAA 57.020 25.926 0.00 0.00 0.00 3.18
126 127 7.935338 ATTATCTGTGTTGCAAAAAGTGAAG 57.065 32.000 0.00 0.00 0.00 3.02
127 128 5.581126 ATCTGTGTTGCAAAAAGTGAAGA 57.419 34.783 0.00 0.00 0.00 2.87
128 129 4.732784 TCTGTGTTGCAAAAAGTGAAGAC 58.267 39.130 0.00 0.00 0.00 3.01
129 130 3.497118 TGTGTTGCAAAAAGTGAAGACG 58.503 40.909 0.00 0.00 0.00 4.18
130 131 2.851824 GTGTTGCAAAAAGTGAAGACGG 59.148 45.455 0.00 0.00 0.00 4.79
131 132 2.750166 TGTTGCAAAAAGTGAAGACGGA 59.250 40.909 0.00 0.00 0.00 4.69
132 133 3.191581 TGTTGCAAAAAGTGAAGACGGAA 59.808 39.130 0.00 0.00 0.00 4.30
133 134 4.170256 GTTGCAAAAAGTGAAGACGGAAA 58.830 39.130 0.00 0.00 0.00 3.13
134 135 4.442375 TGCAAAAAGTGAAGACGGAAAA 57.558 36.364 0.00 0.00 0.00 2.29
135 136 4.810790 TGCAAAAAGTGAAGACGGAAAAA 58.189 34.783 0.00 0.00 0.00 1.94
156 157 3.837213 AAATCTGCAACACAATCTCCG 57.163 42.857 0.00 0.00 0.00 4.63
157 158 2.479566 ATCTGCAACACAATCTCCGT 57.520 45.000 0.00 0.00 0.00 4.69
158 159 2.254546 TCTGCAACACAATCTCCGTT 57.745 45.000 0.00 0.00 0.00 4.44
159 160 1.872952 TCTGCAACACAATCTCCGTTG 59.127 47.619 0.00 0.00 42.29 4.10
160 161 1.872952 CTGCAACACAATCTCCGTTGA 59.127 47.619 5.73 0.00 42.03 3.18
161 162 2.290367 CTGCAACACAATCTCCGTTGAA 59.710 45.455 5.73 0.00 42.03 2.69
162 163 2.884012 TGCAACACAATCTCCGTTGAAT 59.116 40.909 5.73 0.00 42.03 2.57
163 164 4.068599 TGCAACACAATCTCCGTTGAATA 58.931 39.130 5.73 0.00 42.03 1.75
164 165 4.699735 TGCAACACAATCTCCGTTGAATAT 59.300 37.500 5.73 0.00 42.03 1.28
165 166 5.182950 TGCAACACAATCTCCGTTGAATATT 59.817 36.000 5.73 0.00 42.03 1.28
166 167 6.092748 GCAACACAATCTCCGTTGAATATTT 58.907 36.000 5.73 0.00 42.03 1.40
167 168 7.094592 TGCAACACAATCTCCGTTGAATATTTA 60.095 33.333 5.73 0.00 42.03 1.40
168 169 7.915397 GCAACACAATCTCCGTTGAATATTTAT 59.085 33.333 5.73 0.00 42.03 1.40
169 170 9.225201 CAACACAATCTCCGTTGAATATTTATG 57.775 33.333 0.00 0.00 42.03 1.90
170 171 7.417612 ACACAATCTCCGTTGAATATTTATGC 58.582 34.615 0.00 0.00 33.37 3.14
171 172 7.066887 ACACAATCTCCGTTGAATATTTATGCA 59.933 33.333 0.00 0.00 33.37 3.96
172 173 7.914871 CACAATCTCCGTTGAATATTTATGCAA 59.085 33.333 0.00 0.00 33.37 4.08
173 174 7.915397 ACAATCTCCGTTGAATATTTATGCAAC 59.085 33.333 10.29 10.29 44.96 4.17
179 180 6.438327 GTTGAATATTTATGCAACATCGGC 57.562 37.500 14.10 0.00 46.73 5.54
180 181 6.208644 GTTGAATATTTATGCAACATCGGCT 58.791 36.000 14.10 0.00 46.73 5.52
181 182 6.000891 TGAATATTTATGCAACATCGGCTC 57.999 37.500 0.00 0.00 0.00 4.70
182 183 5.764686 TGAATATTTATGCAACATCGGCTCT 59.235 36.000 0.00 0.00 0.00 4.09
183 184 3.976793 ATTTATGCAACATCGGCTCTG 57.023 42.857 0.00 0.00 0.00 3.35
184 185 2.401583 TTATGCAACATCGGCTCTGT 57.598 45.000 0.00 0.00 0.00 3.41
185 186 2.401583 TATGCAACATCGGCTCTGTT 57.598 45.000 0.00 0.00 37.31 3.16
186 187 1.538047 ATGCAACATCGGCTCTGTTT 58.462 45.000 0.00 0.00 34.69 2.83
187 188 0.874390 TGCAACATCGGCTCTGTTTC 59.126 50.000 0.00 0.00 34.69 2.78
188 189 0.169009 GCAACATCGGCTCTGTTTCC 59.831 55.000 0.00 0.00 34.69 3.13
189 190 1.522668 CAACATCGGCTCTGTTTCCA 58.477 50.000 0.00 0.00 34.69 3.53
190 191 2.086869 CAACATCGGCTCTGTTTCCAT 58.913 47.619 0.00 0.00 34.69 3.41
191 192 1.742761 ACATCGGCTCTGTTTCCATG 58.257 50.000 0.00 0.00 0.00 3.66
192 193 1.019673 CATCGGCTCTGTTTCCATGG 58.980 55.000 4.97 4.97 0.00 3.66
193 194 0.107017 ATCGGCTCTGTTTCCATGGG 60.107 55.000 13.02 0.00 0.00 4.00
194 195 1.002134 CGGCTCTGTTTCCATGGGT 60.002 57.895 13.02 0.00 0.00 4.51
195 196 0.609131 CGGCTCTGTTTCCATGGGTT 60.609 55.000 13.02 0.00 0.00 4.11
196 197 1.177401 GGCTCTGTTTCCATGGGTTC 58.823 55.000 13.02 3.00 0.00 3.62
197 198 1.272147 GGCTCTGTTTCCATGGGTTCT 60.272 52.381 13.02 0.00 0.00 3.01
198 199 1.815003 GCTCTGTTTCCATGGGTTCTG 59.185 52.381 13.02 6.70 0.00 3.02
199 200 1.815003 CTCTGTTTCCATGGGTTCTGC 59.185 52.381 13.02 0.00 0.00 4.26
200 201 1.144708 TCTGTTTCCATGGGTTCTGCA 59.855 47.619 13.02 2.36 0.00 4.41
201 202 1.962807 CTGTTTCCATGGGTTCTGCAA 59.037 47.619 13.02 0.00 0.00 4.08
202 203 1.686052 TGTTTCCATGGGTTCTGCAAC 59.314 47.619 13.02 4.77 0.00 4.17
203 204 1.686052 GTTTCCATGGGTTCTGCAACA 59.314 47.619 13.02 0.00 33.70 3.33
204 205 2.079170 TTCCATGGGTTCTGCAACAA 57.921 45.000 13.02 0.00 33.70 2.83
205 206 2.307496 TCCATGGGTTCTGCAACAAT 57.693 45.000 13.02 0.00 33.70 2.71
206 207 1.894466 TCCATGGGTTCTGCAACAATG 59.106 47.619 13.02 0.00 33.70 2.82
207 208 1.894466 CCATGGGTTCTGCAACAATGA 59.106 47.619 2.85 0.00 33.14 2.57
208 209 2.353011 CCATGGGTTCTGCAACAATGAC 60.353 50.000 2.85 0.00 33.14 3.06
209 210 2.363306 TGGGTTCTGCAACAATGACT 57.637 45.000 0.00 0.00 33.70 3.41
210 211 2.665165 TGGGTTCTGCAACAATGACTT 58.335 42.857 0.00 0.00 33.70 3.01
211 212 3.030291 TGGGTTCTGCAACAATGACTTT 58.970 40.909 0.00 0.00 33.70 2.66
212 213 3.181477 TGGGTTCTGCAACAATGACTTTG 60.181 43.478 0.00 0.00 41.36 2.77
225 226 7.878477 ACAATGACTTTGTTGCAATAATGAG 57.122 32.000 22.84 14.87 46.51 2.90
226 227 6.869913 ACAATGACTTTGTTGCAATAATGAGG 59.130 34.615 22.84 11.13 46.51 3.86
227 228 6.839124 ATGACTTTGTTGCAATAATGAGGA 57.161 33.333 22.84 10.14 0.00 3.71
228 229 6.839124 TGACTTTGTTGCAATAATGAGGAT 57.161 33.333 22.84 5.81 0.00 3.24
229 230 6.623486 TGACTTTGTTGCAATAATGAGGATG 58.377 36.000 22.84 2.70 0.00 3.51
230 231 6.433716 TGACTTTGTTGCAATAATGAGGATGA 59.566 34.615 22.84 1.60 0.00 2.92
231 232 6.860080 ACTTTGTTGCAATAATGAGGATGAG 58.140 36.000 22.84 11.91 0.00 2.90
232 233 5.840243 TTGTTGCAATAATGAGGATGAGG 57.160 39.130 0.59 0.00 0.00 3.86
233 234 4.209538 TGTTGCAATAATGAGGATGAGGG 58.790 43.478 0.59 0.00 0.00 4.30
234 235 4.210331 GTTGCAATAATGAGGATGAGGGT 58.790 43.478 0.59 0.00 0.00 4.34
235 236 3.824133 TGCAATAATGAGGATGAGGGTG 58.176 45.455 0.00 0.00 0.00 4.61
236 237 3.152341 GCAATAATGAGGATGAGGGTGG 58.848 50.000 0.00 0.00 0.00 4.61
237 238 3.759581 CAATAATGAGGATGAGGGTGGG 58.240 50.000 0.00 0.00 0.00 4.61
238 239 1.140312 TAATGAGGATGAGGGTGGGC 58.860 55.000 0.00 0.00 0.00 5.36
239 240 1.649271 AATGAGGATGAGGGTGGGCC 61.649 60.000 0.00 0.00 0.00 5.80
240 241 3.866582 GAGGATGAGGGTGGGCCG 61.867 72.222 0.00 0.00 34.97 6.13
243 244 4.424711 GATGAGGGTGGGCCGCAA 62.425 66.667 20.39 1.18 34.97 4.85
244 245 4.431131 ATGAGGGTGGGCCGCAAG 62.431 66.667 20.39 0.00 34.97 4.01
246 247 4.115199 GAGGGTGGGCCGCAAGAT 62.115 66.667 20.39 0.40 43.02 2.40
247 248 2.690881 AGGGTGGGCCGCAAGATA 60.691 61.111 20.39 0.00 43.02 1.98
248 249 2.203209 GGGTGGGCCGCAAGATAG 60.203 66.667 20.39 0.00 43.02 2.08
249 250 2.742116 GGGTGGGCCGCAAGATAGA 61.742 63.158 20.39 0.00 43.02 1.98
250 251 1.523938 GGTGGGCCGCAAGATAGAC 60.524 63.158 20.39 0.00 43.02 2.59
251 252 1.522569 GTGGGCCGCAAGATAGACT 59.477 57.895 13.30 0.00 43.02 3.24
252 253 0.750850 GTGGGCCGCAAGATAGACTA 59.249 55.000 13.30 0.00 43.02 2.59
253 254 1.040646 TGGGCCGCAAGATAGACTAG 58.959 55.000 0.00 0.00 43.02 2.57
254 255 1.329256 GGGCCGCAAGATAGACTAGA 58.671 55.000 0.00 0.00 43.02 2.43
255 256 1.896465 GGGCCGCAAGATAGACTAGAT 59.104 52.381 0.00 0.00 43.02 1.98
256 257 2.094442 GGGCCGCAAGATAGACTAGATC 60.094 54.545 0.00 0.00 43.02 2.75
257 258 2.823154 GGCCGCAAGATAGACTAGATCT 59.177 50.000 0.00 0.00 40.23 2.75
258 259 3.257127 GGCCGCAAGATAGACTAGATCTT 59.743 47.826 0.00 0.00 43.01 2.40
259 260 4.459685 GGCCGCAAGATAGACTAGATCTTA 59.540 45.833 0.00 0.00 40.83 2.10
260 261 5.395642 GCCGCAAGATAGACTAGATCTTAC 58.604 45.833 0.00 0.00 40.83 2.34
261 262 5.620429 GCCGCAAGATAGACTAGATCTTACC 60.620 48.000 0.00 0.00 40.83 2.85
262 263 5.391097 CCGCAAGATAGACTAGATCTTACCG 60.391 48.000 0.00 7.20 40.83 4.02
263 264 5.179742 CGCAAGATAGACTAGATCTTACCGT 59.820 44.000 0.00 0.00 40.83 4.83
264 265 6.293516 CGCAAGATAGACTAGATCTTACCGTT 60.294 42.308 0.00 0.00 40.83 4.44
265 266 6.858993 GCAAGATAGACTAGATCTTACCGTTG 59.141 42.308 0.00 0.00 40.83 4.10
266 267 7.468906 GCAAGATAGACTAGATCTTACCGTTGT 60.469 40.741 0.00 0.00 40.83 3.32
267 268 8.407064 CAAGATAGACTAGATCTTACCGTTGTT 58.593 37.037 0.00 0.00 40.83 2.83
268 269 7.932335 AGATAGACTAGATCTTACCGTTGTTG 58.068 38.462 0.00 0.00 39.04 3.33
269 270 7.774157 AGATAGACTAGATCTTACCGTTGTTGA 59.226 37.037 0.00 0.00 39.04 3.18
270 271 6.197364 AGACTAGATCTTACCGTTGTTGAG 57.803 41.667 0.00 0.00 31.62 3.02
271 272 5.125739 AGACTAGATCTTACCGTTGTTGAGG 59.874 44.000 0.00 0.00 31.62 3.86
272 273 4.771054 ACTAGATCTTACCGTTGTTGAGGT 59.229 41.667 0.00 0.00 44.08 3.85
273 274 3.926616 AGATCTTACCGTTGTTGAGGTG 58.073 45.455 0.00 0.00 41.51 4.00
274 275 2.536761 TCTTACCGTTGTTGAGGTGG 57.463 50.000 0.00 0.00 41.51 4.61
275 276 1.764134 TCTTACCGTTGTTGAGGTGGT 59.236 47.619 0.00 0.00 41.51 4.16
276 277 1.871039 CTTACCGTTGTTGAGGTGGTG 59.129 52.381 0.00 0.00 41.51 4.17
277 278 0.107081 TACCGTTGTTGAGGTGGTGG 59.893 55.000 0.00 0.00 41.51 4.61
278 279 1.147376 CCGTTGTTGAGGTGGTGGA 59.853 57.895 0.00 0.00 0.00 4.02
279 280 0.250727 CCGTTGTTGAGGTGGTGGAT 60.251 55.000 0.00 0.00 0.00 3.41
280 281 1.156736 CGTTGTTGAGGTGGTGGATC 58.843 55.000 0.00 0.00 0.00 3.36
281 282 1.270839 CGTTGTTGAGGTGGTGGATCT 60.271 52.381 0.00 0.00 0.00 2.75
282 283 2.810400 CGTTGTTGAGGTGGTGGATCTT 60.810 50.000 0.00 0.00 0.00 2.40
283 284 3.222603 GTTGTTGAGGTGGTGGATCTTT 58.777 45.455 0.00 0.00 0.00 2.52
284 285 3.593442 TGTTGAGGTGGTGGATCTTTT 57.407 42.857 0.00 0.00 0.00 2.27
285 286 3.486383 TGTTGAGGTGGTGGATCTTTTC 58.514 45.455 0.00 0.00 0.00 2.29
286 287 3.117701 TGTTGAGGTGGTGGATCTTTTCA 60.118 43.478 0.00 0.00 0.00 2.69
287 288 3.423539 TGAGGTGGTGGATCTTTTCAG 57.576 47.619 0.00 0.00 0.00 3.02
288 289 2.978978 TGAGGTGGTGGATCTTTTCAGA 59.021 45.455 0.00 0.00 0.00 3.27
289 290 3.588842 TGAGGTGGTGGATCTTTTCAGAT 59.411 43.478 0.00 0.00 43.03 2.90
290 291 4.043310 TGAGGTGGTGGATCTTTTCAGATT 59.957 41.667 0.00 0.00 40.14 2.40
291 292 5.250543 TGAGGTGGTGGATCTTTTCAGATTA 59.749 40.000 0.00 0.00 40.14 1.75
292 293 6.069440 TGAGGTGGTGGATCTTTTCAGATTAT 60.069 38.462 0.00 0.00 40.14 1.28
293 294 6.360618 AGGTGGTGGATCTTTTCAGATTATC 58.639 40.000 0.00 0.00 40.14 1.75
294 295 5.532779 GGTGGTGGATCTTTTCAGATTATCC 59.467 44.000 0.00 0.00 40.14 2.59
295 296 5.237344 GTGGTGGATCTTTTCAGATTATCCG 59.763 44.000 0.00 0.00 40.14 4.18
296 297 5.104527 TGGTGGATCTTTTCAGATTATCCGT 60.105 40.000 0.00 0.00 40.14 4.69
297 298 5.467063 GGTGGATCTTTTCAGATTATCCGTC 59.533 44.000 0.00 0.00 40.14 4.79
298 299 5.175856 GTGGATCTTTTCAGATTATCCGTCG 59.824 44.000 0.00 0.00 40.14 5.12
299 300 4.686554 GGATCTTTTCAGATTATCCGTCGG 59.313 45.833 4.39 4.39 40.14 4.79
300 301 4.730949 TCTTTTCAGATTATCCGTCGGT 57.269 40.909 11.88 1.23 0.00 4.69
301 302 5.840243 TCTTTTCAGATTATCCGTCGGTA 57.160 39.130 11.88 0.19 0.00 4.02
302 303 5.828747 TCTTTTCAGATTATCCGTCGGTAG 58.171 41.667 11.88 0.00 0.00 3.18
303 304 5.591472 TCTTTTCAGATTATCCGTCGGTAGA 59.409 40.000 11.88 0.00 0.00 2.59
304 305 6.264744 TCTTTTCAGATTATCCGTCGGTAGAT 59.735 38.462 11.88 3.52 0.00 1.98
305 306 5.372547 TTCAGATTATCCGTCGGTAGATG 57.627 43.478 11.88 4.60 0.00 2.90
306 307 3.190744 TCAGATTATCCGTCGGTAGATGC 59.809 47.826 11.88 0.00 32.12 3.91
307 308 2.161808 AGATTATCCGTCGGTAGATGCG 59.838 50.000 11.88 0.00 32.12 4.73
308 309 1.311859 TTATCCGTCGGTAGATGCGT 58.688 50.000 11.88 0.00 32.12 5.24
309 310 2.168326 TATCCGTCGGTAGATGCGTA 57.832 50.000 11.88 0.00 32.12 4.42
310 311 0.873054 ATCCGTCGGTAGATGCGTAG 59.127 55.000 11.88 0.00 32.12 3.51
323 324 2.202932 CGTAGCGCTGCCCTTGAT 60.203 61.111 22.90 0.00 0.00 2.57
324 325 2.528743 CGTAGCGCTGCCCTTGATG 61.529 63.158 22.90 0.00 0.00 3.07
325 326 1.153369 GTAGCGCTGCCCTTGATGA 60.153 57.895 22.90 0.00 0.00 2.92
326 327 0.533755 GTAGCGCTGCCCTTGATGAT 60.534 55.000 22.90 0.00 0.00 2.45
327 328 0.181114 TAGCGCTGCCCTTGATGATT 59.819 50.000 22.90 0.00 0.00 2.57
328 329 0.682209 AGCGCTGCCCTTGATGATTT 60.682 50.000 10.39 0.00 0.00 2.17
329 330 0.526954 GCGCTGCCCTTGATGATTTG 60.527 55.000 0.00 0.00 0.00 2.32
330 331 0.526954 CGCTGCCCTTGATGATTTGC 60.527 55.000 0.00 0.00 0.00 3.68
331 332 0.179092 GCTGCCCTTGATGATTTGCC 60.179 55.000 0.00 0.00 0.00 4.52
332 333 1.481871 CTGCCCTTGATGATTTGCCT 58.518 50.000 0.00 0.00 0.00 4.75
333 334 1.407979 CTGCCCTTGATGATTTGCCTC 59.592 52.381 0.00 0.00 0.00 4.70
334 335 1.272592 TGCCCTTGATGATTTGCCTCA 60.273 47.619 0.00 0.00 0.00 3.86
335 336 1.407979 GCCCTTGATGATTTGCCTCAG 59.592 52.381 0.00 0.00 0.00 3.35
336 337 2.029623 CCCTTGATGATTTGCCTCAGG 58.970 52.381 0.00 0.00 0.00 3.86
350 351 4.590850 GCCTCAGGCTTATTTTAATGGG 57.409 45.455 9.09 0.00 46.69 4.00
351 352 3.243873 GCCTCAGGCTTATTTTAATGGGC 60.244 47.826 9.09 0.00 46.69 5.36
352 353 3.960102 CCTCAGGCTTATTTTAATGGGCA 59.040 43.478 0.00 0.00 0.00 5.36
353 354 4.038402 CCTCAGGCTTATTTTAATGGGCAG 59.962 45.833 0.00 0.00 0.00 4.85
354 355 4.865905 TCAGGCTTATTTTAATGGGCAGA 58.134 39.130 0.00 0.00 0.00 4.26
369 370 0.601311 GCAGACCCTATCCGTCATGC 60.601 60.000 0.00 0.00 32.41 4.06
382 383 6.910536 ATCCGTCATGCTTAAAGTTAGAAG 57.089 37.500 0.00 0.00 0.00 2.85
387 388 7.746475 CCGTCATGCTTAAAGTTAGAAGAAAAG 59.254 37.037 2.38 0.00 0.00 2.27
390 392 8.567948 TCATGCTTAAAGTTAGAAGAAAAGTGG 58.432 33.333 2.38 0.00 0.00 4.00
396 398 4.145052 AGTTAGAAGAAAAGTGGGGCAAG 58.855 43.478 0.00 0.00 0.00 4.01
401 403 3.532641 AGAAAAGTGGGGCAAGAGATT 57.467 42.857 0.00 0.00 0.00 2.40
410 412 3.765511 TGGGGCAAGAGATTCAATTTCTG 59.234 43.478 0.00 0.00 0.00 3.02
444 446 2.138596 ACGTTTTGTATCGACGGTGT 57.861 45.000 0.00 0.00 40.82 4.16
511 513 1.647084 GGGTTCACTGACACGTTGC 59.353 57.895 0.00 0.00 0.00 4.17
525 527 0.722469 CGTTGCTGCACGTTGATGAC 60.722 55.000 0.00 0.00 35.34 3.06
533 535 1.069022 GCACGTTGATGACAAGTGCAT 60.069 47.619 20.56 0.00 46.75 3.96
545 548 4.094739 TGACAAGTGCATGGATAATGTTCG 59.905 41.667 0.00 0.00 38.65 3.95
552 555 1.934589 TGGATAATGTTCGAGCCACG 58.065 50.000 0.00 0.00 44.09 4.94
574 583 3.308053 GGGAAACTAGGAATCGCGTAAAC 59.692 47.826 5.77 0.00 0.00 2.01
578 587 2.234414 ACTAGGAATCGCGTAAACCCAA 59.766 45.455 5.77 0.00 0.00 4.12
591 600 2.035626 CCCAACCATCCTGGCGTT 59.964 61.111 0.00 0.00 42.67 4.84
592 601 1.606313 CCCAACCATCCTGGCGTTT 60.606 57.895 0.00 0.00 42.67 3.60
593 602 1.595093 CCCAACCATCCTGGCGTTTC 61.595 60.000 0.00 0.00 42.67 2.78
594 603 0.609131 CCAACCATCCTGGCGTTTCT 60.609 55.000 0.00 0.00 42.67 2.52
595 604 0.804989 CAACCATCCTGGCGTTTCTC 59.195 55.000 0.00 0.00 42.67 2.87
596 605 0.400213 AACCATCCTGGCGTTTCTCA 59.600 50.000 0.00 0.00 42.67 3.27
597 606 0.400213 ACCATCCTGGCGTTTCTCAA 59.600 50.000 0.00 0.00 42.67 3.02
598 607 1.202879 ACCATCCTGGCGTTTCTCAAA 60.203 47.619 0.00 0.00 42.67 2.69
599 608 1.885887 CCATCCTGGCGTTTCTCAAAA 59.114 47.619 0.00 0.00 0.00 2.44
600 609 2.295909 CCATCCTGGCGTTTCTCAAAAA 59.704 45.455 0.00 0.00 0.00 1.94
621 630 1.665442 AAAAACCATCCTGGCGTGC 59.335 52.632 0.00 0.00 42.67 5.34
622 631 1.112315 AAAAACCATCCTGGCGTGCA 61.112 50.000 0.00 0.00 42.67 4.57
623 632 1.805428 AAAACCATCCTGGCGTGCAC 61.805 55.000 6.82 6.82 42.67 4.57
624 633 2.697147 AAACCATCCTGGCGTGCACT 62.697 55.000 16.19 0.00 42.67 4.40
625 634 1.836999 AACCATCCTGGCGTGCACTA 61.837 55.000 16.19 0.00 42.67 2.74
626 635 1.522355 CCATCCTGGCGTGCACTAG 60.522 63.158 16.19 10.16 0.00 2.57
627 636 2.176273 CATCCTGGCGTGCACTAGC 61.176 63.158 16.19 11.80 42.57 3.42
628 637 2.362369 ATCCTGGCGTGCACTAGCT 61.362 57.895 16.19 0.00 42.74 3.32
629 638 2.584261 ATCCTGGCGTGCACTAGCTG 62.584 60.000 16.19 8.85 42.74 4.24
630 639 2.816958 CTGGCGTGCACTAGCTGG 60.817 66.667 16.19 0.00 42.74 4.85
631 640 3.300934 CTGGCGTGCACTAGCTGGA 62.301 63.158 16.19 0.12 42.74 3.86
632 641 2.047274 GGCGTGCACTAGCTGGAA 60.047 61.111 16.19 0.00 42.74 3.53
633 642 1.671054 GGCGTGCACTAGCTGGAAA 60.671 57.895 16.19 0.00 42.74 3.13
634 643 1.234615 GGCGTGCACTAGCTGGAAAA 61.235 55.000 16.19 0.00 42.74 2.29
635 644 0.804989 GCGTGCACTAGCTGGAAAAT 59.195 50.000 16.19 0.00 42.74 1.82
636 645 1.202076 GCGTGCACTAGCTGGAAAATC 60.202 52.381 16.19 0.00 42.74 2.17
637 646 2.076100 CGTGCACTAGCTGGAAAATCA 58.924 47.619 16.19 0.00 42.74 2.57
638 647 2.679837 CGTGCACTAGCTGGAAAATCAT 59.320 45.455 16.19 0.00 42.74 2.45
639 648 3.242543 CGTGCACTAGCTGGAAAATCATC 60.243 47.826 16.19 0.00 42.74 2.92
640 649 3.691118 GTGCACTAGCTGGAAAATCATCA 59.309 43.478 10.32 0.00 42.74 3.07
641 650 4.156556 GTGCACTAGCTGGAAAATCATCAA 59.843 41.667 10.32 0.00 42.74 2.57
642 651 4.397103 TGCACTAGCTGGAAAATCATCAAG 59.603 41.667 3.17 0.00 42.74 3.02
643 652 4.732938 GCACTAGCTGGAAAATCATCAAGC 60.733 45.833 3.17 0.00 45.17 4.01
644 653 4.397103 CACTAGCTGGAAAATCATCAAGCA 59.603 41.667 3.17 0.00 46.88 3.91
645 654 4.639310 ACTAGCTGGAAAATCATCAAGCAG 59.361 41.667 3.17 4.61 46.88 4.24
646 655 3.428532 AGCTGGAAAATCATCAAGCAGT 58.571 40.909 6.46 0.00 46.88 4.40
647 656 4.592942 AGCTGGAAAATCATCAAGCAGTA 58.407 39.130 6.46 0.00 46.88 2.74
648 657 4.397417 AGCTGGAAAATCATCAAGCAGTAC 59.603 41.667 6.46 0.00 46.88 2.73
649 658 4.156556 GCTGGAAAATCATCAAGCAGTACA 59.843 41.667 0.00 0.00 44.38 2.90
650 659 5.627499 TGGAAAATCATCAAGCAGTACAC 57.373 39.130 0.00 0.00 0.00 2.90
651 660 4.458989 TGGAAAATCATCAAGCAGTACACC 59.541 41.667 0.00 0.00 0.00 4.16
652 661 4.458989 GGAAAATCATCAAGCAGTACACCA 59.541 41.667 0.00 0.00 0.00 4.17
653 662 5.376854 AAAATCATCAAGCAGTACACCAC 57.623 39.130 0.00 0.00 0.00 4.16
654 663 3.701205 ATCATCAAGCAGTACACCACA 57.299 42.857 0.00 0.00 0.00 4.17
655 664 3.483808 TCATCAAGCAGTACACCACAA 57.516 42.857 0.00 0.00 0.00 3.33
656 665 3.814625 TCATCAAGCAGTACACCACAAA 58.185 40.909 0.00 0.00 0.00 2.83
657 666 3.563808 TCATCAAGCAGTACACCACAAAC 59.436 43.478 0.00 0.00 0.00 2.93
658 667 1.937223 TCAAGCAGTACACCACAAACG 59.063 47.619 0.00 0.00 0.00 3.60
659 668 1.668751 CAAGCAGTACACCACAAACGT 59.331 47.619 0.00 0.00 0.00 3.99
660 669 2.032680 AGCAGTACACCACAAACGTT 57.967 45.000 0.00 0.00 0.00 3.99
661 670 3.182341 AGCAGTACACCACAAACGTTA 57.818 42.857 0.00 0.00 0.00 3.18
662 671 3.735591 AGCAGTACACCACAAACGTTAT 58.264 40.909 0.00 0.00 0.00 1.89
663 672 4.885413 AGCAGTACACCACAAACGTTATA 58.115 39.130 0.00 0.00 0.00 0.98
664 673 4.927425 AGCAGTACACCACAAACGTTATAG 59.073 41.667 0.00 0.00 0.00 1.31
665 674 4.092383 GCAGTACACCACAAACGTTATAGG 59.908 45.833 0.00 6.24 0.00 2.57
666 675 4.628333 CAGTACACCACAAACGTTATAGGG 59.372 45.833 0.00 3.88 0.00 3.53
667 676 4.527816 AGTACACCACAAACGTTATAGGGA 59.472 41.667 0.00 0.00 0.00 4.20
668 677 4.563140 ACACCACAAACGTTATAGGGAT 57.437 40.909 0.00 0.00 0.00 3.85
669 678 4.510571 ACACCACAAACGTTATAGGGATC 58.489 43.478 0.00 0.00 0.00 3.36
687 696 4.737601 GCATTACCGCGACACAAC 57.262 55.556 8.23 0.00 0.00 3.32
690 699 1.529010 GCATTACCGCGACACAACATC 60.529 52.381 8.23 0.00 0.00 3.06
692 701 1.424403 TTACCGCGACACAACATCTG 58.576 50.000 8.23 0.00 0.00 2.90
693 702 0.315886 TACCGCGACACAACATCTGT 59.684 50.000 8.23 0.00 39.56 3.41
697 706 1.790043 CGCGACACAACATCTGTTACA 59.210 47.619 0.00 0.00 35.47 2.41
698 707 2.411748 CGCGACACAACATCTGTTACAT 59.588 45.455 0.00 0.00 35.47 2.29
699 708 3.481951 CGCGACACAACATCTGTTACATC 60.482 47.826 0.00 0.00 35.47 3.06
700 709 3.181520 GCGACACAACATCTGTTACATCC 60.182 47.826 0.00 0.00 35.47 3.51
702 711 4.450757 CGACACAACATCTGTTACATCCAA 59.549 41.667 0.00 0.00 35.47 3.53
703 712 5.049749 CGACACAACATCTGTTACATCCAAA 60.050 40.000 0.00 0.00 35.47 3.28
704 713 6.348458 CGACACAACATCTGTTACATCCAAAT 60.348 38.462 0.00 0.00 35.47 2.32
705 714 7.288810 ACACAACATCTGTTACATCCAAATT 57.711 32.000 0.00 0.00 35.47 1.82
706 715 7.147312 ACACAACATCTGTTACATCCAAATTG 58.853 34.615 0.00 0.00 35.47 2.32
707 716 7.014134 ACACAACATCTGTTACATCCAAATTGA 59.986 33.333 0.00 0.00 35.47 2.57
713 722 7.773489 TCTGTTACATCCAAATTGATTTCCA 57.227 32.000 0.00 0.00 0.00 3.53
908 926 2.247437 GCCGCTGATCCATCCGTTC 61.247 63.158 0.00 0.00 0.00 3.95
974 992 3.119291 CTGACACTCACTCACAAGTCAC 58.881 50.000 0.00 0.00 31.71 3.67
1125 1143 0.546122 ACAACAACCAGTGGCTCTCA 59.454 50.000 9.78 0.00 0.00 3.27
1182 1200 0.250597 GCCCCAAAGACAACGGTACT 60.251 55.000 0.00 0.00 0.00 2.73
1183 1201 1.804601 CCCCAAAGACAACGGTACTC 58.195 55.000 0.00 0.00 0.00 2.59
1185 1203 1.609841 CCCAAAGACAACGGTACTCCC 60.610 57.143 0.00 0.00 0.00 4.30
1187 1205 2.612221 CCAAAGACAACGGTACTCCCTC 60.612 54.545 0.00 0.00 0.00 4.30
1188 1206 1.264295 AAGACAACGGTACTCCCTCC 58.736 55.000 0.00 0.00 0.00 4.30
1193 1211 3.207669 CGGTACTCCCTCCGTCCG 61.208 72.222 0.00 0.00 41.58 4.79
1195 1213 1.379044 GGTACTCCCTCCGTCCGAA 60.379 63.158 0.00 0.00 0.00 4.30
1196 1214 0.967380 GGTACTCCCTCCGTCCGAAA 60.967 60.000 0.00 0.00 0.00 3.46
1197 1215 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
1198 1216 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
1199 1217 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
1200 1218 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
1201 1219 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
1202 1220 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
1203 1221 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
1204 1222 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
1205 1223 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
1206 1224 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
1207 1225 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
1208 1226 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
1209 1227 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
1210 1228 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
1211 1229 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
1212 1230 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
1213 1231 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
1214 1232 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
1215 1233 8.020819 GTCCGAAAATACTTGTCATCAAAATGA 58.979 33.333 0.00 0.00 39.63 2.57
1216 1234 8.572185 TCCGAAAATACTTGTCATCAAAATGAA 58.428 29.630 0.00 0.00 43.42 2.57
1217 1235 8.638565 CCGAAAATACTTGTCATCAAAATGAAC 58.361 33.333 0.00 0.00 43.42 3.18
1218 1236 9.179552 CGAAAATACTTGTCATCAAAATGAACA 57.820 29.630 0.00 0.00 43.42 3.18
1293 1311 9.801873 ATTTATTTTGATGACAAGTATTTCCGG 57.198 29.630 0.00 0.00 37.32 5.14
1294 1312 8.568676 TTATTTTGATGACAAGTATTTCCGGA 57.431 30.769 0.00 0.00 37.32 5.14
1295 1313 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
1296 1314 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
1297 1315 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
1298 1316 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
1299 1317 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
1300 1318 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
1301 1319 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
1302 1320 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
1303 1321 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
1304 1322 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
1305 1323 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
1306 1324 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
1307 1325 3.207669 CCGGACGGAGGGAGTACG 61.208 72.222 4.40 0.00 44.88 3.67
1308 1326 2.437359 CGGACGGAGGGAGTACGT 60.437 66.667 0.00 0.00 40.75 3.57
1310 1328 3.096791 GACGGAGGGAGTACGTCG 58.903 66.667 0.00 0.00 45.82 5.12
1311 1329 1.743252 GACGGAGGGAGTACGTCGT 60.743 63.158 2.21 2.21 45.82 4.34
1312 1330 0.460284 GACGGAGGGAGTACGTCGTA 60.460 60.000 0.00 0.00 45.82 3.43
1313 1331 0.179000 ACGGAGGGAGTACGTCGTAT 59.821 55.000 8.59 0.00 35.77 3.06
1314 1332 0.585357 CGGAGGGAGTACGTCGTATG 59.415 60.000 8.59 0.00 34.85 2.39
1315 1333 1.807755 CGGAGGGAGTACGTCGTATGA 60.808 57.143 8.59 0.00 34.85 2.15
1316 1334 2.502295 GGAGGGAGTACGTCGTATGAT 58.498 52.381 8.59 0.00 34.85 2.45
1317 1335 2.483491 GGAGGGAGTACGTCGTATGATC 59.517 54.545 8.59 7.41 34.85 2.92
1318 1336 2.483491 GAGGGAGTACGTCGTATGATCC 59.517 54.545 18.71 18.71 0.00 3.36
1319 1337 2.158711 AGGGAGTACGTCGTATGATCCA 60.159 50.000 24.05 0.00 0.00 3.41
1320 1338 2.818432 GGGAGTACGTCGTATGATCCAT 59.182 50.000 24.05 0.00 0.00 3.41
1321 1339 3.255149 GGGAGTACGTCGTATGATCCATT 59.745 47.826 24.05 0.00 0.00 3.16
1322 1340 4.261909 GGGAGTACGTCGTATGATCCATTT 60.262 45.833 24.05 1.93 0.00 2.32
1323 1341 4.680110 GGAGTACGTCGTATGATCCATTTG 59.320 45.833 20.61 0.00 0.00 2.32
1324 1342 5.258456 AGTACGTCGTATGATCCATTTGT 57.742 39.130 8.59 0.00 0.00 2.83
1325 1343 6.381481 AGTACGTCGTATGATCCATTTGTA 57.619 37.500 8.59 0.00 0.00 2.41
1326 1344 6.204359 AGTACGTCGTATGATCCATTTGTAC 58.796 40.000 8.59 0.00 0.00 2.90
1327 1345 5.258456 ACGTCGTATGATCCATTTGTACT 57.742 39.130 0.00 0.00 0.00 2.73
1328 1346 6.381481 ACGTCGTATGATCCATTTGTACTA 57.619 37.500 0.00 0.00 0.00 1.82
1335 1353 7.655732 CGTATGATCCATTTGTACTACATTCCA 59.344 37.037 0.00 0.00 0.00 3.53
1347 1365 8.877864 TGTACTACATTCCATTTTCTTGGATT 57.122 30.769 0.00 0.00 45.08 3.01
1353 1371 6.943718 ACATTCCATTTTCTTGGATTGCAATT 59.056 30.769 14.33 0.00 45.02 2.32
1354 1372 7.449086 ACATTCCATTTTCTTGGATTGCAATTT 59.551 29.630 14.33 0.00 45.02 1.82
1355 1373 6.804770 TCCATTTTCTTGGATTGCAATTTG 57.195 33.333 14.33 4.67 40.90 2.32
1356 1374 5.181622 TCCATTTTCTTGGATTGCAATTTGC 59.818 36.000 14.33 14.49 40.90 3.68
1357 1375 5.048643 CCATTTTCTTGGATTGCAATTTGCA 60.049 36.000 19.77 19.77 45.10 4.08
1373 1391 4.722193 CAATCTTGCTCGGTGGGT 57.278 55.556 0.00 0.00 0.00 4.51
1374 1392 3.853104 CAATCTTGCTCGGTGGGTA 57.147 52.632 0.00 0.00 0.00 3.69
1376 1394 3.469008 CAATCTTGCTCGGTGGGTATA 57.531 47.619 0.00 0.00 0.00 1.47
1381 1399 3.635373 TCTTGCTCGGTGGGTATACTTAG 59.365 47.826 2.25 0.00 0.00 2.18
1383 1401 2.091720 TGCTCGGTGGGTATACTTAGGA 60.092 50.000 2.25 0.00 0.00 2.94
1384 1402 2.961062 GCTCGGTGGGTATACTTAGGAA 59.039 50.000 2.25 0.00 0.00 3.36
1388 1406 5.957132 TCGGTGGGTATACTTAGGAATAGT 58.043 41.667 2.25 0.00 0.00 2.12
1390 1408 6.266103 TCGGTGGGTATACTTAGGAATAGTTG 59.734 42.308 2.25 0.00 0.00 3.16
1391 1409 6.228995 GGTGGGTATACTTAGGAATAGTTGC 58.771 44.000 2.25 0.00 0.00 4.17
1392 1410 5.924825 GTGGGTATACTTAGGAATAGTTGCG 59.075 44.000 2.25 0.00 0.00 4.85
1393 1411 4.928020 GGGTATACTTAGGAATAGTTGCGC 59.072 45.833 0.00 0.00 0.00 6.09
1394 1412 4.620184 GGTATACTTAGGAATAGTTGCGCG 59.380 45.833 0.00 0.00 0.00 6.86
1395 1413 1.287425 ACTTAGGAATAGTTGCGCGC 58.713 50.000 27.26 27.26 0.00 6.86
1540 1564 0.179205 CTACTCCGTCCACGTCGTTC 60.179 60.000 0.00 0.00 37.74 3.95
1551 1581 3.945921 TCCACGTCGTTCAGATCTTCTAT 59.054 43.478 0.00 0.00 0.00 1.98
1617 1647 1.986575 GATCAAGTGCCAGAAGCCGC 61.987 60.000 0.00 0.00 42.71 6.53
1705 1735 2.105128 CATCGACCTCTCCGGCAC 59.895 66.667 0.00 0.00 35.61 5.01
1766 1796 4.493747 CGGTCGTTCGGGGAGCTC 62.494 72.222 4.71 4.71 0.00 4.09
1826 1856 1.341383 GGCACCAAGATCACCTTCCAT 60.341 52.381 0.00 0.00 31.42 3.41
1868 1898 3.296709 CTACCTGGCCGTGCTCGTT 62.297 63.158 7.47 0.00 35.01 3.85
2088 2118 1.870055 GAAGGCCGACACCGTCTACA 61.870 60.000 0.00 0.00 35.56 2.74
2458 2503 4.495349 CGCACCTGATTCTAAATTGAGCTG 60.495 45.833 0.00 0.00 0.00 4.24
2561 2610 5.694910 TGAAGCTGCAACTACTACTTTGTAC 59.305 40.000 1.02 0.00 0.00 2.90
2562 2611 5.470047 AGCTGCAACTACTACTTTGTACT 57.530 39.130 1.02 0.00 0.00 2.73
2563 2612 5.471257 AGCTGCAACTACTACTTTGTACTC 58.529 41.667 1.02 0.00 0.00 2.59
2564 2613 5.244178 AGCTGCAACTACTACTTTGTACTCT 59.756 40.000 1.02 0.00 0.00 3.24
2565 2614 5.573669 GCTGCAACTACTACTTTGTACTCTC 59.426 44.000 0.00 0.00 0.00 3.20
2566 2615 6.570764 GCTGCAACTACTACTTTGTACTCTCT 60.571 42.308 0.00 0.00 0.00 3.10
2567 2616 6.910995 TGCAACTACTACTTTGTACTCTCTC 58.089 40.000 0.00 0.00 0.00 3.20
2568 2617 6.022821 GCAACTACTACTTTGTACTCTCTCG 58.977 44.000 0.00 0.00 0.00 4.04
2569 2618 6.544622 CAACTACTACTTTGTACTCTCTCGG 58.455 44.000 0.00 0.00 0.00 4.63
2570 2619 5.803552 ACTACTACTTTGTACTCTCTCGGT 58.196 41.667 0.00 0.00 0.00 4.69
2571 2620 6.237154 ACTACTACTTTGTACTCTCTCGGTT 58.763 40.000 0.00 0.00 0.00 4.44
2572 2621 5.625921 ACTACTTTGTACTCTCTCGGTTC 57.374 43.478 0.00 0.00 0.00 3.62
2573 2622 3.938289 ACTTTGTACTCTCTCGGTTCC 57.062 47.619 0.00 0.00 0.00 3.62
2574 2623 2.228343 ACTTTGTACTCTCTCGGTTCCG 59.772 50.000 4.74 4.74 0.00 4.30
2575 2624 2.189594 TTGTACTCTCTCGGTTCCGA 57.810 50.000 13.34 13.34 36.95 4.55
2576 2625 2.189594 TGTACTCTCTCGGTTCCGAA 57.810 50.000 14.79 5.84 38.03 4.30
2577 2626 2.719739 TGTACTCTCTCGGTTCCGAAT 58.280 47.619 14.79 2.09 38.03 3.34
2578 2627 3.087031 TGTACTCTCTCGGTTCCGAATT 58.913 45.455 14.79 0.00 38.03 2.17
2579 2628 4.264253 TGTACTCTCTCGGTTCCGAATTA 58.736 43.478 14.79 3.46 38.03 1.40
2580 2629 3.779271 ACTCTCTCGGTTCCGAATTAC 57.221 47.619 14.79 0.00 38.03 1.89
2581 2630 3.354467 ACTCTCTCGGTTCCGAATTACT 58.646 45.455 14.79 0.00 38.03 2.24
2582 2631 3.762823 ACTCTCTCGGTTCCGAATTACTT 59.237 43.478 14.79 0.00 38.03 2.24
2583 2632 4.106029 TCTCTCGGTTCCGAATTACTTG 57.894 45.455 14.79 2.23 38.03 3.16
2584 2633 3.508793 TCTCTCGGTTCCGAATTACTTGT 59.491 43.478 14.79 0.00 38.03 3.16
2585 2634 3.841643 TCTCGGTTCCGAATTACTTGTC 58.158 45.455 14.79 0.00 38.03 3.18
2586 2635 3.508793 TCTCGGTTCCGAATTACTTGTCT 59.491 43.478 14.79 0.00 38.03 3.41
2587 2636 4.021719 TCTCGGTTCCGAATTACTTGTCTT 60.022 41.667 14.79 0.00 38.03 3.01
2588 2637 5.183713 TCTCGGTTCCGAATTACTTGTCTTA 59.816 40.000 14.79 0.00 38.03 2.10
2589 2638 5.404946 TCGGTTCCGAATTACTTGTCTTAG 58.595 41.667 11.66 0.00 35.41 2.18
2590 2639 5.183713 TCGGTTCCGAATTACTTGTCTTAGA 59.816 40.000 11.66 0.00 35.41 2.10
2591 2640 6.040878 CGGTTCCGAATTACTTGTCTTAGAT 58.959 40.000 5.19 0.00 0.00 1.98
2592 2641 6.534079 CGGTTCCGAATTACTTGTCTTAGATT 59.466 38.462 5.19 0.00 0.00 2.40
2593 2642 7.064253 CGGTTCCGAATTACTTGTCTTAGATTT 59.936 37.037 5.19 0.00 0.00 2.17
2594 2643 9.374838 GGTTCCGAATTACTTGTCTTAGATTTA 57.625 33.333 0.00 0.00 0.00 1.40
2625 2674 8.988064 ATACGGATGTATCTAGCACTAAAATG 57.012 34.615 0.00 0.00 36.56 2.32
2626 2675 7.050970 ACGGATGTATCTAGCACTAAAATGA 57.949 36.000 0.00 0.00 0.00 2.57
2627 2676 7.148641 ACGGATGTATCTAGCACTAAAATGAG 58.851 38.462 0.00 0.00 0.00 2.90
2628 2677 7.148641 CGGATGTATCTAGCACTAAAATGAGT 58.851 38.462 0.00 0.00 0.00 3.41
2629 2678 7.327275 CGGATGTATCTAGCACTAAAATGAGTC 59.673 40.741 0.00 0.00 0.00 3.36
2630 2679 8.364142 GGATGTATCTAGCACTAAAATGAGTCT 58.636 37.037 0.00 0.00 0.00 3.24
2633 2682 9.628500 TGTATCTAGCACTAAAATGAGTCTAGA 57.372 33.333 11.59 11.59 38.76 2.43
2637 2686 9.628500 TCTAGCACTAAAATGAGTCTAGATACA 57.372 33.333 0.00 0.00 34.65 2.29
2640 2689 9.142014 AGCACTAAAATGAGTCTAGATACATCT 57.858 33.333 12.66 0.00 40.86 2.90
2641 2690 9.190858 GCACTAAAATGAGTCTAGATACATCTG 57.809 37.037 12.66 7.80 37.76 2.90
2660 2709 7.851228 ACATCTGTATGTAGACAAATCCAAGA 58.149 34.615 0.00 0.00 44.66 3.02
2661 2710 7.766278 ACATCTGTATGTAGACAAATCCAAGAC 59.234 37.037 0.00 0.00 44.66 3.01
2662 2711 7.239763 TCTGTATGTAGACAAATCCAAGACA 57.760 36.000 0.00 0.00 0.00 3.41
2663 2712 7.676004 TCTGTATGTAGACAAATCCAAGACAA 58.324 34.615 0.00 0.00 0.00 3.18
2664 2713 7.819415 TCTGTATGTAGACAAATCCAAGACAAG 59.181 37.037 0.00 0.00 0.00 3.16
2665 2714 7.450074 TGTATGTAGACAAATCCAAGACAAGT 58.550 34.615 0.00 0.00 0.00 3.16
2666 2715 8.590204 TGTATGTAGACAAATCCAAGACAAGTA 58.410 33.333 0.00 0.00 0.00 2.24
2667 2716 9.431887 GTATGTAGACAAATCCAAGACAAGTAA 57.568 33.333 0.00 0.00 0.00 2.24
2669 2718 8.918202 TGTAGACAAATCCAAGACAAGTAATT 57.082 30.769 0.00 0.00 0.00 1.40
2670 2719 8.999431 TGTAGACAAATCCAAGACAAGTAATTC 58.001 33.333 0.00 0.00 0.00 2.17
2671 2720 7.133891 AGACAAATCCAAGACAAGTAATTCG 57.866 36.000 0.00 0.00 0.00 3.34
2672 2721 6.149474 AGACAAATCCAAGACAAGTAATTCGG 59.851 38.462 0.00 0.00 0.00 4.30
2673 2722 6.001460 ACAAATCCAAGACAAGTAATTCGGA 58.999 36.000 0.00 0.00 0.00 4.55
2674 2723 6.488683 ACAAATCCAAGACAAGTAATTCGGAA 59.511 34.615 0.00 0.00 0.00 4.30
2675 2724 6.496338 AATCCAAGACAAGTAATTCGGAAC 57.504 37.500 0.00 0.00 0.00 3.62
2694 2743 0.179161 CGAGGGAGTAGCTGTGTTCG 60.179 60.000 0.00 0.00 0.00 3.95
2716 2765 1.369625 GGATGTCCGGCAAACACTAG 58.630 55.000 0.00 0.00 0.00 2.57
2717 2766 1.066430 GGATGTCCGGCAAACACTAGA 60.066 52.381 0.00 0.00 0.00 2.43
2725 2774 3.192844 CCGGCAAACACTAGACTTCTCTA 59.807 47.826 0.00 0.00 0.00 2.43
2800 3018 3.914426 ATATATCATCGTCCAAGCCCC 57.086 47.619 0.00 0.00 0.00 5.80
2801 3019 1.434188 ATATCATCGTCCAAGCCCCA 58.566 50.000 0.00 0.00 0.00 4.96
2802 3020 0.468226 TATCATCGTCCAAGCCCCAC 59.532 55.000 0.00 0.00 0.00 4.61
2803 3021 1.274703 ATCATCGTCCAAGCCCCACT 61.275 55.000 0.00 0.00 0.00 4.00
2804 3022 0.616395 TCATCGTCCAAGCCCCACTA 60.616 55.000 0.00 0.00 0.00 2.74
2805 3023 0.462047 CATCGTCCAAGCCCCACTAC 60.462 60.000 0.00 0.00 0.00 2.73
2806 3024 0.617820 ATCGTCCAAGCCCCACTACT 60.618 55.000 0.00 0.00 0.00 2.57
2807 3025 0.834687 TCGTCCAAGCCCCACTACTT 60.835 55.000 0.00 0.00 0.00 2.24
2808 3026 0.899720 CGTCCAAGCCCCACTACTTA 59.100 55.000 0.00 0.00 0.00 2.24
2809 3027 1.405121 CGTCCAAGCCCCACTACTTAC 60.405 57.143 0.00 0.00 0.00 2.34
2810 3028 0.899720 TCCAAGCCCCACTACTTACG 59.100 55.000 0.00 0.00 0.00 3.18
2811 3029 0.611714 CCAAGCCCCACTACTTACGT 59.388 55.000 0.00 0.00 0.00 3.57
2812 3030 1.405121 CCAAGCCCCACTACTTACGTC 60.405 57.143 0.00 0.00 0.00 4.34
2813 3031 0.900421 AAGCCCCACTACTTACGTCC 59.100 55.000 0.00 0.00 0.00 4.79
2831 3049 0.105709 CCTCTCCTCTTCCCCCTCTC 60.106 65.000 0.00 0.00 0.00 3.20
2838 3056 2.026729 CCTCTTCCCCCTCTCTGTTTTC 60.027 54.545 0.00 0.00 0.00 2.29
2927 3146 6.879276 TGGTTTACCAAATGAAATCGTGTA 57.121 33.333 0.00 0.00 44.35 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.069227 CGGCAAAGCAAAGTGACCTAC 60.069 52.381 0.00 0.00 0.00 3.18
1 2 1.234821 CGGCAAAGCAAAGTGACCTA 58.765 50.000 0.00 0.00 0.00 3.08
2 3 1.455383 CCGGCAAAGCAAAGTGACCT 61.455 55.000 0.00 0.00 0.00 3.85
3 4 1.007387 CCGGCAAAGCAAAGTGACC 60.007 57.895 0.00 0.00 0.00 4.02
4 5 1.007387 CCCGGCAAAGCAAAGTGAC 60.007 57.895 0.00 0.00 0.00 3.67
5 6 2.855514 GCCCGGCAAAGCAAAGTGA 61.856 57.895 3.91 0.00 0.00 3.41
6 7 2.356194 GCCCGGCAAAGCAAAGTG 60.356 61.111 3.91 0.00 0.00 3.16
7 8 3.977244 CGCCCGGCAAAGCAAAGT 61.977 61.111 10.77 0.00 0.00 2.66
8 9 3.977244 ACGCCCGGCAAAGCAAAG 61.977 61.111 10.77 0.00 0.00 2.77
9 10 4.277593 CACGCCCGGCAAAGCAAA 62.278 61.111 10.77 0.00 0.00 3.68
20 21 2.672996 AACATGACCTGCACGCCC 60.673 61.111 0.00 0.00 0.00 6.13
21 22 0.391130 TAGAACATGACCTGCACGCC 60.391 55.000 0.00 0.00 0.00 5.68
22 23 0.721718 GTAGAACATGACCTGCACGC 59.278 55.000 0.00 0.00 0.00 5.34
23 24 2.078849 TGTAGAACATGACCTGCACG 57.921 50.000 0.00 0.00 0.00 5.34
33 34 5.652891 AGAGGTAGAACGTCATGTAGAACAT 59.347 40.000 0.00 0.00 39.91 2.71
34 35 5.008331 AGAGGTAGAACGTCATGTAGAACA 58.992 41.667 0.00 0.00 35.60 3.18
35 36 5.123502 TGAGAGGTAGAACGTCATGTAGAAC 59.876 44.000 0.00 0.00 35.60 3.01
36 37 5.250982 TGAGAGGTAGAACGTCATGTAGAA 58.749 41.667 0.00 0.00 35.60 2.10
37 38 4.840271 TGAGAGGTAGAACGTCATGTAGA 58.160 43.478 0.00 0.00 35.60 2.59
38 39 5.562506 TTGAGAGGTAGAACGTCATGTAG 57.437 43.478 0.00 0.00 35.60 2.74
39 40 6.525578 AATTGAGAGGTAGAACGTCATGTA 57.474 37.500 0.00 0.00 35.60 2.29
40 41 5.407407 AATTGAGAGGTAGAACGTCATGT 57.593 39.130 0.00 0.00 35.60 3.21
41 42 6.035435 CAGAAATTGAGAGGTAGAACGTCATG 59.965 42.308 0.00 0.00 35.60 3.07
42 43 6.102663 CAGAAATTGAGAGGTAGAACGTCAT 58.897 40.000 0.00 0.00 35.60 3.06
43 44 5.470368 CAGAAATTGAGAGGTAGAACGTCA 58.530 41.667 0.00 0.00 35.60 4.35
44 45 4.327627 GCAGAAATTGAGAGGTAGAACGTC 59.672 45.833 0.00 0.00 33.51 4.34
45 46 4.246458 GCAGAAATTGAGAGGTAGAACGT 58.754 43.478 0.00 0.00 0.00 3.99
46 47 4.245660 TGCAGAAATTGAGAGGTAGAACG 58.754 43.478 0.00 0.00 0.00 3.95
47 48 5.470098 TGTTGCAGAAATTGAGAGGTAGAAC 59.530 40.000 0.00 0.00 0.00 3.01
48 49 5.470098 GTGTTGCAGAAATTGAGAGGTAGAA 59.530 40.000 0.00 0.00 0.00 2.10
49 50 4.997395 GTGTTGCAGAAATTGAGAGGTAGA 59.003 41.667 0.00 0.00 0.00 2.59
50 51 4.999950 AGTGTTGCAGAAATTGAGAGGTAG 59.000 41.667 0.00 0.00 0.00 3.18
51 52 4.973168 AGTGTTGCAGAAATTGAGAGGTA 58.027 39.130 0.00 0.00 0.00 3.08
52 53 3.825328 AGTGTTGCAGAAATTGAGAGGT 58.175 40.909 0.00 0.00 0.00 3.85
53 54 5.065731 GGATAGTGTTGCAGAAATTGAGAGG 59.934 44.000 0.00 0.00 0.00 3.69
54 55 5.645067 TGGATAGTGTTGCAGAAATTGAGAG 59.355 40.000 0.00 0.00 0.00 3.20
55 56 5.559770 TGGATAGTGTTGCAGAAATTGAGA 58.440 37.500 0.00 0.00 0.00 3.27
56 57 5.885230 TGGATAGTGTTGCAGAAATTGAG 57.115 39.130 0.00 0.00 0.00 3.02
57 58 5.711506 ACATGGATAGTGTTGCAGAAATTGA 59.288 36.000 0.00 0.00 0.00 2.57
58 59 5.957798 ACATGGATAGTGTTGCAGAAATTG 58.042 37.500 0.00 0.00 0.00 2.32
59 60 6.392354 CAACATGGATAGTGTTGCAGAAATT 58.608 36.000 6.12 0.00 46.64 1.82
60 61 5.957798 CAACATGGATAGTGTTGCAGAAAT 58.042 37.500 6.12 0.00 46.64 2.17
61 62 5.375417 CAACATGGATAGTGTTGCAGAAA 57.625 39.130 6.12 0.00 46.64 2.52
68 69 5.278957 GGACTTTTGCAACATGGATAGTGTT 60.279 40.000 0.00 0.00 40.23 3.32
69 70 4.218417 GGACTTTTGCAACATGGATAGTGT 59.782 41.667 0.00 0.00 0.00 3.55
70 71 4.460382 AGGACTTTTGCAACATGGATAGTG 59.540 41.667 0.00 0.00 0.00 2.74
71 72 4.666512 AGGACTTTTGCAACATGGATAGT 58.333 39.130 0.00 0.00 0.00 2.12
72 73 5.393461 GGAAGGACTTTTGCAACATGGATAG 60.393 44.000 0.00 0.00 0.00 2.08
73 74 4.462483 GGAAGGACTTTTGCAACATGGATA 59.538 41.667 0.00 0.00 0.00 2.59
74 75 3.259123 GGAAGGACTTTTGCAACATGGAT 59.741 43.478 0.00 0.00 0.00 3.41
75 76 2.627699 GGAAGGACTTTTGCAACATGGA 59.372 45.455 0.00 0.00 0.00 3.41
76 77 2.607771 CGGAAGGACTTTTGCAACATGG 60.608 50.000 0.00 0.00 0.00 3.66
77 78 2.664916 CGGAAGGACTTTTGCAACATG 58.335 47.619 0.00 0.00 0.00 3.21
78 79 1.000274 GCGGAAGGACTTTTGCAACAT 60.000 47.619 0.00 0.00 0.00 2.71
79 80 0.383949 GCGGAAGGACTTTTGCAACA 59.616 50.000 0.00 0.00 0.00 3.33
80 81 0.383949 TGCGGAAGGACTTTTGCAAC 59.616 50.000 0.00 0.00 32.64 4.17
81 82 1.107114 TTGCGGAAGGACTTTTGCAA 58.893 45.000 15.99 15.99 39.17 4.08
82 83 1.327303 ATTGCGGAAGGACTTTTGCA 58.673 45.000 0.00 7.71 33.35 4.08
83 84 3.782889 ATATTGCGGAAGGACTTTTGC 57.217 42.857 0.00 3.45 0.00 3.68
84 85 7.134815 CAGATAATATTGCGGAAGGACTTTTG 58.865 38.462 0.00 0.00 0.00 2.44
85 86 6.828785 ACAGATAATATTGCGGAAGGACTTTT 59.171 34.615 0.00 0.00 0.00 2.27
86 87 6.260936 CACAGATAATATTGCGGAAGGACTTT 59.739 38.462 0.00 0.00 0.00 2.66
87 88 5.760253 CACAGATAATATTGCGGAAGGACTT 59.240 40.000 0.00 0.00 0.00 3.01
88 89 5.163301 ACACAGATAATATTGCGGAAGGACT 60.163 40.000 0.00 0.00 0.00 3.85
89 90 5.057149 ACACAGATAATATTGCGGAAGGAC 58.943 41.667 0.00 0.00 0.00 3.85
90 91 5.290493 ACACAGATAATATTGCGGAAGGA 57.710 39.130 0.00 0.00 0.00 3.36
91 92 5.751680 CAACACAGATAATATTGCGGAAGG 58.248 41.667 0.00 0.00 0.00 3.46
92 93 5.207768 GCAACACAGATAATATTGCGGAAG 58.792 41.667 0.00 0.00 36.63 3.46
93 94 4.637977 TGCAACACAGATAATATTGCGGAA 59.362 37.500 0.00 0.00 46.81 4.30
94 95 4.195416 TGCAACACAGATAATATTGCGGA 58.805 39.130 0.00 0.00 46.81 5.54
95 96 4.550577 TGCAACACAGATAATATTGCGG 57.449 40.909 0.00 0.00 46.81 5.69
96 97 6.867799 TTTTGCAACACAGATAATATTGCG 57.132 33.333 0.00 0.00 46.81 4.85
97 98 8.164153 CACTTTTTGCAACACAGATAATATTGC 58.836 33.333 0.00 0.00 44.66 3.56
98 99 9.409312 TCACTTTTTGCAACACAGATAATATTG 57.591 29.630 0.00 0.00 0.00 1.90
99 100 9.979578 TTCACTTTTTGCAACACAGATAATATT 57.020 25.926 0.00 0.00 0.00 1.28
100 101 9.630098 CTTCACTTTTTGCAACACAGATAATAT 57.370 29.630 0.00 0.00 0.00 1.28
101 102 8.845227 TCTTCACTTTTTGCAACACAGATAATA 58.155 29.630 0.00 0.00 0.00 0.98
102 103 7.649306 GTCTTCACTTTTTGCAACACAGATAAT 59.351 33.333 0.00 0.00 0.00 1.28
103 104 6.972328 GTCTTCACTTTTTGCAACACAGATAA 59.028 34.615 0.00 0.00 0.00 1.75
104 105 6.494842 GTCTTCACTTTTTGCAACACAGATA 58.505 36.000 0.00 0.00 0.00 1.98
105 106 5.343249 GTCTTCACTTTTTGCAACACAGAT 58.657 37.500 0.00 0.00 0.00 2.90
106 107 4.671508 CGTCTTCACTTTTTGCAACACAGA 60.672 41.667 0.00 0.00 0.00 3.41
107 108 3.543494 CGTCTTCACTTTTTGCAACACAG 59.457 43.478 0.00 0.00 0.00 3.66
108 109 3.497118 CGTCTTCACTTTTTGCAACACA 58.503 40.909 0.00 0.00 0.00 3.72
109 110 2.851824 CCGTCTTCACTTTTTGCAACAC 59.148 45.455 0.00 0.00 0.00 3.32
110 111 2.750166 TCCGTCTTCACTTTTTGCAACA 59.250 40.909 0.00 0.00 0.00 3.33
111 112 3.414549 TCCGTCTTCACTTTTTGCAAC 57.585 42.857 0.00 0.00 0.00 4.17
112 113 4.442375 TTTCCGTCTTCACTTTTTGCAA 57.558 36.364 0.00 0.00 0.00 4.08
113 114 4.442375 TTTTCCGTCTTCACTTTTTGCA 57.558 36.364 0.00 0.00 0.00 4.08
134 135 4.037923 ACGGAGATTGTGTTGCAGATTTTT 59.962 37.500 0.00 0.00 0.00 1.94
135 136 3.569701 ACGGAGATTGTGTTGCAGATTTT 59.430 39.130 0.00 0.00 0.00 1.82
136 137 3.149196 ACGGAGATTGTGTTGCAGATTT 58.851 40.909 0.00 0.00 0.00 2.17
137 138 2.783135 ACGGAGATTGTGTTGCAGATT 58.217 42.857 0.00 0.00 0.00 2.40
138 139 2.479566 ACGGAGATTGTGTTGCAGAT 57.520 45.000 0.00 0.00 0.00 2.90
139 140 1.872952 CAACGGAGATTGTGTTGCAGA 59.127 47.619 0.00 0.00 36.87 4.26
140 141 1.872952 TCAACGGAGATTGTGTTGCAG 59.127 47.619 0.00 0.00 42.00 4.41
141 142 1.960417 TCAACGGAGATTGTGTTGCA 58.040 45.000 0.00 0.00 42.00 4.08
142 143 3.559238 ATTCAACGGAGATTGTGTTGC 57.441 42.857 0.00 0.00 42.00 4.17
143 144 9.225201 CATAAATATTCAACGGAGATTGTGTTG 57.775 33.333 0.00 0.00 43.26 3.33
144 145 7.915397 GCATAAATATTCAACGGAGATTGTGTT 59.085 33.333 0.00 0.00 0.00 3.32
145 146 7.066887 TGCATAAATATTCAACGGAGATTGTGT 59.933 33.333 0.00 0.00 0.00 3.72
146 147 7.416817 TGCATAAATATTCAACGGAGATTGTG 58.583 34.615 0.00 0.00 0.00 3.33
147 148 7.566760 TGCATAAATATTCAACGGAGATTGT 57.433 32.000 0.00 0.00 0.00 2.71
148 149 7.914871 TGTTGCATAAATATTCAACGGAGATTG 59.085 33.333 10.05 0.00 40.90 2.67
149 150 7.995289 TGTTGCATAAATATTCAACGGAGATT 58.005 30.769 10.05 0.00 40.90 2.40
150 151 7.566760 TGTTGCATAAATATTCAACGGAGAT 57.433 32.000 10.05 0.00 40.90 2.75
151 152 6.993786 TGTTGCATAAATATTCAACGGAGA 57.006 33.333 10.05 0.00 40.90 3.71
152 153 6.574832 CGATGTTGCATAAATATTCAACGGAG 59.425 38.462 10.05 2.59 40.90 4.63
153 154 6.426327 CGATGTTGCATAAATATTCAACGGA 58.574 36.000 10.05 0.00 40.90 4.69
154 155 5.624900 CCGATGTTGCATAAATATTCAACGG 59.375 40.000 10.05 8.51 40.90 4.44
155 156 5.115472 GCCGATGTTGCATAAATATTCAACG 59.885 40.000 10.05 4.37 40.90 4.10
156 157 6.208644 AGCCGATGTTGCATAAATATTCAAC 58.791 36.000 8.42 8.42 39.29 3.18
157 158 6.262944 AGAGCCGATGTTGCATAAATATTCAA 59.737 34.615 0.00 0.00 0.00 2.69
158 159 5.764686 AGAGCCGATGTTGCATAAATATTCA 59.235 36.000 0.00 0.00 0.00 2.57
159 160 6.082338 CAGAGCCGATGTTGCATAAATATTC 58.918 40.000 0.00 0.00 0.00 1.75
160 161 5.532406 ACAGAGCCGATGTTGCATAAATATT 59.468 36.000 0.00 0.00 0.00 1.28
161 162 5.065914 ACAGAGCCGATGTTGCATAAATAT 58.934 37.500 0.00 0.00 0.00 1.28
162 163 4.450976 ACAGAGCCGATGTTGCATAAATA 58.549 39.130 0.00 0.00 0.00 1.40
163 164 3.282021 ACAGAGCCGATGTTGCATAAAT 58.718 40.909 0.00 0.00 0.00 1.40
164 165 2.710377 ACAGAGCCGATGTTGCATAAA 58.290 42.857 0.00 0.00 0.00 1.40
165 166 2.401583 ACAGAGCCGATGTTGCATAA 57.598 45.000 0.00 0.00 0.00 1.90
166 167 2.401583 AACAGAGCCGATGTTGCATA 57.598 45.000 0.00 0.00 39.36 3.14
167 168 1.470098 GAAACAGAGCCGATGTTGCAT 59.530 47.619 0.00 0.00 39.91 3.96
168 169 0.874390 GAAACAGAGCCGATGTTGCA 59.126 50.000 0.11 0.00 39.91 4.08
169 170 0.169009 GGAAACAGAGCCGATGTTGC 59.831 55.000 0.11 0.00 39.91 4.17
170 171 1.522668 TGGAAACAGAGCCGATGTTG 58.477 50.000 0.11 0.00 39.91 3.33
183 184 1.686052 TGTTGCAGAACCCATGGAAAC 59.314 47.619 15.22 3.51 29.33 2.78
184 185 2.079170 TGTTGCAGAACCCATGGAAA 57.921 45.000 15.22 0.00 29.33 3.13
185 186 2.079170 TTGTTGCAGAACCCATGGAA 57.921 45.000 15.22 0.00 0.00 3.53
186 187 1.894466 CATTGTTGCAGAACCCATGGA 59.106 47.619 15.22 0.00 0.00 3.41
187 188 1.894466 TCATTGTTGCAGAACCCATGG 59.106 47.619 4.14 4.14 0.00 3.66
188 189 2.559668 AGTCATTGTTGCAGAACCCATG 59.440 45.455 0.00 0.00 0.00 3.66
189 190 2.880443 AGTCATTGTTGCAGAACCCAT 58.120 42.857 0.00 0.00 0.00 4.00
190 191 2.363306 AGTCATTGTTGCAGAACCCA 57.637 45.000 0.00 0.00 0.00 4.51
191 192 3.383761 CAAAGTCATTGTTGCAGAACCC 58.616 45.455 0.00 0.00 34.16 4.11
202 203 7.092079 TCCTCATTATTGCAACAAAGTCATTG 58.908 34.615 0.00 0.00 44.95 2.82
203 204 7.230849 TCCTCATTATTGCAACAAAGTCATT 57.769 32.000 0.00 0.00 0.00 2.57
204 205 6.839124 TCCTCATTATTGCAACAAAGTCAT 57.161 33.333 0.00 0.00 0.00 3.06
205 206 6.433716 TCATCCTCATTATTGCAACAAAGTCA 59.566 34.615 0.00 0.00 0.00 3.41
206 207 6.855836 TCATCCTCATTATTGCAACAAAGTC 58.144 36.000 0.00 0.00 0.00 3.01
207 208 6.127535 CCTCATCCTCATTATTGCAACAAAGT 60.128 38.462 0.00 0.00 0.00 2.66
208 209 6.270815 CCTCATCCTCATTATTGCAACAAAG 58.729 40.000 0.00 0.00 0.00 2.77
209 210 5.127519 CCCTCATCCTCATTATTGCAACAAA 59.872 40.000 0.00 0.00 0.00 2.83
210 211 4.646040 CCCTCATCCTCATTATTGCAACAA 59.354 41.667 0.00 0.00 0.00 2.83
211 212 4.209538 CCCTCATCCTCATTATTGCAACA 58.790 43.478 0.00 0.00 0.00 3.33
212 213 4.037208 CACCCTCATCCTCATTATTGCAAC 59.963 45.833 0.00 0.00 0.00 4.17
213 214 4.209538 CACCCTCATCCTCATTATTGCAA 58.790 43.478 0.00 0.00 0.00 4.08
214 215 3.435457 CCACCCTCATCCTCATTATTGCA 60.435 47.826 0.00 0.00 0.00 4.08
215 216 3.152341 CCACCCTCATCCTCATTATTGC 58.848 50.000 0.00 0.00 0.00 3.56
216 217 3.759581 CCCACCCTCATCCTCATTATTG 58.240 50.000 0.00 0.00 0.00 1.90
217 218 2.108952 GCCCACCCTCATCCTCATTATT 59.891 50.000 0.00 0.00 0.00 1.40
218 219 1.707427 GCCCACCCTCATCCTCATTAT 59.293 52.381 0.00 0.00 0.00 1.28
219 220 1.140312 GCCCACCCTCATCCTCATTA 58.860 55.000 0.00 0.00 0.00 1.90
220 221 1.649271 GGCCCACCCTCATCCTCATT 61.649 60.000 0.00 0.00 0.00 2.57
221 222 2.081161 GGCCCACCCTCATCCTCAT 61.081 63.158 0.00 0.00 0.00 2.90
222 223 2.692368 GGCCCACCCTCATCCTCA 60.692 66.667 0.00 0.00 0.00 3.86
223 224 3.866582 CGGCCCACCCTCATCCTC 61.867 72.222 0.00 0.00 0.00 3.71
226 227 4.424711 TTGCGGCCCACCCTCATC 62.425 66.667 0.00 0.00 0.00 2.92
227 228 4.431131 CTTGCGGCCCACCCTCAT 62.431 66.667 0.00 0.00 0.00 2.90
229 230 2.666596 CTATCTTGCGGCCCACCCTC 62.667 65.000 0.00 0.00 0.00 4.30
230 231 2.690881 TATCTTGCGGCCCACCCT 60.691 61.111 0.00 0.00 0.00 4.34
231 232 2.203209 CTATCTTGCGGCCCACCC 60.203 66.667 0.00 0.00 0.00 4.61
232 233 1.523938 GTCTATCTTGCGGCCCACC 60.524 63.158 0.00 0.00 0.00 4.61
233 234 0.750850 TAGTCTATCTTGCGGCCCAC 59.249 55.000 0.00 0.00 0.00 4.61
234 235 1.040646 CTAGTCTATCTTGCGGCCCA 58.959 55.000 0.00 0.00 0.00 5.36
235 236 1.329256 TCTAGTCTATCTTGCGGCCC 58.671 55.000 0.00 0.00 0.00 5.80
236 237 2.823154 AGATCTAGTCTATCTTGCGGCC 59.177 50.000 0.00 0.00 34.69 6.13
237 238 4.513198 AAGATCTAGTCTATCTTGCGGC 57.487 45.455 0.00 0.00 41.13 6.53
238 239 5.391097 CGGTAAGATCTAGTCTATCTTGCGG 60.391 48.000 13.01 11.98 43.15 5.69
239 240 5.179742 ACGGTAAGATCTAGTCTATCTTGCG 59.820 44.000 13.01 10.71 43.15 4.85
240 241 6.563222 ACGGTAAGATCTAGTCTATCTTGC 57.437 41.667 13.01 11.70 42.30 4.01
241 242 7.932335 ACAACGGTAAGATCTAGTCTATCTTG 58.068 38.462 13.01 2.71 42.30 3.02
242 243 8.407064 CAACAACGGTAAGATCTAGTCTATCTT 58.593 37.037 9.42 9.42 44.07 2.40
243 244 7.774157 TCAACAACGGTAAGATCTAGTCTATCT 59.226 37.037 0.00 0.00 35.67 1.98
244 245 7.928103 TCAACAACGGTAAGATCTAGTCTATC 58.072 38.462 0.00 0.00 35.67 2.08
245 246 7.013464 CCTCAACAACGGTAAGATCTAGTCTAT 59.987 40.741 0.00 0.00 35.67 1.98
246 247 6.318144 CCTCAACAACGGTAAGATCTAGTCTA 59.682 42.308 0.00 0.00 35.67 2.59
247 248 5.125739 CCTCAACAACGGTAAGATCTAGTCT 59.874 44.000 0.00 0.00 39.43 3.24
248 249 5.105837 ACCTCAACAACGGTAAGATCTAGTC 60.106 44.000 0.00 0.00 0.00 2.59
249 250 4.771054 ACCTCAACAACGGTAAGATCTAGT 59.229 41.667 0.00 0.00 0.00 2.57
250 251 5.103000 CACCTCAACAACGGTAAGATCTAG 58.897 45.833 0.00 0.00 30.91 2.43
251 252 4.081862 CCACCTCAACAACGGTAAGATCTA 60.082 45.833 0.00 0.00 30.91 1.98
252 253 3.306780 CCACCTCAACAACGGTAAGATCT 60.307 47.826 0.00 0.00 30.91 2.75
253 254 3.000727 CCACCTCAACAACGGTAAGATC 58.999 50.000 0.00 0.00 30.91 2.75
254 255 2.370849 ACCACCTCAACAACGGTAAGAT 59.629 45.455 0.00 0.00 30.91 2.40
255 256 1.764134 ACCACCTCAACAACGGTAAGA 59.236 47.619 0.00 0.00 30.91 2.10
256 257 1.871039 CACCACCTCAACAACGGTAAG 59.129 52.381 0.00 0.00 30.91 2.34
257 258 1.475392 CCACCACCTCAACAACGGTAA 60.475 52.381 0.00 0.00 30.91 2.85
258 259 0.107081 CCACCACCTCAACAACGGTA 59.893 55.000 0.00 0.00 30.91 4.02
259 260 1.153046 CCACCACCTCAACAACGGT 60.153 57.895 0.00 0.00 0.00 4.83
260 261 0.250727 ATCCACCACCTCAACAACGG 60.251 55.000 0.00 0.00 0.00 4.44
261 262 1.156736 GATCCACCACCTCAACAACG 58.843 55.000 0.00 0.00 0.00 4.10
262 263 2.568623 AGATCCACCACCTCAACAAC 57.431 50.000 0.00 0.00 0.00 3.32
263 264 3.593442 AAAGATCCACCACCTCAACAA 57.407 42.857 0.00 0.00 0.00 2.83
264 265 3.117701 TGAAAAGATCCACCACCTCAACA 60.118 43.478 0.00 0.00 0.00 3.33
265 266 3.486383 TGAAAAGATCCACCACCTCAAC 58.514 45.455 0.00 0.00 0.00 3.18
266 267 3.394274 TCTGAAAAGATCCACCACCTCAA 59.606 43.478 0.00 0.00 0.00 3.02
267 268 2.978978 TCTGAAAAGATCCACCACCTCA 59.021 45.455 0.00 0.00 0.00 3.86
268 269 3.703001 TCTGAAAAGATCCACCACCTC 57.297 47.619 0.00 0.00 0.00 3.85
269 270 4.664688 AATCTGAAAAGATCCACCACCT 57.335 40.909 0.00 0.00 0.00 4.00
270 271 5.532779 GGATAATCTGAAAAGATCCACCACC 59.467 44.000 0.00 0.00 36.79 4.61
271 272 5.237344 CGGATAATCTGAAAAGATCCACCAC 59.763 44.000 0.00 0.00 36.63 4.16
272 273 5.104527 ACGGATAATCTGAAAAGATCCACCA 60.105 40.000 0.00 0.00 36.63 4.17
273 274 5.368989 ACGGATAATCTGAAAAGATCCACC 58.631 41.667 0.00 0.00 36.63 4.61
274 275 5.175856 CGACGGATAATCTGAAAAGATCCAC 59.824 44.000 0.00 0.00 36.63 4.02
275 276 5.289595 CGACGGATAATCTGAAAAGATCCA 58.710 41.667 0.00 0.00 36.63 3.41
276 277 4.686554 CCGACGGATAATCTGAAAAGATCC 59.313 45.833 8.64 0.00 33.99 3.36
277 278 5.290386 ACCGACGGATAATCTGAAAAGATC 58.710 41.667 23.38 0.00 0.00 2.75
278 279 5.277857 ACCGACGGATAATCTGAAAAGAT 57.722 39.130 23.38 0.00 0.00 2.40
279 280 4.730949 ACCGACGGATAATCTGAAAAGA 57.269 40.909 23.38 0.00 0.00 2.52
280 281 5.828747 TCTACCGACGGATAATCTGAAAAG 58.171 41.667 23.38 0.64 0.00 2.27
281 282 5.840243 TCTACCGACGGATAATCTGAAAA 57.160 39.130 23.38 0.00 0.00 2.29
282 283 5.769367 CATCTACCGACGGATAATCTGAAA 58.231 41.667 23.38 0.00 0.00 2.69
283 284 4.321008 GCATCTACCGACGGATAATCTGAA 60.321 45.833 23.38 0.00 0.00 3.02
284 285 3.190744 GCATCTACCGACGGATAATCTGA 59.809 47.826 23.38 7.65 0.00 3.27
285 286 3.502920 GCATCTACCGACGGATAATCTG 58.497 50.000 23.38 10.73 0.00 2.90
286 287 2.161808 CGCATCTACCGACGGATAATCT 59.838 50.000 23.38 0.00 0.00 2.40
287 288 2.095364 ACGCATCTACCGACGGATAATC 60.095 50.000 23.38 3.92 0.00 1.75
288 289 1.884579 ACGCATCTACCGACGGATAAT 59.115 47.619 23.38 7.35 0.00 1.28
289 290 1.311859 ACGCATCTACCGACGGATAA 58.688 50.000 23.38 5.03 0.00 1.75
290 291 2.071540 CTACGCATCTACCGACGGATA 58.928 52.381 23.38 8.39 0.00 2.59
291 292 0.873054 CTACGCATCTACCGACGGAT 59.127 55.000 23.38 7.58 0.00 4.18
292 293 1.779025 GCTACGCATCTACCGACGGA 61.779 60.000 23.38 3.17 0.00 4.69
293 294 1.370172 GCTACGCATCTACCGACGG 60.370 63.158 13.61 13.61 0.00 4.79
294 295 1.721476 CGCTACGCATCTACCGACG 60.721 63.158 0.00 0.00 0.00 5.12
295 296 4.207203 CGCTACGCATCTACCGAC 57.793 61.111 0.00 0.00 0.00 4.79
306 307 2.202932 ATCAAGGGCAGCGCTACG 60.203 61.111 10.99 7.42 0.00 3.51
307 308 0.533755 ATCATCAAGGGCAGCGCTAC 60.534 55.000 10.99 3.45 0.00 3.58
308 309 0.181114 AATCATCAAGGGCAGCGCTA 59.819 50.000 10.99 0.00 0.00 4.26
309 310 0.682209 AAATCATCAAGGGCAGCGCT 60.682 50.000 2.64 2.64 0.00 5.92
310 311 0.526954 CAAATCATCAAGGGCAGCGC 60.527 55.000 0.00 0.00 0.00 5.92
311 312 0.526954 GCAAATCATCAAGGGCAGCG 60.527 55.000 0.00 0.00 0.00 5.18
312 313 0.179092 GGCAAATCATCAAGGGCAGC 60.179 55.000 0.00 0.00 0.00 5.25
313 314 1.407979 GAGGCAAATCATCAAGGGCAG 59.592 52.381 0.00 0.00 0.00 4.85
314 315 1.272592 TGAGGCAAATCATCAAGGGCA 60.273 47.619 0.00 0.00 31.85 5.36
315 316 1.407979 CTGAGGCAAATCATCAAGGGC 59.592 52.381 0.00 0.00 34.81 5.19
316 317 2.029623 CCTGAGGCAAATCATCAAGGG 58.970 52.381 0.00 0.00 34.81 3.95
330 331 3.960102 TGCCCATTAAAATAAGCCTGAGG 59.040 43.478 0.00 0.00 0.00 3.86
331 332 4.889409 TCTGCCCATTAAAATAAGCCTGAG 59.111 41.667 0.00 0.00 0.00 3.35
332 333 4.644685 GTCTGCCCATTAAAATAAGCCTGA 59.355 41.667 0.00 0.00 0.00 3.86
333 334 4.202151 GGTCTGCCCATTAAAATAAGCCTG 60.202 45.833 0.00 0.00 0.00 4.85
334 335 3.960755 GGTCTGCCCATTAAAATAAGCCT 59.039 43.478 0.00 0.00 0.00 4.58
335 336 4.322080 GGTCTGCCCATTAAAATAAGCC 57.678 45.455 0.00 0.00 0.00 4.35
349 350 0.034059 CATGACGGATAGGGTCTGCC 59.966 60.000 0.00 0.00 36.64 4.85
350 351 0.601311 GCATGACGGATAGGGTCTGC 60.601 60.000 0.00 0.00 36.64 4.26
351 352 1.043816 AGCATGACGGATAGGGTCTG 58.956 55.000 0.00 0.00 39.25 3.51
352 353 1.794714 AAGCATGACGGATAGGGTCT 58.205 50.000 0.00 0.00 35.45 3.85
353 354 3.746045 TTAAGCATGACGGATAGGGTC 57.254 47.619 0.00 0.00 34.99 4.46
354 355 3.454812 ACTTTAAGCATGACGGATAGGGT 59.545 43.478 0.00 0.00 0.00 4.34
358 359 7.778083 TCTTCTAACTTTAAGCATGACGGATA 58.222 34.615 0.00 0.00 0.00 2.59
369 370 6.264518 TGCCCCACTTTTCTTCTAACTTTAAG 59.735 38.462 0.00 0.00 0.00 1.85
382 383 3.157087 TGAATCTCTTGCCCCACTTTTC 58.843 45.455 0.00 0.00 0.00 2.29
387 388 3.766051 AGAAATTGAATCTCTTGCCCCAC 59.234 43.478 0.00 0.00 0.00 4.61
390 392 3.194116 TGCAGAAATTGAATCTCTTGCCC 59.806 43.478 0.00 0.00 0.00 5.36
396 398 3.022406 AGGCCTGCAGAAATTGAATCTC 58.978 45.455 17.39 0.00 0.00 2.75
401 403 2.436417 GTGTAGGCCTGCAGAAATTGA 58.564 47.619 25.22 0.00 0.00 2.57
410 412 2.813908 CGTTCGGTGTAGGCCTGC 60.814 66.667 17.99 16.33 0.00 4.85
464 466 1.930817 GCATGTGGTATACTCTCGCGG 60.931 57.143 6.13 0.00 0.00 6.46
511 513 1.661178 GCACTTGTCATCAACGTGCAG 60.661 52.381 19.57 0.00 45.83 4.41
519 521 5.195185 ACATTATCCATGCACTTGTCATCA 58.805 37.500 0.00 0.00 36.14 3.07
525 527 4.787563 GCTCGAACATTATCCATGCACTTG 60.788 45.833 0.00 0.00 36.14 3.16
533 535 1.472552 CCGTGGCTCGAACATTATCCA 60.473 52.381 10.96 0.00 42.86 3.41
545 548 0.611714 TTCCTAGTTTCCCGTGGCTC 59.388 55.000 0.00 0.00 0.00 4.70
552 555 2.877043 TACGCGATTCCTAGTTTCCC 57.123 50.000 15.93 0.00 0.00 3.97
609 618 2.176273 GCTAGTGCACGCCAGGATG 61.176 63.158 12.01 0.00 39.41 3.51
610 619 2.187946 GCTAGTGCACGCCAGGAT 59.812 61.111 12.01 0.00 39.41 3.24
611 620 2.997315 AGCTAGTGCACGCCAGGA 60.997 61.111 12.01 0.00 42.74 3.86
612 621 2.816958 CAGCTAGTGCACGCCAGG 60.817 66.667 12.01 2.39 42.74 4.45
613 622 2.786539 TTCCAGCTAGTGCACGCCAG 62.787 60.000 12.01 11.19 42.74 4.85
614 623 2.390306 TTTCCAGCTAGTGCACGCCA 62.390 55.000 12.01 0.00 42.74 5.69
615 624 1.234615 TTTTCCAGCTAGTGCACGCC 61.235 55.000 12.01 3.70 42.74 5.68
616 625 0.804989 ATTTTCCAGCTAGTGCACGC 59.195 50.000 12.01 10.06 42.74 5.34
617 626 2.076100 TGATTTTCCAGCTAGTGCACG 58.924 47.619 12.01 0.00 42.74 5.34
618 627 3.691118 TGATGATTTTCCAGCTAGTGCAC 59.309 43.478 9.40 9.40 42.74 4.57
619 628 3.954200 TGATGATTTTCCAGCTAGTGCA 58.046 40.909 0.00 0.00 42.74 4.57
620 629 4.732938 GCTTGATGATTTTCCAGCTAGTGC 60.733 45.833 0.00 0.00 32.97 4.40
621 630 4.397103 TGCTTGATGATTTTCCAGCTAGTG 59.603 41.667 0.00 0.00 35.86 2.74
622 631 4.592942 TGCTTGATGATTTTCCAGCTAGT 58.407 39.130 0.00 0.00 35.86 2.57
623 632 4.639310 ACTGCTTGATGATTTTCCAGCTAG 59.361 41.667 0.00 0.00 35.86 3.42
624 633 4.592942 ACTGCTTGATGATTTTCCAGCTA 58.407 39.130 0.00 0.00 35.86 3.32
625 634 3.428532 ACTGCTTGATGATTTTCCAGCT 58.571 40.909 0.00 0.00 35.86 4.24
626 635 3.863142 ACTGCTTGATGATTTTCCAGC 57.137 42.857 0.00 0.00 35.52 4.85
627 636 5.392380 GGTGTACTGCTTGATGATTTTCCAG 60.392 44.000 0.00 0.00 0.00 3.86
628 637 4.458989 GGTGTACTGCTTGATGATTTTCCA 59.541 41.667 0.00 0.00 0.00 3.53
629 638 4.458989 TGGTGTACTGCTTGATGATTTTCC 59.541 41.667 0.00 0.00 0.00 3.13
630 639 5.048782 TGTGGTGTACTGCTTGATGATTTTC 60.049 40.000 0.00 0.00 0.00 2.29
631 640 4.826733 TGTGGTGTACTGCTTGATGATTTT 59.173 37.500 0.00 0.00 0.00 1.82
632 641 4.397420 TGTGGTGTACTGCTTGATGATTT 58.603 39.130 0.00 0.00 0.00 2.17
633 642 4.019792 TGTGGTGTACTGCTTGATGATT 57.980 40.909 0.00 0.00 0.00 2.57
634 643 3.701205 TGTGGTGTACTGCTTGATGAT 57.299 42.857 0.00 0.00 0.00 2.45
635 644 3.483808 TTGTGGTGTACTGCTTGATGA 57.516 42.857 0.00 0.00 0.00 2.92
636 645 3.606846 CGTTTGTGGTGTACTGCTTGATG 60.607 47.826 0.00 0.00 0.00 3.07
637 646 2.548057 CGTTTGTGGTGTACTGCTTGAT 59.452 45.455 0.00 0.00 0.00 2.57
638 647 1.937223 CGTTTGTGGTGTACTGCTTGA 59.063 47.619 0.00 0.00 0.00 3.02
639 648 1.668751 ACGTTTGTGGTGTACTGCTTG 59.331 47.619 0.00 0.00 0.00 4.01
640 649 2.032680 ACGTTTGTGGTGTACTGCTT 57.967 45.000 0.00 0.00 0.00 3.91
641 650 2.032680 AACGTTTGTGGTGTACTGCT 57.967 45.000 0.00 0.00 0.00 4.24
642 651 4.092383 CCTATAACGTTTGTGGTGTACTGC 59.908 45.833 5.91 0.00 0.00 4.40
643 652 4.628333 CCCTATAACGTTTGTGGTGTACTG 59.372 45.833 5.91 0.00 0.00 2.74
644 653 4.527816 TCCCTATAACGTTTGTGGTGTACT 59.472 41.667 5.91 0.00 0.00 2.73
645 654 4.819769 TCCCTATAACGTTTGTGGTGTAC 58.180 43.478 5.91 0.00 0.00 2.90
646 655 5.663456 GATCCCTATAACGTTTGTGGTGTA 58.337 41.667 5.91 0.00 0.00 2.90
647 656 4.510571 GATCCCTATAACGTTTGTGGTGT 58.489 43.478 5.91 0.00 0.00 4.16
648 657 3.554324 CGATCCCTATAACGTTTGTGGTG 59.446 47.826 5.91 1.44 0.00 4.17
649 658 3.788937 CGATCCCTATAACGTTTGTGGT 58.211 45.455 5.91 0.00 0.00 4.16
650 659 2.542595 GCGATCCCTATAACGTTTGTGG 59.457 50.000 5.91 6.14 0.00 4.17
651 660 3.191669 TGCGATCCCTATAACGTTTGTG 58.808 45.455 5.91 0.00 0.00 3.33
652 661 3.530265 TGCGATCCCTATAACGTTTGT 57.470 42.857 5.91 0.00 0.00 2.83
653 662 5.107220 GGTAATGCGATCCCTATAACGTTTG 60.107 44.000 5.91 0.00 0.00 2.93
654 663 4.992951 GGTAATGCGATCCCTATAACGTTT 59.007 41.667 5.91 0.00 0.00 3.60
655 664 4.563061 GGTAATGCGATCCCTATAACGTT 58.437 43.478 5.88 5.88 0.00 3.99
656 665 3.366679 CGGTAATGCGATCCCTATAACGT 60.367 47.826 0.00 0.00 0.00 3.99
657 666 3.176708 CGGTAATGCGATCCCTATAACG 58.823 50.000 0.00 0.00 0.00 3.18
658 667 2.928116 GCGGTAATGCGATCCCTATAAC 59.072 50.000 0.00 0.00 0.00 1.89
659 668 3.241067 GCGGTAATGCGATCCCTATAA 57.759 47.619 0.00 0.00 0.00 0.98
660 669 2.953466 GCGGTAATGCGATCCCTATA 57.047 50.000 0.00 0.00 0.00 1.31
661 670 3.834732 GCGGTAATGCGATCCCTAT 57.165 52.632 0.00 0.00 0.00 2.57
687 696 8.252417 TGGAAATCAATTTGGATGTAACAGATG 58.748 33.333 0.00 0.00 0.00 2.90
690 699 8.830201 TTTGGAAATCAATTTGGATGTAACAG 57.170 30.769 0.00 0.00 34.98 3.16
692 701 9.218440 ACATTTGGAAATCAATTTGGATGTAAC 57.782 29.630 0.00 0.00 34.98 2.50
698 707 8.728833 GCATTTACATTTGGAAATCAATTTGGA 58.271 29.630 0.00 0.00 34.98 3.53
699 708 8.512956 TGCATTTACATTTGGAAATCAATTTGG 58.487 29.630 0.00 0.00 34.98 3.28
700 709 9.549509 CTGCATTTACATTTGGAAATCAATTTG 57.450 29.630 0.00 0.00 34.98 2.32
702 711 9.504708 TTCTGCATTTACATTTGGAAATCAATT 57.495 25.926 0.00 0.00 34.98 2.32
703 712 9.675464 ATTCTGCATTTACATTTGGAAATCAAT 57.325 25.926 0.00 0.00 34.98 2.57
704 713 9.153721 GATTCTGCATTTACATTTGGAAATCAA 57.846 29.630 0.00 0.00 0.00 2.57
705 714 8.533657 AGATTCTGCATTTACATTTGGAAATCA 58.466 29.630 0.00 0.63 0.00 2.57
706 715 8.937634 AGATTCTGCATTTACATTTGGAAATC 57.062 30.769 0.00 0.00 0.00 2.17
707 716 9.807649 GTAGATTCTGCATTTACATTTGGAAAT 57.192 29.630 0.00 0.00 0.00 2.17
713 722 7.307396 CGATCCGTAGATTCTGCATTTACATTT 60.307 37.037 2.63 0.00 30.90 2.32
889 907 3.757248 AACGGATGGATCAGCGGCC 62.757 63.158 0.00 0.00 0.00 6.13
908 926 1.890510 GGGCGGTATTTGTAGGCGG 60.891 63.158 0.00 0.00 0.00 6.13
932 950 4.947147 GTGGTGAAGGGCCGTGCA 62.947 66.667 0.61 0.61 0.00 4.57
974 992 1.396690 CCGTGTCGATCGTGTTTGTTG 60.397 52.381 15.94 0.00 0.00 3.33
1125 1143 2.531685 TACCAGGTGGCCTTGGCT 60.532 61.111 17.89 10.07 39.32 4.75
1182 1200 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
1183 1201 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
1185 1203 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
1187 1205 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
1188 1206 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
1189 1207 8.020819 TCATTTTGATGACAAGTATTTTCGGAC 58.979 33.333 0.00 0.00 37.32 4.79
1190 1208 8.105097 TCATTTTGATGACAAGTATTTTCGGA 57.895 30.769 0.00 0.00 37.32 4.55
1191 1209 8.638565 GTTCATTTTGATGACAAGTATTTTCGG 58.361 33.333 0.00 0.00 37.32 4.30
1267 1285 9.801873 CCGGAAATACTTGTCATCAAAATAAAT 57.198 29.630 0.00 0.00 32.87 1.40
1268 1286 9.015367 TCCGGAAATACTTGTCATCAAAATAAA 57.985 29.630 0.00 0.00 32.87 1.40
1269 1287 8.455682 GTCCGGAAATACTTGTCATCAAAATAA 58.544 33.333 5.23 0.00 32.87 1.40
1270 1288 7.201574 CGTCCGGAAATACTTGTCATCAAAATA 60.202 37.037 5.23 0.00 32.87 1.40
1271 1289 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
1272 1290 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
1273 1291 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
1274 1292 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
1275 1293 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
1276 1294 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
1277 1295 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
1278 1296 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
1279 1297 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
1280 1298 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
1281 1299 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
1282 1300 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
1283 1301 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
1284 1302 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
1285 1303 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
1286 1304 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
1287 1305 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
1288 1306 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
1289 1307 2.273449 GTACTCCCTCCGTCCGGA 59.727 66.667 0.00 0.00 42.90 5.14
1290 1308 3.207669 CGTACTCCCTCCGTCCGG 61.208 72.222 0.00 0.00 0.00 5.14
1291 1309 2.437359 ACGTACTCCCTCCGTCCG 60.437 66.667 0.00 0.00 0.00 4.79
1292 1310 2.467826 CGACGTACTCCCTCCGTCC 61.468 68.421 5.91 0.00 46.03 4.79
1293 1311 0.460284 TACGACGTACTCCCTCCGTC 60.460 60.000 2.97 0.00 45.49 4.79
1294 1312 0.179000 ATACGACGTACTCCCTCCGT 59.821 55.000 10.41 0.00 37.56 4.69
1295 1313 0.585357 CATACGACGTACTCCCTCCG 59.415 60.000 10.41 0.00 0.00 4.63
1296 1314 1.959042 TCATACGACGTACTCCCTCC 58.041 55.000 10.41 0.00 0.00 4.30
1297 1315 2.483491 GGATCATACGACGTACTCCCTC 59.517 54.545 10.41 3.51 0.00 4.30
1298 1316 2.158711 TGGATCATACGACGTACTCCCT 60.159 50.000 21.31 2.37 0.00 4.20
1299 1317 2.224606 TGGATCATACGACGTACTCCC 58.775 52.381 21.31 15.67 0.00 4.30
1300 1318 4.500603 AATGGATCATACGACGTACTCC 57.499 45.455 10.41 16.00 0.00 3.85
1301 1319 5.279384 ACAAATGGATCATACGACGTACTC 58.721 41.667 10.41 7.58 0.00 2.59
1302 1320 5.258456 ACAAATGGATCATACGACGTACT 57.742 39.130 10.41 0.00 0.00 2.73
1303 1321 6.204359 AGTACAAATGGATCATACGACGTAC 58.796 40.000 10.41 0.00 0.00 3.67
1304 1322 6.381481 AGTACAAATGGATCATACGACGTA 57.619 37.500 10.62 10.62 0.00 3.57
1305 1323 5.258456 AGTACAAATGGATCATACGACGT 57.742 39.130 5.52 5.52 0.00 4.34
1306 1324 6.203647 TGTAGTACAAATGGATCATACGACG 58.796 40.000 0.00 0.00 0.00 5.12
1307 1325 8.589335 AATGTAGTACAAATGGATCATACGAC 57.411 34.615 7.16 0.00 0.00 4.34
1308 1326 7.870954 GGAATGTAGTACAAATGGATCATACGA 59.129 37.037 7.16 0.00 0.00 3.43
1309 1327 7.655732 TGGAATGTAGTACAAATGGATCATACG 59.344 37.037 7.16 0.00 0.00 3.06
1310 1328 8.902540 TGGAATGTAGTACAAATGGATCATAC 57.097 34.615 7.16 0.00 0.00 2.39
1312 1330 9.425248 AAATGGAATGTAGTACAAATGGATCAT 57.575 29.630 7.16 2.70 0.00 2.45
1313 1331 8.821686 AAATGGAATGTAGTACAAATGGATCA 57.178 30.769 7.16 0.51 0.00 2.92
1314 1332 9.736023 GAAAATGGAATGTAGTACAAATGGATC 57.264 33.333 7.16 0.00 0.00 3.36
1315 1333 9.479549 AGAAAATGGAATGTAGTACAAATGGAT 57.520 29.630 7.16 0.00 0.00 3.41
1316 1334 8.877864 AGAAAATGGAATGTAGTACAAATGGA 57.122 30.769 7.16 0.00 0.00 3.41
1317 1335 9.357652 CAAGAAAATGGAATGTAGTACAAATGG 57.642 33.333 7.16 0.00 0.00 3.16
1318 1336 9.357652 CCAAGAAAATGGAATGTAGTACAAATG 57.642 33.333 7.16 0.00 43.54 2.32
1319 1337 9.308000 TCCAAGAAAATGGAATGTAGTACAAAT 57.692 29.630 7.16 0.00 46.36 2.32
1320 1338 8.698973 TCCAAGAAAATGGAATGTAGTACAAA 57.301 30.769 7.16 0.00 46.36 2.83
1356 1374 2.332063 ATACCCACCGAGCAAGATTG 57.668 50.000 0.00 0.00 0.00 2.67
1357 1375 3.039011 AGTATACCCACCGAGCAAGATT 58.961 45.455 0.00 0.00 0.00 2.40
1358 1376 2.679082 AGTATACCCACCGAGCAAGAT 58.321 47.619 0.00 0.00 0.00 2.40
1359 1377 2.154567 AGTATACCCACCGAGCAAGA 57.845 50.000 0.00 0.00 0.00 3.02
1365 1383 5.957132 ACTATTCCTAAGTATACCCACCGA 58.043 41.667 0.00 0.00 0.00 4.69
1369 1387 5.510179 GCGCAACTATTCCTAAGTATACCCA 60.510 44.000 0.30 0.00 0.00 4.51
1371 1389 4.620184 CGCGCAACTATTCCTAAGTATACC 59.380 45.833 8.75 0.00 0.00 2.73
1372 1390 4.089636 GCGCGCAACTATTCCTAAGTATAC 59.910 45.833 29.10 0.00 0.00 1.47
1373 1391 4.232221 GCGCGCAACTATTCCTAAGTATA 58.768 43.478 29.10 0.00 0.00 1.47
1374 1392 3.057734 GCGCGCAACTATTCCTAAGTAT 58.942 45.455 29.10 0.00 0.00 2.12
1376 1394 1.287425 GCGCGCAACTATTCCTAAGT 58.713 50.000 29.10 0.00 0.00 2.24
1528 1552 2.095161 AGAAGATCTGAACGACGTGGAC 60.095 50.000 3.97 0.00 0.00 4.02
1540 1564 5.536260 TCAGCCGATCAAATAGAAGATCTG 58.464 41.667 0.00 0.00 38.75 2.90
1551 1581 1.351430 CGTTCGCTCAGCCGATCAAA 61.351 55.000 0.00 0.00 37.06 2.69
1580 1610 1.138036 CTGCGACCGATCCACGTAA 59.862 57.895 0.00 0.00 40.78 3.18
1766 1796 1.447489 CCTCCTGAACTGCAGCTCG 60.447 63.158 15.27 7.74 43.50 5.03
1802 1832 2.668632 GTGATCTTGGTGCCGGGA 59.331 61.111 2.18 0.00 0.00 5.14
1826 1856 1.671742 GTTGGAGCCCTTCTCGACA 59.328 57.895 0.00 0.00 42.82 4.35
1886 1916 4.050934 ATCTGCACGACGTCGCCA 62.051 61.111 35.92 29.27 44.43 5.69
2088 2118 4.810790 CTCTAGAACTGGACATTTGACGT 58.189 43.478 0.00 0.00 0.00 4.34
2458 2503 0.618458 TGTGAATCAGGTAGGGGTGC 59.382 55.000 0.00 0.00 0.00 5.01
2543 2592 6.348295 CGAGAGAGTACAAAGTAGTAGTTGCA 60.348 42.308 0.00 0.00 0.00 4.08
2567 2616 5.404946 TCTAAGACAAGTAATTCGGAACCG 58.595 41.667 6.94 6.94 41.35 4.44
2568 2617 7.845066 AATCTAAGACAAGTAATTCGGAACC 57.155 36.000 0.00 0.00 0.00 3.62
2600 2649 8.803235 TCATTTTAGTGCTAGATACATCCGTAT 58.197 33.333 0.00 0.00 41.16 3.06
2601 2650 8.173542 TCATTTTAGTGCTAGATACATCCGTA 57.826 34.615 0.00 0.00 0.00 4.02
2602 2651 7.050970 TCATTTTAGTGCTAGATACATCCGT 57.949 36.000 0.00 0.00 0.00 4.69
2603 2652 7.148641 ACTCATTTTAGTGCTAGATACATCCG 58.851 38.462 0.00 0.00 0.00 4.18
2604 2653 8.364142 AGACTCATTTTAGTGCTAGATACATCC 58.636 37.037 0.00 0.00 0.00 3.51
2607 2656 9.628500 TCTAGACTCATTTTAGTGCTAGATACA 57.372 33.333 0.00 0.00 34.69 2.29
2611 2660 9.628500 TGTATCTAGACTCATTTTAGTGCTAGA 57.372 33.333 0.00 0.00 38.76 2.43
2614 2663 9.142014 AGATGTATCTAGACTCATTTTAGTGCT 57.858 33.333 11.25 2.44 34.85 4.40
2615 2664 9.190858 CAGATGTATCTAGACTCATTTTAGTGC 57.809 37.037 11.25 0.69 34.85 4.40
2624 2673 9.713713 GTCTACATACAGATGTATCTAGACTCA 57.286 37.037 25.52 0.00 45.59 3.41
2631 2680 9.147732 TGGATTTGTCTACATACAGATGTATCT 57.852 33.333 2.47 0.00 45.42 1.98
2632 2681 9.764363 TTGGATTTGTCTACATACAGATGTATC 57.236 33.333 2.47 0.00 45.42 2.24
2633 2682 9.770097 CTTGGATTTGTCTACATACAGATGTAT 57.230 33.333 0.00 0.00 45.42 2.29
2634 2683 8.977412 TCTTGGATTTGTCTACATACAGATGTA 58.023 33.333 0.00 0.00 44.77 2.29
2636 2685 7.765819 TGTCTTGGATTTGTCTACATACAGATG 59.234 37.037 0.00 0.00 39.16 2.90
2637 2686 7.851228 TGTCTTGGATTTGTCTACATACAGAT 58.149 34.615 0.00 0.00 0.00 2.90
2638 2687 7.239763 TGTCTTGGATTTGTCTACATACAGA 57.760 36.000 0.00 0.00 0.00 3.41
2639 2688 7.604164 ACTTGTCTTGGATTTGTCTACATACAG 59.396 37.037 0.00 0.00 0.00 2.74
2640 2689 7.450074 ACTTGTCTTGGATTTGTCTACATACA 58.550 34.615 0.00 0.00 0.00 2.29
2641 2690 7.907214 ACTTGTCTTGGATTTGTCTACATAC 57.093 36.000 0.00 0.00 0.00 2.39
2643 2692 9.520515 AATTACTTGTCTTGGATTTGTCTACAT 57.479 29.630 0.00 0.00 0.00 2.29
2644 2693 8.918202 AATTACTTGTCTTGGATTTGTCTACA 57.082 30.769 0.00 0.00 0.00 2.74
2645 2694 8.169268 CGAATTACTTGTCTTGGATTTGTCTAC 58.831 37.037 0.00 0.00 0.00 2.59
2646 2695 7.333423 CCGAATTACTTGTCTTGGATTTGTCTA 59.667 37.037 0.00 0.00 0.00 2.59
2647 2696 6.149474 CCGAATTACTTGTCTTGGATTTGTCT 59.851 38.462 0.00 0.00 0.00 3.41
2648 2697 6.148811 TCCGAATTACTTGTCTTGGATTTGTC 59.851 38.462 0.00 0.00 0.00 3.18
2649 2698 6.001460 TCCGAATTACTTGTCTTGGATTTGT 58.999 36.000 0.00 0.00 0.00 2.83
2650 2699 6.494893 TCCGAATTACTTGTCTTGGATTTG 57.505 37.500 0.00 0.00 0.00 2.32
2651 2700 6.348213 CGTTCCGAATTACTTGTCTTGGATTT 60.348 38.462 0.00 0.00 0.00 2.17
2652 2701 5.121768 CGTTCCGAATTACTTGTCTTGGATT 59.878 40.000 0.00 0.00 0.00 3.01
2653 2702 4.630069 CGTTCCGAATTACTTGTCTTGGAT 59.370 41.667 0.00 0.00 0.00 3.41
2654 2703 3.991773 CGTTCCGAATTACTTGTCTTGGA 59.008 43.478 0.00 0.00 0.00 3.53
2655 2704 3.991773 TCGTTCCGAATTACTTGTCTTGG 59.008 43.478 0.00 0.00 31.06 3.61
2656 2705 4.091509 CCTCGTTCCGAATTACTTGTCTTG 59.908 45.833 0.00 0.00 34.74 3.02
2657 2706 4.243270 CCTCGTTCCGAATTACTTGTCTT 58.757 43.478 0.00 0.00 34.74 3.01
2658 2707 3.368116 CCCTCGTTCCGAATTACTTGTCT 60.368 47.826 0.00 0.00 34.74 3.41
2659 2708 2.928116 CCCTCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 34.74 3.18
2660 2709 2.564062 TCCCTCGTTCCGAATTACTTGT 59.436 45.455 0.00 0.00 34.74 3.16
2661 2710 3.187700 CTCCCTCGTTCCGAATTACTTG 58.812 50.000 0.00 0.00 34.74 3.16
2662 2711 2.830321 ACTCCCTCGTTCCGAATTACTT 59.170 45.455 0.00 0.00 34.74 2.24
2663 2712 2.454538 ACTCCCTCGTTCCGAATTACT 58.545 47.619 0.00 0.00 34.74 2.24
2664 2713 2.955477 ACTCCCTCGTTCCGAATTAC 57.045 50.000 0.00 0.00 34.74 1.89
2665 2714 2.360165 GCTACTCCCTCGTTCCGAATTA 59.640 50.000 0.00 0.00 34.74 1.40
2666 2715 1.136500 GCTACTCCCTCGTTCCGAATT 59.864 52.381 0.00 0.00 34.74 2.17
2667 2716 0.745468 GCTACTCCCTCGTTCCGAAT 59.255 55.000 0.00 0.00 34.74 3.34
2668 2717 0.323178 AGCTACTCCCTCGTTCCGAA 60.323 55.000 0.00 0.00 34.74 4.30
2669 2718 1.030488 CAGCTACTCCCTCGTTCCGA 61.030 60.000 0.00 0.00 0.00 4.55
2670 2719 1.313812 ACAGCTACTCCCTCGTTCCG 61.314 60.000 0.00 0.00 0.00 4.30
2671 2720 0.173708 CACAGCTACTCCCTCGTTCC 59.826 60.000 0.00 0.00 0.00 3.62
2672 2721 0.889306 ACACAGCTACTCCCTCGTTC 59.111 55.000 0.00 0.00 0.00 3.95
2673 2722 1.272769 GAACACAGCTACTCCCTCGTT 59.727 52.381 0.00 0.00 0.00 3.85
2674 2723 0.889306 GAACACAGCTACTCCCTCGT 59.111 55.000 0.00 0.00 0.00 4.18
2675 2724 0.179161 CGAACACAGCTACTCCCTCG 60.179 60.000 0.00 0.00 0.00 4.63
2676 2725 1.133407 CTCGAACACAGCTACTCCCTC 59.867 57.143 0.00 0.00 0.00 4.30
2677 2726 1.178276 CTCGAACACAGCTACTCCCT 58.822 55.000 0.00 0.00 0.00 4.20
2678 2727 0.173708 CCTCGAACACAGCTACTCCC 59.826 60.000 0.00 0.00 0.00 4.30
2679 2728 0.173708 CCCTCGAACACAGCTACTCC 59.826 60.000 0.00 0.00 0.00 3.85
2680 2729 1.174783 TCCCTCGAACACAGCTACTC 58.825 55.000 0.00 0.00 0.00 2.59
2681 2730 1.478510 CATCCCTCGAACACAGCTACT 59.521 52.381 0.00 0.00 0.00 2.57
2682 2731 1.204941 ACATCCCTCGAACACAGCTAC 59.795 52.381 0.00 0.00 0.00 3.58
2683 2732 1.476891 GACATCCCTCGAACACAGCTA 59.523 52.381 0.00 0.00 0.00 3.32
2684 2733 0.247736 GACATCCCTCGAACACAGCT 59.752 55.000 0.00 0.00 0.00 4.24
2694 2743 1.002624 TGTTTGCCGGACATCCCTC 60.003 57.895 5.05 0.00 0.00 4.30
2767 2976 9.043079 GGACGATGATATATAGTGAACGAGATA 57.957 37.037 0.00 0.00 0.00 1.98
2768 2977 7.553044 TGGACGATGATATATAGTGAACGAGAT 59.447 37.037 0.00 0.00 0.00 2.75
2769 2978 6.877322 TGGACGATGATATATAGTGAACGAGA 59.123 38.462 0.00 0.00 0.00 4.04
2774 2992 6.351033 GGGCTTGGACGATGATATATAGTGAA 60.351 42.308 0.00 0.00 0.00 3.18
2806 3024 1.341778 GGGGAAGAGGAGAGGACGTAA 60.342 57.143 0.00 0.00 0.00 3.18
2807 3025 0.258194 GGGGAAGAGGAGAGGACGTA 59.742 60.000 0.00 0.00 0.00 3.57
2808 3026 1.000612 GGGGAAGAGGAGAGGACGT 59.999 63.158 0.00 0.00 0.00 4.34
2809 3027 1.758906 GGGGGAAGAGGAGAGGACG 60.759 68.421 0.00 0.00 0.00 4.79
2810 3028 0.397957 GAGGGGGAAGAGGAGAGGAC 60.398 65.000 0.00 0.00 0.00 3.85
2811 3029 0.556380 AGAGGGGGAAGAGGAGAGGA 60.556 60.000 0.00 0.00 0.00 3.71
2812 3030 0.105709 GAGAGGGGGAAGAGGAGAGG 60.106 65.000 0.00 0.00 0.00 3.69
2813 3031 0.933700 AGAGAGGGGGAAGAGGAGAG 59.066 60.000 0.00 0.00 0.00 3.20
2846 3064 5.716703 GGGAAAAATCAGAGATGGAAGGAAA 59.283 40.000 0.00 0.00 0.00 3.13
2847 3065 5.222316 TGGGAAAAATCAGAGATGGAAGGAA 60.222 40.000 0.00 0.00 0.00 3.36
2848 3066 4.292041 TGGGAAAAATCAGAGATGGAAGGA 59.708 41.667 0.00 0.00 0.00 3.36
2964 3183 3.060339 GCTGGCAATTGAAAACACTTTCG 60.060 43.478 10.34 0.00 43.40 3.46
3068 3289 6.287589 TCCTTTTGTCTCTAGGATTGTCTC 57.712 41.667 0.00 0.00 33.23 3.36
3086 3307 4.858965 AGAAGAGCAATCTCCATCCTTT 57.141 40.909 0.00 0.00 40.22 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.