Multiple sequence alignment - TraesCS1B01G192200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G192200 chr1B 100.000 3677 0 0 1 3677 344000348 344004024 0.000000e+00 6791.0
1 TraesCS1B01G192200 chr1B 80.165 363 69 3 3060 3420 482481711 482481350 6.050000e-68 268.0
2 TraesCS1B01G192200 chr1A 91.430 3022 128 55 1 2941 343673372 343676343 0.000000e+00 4024.0
3 TraesCS1B01G192200 chr1D 95.376 1276 42 10 1683 2941 270231060 270232335 0.000000e+00 2013.0
4 TraesCS1B01G192200 chr1D 91.061 1018 36 16 656 1637 270230055 270231053 0.000000e+00 1325.0
5 TraesCS1B01G192200 chr1D 81.972 355 33 18 322 657 270229609 270229951 4.680000e-69 272.0
6 TraesCS1B01G192200 chr1D 88.889 171 8 8 96 257 270229410 270229578 2.240000e-47 200.0
7 TraesCS1B01G192200 chr1D 87.943 141 11 3 3496 3630 270232503 270232643 1.060000e-35 161.0
8 TraesCS1B01G192200 chr1D 95.833 72 3 0 40 111 270229321 270229392 2.320000e-22 117.0
9 TraesCS1B01G192200 chr3B 81.499 427 67 11 3050 3474 747473372 747472956 1.260000e-89 340.0
10 TraesCS1B01G192200 chr3B 80.974 431 64 12 3050 3478 744426225 744426639 3.540000e-85 326.0
11 TraesCS1B01G192200 chr3B 80.441 363 68 3 3060 3420 734139931 734139570 1.300000e-69 274.0
12 TraesCS1B01G192200 chr3B 80.328 366 69 3 3057 3420 772413489 772413853 1.300000e-69 274.0
13 TraesCS1B01G192200 chr3B 75.785 223 43 9 1765 1985 678548568 678548781 6.500000e-18 102.0
14 TraesCS1B01G192200 chr5B 80.441 363 68 3 3057 3417 547491871 547492232 1.300000e-69 274.0
15 TraesCS1B01G192200 chr5B 79.343 213 33 10 1767 1975 457134689 457134484 4.950000e-29 139.0
16 TraesCS1B01G192200 chr5B 84.615 78 8 4 1906 1981 535700252 535700327 1.420000e-09 75.0
17 TraesCS1B01G192200 chr2A 80.055 366 70 3 3055 3418 89175406 89175042 6.050000e-68 268.0
18 TraesCS1B01G192200 chr2A 80.055 366 70 3 3057 3420 425899241 425899605 6.050000e-68 268.0
19 TraesCS1B01G192200 chr2A 79.891 368 71 3 3055 3420 192003363 192002997 2.180000e-67 267.0
20 TraesCS1B01G192200 chr5A 79.812 213 32 10 1767 1975 481903720 481903515 1.060000e-30 145.0
21 TraesCS1B01G192200 chr5A 75.984 254 50 10 1732 1981 680843566 680843320 1.790000e-23 121.0
22 TraesCS1B01G192200 chr5D 78.873 213 34 9 1767 1975 381036627 381036422 2.300000e-27 134.0
23 TraesCS1B01G192200 chr4D 75.794 252 50 9 1734 1981 500023997 500023753 2.320000e-22 117.0
24 TraesCS1B01G192200 chr3D 76.682 223 41 9 1765 1985 515776707 515776920 3.000000e-21 113.0
25 TraesCS1B01G192200 chr3A 76.682 223 41 9 1765 1985 650056445 650056658 3.000000e-21 113.0
26 TraesCS1B01G192200 chr4B 87.234 94 12 0 1765 1858 103056202 103056109 1.400000e-19 108.0
27 TraesCS1B01G192200 chr2B 74.661 221 47 8 1764 1981 794867064 794866850 5.060000e-14 89.8
28 TraesCS1B01G192200 chr6A 82.075 106 13 5 1766 1868 599622018 599622120 6.540000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G192200 chr1B 344000348 344004024 3676 False 6791.000000 6791 100.000 1 3677 1 chr1B.!!$F1 3676
1 TraesCS1B01G192200 chr1A 343673372 343676343 2971 False 4024.000000 4024 91.430 1 2941 1 chr1A.!!$F1 2940
2 TraesCS1B01G192200 chr1D 270229321 270232643 3322 False 681.333333 2013 90.179 40 3630 6 chr1D.!!$F1 3590

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
997 1209 0.100325 TTCACACAAGCAAGCAACGG 59.900 50.0 0.00 0.0 0.0 4.44 F
1267 1485 0.095417 GTGCGAGCGAGTTGAATTCC 59.905 55.0 2.27 0.0 0.0 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2303 2556 0.026803 GCCGTCGATGAAGAATGTGC 59.973 55.0 6.11 0.0 0.00 4.57 R
2773 3037 0.035534 TACGACCCGTACACTGGCTA 60.036 55.0 0.00 0.0 41.54 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 60 3.849911 ACACGAGTATGAACACATGAGG 58.150 45.455 0.00 0.00 0.00 3.86
206 246 5.034152 CGGAATGAACCCATATTCAAAACG 58.966 41.667 0.00 0.00 41.78 3.60
278 326 2.111999 CTGCGTCCCAGGGTTCAGAA 62.112 60.000 5.01 0.00 37.93 3.02
279 327 1.072505 GCGTCCCAGGGTTCAGAAA 59.927 57.895 5.01 0.00 0.00 2.52
280 328 0.536460 GCGTCCCAGGGTTCAGAAAA 60.536 55.000 5.01 0.00 0.00 2.29
281 329 1.975660 CGTCCCAGGGTTCAGAAAAA 58.024 50.000 5.01 0.00 0.00 1.94
316 364 6.115446 AGAGGAAGAAATGAATAACGCATCA 58.885 36.000 0.00 0.00 0.00 3.07
325 373 7.443259 AATGAATAACGCATCATGATCATCA 57.557 32.000 4.86 0.00 36.44 3.07
337 390 1.681264 TGATCATCACCACGATACGCT 59.319 47.619 0.00 0.00 31.20 5.07
338 391 2.100749 TGATCATCACCACGATACGCTT 59.899 45.455 0.00 0.00 31.20 4.68
341 394 1.999735 CATCACCACGATACGCTTTGT 59.000 47.619 0.00 0.00 31.20 2.83
350 403 2.855963 CGATACGCTTTGTACACGGAAT 59.144 45.455 8.91 2.70 35.44 3.01
352 405 2.157834 ACGCTTTGTACACGGAATGA 57.842 45.000 8.91 0.00 0.00 2.57
354 407 2.222445 ACGCTTTGTACACGGAATGAAC 59.778 45.455 8.91 0.00 0.00 3.18
355 408 2.222213 CGCTTTGTACACGGAATGAACA 59.778 45.455 0.00 0.00 0.00 3.18
356 409 3.551551 GCTTTGTACACGGAATGAACAC 58.448 45.455 0.00 0.00 0.00 3.32
357 410 3.002862 GCTTTGTACACGGAATGAACACA 59.997 43.478 0.00 0.00 0.00 3.72
375 434 2.420722 CACACACGTTTGGTTAGTGGTT 59.579 45.455 6.66 0.00 39.95 3.67
516 579 2.344203 ACCTTCTCACCGCCTCTCG 61.344 63.158 0.00 0.00 38.08 4.04
609 688 0.106217 CTCCTCTCCCTCCTCCTCAC 60.106 65.000 0.00 0.00 0.00 3.51
812 1001 6.410157 CCATTCCTTCACCTGGATTCTAGATT 60.410 42.308 0.00 0.00 33.09 2.40
951 1159 3.556423 GGGTTACTGTTGGATCGAACTGT 60.556 47.826 27.31 27.31 40.11 3.55
997 1209 0.100325 TTCACACAAGCAAGCAACGG 59.900 50.000 0.00 0.00 0.00 4.44
1044 1256 1.843421 CTTCAGGTTCCACCCCACA 59.157 57.895 0.00 0.00 39.75 4.17
1128 1340 0.184211 TCATCCCCGTCATCGACCTA 59.816 55.000 0.00 0.00 39.71 3.08
1180 1396 7.117379 CAGGTACATACACATGCATCTTCTATG 59.883 40.741 0.00 2.70 35.39 2.23
1198 1414 8.982685 TCTTCTATGCGATTCATTCTGTATTTC 58.017 33.333 0.00 0.00 36.63 2.17
1199 1415 8.661352 TTCTATGCGATTCATTCTGTATTTCA 57.339 30.769 0.00 0.00 36.63 2.69
1200 1416 8.661352 TCTATGCGATTCATTCTGTATTTCAA 57.339 30.769 0.00 0.00 36.63 2.69
1201 1417 8.551205 TCTATGCGATTCATTCTGTATTTCAAC 58.449 33.333 0.00 0.00 36.63 3.18
1233 1449 4.005650 ACACATTCATTCATGCTTCGACT 58.994 39.130 0.00 0.00 0.00 4.18
1264 1482 0.599991 TGTGTGCGAGCGAGTTGAAT 60.600 50.000 0.00 0.00 0.00 2.57
1265 1483 0.512952 GTGTGCGAGCGAGTTGAATT 59.487 50.000 0.00 0.00 0.00 2.17
1266 1484 0.790207 TGTGCGAGCGAGTTGAATTC 59.210 50.000 0.00 0.00 0.00 2.17
1267 1485 0.095417 GTGCGAGCGAGTTGAATTCC 59.905 55.000 2.27 0.00 0.00 3.01
1268 1486 1.019278 TGCGAGCGAGTTGAATTCCC 61.019 55.000 2.27 0.00 0.00 3.97
1527 1749 4.803613 CCTTTTCCCAAAGAAACTTGTTCG 59.196 41.667 0.00 0.00 44.20 3.95
1573 1816 7.912250 CCTCTCAATTTTGGAATATTCTCAACG 59.088 37.037 14.95 6.76 0.00 4.10
1620 1867 6.375455 ACAGTTAATTCTGGCATAACCTTCTG 59.625 38.462 5.36 6.62 39.48 3.02
1637 1884 3.751479 TCTGTGCACTCAACTGTACAT 57.249 42.857 19.41 0.00 36.35 2.29
1639 1886 4.809673 TCTGTGCACTCAACTGTACATAG 58.190 43.478 19.41 1.89 36.35 2.23
1640 1887 3.325870 TGTGCACTCAACTGTACATAGC 58.674 45.455 19.41 0.00 32.50 2.97
1641 1888 3.006859 TGTGCACTCAACTGTACATAGCT 59.993 43.478 19.41 0.00 32.50 3.32
1642 1889 4.219725 TGTGCACTCAACTGTACATAGCTA 59.780 41.667 19.41 0.00 32.50 3.32
1643 1890 4.563184 GTGCACTCAACTGTACATAGCTAC 59.437 45.833 10.32 0.00 0.00 3.58
1644 1891 4.462834 TGCACTCAACTGTACATAGCTACT 59.537 41.667 0.00 0.00 0.00 2.57
1645 1892 5.650703 TGCACTCAACTGTACATAGCTACTA 59.349 40.000 0.00 0.00 0.00 1.82
1646 1893 5.972382 GCACTCAACTGTACATAGCTACTAC 59.028 44.000 0.00 0.00 0.00 2.73
1647 1894 6.183360 GCACTCAACTGTACATAGCTACTACT 60.183 42.308 0.00 0.00 0.00 2.57
1648 1895 7.628794 GCACTCAACTGTACATAGCTACTACTT 60.629 40.741 0.00 0.00 0.00 2.24
1649 1896 7.911205 CACTCAACTGTACATAGCTACTACTTC 59.089 40.741 0.00 0.00 0.00 3.01
1650 1897 7.830201 ACTCAACTGTACATAGCTACTACTTCT 59.170 37.037 0.00 0.00 0.00 2.85
1651 1898 9.327628 CTCAACTGTACATAGCTACTACTTCTA 57.672 37.037 0.00 0.00 0.00 2.10
1652 1899 9.676861 TCAACTGTACATAGCTACTACTTCTAA 57.323 33.333 0.00 0.00 0.00 2.10
1679 1926 8.671384 AAAAACATAGCTAGTTTGTACAGTGA 57.329 30.769 16.79 0.00 39.02 3.41
1711 1958 6.482641 TGAATGAGAATGCTAAGATTCAGAGC 59.517 38.462 0.00 3.53 35.16 4.09
2114 2361 2.439156 GGGCCACCAGCAGATGAC 60.439 66.667 4.39 0.00 46.50 3.06
2121 2368 0.773644 ACCAGCAGATGACCAAGGTT 59.226 50.000 0.00 0.00 0.00 3.50
2254 2507 1.000019 CTGTACGGAGGGGAGGTGA 60.000 63.158 0.00 0.00 0.00 4.02
2268 2521 2.272146 GTGATGTCCGGCATGGGT 59.728 61.111 14.84 0.00 38.06 4.51
2430 2683 3.946201 ACCTTGCCGCTCTGCACT 61.946 61.111 0.00 0.00 41.88 4.40
2446 2699 2.438021 TGCACTAACAACACCTTCTCCT 59.562 45.455 0.00 0.00 0.00 3.69
2472 2725 3.862124 GGTACGTGCACTGCTCTG 58.138 61.111 16.19 0.00 0.00 3.35
2502 2758 5.033589 AGCTCGATCAATTCTTGAATCCT 57.966 39.130 0.00 0.00 43.95 3.24
2682 2944 2.009681 TGGTGGTCTACTGAAGCTCA 57.990 50.000 0.00 0.00 0.00 4.26
2699 2961 4.660168 AGCTCAGATTTCACAACCAAGAT 58.340 39.130 0.00 0.00 0.00 2.40
2700 2962 4.699257 AGCTCAGATTTCACAACCAAGATC 59.301 41.667 0.00 0.00 0.00 2.75
2701 2963 4.436584 GCTCAGATTTCACAACCAAGATCG 60.437 45.833 0.00 0.00 0.00 3.69
2702 2964 4.641396 TCAGATTTCACAACCAAGATCGT 58.359 39.130 0.00 0.00 0.00 3.73
2703 2965 4.452114 TCAGATTTCACAACCAAGATCGTG 59.548 41.667 1.13 1.13 0.00 4.35
2773 3037 2.855660 GGCAACGGCGGTATATTTTT 57.144 45.000 13.24 0.00 42.47 1.94
2808 3076 4.222114 GGTCGTATACCGTATGTGTAAGC 58.778 47.826 0.98 0.00 38.88 3.09
2882 3163 5.178797 GCCTATTTTAGCACTGTCTTCTCA 58.821 41.667 0.00 0.00 0.00 3.27
2903 3184 1.069765 CTGTGGCACGACACTTCCT 59.930 57.895 13.77 0.00 41.84 3.36
2918 3203 5.602628 ACACTTCCTTCTCTTTACTGTGAC 58.397 41.667 0.00 0.00 0.00 3.67
2941 3226 3.013219 CAGTCTCTGTACTAGCTGCTGA 58.987 50.000 13.43 0.00 0.00 4.26
2990 3302 8.815912 GGATGTAAAATTCCCCATTGCTATTAT 58.184 33.333 0.00 0.00 0.00 1.28
2993 3305 9.647918 TGTAAAATTCCCCATTGCTATTATACA 57.352 29.630 0.00 0.00 0.00 2.29
3024 3374 4.682778 AATTCCCCATTGATTGATGCAG 57.317 40.909 0.00 0.00 0.00 4.41
3031 3381 3.284617 CATTGATTGATGCAGAGGGTCA 58.715 45.455 0.00 0.00 0.00 4.02
3037 3387 3.657398 TGATGCAGAGGGTCATGAATT 57.343 42.857 0.00 0.00 0.00 2.17
3038 3388 3.284617 TGATGCAGAGGGTCATGAATTG 58.715 45.455 0.00 0.00 0.00 2.32
3039 3389 2.885135 TGCAGAGGGTCATGAATTGT 57.115 45.000 0.00 0.00 0.00 2.71
3040 3390 3.159213 TGCAGAGGGTCATGAATTGTT 57.841 42.857 0.00 0.00 0.00 2.83
3041 3391 4.299586 TGCAGAGGGTCATGAATTGTTA 57.700 40.909 0.00 0.00 0.00 2.41
3043 3393 5.263599 TGCAGAGGGTCATGAATTGTTATT 58.736 37.500 0.00 0.00 0.00 1.40
3044 3394 5.716228 TGCAGAGGGTCATGAATTGTTATTT 59.284 36.000 0.00 0.00 0.00 1.40
3045 3395 6.211184 TGCAGAGGGTCATGAATTGTTATTTT 59.789 34.615 0.00 0.00 0.00 1.82
3046 3396 7.099120 GCAGAGGGTCATGAATTGTTATTTTT 58.901 34.615 0.00 0.00 0.00 1.94
3078 3428 9.739786 CGCAAGTTTTATTCATTTGAAATAACC 57.260 29.630 0.00 0.00 37.61 2.85
3096 3446 9.878599 GAAATAACCATTACATCATTTACGAGG 57.121 33.333 0.00 0.00 0.00 4.63
3097 3447 9.621629 AAATAACCATTACATCATTTACGAGGA 57.378 29.630 0.00 0.00 0.00 3.71
3098 3448 9.793259 AATAACCATTACATCATTTACGAGGAT 57.207 29.630 0.00 0.00 0.00 3.24
3099 3449 9.793259 ATAACCATTACATCATTTACGAGGATT 57.207 29.630 0.00 0.00 0.00 3.01
3100 3450 7.496529 ACCATTACATCATTTACGAGGATTG 57.503 36.000 0.00 0.00 0.00 2.67
3101 3451 6.486657 ACCATTACATCATTTACGAGGATTGG 59.513 38.462 0.00 0.00 0.00 3.16
3102 3452 6.486657 CCATTACATCATTTACGAGGATTGGT 59.513 38.462 0.00 0.00 0.00 3.67
3103 3453 7.659799 CCATTACATCATTTACGAGGATTGGTA 59.340 37.037 0.00 0.00 0.00 3.25
3104 3454 8.495949 CATTACATCATTTACGAGGATTGGTAC 58.504 37.037 0.00 0.00 0.00 3.34
3105 3455 5.047847 ACATCATTTACGAGGATTGGTACG 58.952 41.667 0.00 0.00 0.00 3.67
3106 3456 4.987408 TCATTTACGAGGATTGGTACGA 57.013 40.909 0.00 0.00 0.00 3.43
3107 3457 5.524971 TCATTTACGAGGATTGGTACGAT 57.475 39.130 0.00 0.00 0.00 3.73
3108 3458 5.909477 TCATTTACGAGGATTGGTACGATT 58.091 37.500 0.00 0.00 0.00 3.34
3109 3459 6.342906 TCATTTACGAGGATTGGTACGATTT 58.657 36.000 0.00 0.00 0.00 2.17
3110 3460 6.477688 TCATTTACGAGGATTGGTACGATTTC 59.522 38.462 0.00 0.00 0.00 2.17
3111 3461 3.880047 ACGAGGATTGGTACGATTTCA 57.120 42.857 0.00 0.00 0.00 2.69
3112 3462 4.402056 ACGAGGATTGGTACGATTTCAT 57.598 40.909 0.00 0.00 0.00 2.57
3113 3463 4.766375 ACGAGGATTGGTACGATTTCATT 58.234 39.130 0.00 0.00 0.00 2.57
3114 3464 5.183228 ACGAGGATTGGTACGATTTCATTT 58.817 37.500 0.00 0.00 0.00 2.32
3115 3465 6.342906 ACGAGGATTGGTACGATTTCATTTA 58.657 36.000 0.00 0.00 0.00 1.40
3116 3466 6.819649 ACGAGGATTGGTACGATTTCATTTAA 59.180 34.615 0.00 0.00 0.00 1.52
3117 3467 7.334921 ACGAGGATTGGTACGATTTCATTTAAA 59.665 33.333 0.00 0.00 0.00 1.52
3118 3468 7.850982 CGAGGATTGGTACGATTTCATTTAAAG 59.149 37.037 0.00 0.00 0.00 1.85
3119 3469 7.996385 AGGATTGGTACGATTTCATTTAAAGG 58.004 34.615 0.00 0.00 0.00 3.11
3120 3470 6.695713 GGATTGGTACGATTTCATTTAAAGGC 59.304 38.462 0.00 0.00 0.00 4.35
3121 3471 6.827586 TTGGTACGATTTCATTTAAAGGCT 57.172 33.333 0.00 0.00 0.00 4.58
3122 3472 6.431198 TGGTACGATTTCATTTAAAGGCTC 57.569 37.500 0.00 0.00 0.00 4.70
3123 3473 6.177610 TGGTACGATTTCATTTAAAGGCTCT 58.822 36.000 0.00 0.00 0.00 4.09
3124 3474 6.315393 TGGTACGATTTCATTTAAAGGCTCTC 59.685 38.462 0.00 0.00 0.00 3.20
3125 3475 6.315393 GGTACGATTTCATTTAAAGGCTCTCA 59.685 38.462 0.00 0.00 0.00 3.27
3126 3476 6.817765 ACGATTTCATTTAAAGGCTCTCAA 57.182 33.333 0.00 0.00 0.00 3.02
3127 3477 7.214467 ACGATTTCATTTAAAGGCTCTCAAA 57.786 32.000 0.00 0.00 0.00 2.69
3128 3478 7.084486 ACGATTTCATTTAAAGGCTCTCAAAC 58.916 34.615 0.00 0.00 0.00 2.93
3129 3479 6.528072 CGATTTCATTTAAAGGCTCTCAAACC 59.472 38.462 0.00 0.00 0.00 3.27
3130 3480 6.723298 TTTCATTTAAAGGCTCTCAAACCA 57.277 33.333 0.00 0.00 0.00 3.67
3131 3481 6.723298 TTCATTTAAAGGCTCTCAAACCAA 57.277 33.333 0.00 0.00 0.00 3.67
3132 3482 6.723298 TCATTTAAAGGCTCTCAAACCAAA 57.277 33.333 0.00 0.00 0.00 3.28
3133 3483 7.301868 TCATTTAAAGGCTCTCAAACCAAAT 57.698 32.000 0.00 0.00 0.00 2.32
3134 3484 8.415950 TCATTTAAAGGCTCTCAAACCAAATA 57.584 30.769 0.00 0.00 0.00 1.40
3135 3485 8.865090 TCATTTAAAGGCTCTCAAACCAAATAA 58.135 29.630 0.00 0.00 0.00 1.40
3136 3486 9.487790 CATTTAAAGGCTCTCAAACCAAATAAA 57.512 29.630 0.00 0.00 0.00 1.40
3138 3488 9.541143 TTTAAAGGCTCTCAAACCAAATAAAAG 57.459 29.630 0.00 0.00 0.00 2.27
3139 3489 6.731292 AAGGCTCTCAAACCAAATAAAAGT 57.269 33.333 0.00 0.00 0.00 2.66
3140 3490 6.731292 AGGCTCTCAAACCAAATAAAAGTT 57.269 33.333 0.00 0.00 0.00 2.66
3141 3491 7.833285 AGGCTCTCAAACCAAATAAAAGTTA 57.167 32.000 0.00 0.00 0.00 2.24
3142 3492 8.245195 AGGCTCTCAAACCAAATAAAAGTTAA 57.755 30.769 0.00 0.00 0.00 2.01
3143 3493 8.700973 AGGCTCTCAAACCAAATAAAAGTTAAA 58.299 29.630 0.00 0.00 0.00 1.52
3144 3494 8.978539 GGCTCTCAAACCAAATAAAAGTTAAAG 58.021 33.333 0.00 0.00 0.00 1.85
3145 3495 9.744468 GCTCTCAAACCAAATAAAAGTTAAAGA 57.256 29.630 0.00 0.00 0.00 2.52
3154 3504 9.841880 CCAAATAAAAGTTAAAGAGAACCTAGC 57.158 33.333 0.00 0.00 0.00 3.42
3155 3505 9.841880 CAAATAAAAGTTAAAGAGAACCTAGCC 57.158 33.333 0.00 0.00 0.00 3.93
3156 3506 9.582648 AAATAAAAGTTAAAGAGAACCTAGCCA 57.417 29.630 0.00 0.00 0.00 4.75
3157 3507 9.582648 AATAAAAGTTAAAGAGAACCTAGCCAA 57.417 29.630 0.00 0.00 0.00 4.52
3158 3508 6.879276 AAAGTTAAAGAGAACCTAGCCAAC 57.121 37.500 0.00 0.00 0.00 3.77
3159 3509 4.907809 AGTTAAAGAGAACCTAGCCAACC 58.092 43.478 0.00 0.00 0.00 3.77
3160 3510 4.597940 AGTTAAAGAGAACCTAGCCAACCT 59.402 41.667 0.00 0.00 0.00 3.50
3161 3511 5.783875 AGTTAAAGAGAACCTAGCCAACCTA 59.216 40.000 0.00 0.00 0.00 3.08
3162 3512 4.828072 AAAGAGAACCTAGCCAACCTAG 57.172 45.455 0.00 0.00 42.68 3.02
3163 3513 2.112190 AGAGAACCTAGCCAACCTAGC 58.888 52.381 0.00 0.00 41.87 3.42
3164 3514 1.831736 GAGAACCTAGCCAACCTAGCA 59.168 52.381 0.00 0.00 41.87 3.49
3165 3515 2.236395 GAGAACCTAGCCAACCTAGCAA 59.764 50.000 0.00 0.00 41.87 3.91
3166 3516 2.237392 AGAACCTAGCCAACCTAGCAAG 59.763 50.000 0.00 0.00 41.87 4.01
3167 3517 0.253327 ACCTAGCCAACCTAGCAAGC 59.747 55.000 0.00 0.00 41.87 4.01
3168 3518 0.543749 CCTAGCCAACCTAGCAAGCT 59.456 55.000 0.00 0.00 41.87 3.74
3169 3519 1.474143 CCTAGCCAACCTAGCAAGCTC 60.474 57.143 0.00 0.00 41.87 4.09
3170 3520 1.208052 CTAGCCAACCTAGCAAGCTCA 59.792 52.381 0.00 0.00 37.34 4.26
3171 3521 0.622665 AGCCAACCTAGCAAGCTCAT 59.377 50.000 0.00 0.00 0.00 2.90
3172 3522 0.737219 GCCAACCTAGCAAGCTCATG 59.263 55.000 0.00 0.00 0.00 3.07
3173 3523 1.679944 GCCAACCTAGCAAGCTCATGA 60.680 52.381 0.00 0.00 0.00 3.07
3174 3524 2.286872 CCAACCTAGCAAGCTCATGAG 58.713 52.381 18.84 18.84 0.00 2.90
3206 3556 5.973651 TTGCTTCTCTATTACAATGCTCG 57.026 39.130 0.00 0.00 0.00 5.03
3207 3557 5.262588 TGCTTCTCTATTACAATGCTCGA 57.737 39.130 0.00 0.00 0.00 4.04
3208 3558 5.660460 TGCTTCTCTATTACAATGCTCGAA 58.340 37.500 0.00 0.00 0.00 3.71
3209 3559 6.283694 TGCTTCTCTATTACAATGCTCGAAT 58.716 36.000 0.00 0.00 0.00 3.34
3210 3560 6.422100 TGCTTCTCTATTACAATGCTCGAATC 59.578 38.462 0.00 0.00 0.00 2.52
3211 3561 6.644592 GCTTCTCTATTACAATGCTCGAATCT 59.355 38.462 0.00 0.00 0.00 2.40
3212 3562 7.810282 GCTTCTCTATTACAATGCTCGAATCTA 59.190 37.037 0.00 0.00 0.00 1.98
3213 3563 9.340695 CTTCTCTATTACAATGCTCGAATCTAG 57.659 37.037 0.00 0.00 0.00 2.43
3214 3564 8.622948 TCTCTATTACAATGCTCGAATCTAGA 57.377 34.615 0.00 0.00 0.00 2.43
3215 3565 9.067986 TCTCTATTACAATGCTCGAATCTAGAA 57.932 33.333 0.00 0.00 0.00 2.10
3216 3566 9.684448 CTCTATTACAATGCTCGAATCTAGAAA 57.316 33.333 0.00 0.00 0.00 2.52
3221 3571 7.721286 ACAATGCTCGAATCTAGAAATAAGG 57.279 36.000 0.00 0.00 0.00 2.69
3222 3572 7.500992 ACAATGCTCGAATCTAGAAATAAGGA 58.499 34.615 0.00 0.00 0.00 3.36
3223 3573 7.987458 ACAATGCTCGAATCTAGAAATAAGGAA 59.013 33.333 0.00 0.00 0.00 3.36
3224 3574 8.830580 CAATGCTCGAATCTAGAAATAAGGAAA 58.169 33.333 0.00 0.00 0.00 3.13
3225 3575 9.566432 AATGCTCGAATCTAGAAATAAGGAAAT 57.434 29.630 0.00 0.00 0.00 2.17
3226 3576 8.594881 TGCTCGAATCTAGAAATAAGGAAATC 57.405 34.615 0.00 0.00 0.00 2.17
3227 3577 8.204160 TGCTCGAATCTAGAAATAAGGAAATCA 58.796 33.333 0.00 0.00 0.00 2.57
3228 3578 8.491950 GCTCGAATCTAGAAATAAGGAAATCAC 58.508 37.037 0.00 0.00 0.00 3.06
3229 3579 9.534565 CTCGAATCTAGAAATAAGGAAATCACA 57.465 33.333 0.00 0.00 0.00 3.58
3230 3580 9.884636 TCGAATCTAGAAATAAGGAAATCACAA 57.115 29.630 0.00 0.00 0.00 3.33
3232 3582 9.943163 GAATCTAGAAATAAGGAAATCACAAGC 57.057 33.333 0.00 0.00 0.00 4.01
3233 3583 9.466497 AATCTAGAAATAAGGAAATCACAAGCA 57.534 29.630 0.00 0.00 0.00 3.91
3234 3584 8.862325 TCTAGAAATAAGGAAATCACAAGCAA 57.138 30.769 0.00 0.00 0.00 3.91
3235 3585 9.295825 TCTAGAAATAAGGAAATCACAAGCAAA 57.704 29.630 0.00 0.00 0.00 3.68
3236 3586 9.912634 CTAGAAATAAGGAAATCACAAGCAAAA 57.087 29.630 0.00 0.00 0.00 2.44
3238 3588 9.211485 AGAAATAAGGAAATCACAAGCAAAATG 57.789 29.630 0.00 0.00 0.00 2.32
3239 3589 7.910441 AATAAGGAAATCACAAGCAAAATGG 57.090 32.000 0.00 0.00 0.00 3.16
3240 3590 5.549742 AAGGAAATCACAAGCAAAATGGA 57.450 34.783 0.00 0.00 0.00 3.41
3241 3591 5.549742 AGGAAATCACAAGCAAAATGGAA 57.450 34.783 0.00 0.00 0.00 3.53
3242 3592 5.927819 AGGAAATCACAAGCAAAATGGAAA 58.072 33.333 0.00 0.00 0.00 3.13
3243 3593 5.759763 AGGAAATCACAAGCAAAATGGAAAC 59.240 36.000 0.00 0.00 0.00 2.78
3270 3620 2.342478 AAAAATTACCGCCGCCACA 58.658 47.368 0.00 0.00 0.00 4.17
3271 3621 0.038983 AAAAATTACCGCCGCCACAC 60.039 50.000 0.00 0.00 0.00 3.82
3272 3622 0.891904 AAAATTACCGCCGCCACACT 60.892 50.000 0.00 0.00 0.00 3.55
3273 3623 0.891904 AAATTACCGCCGCCACACTT 60.892 50.000 0.00 0.00 0.00 3.16
3274 3624 1.582610 AATTACCGCCGCCACACTTG 61.583 55.000 0.00 0.00 0.00 3.16
3275 3625 2.741486 ATTACCGCCGCCACACTTGT 62.741 55.000 0.00 0.00 0.00 3.16
3276 3626 3.869473 TACCGCCGCCACACTTGTC 62.869 63.158 0.00 0.00 0.00 3.18
3278 3628 3.276091 CGCCGCCACACTTGTCAA 61.276 61.111 0.00 0.00 0.00 3.18
3279 3629 2.616330 CGCCGCCACACTTGTCAAT 61.616 57.895 0.00 0.00 0.00 2.57
3280 3630 1.210155 GCCGCCACACTTGTCAATC 59.790 57.895 0.00 0.00 0.00 2.67
3281 3631 1.497278 CCGCCACACTTGTCAATCG 59.503 57.895 0.00 0.00 0.00 3.34
3282 3632 1.227999 CCGCCACACTTGTCAATCGT 61.228 55.000 0.00 0.00 0.00 3.73
3283 3633 0.163788 CGCCACACTTGTCAATCGTC 59.836 55.000 0.00 0.00 0.00 4.20
3284 3634 0.517316 GCCACACTTGTCAATCGTCC 59.483 55.000 0.00 0.00 0.00 4.79
3285 3635 1.878102 GCCACACTTGTCAATCGTCCT 60.878 52.381 0.00 0.00 0.00 3.85
3286 3636 2.494059 CCACACTTGTCAATCGTCCTT 58.506 47.619 0.00 0.00 0.00 3.36
3287 3637 2.480419 CCACACTTGTCAATCGTCCTTC 59.520 50.000 0.00 0.00 0.00 3.46
3288 3638 3.130633 CACACTTGTCAATCGTCCTTCA 58.869 45.455 0.00 0.00 0.00 3.02
3289 3639 3.748048 CACACTTGTCAATCGTCCTTCAT 59.252 43.478 0.00 0.00 0.00 2.57
3290 3640 3.997021 ACACTTGTCAATCGTCCTTCATC 59.003 43.478 0.00 0.00 0.00 2.92
3291 3641 3.372206 CACTTGTCAATCGTCCTTCATCC 59.628 47.826 0.00 0.00 0.00 3.51
3292 3642 3.261897 ACTTGTCAATCGTCCTTCATCCT 59.738 43.478 0.00 0.00 0.00 3.24
3293 3643 3.981071 TGTCAATCGTCCTTCATCCTT 57.019 42.857 0.00 0.00 0.00 3.36
3294 3644 3.861840 TGTCAATCGTCCTTCATCCTTC 58.138 45.455 0.00 0.00 0.00 3.46
3295 3645 3.260632 TGTCAATCGTCCTTCATCCTTCA 59.739 43.478 0.00 0.00 0.00 3.02
3296 3646 4.080919 TGTCAATCGTCCTTCATCCTTCAT 60.081 41.667 0.00 0.00 0.00 2.57
3297 3647 4.878397 GTCAATCGTCCTTCATCCTTCATT 59.122 41.667 0.00 0.00 0.00 2.57
3298 3648 6.049149 GTCAATCGTCCTTCATCCTTCATTA 58.951 40.000 0.00 0.00 0.00 1.90
3299 3649 6.708054 GTCAATCGTCCTTCATCCTTCATTAT 59.292 38.462 0.00 0.00 0.00 1.28
3300 3650 7.872993 GTCAATCGTCCTTCATCCTTCATTATA 59.127 37.037 0.00 0.00 0.00 0.98
3301 3651 8.597167 TCAATCGTCCTTCATCCTTCATTATAT 58.403 33.333 0.00 0.00 0.00 0.86
3302 3652 8.877779 CAATCGTCCTTCATCCTTCATTATATC 58.122 37.037 0.00 0.00 0.00 1.63
3303 3653 7.539034 TCGTCCTTCATCCTTCATTATATCA 57.461 36.000 0.00 0.00 0.00 2.15
3304 3654 7.962441 TCGTCCTTCATCCTTCATTATATCAA 58.038 34.615 0.00 0.00 0.00 2.57
3305 3655 8.597167 TCGTCCTTCATCCTTCATTATATCAAT 58.403 33.333 0.00 0.00 0.00 2.57
3306 3656 8.877779 CGTCCTTCATCCTTCATTATATCAATC 58.122 37.037 0.00 0.00 0.00 2.67
3307 3657 9.730705 GTCCTTCATCCTTCATTATATCAATCA 57.269 33.333 0.00 0.00 0.00 2.57
3325 3675 6.659361 CAATCATCTTCAGATTGTCGAGTT 57.341 37.500 7.54 0.00 44.49 3.01
3326 3676 7.761651 CAATCATCTTCAGATTGTCGAGTTA 57.238 36.000 7.54 0.00 44.49 2.24
3327 3677 8.189709 CAATCATCTTCAGATTGTCGAGTTAA 57.810 34.615 7.54 0.00 44.49 2.01
3328 3678 8.824781 CAATCATCTTCAGATTGTCGAGTTAAT 58.175 33.333 7.54 0.00 44.49 1.40
3331 3681 9.302345 TCATCTTCAGATTGTCGAGTTAATAAC 57.698 33.333 0.00 0.00 31.21 1.89
3332 3682 9.087424 CATCTTCAGATTGTCGAGTTAATAACA 57.913 33.333 5.89 0.00 31.21 2.41
3333 3683 9.653287 ATCTTCAGATTGTCGAGTTAATAACAA 57.347 29.630 5.89 0.00 36.19 2.83
3334 3684 9.140286 TCTTCAGATTGTCGAGTTAATAACAAG 57.860 33.333 5.89 0.00 35.30 3.16
3335 3685 7.827819 TCAGATTGTCGAGTTAATAACAAGG 57.172 36.000 5.89 0.00 35.30 3.61
3336 3686 7.383687 TCAGATTGTCGAGTTAATAACAAGGT 58.616 34.615 5.89 0.00 35.30 3.50
3337 3687 7.330946 TCAGATTGTCGAGTTAATAACAAGGTG 59.669 37.037 5.89 0.00 35.30 4.00
3338 3688 7.330946 CAGATTGTCGAGTTAATAACAAGGTGA 59.669 37.037 5.89 0.00 35.30 4.02
3339 3689 8.041323 AGATTGTCGAGTTAATAACAAGGTGAT 58.959 33.333 5.89 0.00 35.30 3.06
3340 3690 7.972832 TTGTCGAGTTAATAACAAGGTGATT 57.027 32.000 5.89 0.00 0.00 2.57
3341 3691 7.359262 TGTCGAGTTAATAACAAGGTGATTG 57.641 36.000 5.89 0.00 45.01 2.67
3342 3692 6.128391 TGTCGAGTTAATAACAAGGTGATTGC 60.128 38.462 5.89 0.00 43.15 3.56
3343 3693 5.935206 TCGAGTTAATAACAAGGTGATTGCA 59.065 36.000 5.89 0.00 43.15 4.08
3344 3694 6.428465 TCGAGTTAATAACAAGGTGATTGCAA 59.572 34.615 0.00 0.00 43.15 4.08
3345 3695 6.523201 CGAGTTAATAACAAGGTGATTGCAAC 59.477 38.462 0.00 0.00 43.15 4.17
3346 3696 6.687604 AGTTAATAACAAGGTGATTGCAACC 58.312 36.000 0.00 0.00 43.15 3.77
3347 3697 4.535526 AATAACAAGGTGATTGCAACCC 57.464 40.909 0.00 1.94 43.15 4.11
3348 3698 0.673437 AACAAGGTGATTGCAACCCG 59.327 50.000 0.00 0.00 43.15 5.28
3349 3699 1.080569 CAAGGTGATTGCAACCCGC 60.081 57.895 0.00 3.27 42.89 6.13
3350 3700 2.275380 AAGGTGATTGCAACCCGCC 61.275 57.895 19.91 19.91 41.33 6.13
3351 3701 3.758931 GGTGATTGCAACCCGCCC 61.759 66.667 17.83 7.42 41.33 6.13
3352 3702 2.676471 GTGATTGCAACCCGCCCT 60.676 61.111 0.00 0.00 41.33 5.19
3353 3703 2.117206 TGATTGCAACCCGCCCTT 59.883 55.556 0.00 0.00 41.33 3.95
3354 3704 1.532794 TGATTGCAACCCGCCCTTT 60.533 52.632 0.00 0.00 41.33 3.11
3355 3705 1.079888 GATTGCAACCCGCCCTTTG 60.080 57.895 0.00 0.00 41.33 2.77
3356 3706 3.238755 ATTGCAACCCGCCCTTTGC 62.239 57.895 0.00 4.30 46.88 3.68
3357 3707 4.912395 TGCAACCCGCCCTTTGCT 62.912 61.111 10.99 0.00 46.83 3.91
3358 3708 4.056125 GCAACCCGCCCTTTGCTC 62.056 66.667 4.06 0.00 43.96 4.26
3359 3709 2.597217 CAACCCGCCCTTTGCTCA 60.597 61.111 0.00 0.00 38.05 4.26
3360 3710 2.197324 AACCCGCCCTTTGCTCAA 59.803 55.556 0.00 0.00 38.05 3.02
3361 3711 1.903404 AACCCGCCCTTTGCTCAAG 60.903 57.895 0.00 0.00 38.05 3.02
3362 3712 2.282462 CCCGCCCTTTGCTCAAGT 60.282 61.111 0.00 0.00 38.05 3.16
3363 3713 2.629656 CCCGCCCTTTGCTCAAGTG 61.630 63.158 0.00 0.00 38.05 3.16
3364 3714 1.600636 CCGCCCTTTGCTCAAGTGA 60.601 57.895 0.00 0.00 38.05 3.41
3365 3715 0.962356 CCGCCCTTTGCTCAAGTGAT 60.962 55.000 0.00 0.00 38.05 3.06
3366 3716 1.678728 CCGCCCTTTGCTCAAGTGATA 60.679 52.381 0.00 0.00 38.05 2.15
3367 3717 1.667724 CGCCCTTTGCTCAAGTGATAG 59.332 52.381 0.00 0.00 38.05 2.08
3368 3718 2.677902 CGCCCTTTGCTCAAGTGATAGA 60.678 50.000 0.00 0.00 38.05 1.98
3369 3719 2.680339 GCCCTTTGCTCAAGTGATAGAC 59.320 50.000 0.00 0.00 36.87 2.59
3370 3720 3.274288 CCCTTTGCTCAAGTGATAGACC 58.726 50.000 0.00 0.00 0.00 3.85
3371 3721 3.307691 CCCTTTGCTCAAGTGATAGACCA 60.308 47.826 0.00 0.00 0.00 4.02
3372 3722 4.326826 CCTTTGCTCAAGTGATAGACCAA 58.673 43.478 0.00 0.00 0.00 3.67
3373 3723 4.761739 CCTTTGCTCAAGTGATAGACCAAA 59.238 41.667 0.00 0.00 0.00 3.28
3374 3724 5.416952 CCTTTGCTCAAGTGATAGACCAAAT 59.583 40.000 0.00 0.00 0.00 2.32
3375 3725 6.404074 CCTTTGCTCAAGTGATAGACCAAATC 60.404 42.308 0.00 0.00 0.00 2.17
3376 3726 4.517285 TGCTCAAGTGATAGACCAAATCC 58.483 43.478 0.00 0.00 0.00 3.01
3377 3727 4.019411 TGCTCAAGTGATAGACCAAATCCA 60.019 41.667 0.00 0.00 0.00 3.41
3378 3728 4.943705 GCTCAAGTGATAGACCAAATCCAA 59.056 41.667 0.00 0.00 0.00 3.53
3379 3729 5.065731 GCTCAAGTGATAGACCAAATCCAAG 59.934 44.000 0.00 0.00 0.00 3.61
3380 3730 5.500234 TCAAGTGATAGACCAAATCCAAGG 58.500 41.667 0.00 0.00 0.00 3.61
3381 3731 4.510167 AGTGATAGACCAAATCCAAGGG 57.490 45.455 0.00 0.00 0.00 3.95
3382 3732 2.952310 GTGATAGACCAAATCCAAGGGC 59.048 50.000 0.00 0.00 0.00 5.19
3383 3733 2.091885 TGATAGACCAAATCCAAGGGCC 60.092 50.000 0.00 0.00 31.34 5.80
3384 3734 0.254747 TAGACCAAATCCAAGGGCCG 59.745 55.000 0.00 0.00 31.34 6.13
3385 3735 1.001393 GACCAAATCCAAGGGCCGA 60.001 57.895 0.00 0.00 0.00 5.54
3386 3736 0.610785 GACCAAATCCAAGGGCCGAA 60.611 55.000 0.00 0.00 0.00 4.30
3387 3737 0.611896 ACCAAATCCAAGGGCCGAAG 60.612 55.000 0.00 0.00 0.00 3.79
3388 3738 1.512694 CAAATCCAAGGGCCGAAGC 59.487 57.895 0.00 0.00 38.76 3.86
3389 3739 0.967380 CAAATCCAAGGGCCGAAGCT 60.967 55.000 0.00 0.00 39.73 3.74
3390 3740 0.251787 AAATCCAAGGGCCGAAGCTT 60.252 50.000 0.00 0.00 39.73 3.74
3391 3741 0.681243 AATCCAAGGGCCGAAGCTTC 60.681 55.000 16.84 16.84 39.73 3.86
3392 3742 1.852157 ATCCAAGGGCCGAAGCTTCA 61.852 55.000 25.47 3.56 39.73 3.02
3393 3743 2.042831 CCAAGGGCCGAAGCTTCAG 61.043 63.158 25.47 16.07 39.73 3.02
3394 3744 2.360475 AAGGGCCGAAGCTTCAGC 60.360 61.111 23.74 23.74 39.73 4.26
3398 3748 3.491652 GCCGAAGCTTCAGCCGTC 61.492 66.667 25.47 0.00 43.38 4.79
3399 3749 2.048222 CCGAAGCTTCAGCCGTCA 60.048 61.111 25.47 0.00 43.38 4.35
3400 3750 2.097038 CCGAAGCTTCAGCCGTCAG 61.097 63.158 25.47 6.97 43.38 3.51
3401 3751 2.097038 CGAAGCTTCAGCCGTCAGG 61.097 63.158 25.47 2.67 43.38 3.86
3402 3752 1.293498 GAAGCTTCAGCCGTCAGGA 59.707 57.895 21.67 0.00 43.38 3.86
3403 3753 1.004440 AAGCTTCAGCCGTCAGGAC 60.004 57.895 0.00 0.00 43.38 3.85
3404 3754 1.758440 AAGCTTCAGCCGTCAGGACA 61.758 55.000 0.00 0.00 43.38 4.02
3405 3755 1.078848 GCTTCAGCCGTCAGGACAT 60.079 57.895 0.00 0.00 41.02 3.06
3406 3756 1.086634 GCTTCAGCCGTCAGGACATC 61.087 60.000 0.00 0.00 41.02 3.06
3407 3757 0.534412 CTTCAGCCGTCAGGACATCT 59.466 55.000 0.00 0.00 41.02 2.90
3408 3758 0.247460 TTCAGCCGTCAGGACATCTG 59.753 55.000 10.06 10.06 44.68 2.90
3409 3759 1.812922 CAGCCGTCAGGACATCTGC 60.813 63.158 0.00 0.00 43.06 4.26
3410 3760 2.887568 GCCGTCAGGACATCTGCG 60.888 66.667 0.00 0.00 43.06 5.18
3411 3761 2.887568 CCGTCAGGACATCTGCGC 60.888 66.667 0.00 0.00 43.06 6.09
3412 3762 2.125952 CGTCAGGACATCTGCGCA 60.126 61.111 10.98 10.98 43.06 6.09
3413 3763 2.447887 CGTCAGGACATCTGCGCAC 61.448 63.158 5.66 0.00 43.06 5.34
3414 3764 2.103042 GTCAGGACATCTGCGCACC 61.103 63.158 5.66 5.80 43.06 5.01
3415 3765 2.046988 CAGGACATCTGCGCACCA 60.047 61.111 5.66 0.00 36.60 4.17
3416 3766 2.104859 CAGGACATCTGCGCACCAG 61.105 63.158 5.66 0.00 43.17 4.00
3417 3767 2.046892 GGACATCTGCGCACCAGT 60.047 61.111 5.66 4.49 42.38 4.00
3418 3768 2.103042 GGACATCTGCGCACCAGTC 61.103 63.158 5.66 14.19 42.38 3.51
3419 3769 1.374631 GACATCTGCGCACCAGTCA 60.375 57.895 20.26 0.00 42.38 3.41
3420 3770 0.742281 GACATCTGCGCACCAGTCAT 60.742 55.000 20.26 0.00 42.38 3.06
3421 3771 0.536724 ACATCTGCGCACCAGTCATA 59.463 50.000 5.66 0.00 42.38 2.15
3422 3772 1.066215 ACATCTGCGCACCAGTCATAA 60.066 47.619 5.66 0.00 42.38 1.90
3423 3773 1.328680 CATCTGCGCACCAGTCATAAC 59.671 52.381 5.66 0.00 42.38 1.89
3424 3774 0.391130 TCTGCGCACCAGTCATAACC 60.391 55.000 5.66 0.00 42.38 2.85
3425 3775 1.369091 CTGCGCACCAGTCATAACCC 61.369 60.000 5.66 0.00 36.79 4.11
3426 3776 2.112815 GCGCACCAGTCATAACCCC 61.113 63.158 0.30 0.00 0.00 4.95
3427 3777 1.451387 CGCACCAGTCATAACCCCC 60.451 63.158 0.00 0.00 0.00 5.40
3428 3778 1.910580 CGCACCAGTCATAACCCCCT 61.911 60.000 0.00 0.00 0.00 4.79
3429 3779 0.107165 GCACCAGTCATAACCCCCTC 60.107 60.000 0.00 0.00 0.00 4.30
3430 3780 0.546598 CACCAGTCATAACCCCCTCC 59.453 60.000 0.00 0.00 0.00 4.30
3431 3781 0.623617 ACCAGTCATAACCCCCTCCC 60.624 60.000 0.00 0.00 0.00 4.30
3432 3782 1.353394 CCAGTCATAACCCCCTCCCC 61.353 65.000 0.00 0.00 0.00 4.81
3433 3783 1.005690 AGTCATAACCCCCTCCCCC 59.994 63.158 0.00 0.00 0.00 5.40
3448 3798 3.416351 CCCCCTTCTCCTCCCAAC 58.584 66.667 0.00 0.00 0.00 3.77
3449 3799 2.309504 CCCCCTTCTCCTCCCAACC 61.310 68.421 0.00 0.00 0.00 3.77
3450 3800 1.229984 CCCCTTCTCCTCCCAACCT 60.230 63.158 0.00 0.00 0.00 3.50
3451 3801 1.275421 CCCCTTCTCCTCCCAACCTC 61.275 65.000 0.00 0.00 0.00 3.85
3452 3802 0.547712 CCCTTCTCCTCCCAACCTCA 60.548 60.000 0.00 0.00 0.00 3.86
3453 3803 0.908198 CCTTCTCCTCCCAACCTCAG 59.092 60.000 0.00 0.00 0.00 3.35
3454 3804 0.251634 CTTCTCCTCCCAACCTCAGC 59.748 60.000 0.00 0.00 0.00 4.26
3455 3805 1.544825 TTCTCCTCCCAACCTCAGCG 61.545 60.000 0.00 0.00 0.00 5.18
3456 3806 1.984570 CTCCTCCCAACCTCAGCGA 60.985 63.158 0.00 0.00 0.00 4.93
3457 3807 1.535444 TCCTCCCAACCTCAGCGAA 60.535 57.895 0.00 0.00 0.00 4.70
3458 3808 0.909610 TCCTCCCAACCTCAGCGAAT 60.910 55.000 0.00 0.00 0.00 3.34
3459 3809 0.035056 CCTCCCAACCTCAGCGAATT 60.035 55.000 0.00 0.00 0.00 2.17
3460 3810 1.614317 CCTCCCAACCTCAGCGAATTT 60.614 52.381 0.00 0.00 0.00 1.82
3461 3811 1.470098 CTCCCAACCTCAGCGAATTTG 59.530 52.381 0.00 0.00 0.00 2.32
3462 3812 0.109132 CCCAACCTCAGCGAATTTGC 60.109 55.000 9.87 9.87 0.00 3.68
3463 3813 0.109132 CCAACCTCAGCGAATTTGCC 60.109 55.000 14.28 0.00 34.65 4.52
3464 3814 0.883833 CAACCTCAGCGAATTTGCCT 59.116 50.000 14.28 0.00 34.65 4.75
3465 3815 1.270550 CAACCTCAGCGAATTTGCCTT 59.729 47.619 14.28 0.00 34.65 4.35
3466 3816 1.620822 ACCTCAGCGAATTTGCCTTT 58.379 45.000 14.28 0.00 34.65 3.11
3467 3817 2.790433 ACCTCAGCGAATTTGCCTTTA 58.210 42.857 14.28 0.00 34.65 1.85
3468 3818 3.356290 ACCTCAGCGAATTTGCCTTTAT 58.644 40.909 14.28 0.00 34.65 1.40
3469 3819 3.378427 ACCTCAGCGAATTTGCCTTTATC 59.622 43.478 14.28 0.00 34.65 1.75
3470 3820 3.378112 CCTCAGCGAATTTGCCTTTATCA 59.622 43.478 14.28 0.00 34.65 2.15
3471 3821 4.037208 CCTCAGCGAATTTGCCTTTATCAT 59.963 41.667 14.28 0.00 34.65 2.45
3472 3822 5.173774 TCAGCGAATTTGCCTTTATCATC 57.826 39.130 14.28 0.00 34.65 2.92
3473 3823 4.036734 TCAGCGAATTTGCCTTTATCATCC 59.963 41.667 14.28 0.00 34.65 3.51
3474 3824 4.037208 CAGCGAATTTGCCTTTATCATCCT 59.963 41.667 14.28 0.00 34.65 3.24
3475 3825 4.646492 AGCGAATTTGCCTTTATCATCCTT 59.354 37.500 14.28 0.00 34.65 3.36
3476 3826 4.978580 GCGAATTTGCCTTTATCATCCTTC 59.021 41.667 6.38 0.00 0.00 3.46
3477 3827 5.450412 GCGAATTTGCCTTTATCATCCTTCA 60.450 40.000 6.38 0.00 0.00 3.02
3478 3828 6.736794 GCGAATTTGCCTTTATCATCCTTCAT 60.737 38.462 6.38 0.00 0.00 2.57
3479 3829 7.205297 CGAATTTGCCTTTATCATCCTTCATT 58.795 34.615 0.00 0.00 0.00 2.57
3480 3830 7.707893 CGAATTTGCCTTTATCATCCTTCATTT 59.292 33.333 0.00 0.00 0.00 2.32
3481 3831 8.726870 AATTTGCCTTTATCATCCTTCATTTG 57.273 30.769 0.00 0.00 0.00 2.32
3482 3832 7.479352 TTTGCCTTTATCATCCTTCATTTGA 57.521 32.000 0.00 0.00 0.00 2.69
3483 3833 7.664552 TTGCCTTTATCATCCTTCATTTGAT 57.335 32.000 0.00 0.00 34.60 2.57
3484 3834 7.664552 TGCCTTTATCATCCTTCATTTGATT 57.335 32.000 0.00 0.00 32.58 2.57
3485 3835 7.719483 TGCCTTTATCATCCTTCATTTGATTC 58.281 34.615 0.00 0.00 32.58 2.52
3486 3836 7.342541 TGCCTTTATCATCCTTCATTTGATTCA 59.657 33.333 0.00 0.00 32.58 2.57
3487 3837 8.365647 GCCTTTATCATCCTTCATTTGATTCAT 58.634 33.333 0.00 0.00 32.58 2.57
3488 3838 9.692749 CCTTTATCATCCTTCATTTGATTCATG 57.307 33.333 0.00 0.00 32.58 3.07
3491 3841 6.704289 TCATCCTTCATTTGATTCATGACC 57.296 37.500 0.00 0.00 30.09 4.02
3492 3842 5.297527 TCATCCTTCATTTGATTCATGACCG 59.702 40.000 0.00 0.00 30.09 4.79
3493 3843 4.588899 TCCTTCATTTGATTCATGACCGT 58.411 39.130 0.00 0.00 30.09 4.83
3494 3844 4.395854 TCCTTCATTTGATTCATGACCGTG 59.604 41.667 0.00 0.00 30.09 4.94
3503 3853 4.161377 TGATTCATGACCGTGTGATTCCTA 59.839 41.667 0.00 0.00 0.00 2.94
3507 3857 1.484653 TGACCGTGTGATTCCTATGGG 59.515 52.381 0.00 0.00 0.00 4.00
3525 3875 1.974957 GGGCATGTTTGGTTAGGGTTT 59.025 47.619 0.00 0.00 0.00 3.27
3532 3882 5.497635 TGTTTGGTTAGGGTTTCGTTAAC 57.502 39.130 0.00 0.00 35.94 2.01
3542 3892 5.529014 GGGTTTCGTTAACGCAAATAGTA 57.471 39.130 22.96 0.07 46.01 1.82
3611 3966 4.086457 AGTTTTGTTTGGTTGACTCAGGT 58.914 39.130 0.00 0.00 0.00 4.00
3622 3978 1.616865 TGACTCAGGTAACGGAACAGG 59.383 52.381 0.00 0.00 41.42 4.00
3630 3986 0.611714 TAACGGAACAGGGAGAAGGC 59.388 55.000 0.00 0.00 0.00 4.35
3631 3987 1.415672 AACGGAACAGGGAGAAGGCA 61.416 55.000 0.00 0.00 0.00 4.75
3632 3988 1.201429 ACGGAACAGGGAGAAGGCAT 61.201 55.000 0.00 0.00 0.00 4.40
3633 3989 0.830648 CGGAACAGGGAGAAGGCATA 59.169 55.000 0.00 0.00 0.00 3.14
3634 3990 1.473434 CGGAACAGGGAGAAGGCATAC 60.473 57.143 0.00 0.00 0.00 2.39
3635 3991 1.473434 GGAACAGGGAGAAGGCATACG 60.473 57.143 0.00 0.00 0.00 3.06
3636 3992 1.480954 GAACAGGGAGAAGGCATACGA 59.519 52.381 0.00 0.00 0.00 3.43
3637 3993 1.794714 ACAGGGAGAAGGCATACGAT 58.205 50.000 0.00 0.00 0.00 3.73
3638 3994 1.689273 ACAGGGAGAAGGCATACGATC 59.311 52.381 0.00 0.00 0.00 3.69
3639 3995 0.962489 AGGGAGAAGGCATACGATCG 59.038 55.000 14.88 14.88 0.00 3.69
3640 3996 0.959553 GGGAGAAGGCATACGATCGA 59.040 55.000 24.34 5.87 0.00 3.59
3641 3997 1.340248 GGGAGAAGGCATACGATCGAA 59.660 52.381 24.34 0.00 0.00 3.71
3642 3998 2.608261 GGGAGAAGGCATACGATCGAAG 60.608 54.545 24.34 11.74 0.00 3.79
3643 3999 2.293677 GGAGAAGGCATACGATCGAAGA 59.706 50.000 24.34 6.86 45.75 2.87
3644 4000 3.560503 GAGAAGGCATACGATCGAAGAG 58.439 50.000 24.34 9.52 43.63 2.85
3645 4001 3.215151 AGAAGGCATACGATCGAAGAGA 58.785 45.455 24.34 1.41 43.63 3.10
3646 4002 3.823873 AGAAGGCATACGATCGAAGAGAT 59.176 43.478 24.34 0.00 43.63 2.75
3647 4003 5.004448 AGAAGGCATACGATCGAAGAGATA 58.996 41.667 24.34 2.31 43.63 1.98
3648 4004 4.955925 AGGCATACGATCGAAGAGATAG 57.044 45.455 24.34 3.63 43.63 2.08
3649 4005 3.692101 AGGCATACGATCGAAGAGATAGG 59.308 47.826 24.34 5.27 43.63 2.57
3650 4006 3.690139 GGCATACGATCGAAGAGATAGGA 59.310 47.826 24.34 0.00 43.63 2.94
3651 4007 4.156190 GGCATACGATCGAAGAGATAGGAA 59.844 45.833 24.34 0.00 43.63 3.36
3652 4008 5.335740 GGCATACGATCGAAGAGATAGGAAA 60.336 44.000 24.34 0.00 43.63 3.13
3653 4009 6.150318 GCATACGATCGAAGAGATAGGAAAA 58.850 40.000 24.34 0.00 43.63 2.29
3654 4010 6.641314 GCATACGATCGAAGAGATAGGAAAAA 59.359 38.462 24.34 0.00 43.63 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.157523 GTCGTCGTGAGCGTGTCG 61.158 66.667 0.00 0.00 39.49 4.35
56 60 0.818040 ACCGCCACTCTGTTTTCCAC 60.818 55.000 0.00 0.00 0.00 4.02
153 193 1.074775 ATCCGTGCTTAGCCCCCTA 60.075 57.895 0.29 0.00 0.00 3.53
206 246 6.347644 GCAGTTTTGTTTTCATATGGGCTTTC 60.348 38.462 2.13 0.00 0.00 2.62
281 329 5.592688 TCATTTCTTCCTCTTCCGTGTTTTT 59.407 36.000 0.00 0.00 0.00 1.94
282 330 5.130350 TCATTTCTTCCTCTTCCGTGTTTT 58.870 37.500 0.00 0.00 0.00 2.43
283 331 4.714632 TCATTTCTTCCTCTTCCGTGTTT 58.285 39.130 0.00 0.00 0.00 2.83
284 332 4.351874 TCATTTCTTCCTCTTCCGTGTT 57.648 40.909 0.00 0.00 0.00 3.32
285 333 4.351874 TTCATTTCTTCCTCTTCCGTGT 57.648 40.909 0.00 0.00 0.00 4.49
286 334 6.455646 CGTTATTCATTTCTTCCTCTTCCGTG 60.456 42.308 0.00 0.00 0.00 4.94
287 335 5.581085 CGTTATTCATTTCTTCCTCTTCCGT 59.419 40.000 0.00 0.00 0.00 4.69
288 336 5.502544 GCGTTATTCATTTCTTCCTCTTCCG 60.503 44.000 0.00 0.00 0.00 4.30
289 337 5.354234 TGCGTTATTCATTTCTTCCTCTTCC 59.646 40.000 0.00 0.00 0.00 3.46
290 338 6.422776 TGCGTTATTCATTTCTTCCTCTTC 57.577 37.500 0.00 0.00 0.00 2.87
291 339 6.599244 TGATGCGTTATTCATTTCTTCCTCTT 59.401 34.615 0.00 0.00 0.00 2.85
292 340 6.115446 TGATGCGTTATTCATTTCTTCCTCT 58.885 36.000 0.00 0.00 0.00 3.69
293 341 6.363577 TGATGCGTTATTCATTTCTTCCTC 57.636 37.500 0.00 0.00 0.00 3.71
294 342 6.543465 TCATGATGCGTTATTCATTTCTTCCT 59.457 34.615 0.00 0.00 0.00 3.36
295 343 6.728200 TCATGATGCGTTATTCATTTCTTCC 58.272 36.000 0.00 0.00 0.00 3.46
296 344 8.071967 TGATCATGATGCGTTATTCATTTCTTC 58.928 33.333 14.30 0.00 0.00 2.87
316 364 2.297315 AGCGTATCGTGGTGATGATCAT 59.703 45.455 8.25 8.25 37.99 2.45
325 373 2.331194 GTGTACAAAGCGTATCGTGGT 58.669 47.619 0.00 0.00 31.20 4.16
337 390 3.939592 TGTGTGTTCATTCCGTGTACAAA 59.060 39.130 0.00 0.00 39.41 2.83
338 391 3.310227 GTGTGTGTTCATTCCGTGTACAA 59.690 43.478 0.00 0.00 39.41 2.41
341 394 2.128821 CGTGTGTGTTCATTCCGTGTA 58.871 47.619 0.00 0.00 0.00 2.90
350 403 3.125487 CACTAACCAAACGTGTGTGTTCA 59.875 43.478 13.68 3.83 0.00 3.18
352 405 2.420722 CCACTAACCAAACGTGTGTGTT 59.579 45.455 14.42 14.42 30.75 3.32
354 407 2.011222 ACCACTAACCAAACGTGTGTG 58.989 47.619 4.73 0.00 0.00 3.82
355 408 2.406596 ACCACTAACCAAACGTGTGT 57.593 45.000 4.73 0.00 0.00 3.72
356 409 4.879104 TTAACCACTAACCAAACGTGTG 57.121 40.909 0.00 0.00 0.00 3.82
357 410 5.733937 GCAATTAACCACTAACCAAACGTGT 60.734 40.000 0.00 0.00 0.00 4.49
375 434 3.667326 TTCGCGGCTCGGGCAATTA 62.667 57.895 10.74 0.00 39.60 1.40
516 579 1.228459 AGCCAACGGGAAAAGGGTC 60.228 57.895 0.00 0.00 35.59 4.46
609 688 1.813192 GAAGACGGCTGGAGAGGAG 59.187 63.158 0.00 0.00 0.00 3.69
812 1001 5.248477 ACAAATACTTGAGGCAGGACTAGAA 59.752 40.000 0.00 0.00 36.33 2.10
951 1159 4.710865 TGCAGCCAATTCAAATATCTTGGA 59.289 37.500 4.42 0.00 40.48 3.53
1128 1340 0.464373 CCCATGGCTCGCACTTGTAT 60.464 55.000 6.09 0.00 0.00 2.29
1180 1396 5.879237 TGGTTGAAATACAGAATGAATCGC 58.121 37.500 0.00 0.00 39.69 4.58
1198 1414 2.223994 TGAATGTGTGGCATGTTGGTTG 60.224 45.455 0.00 0.00 37.96 3.77
1199 1415 2.037901 TGAATGTGTGGCATGTTGGTT 58.962 42.857 0.00 0.00 37.96 3.67
1200 1416 1.702182 TGAATGTGTGGCATGTTGGT 58.298 45.000 0.00 0.00 37.96 3.67
1201 1417 3.255725 GAATGAATGTGTGGCATGTTGG 58.744 45.455 0.00 0.00 37.96 3.77
1249 1465 1.019278 GGGAATTCAACTCGCTCGCA 61.019 55.000 7.93 0.00 0.00 5.10
1251 1467 1.726853 AAGGGAATTCAACTCGCTCG 58.273 50.000 7.93 0.00 35.23 5.03
1255 1473 6.316390 ACATAGCTAAAAGGGAATTCAACTCG 59.684 38.462 7.93 0.00 0.00 4.18
1264 1482 4.698304 CGGTTTGACATAGCTAAAAGGGAA 59.302 41.667 0.00 0.00 0.00 3.97
1265 1483 4.258543 CGGTTTGACATAGCTAAAAGGGA 58.741 43.478 0.00 0.00 0.00 4.20
1266 1484 3.181500 GCGGTTTGACATAGCTAAAAGGG 60.181 47.826 0.00 0.00 0.00 3.95
1267 1485 3.438781 TGCGGTTTGACATAGCTAAAAGG 59.561 43.478 0.00 0.00 0.00 3.11
1268 1486 4.678509 TGCGGTTTGACATAGCTAAAAG 57.321 40.909 0.00 0.00 0.00 2.27
1351 1572 8.833231 TCTAAAAGAATTATGCTATTCGAGGG 57.167 34.615 0.00 0.00 39.09 4.30
1527 1749 0.598065 GGTGACTGTGGTGATTTGGC 59.402 55.000 0.00 0.00 0.00 4.52
1573 1816 5.878116 TGTGTACTGATTACTGTAATTGGCC 59.122 40.000 13.84 0.00 33.54 5.36
1603 1846 2.224744 TGCACAGAAGGTTATGCCAGAA 60.225 45.455 0.00 0.00 40.61 3.02
1620 1867 3.589988 AGCTATGTACAGTTGAGTGCAC 58.410 45.455 9.40 9.40 36.95 4.57
1654 1901 8.557029 GTCACTGTACAAACTAGCTATGTTTTT 58.443 33.333 14.69 12.40 35.71 1.94
1655 1902 7.172703 GGTCACTGTACAAACTAGCTATGTTTT 59.827 37.037 14.69 4.60 35.71 2.43
1656 1903 6.649557 GGTCACTGTACAAACTAGCTATGTTT 59.350 38.462 12.65 12.65 38.04 2.83
1657 1904 6.164176 GGTCACTGTACAAACTAGCTATGTT 58.836 40.000 3.90 3.73 0.00 2.71
1658 1905 5.245301 TGGTCACTGTACAAACTAGCTATGT 59.755 40.000 0.00 4.04 0.00 2.29
1659 1906 5.720202 TGGTCACTGTACAAACTAGCTATG 58.280 41.667 0.00 0.00 0.00 2.23
1679 1926 6.182627 TCTTAGCATTCTCATTCACATTGGT 58.817 36.000 0.00 0.00 0.00 3.67
1711 1958 3.818961 AGAATGATCAAACGCACACAG 57.181 42.857 0.00 0.00 0.00 3.66
1893 2140 2.811317 GTCTTCCTGACGCCGCAG 60.811 66.667 2.22 2.22 35.81 5.18
2303 2556 0.026803 GCCGTCGATGAAGAATGTGC 59.973 55.000 6.11 0.00 0.00 4.57
2430 2683 2.370849 GGTGGAGGAGAAGGTGTTGTTA 59.629 50.000 0.00 0.00 0.00 2.41
2682 2944 3.753272 CCACGATCTTGGTTGTGAAATCT 59.247 43.478 10.08 0.00 35.86 2.40
2683 2945 4.083581 CCACGATCTTGGTTGTGAAATC 57.916 45.455 10.08 0.00 35.86 2.17
2699 2961 2.995258 GTTGCCGAAATTACTACCACGA 59.005 45.455 0.00 0.00 0.00 4.35
2700 2962 2.737783 TGTTGCCGAAATTACTACCACG 59.262 45.455 0.00 0.00 0.00 4.94
2701 2963 3.998341 TCTGTTGCCGAAATTACTACCAC 59.002 43.478 0.00 0.00 0.00 4.16
2702 2964 4.250464 CTCTGTTGCCGAAATTACTACCA 58.750 43.478 0.00 0.00 0.00 3.25
2703 2965 3.621715 CCTCTGTTGCCGAAATTACTACC 59.378 47.826 0.00 0.00 0.00 3.18
2773 3037 0.035534 TACGACCCGTACACTGGCTA 60.036 55.000 0.00 0.00 41.54 3.93
2801 3069 4.084507 CACAGTACTACGTACGCTTACAC 58.915 47.826 16.72 7.31 43.05 2.90
2808 3076 3.729684 CTGACACACAGTACTACGTACG 58.270 50.000 15.01 15.01 43.05 3.67
2822 3090 1.275010 AGACACACACACACTGACACA 59.725 47.619 0.00 0.00 0.00 3.72
2823 3091 2.010145 AGACACACACACACTGACAC 57.990 50.000 0.00 0.00 0.00 3.67
2824 3092 2.289382 ACAAGACACACACACACTGACA 60.289 45.455 0.00 0.00 0.00 3.58
2825 3093 2.346803 ACAAGACACACACACACTGAC 58.653 47.619 0.00 0.00 0.00 3.51
2826 3094 2.760634 ACAAGACACACACACACTGA 57.239 45.000 0.00 0.00 0.00 3.41
2882 3163 3.733344 AAGTGTCGTGCCACAGCGT 62.733 57.895 0.00 0.00 44.31 5.07
2918 3203 3.065233 CAGCAGCTAGTACAGAGACTGAG 59.935 52.174 16.29 8.81 35.18 3.35
2941 3226 3.381272 CCGAAATGGGAGCACAACATATT 59.619 43.478 0.00 0.00 0.00 1.28
2997 3309 8.149647 TGCATCAATCAATGGGGAATTTTATAC 58.850 33.333 0.00 0.00 0.00 1.47
2998 3310 8.260099 TGCATCAATCAATGGGGAATTTTATA 57.740 30.769 0.00 0.00 0.00 0.98
2999 3311 7.071447 TCTGCATCAATCAATGGGGAATTTTAT 59.929 33.333 0.00 0.00 0.00 1.40
3000 3312 6.383436 TCTGCATCAATCAATGGGGAATTTTA 59.617 34.615 0.00 0.00 0.00 1.52
3001 3313 5.190132 TCTGCATCAATCAATGGGGAATTTT 59.810 36.000 0.00 0.00 0.00 1.82
3002 3314 4.717778 TCTGCATCAATCAATGGGGAATTT 59.282 37.500 0.00 0.00 0.00 1.82
3004 3316 3.895656 CTCTGCATCAATCAATGGGGAAT 59.104 43.478 0.00 0.00 0.00 3.01
3005 3317 3.293337 CTCTGCATCAATCAATGGGGAA 58.707 45.455 0.00 0.00 0.00 3.97
3006 3318 2.423803 CCTCTGCATCAATCAATGGGGA 60.424 50.000 0.00 0.00 0.00 4.81
3007 3319 1.961394 CCTCTGCATCAATCAATGGGG 59.039 52.381 0.00 0.00 0.00 4.96
3008 3320 1.961394 CCCTCTGCATCAATCAATGGG 59.039 52.381 0.00 0.00 0.00 4.00
3009 3321 2.621998 GACCCTCTGCATCAATCAATGG 59.378 50.000 0.00 0.00 0.00 3.16
3015 3365 3.657398 TTCATGACCCTCTGCATCAAT 57.343 42.857 0.00 0.00 0.00 2.57
3044 3394 9.483062 CAAATGAATAAAACTTGCGTTTGAAAA 57.517 25.926 0.00 0.00 42.28 2.29
3045 3395 8.873830 TCAAATGAATAAAACTTGCGTTTGAAA 58.126 25.926 0.00 0.00 42.28 2.69
3046 3396 8.412608 TCAAATGAATAAAACTTGCGTTTGAA 57.587 26.923 0.00 0.00 42.28 2.69
3047 3397 7.993821 TCAAATGAATAAAACTTGCGTTTGA 57.006 28.000 0.00 0.00 42.28 2.69
3048 3398 9.649024 ATTTCAAATGAATAAAACTTGCGTTTG 57.351 25.926 0.00 0.00 37.37 2.93
3052 3402 9.739786 GGTTATTTCAAATGAATAAAACTTGCG 57.260 29.630 0.00 0.00 33.54 4.85
3070 3420 9.878599 CCTCGTAAATGATGTAATGGTTATTTC 57.121 33.333 0.00 0.00 0.00 2.17
3071 3421 9.621629 TCCTCGTAAATGATGTAATGGTTATTT 57.378 29.630 0.00 0.00 0.00 1.40
3072 3422 9.793259 ATCCTCGTAAATGATGTAATGGTTATT 57.207 29.630 0.00 0.00 0.00 1.40
3073 3423 9.793259 AATCCTCGTAAATGATGTAATGGTTAT 57.207 29.630 0.00 0.00 0.00 1.89
3074 3424 9.051679 CAATCCTCGTAAATGATGTAATGGTTA 57.948 33.333 0.00 0.00 0.00 2.85
3075 3425 7.013274 CCAATCCTCGTAAATGATGTAATGGTT 59.987 37.037 0.00 0.00 0.00 3.67
3076 3426 6.486657 CCAATCCTCGTAAATGATGTAATGGT 59.513 38.462 0.00 0.00 0.00 3.55
3077 3427 6.486657 ACCAATCCTCGTAAATGATGTAATGG 59.513 38.462 0.00 0.00 0.00 3.16
3078 3428 7.496529 ACCAATCCTCGTAAATGATGTAATG 57.503 36.000 0.00 0.00 0.00 1.90
3079 3429 7.384115 CGTACCAATCCTCGTAAATGATGTAAT 59.616 37.037 0.00 0.00 0.00 1.89
3080 3430 6.698329 CGTACCAATCCTCGTAAATGATGTAA 59.302 38.462 0.00 0.00 0.00 2.41
3081 3431 6.039605 TCGTACCAATCCTCGTAAATGATGTA 59.960 38.462 0.00 0.00 0.00 2.29
3082 3432 5.047847 CGTACCAATCCTCGTAAATGATGT 58.952 41.667 0.00 0.00 0.00 3.06
3083 3433 5.286438 TCGTACCAATCCTCGTAAATGATG 58.714 41.667 0.00 0.00 0.00 3.07
3084 3434 5.524971 TCGTACCAATCCTCGTAAATGAT 57.475 39.130 0.00 0.00 0.00 2.45
3085 3435 4.987408 TCGTACCAATCCTCGTAAATGA 57.013 40.909 0.00 0.00 0.00 2.57
3086 3436 6.256975 TGAAATCGTACCAATCCTCGTAAATG 59.743 38.462 0.00 0.00 0.00 2.32
3087 3437 6.342906 TGAAATCGTACCAATCCTCGTAAAT 58.657 36.000 0.00 0.00 0.00 1.40
3088 3438 5.722263 TGAAATCGTACCAATCCTCGTAAA 58.278 37.500 0.00 0.00 0.00 2.01
3089 3439 5.327616 TGAAATCGTACCAATCCTCGTAA 57.672 39.130 0.00 0.00 0.00 3.18
3090 3440 4.987408 TGAAATCGTACCAATCCTCGTA 57.013 40.909 0.00 0.00 0.00 3.43
3091 3441 3.880047 TGAAATCGTACCAATCCTCGT 57.120 42.857 0.00 0.00 0.00 4.18
3092 3442 5.734855 AAATGAAATCGTACCAATCCTCG 57.265 39.130 0.00 0.00 0.00 4.63
3093 3443 8.129211 CCTTTAAATGAAATCGTACCAATCCTC 58.871 37.037 0.00 0.00 0.00 3.71
3094 3444 7.416326 GCCTTTAAATGAAATCGTACCAATCCT 60.416 37.037 0.00 0.00 0.00 3.24
3095 3445 6.695713 GCCTTTAAATGAAATCGTACCAATCC 59.304 38.462 0.00 0.00 0.00 3.01
3096 3446 7.480810 AGCCTTTAAATGAAATCGTACCAATC 58.519 34.615 0.00 0.00 0.00 2.67
3097 3447 7.339466 AGAGCCTTTAAATGAAATCGTACCAAT 59.661 33.333 0.00 0.00 0.00 3.16
3098 3448 6.657541 AGAGCCTTTAAATGAAATCGTACCAA 59.342 34.615 0.00 0.00 0.00 3.67
3099 3449 6.177610 AGAGCCTTTAAATGAAATCGTACCA 58.822 36.000 0.00 0.00 0.00 3.25
3100 3450 6.315393 TGAGAGCCTTTAAATGAAATCGTACC 59.685 38.462 0.00 0.00 0.00 3.34
3101 3451 7.303634 TGAGAGCCTTTAAATGAAATCGTAC 57.696 36.000 0.00 0.00 0.00 3.67
3102 3452 7.915293 TTGAGAGCCTTTAAATGAAATCGTA 57.085 32.000 0.00 0.00 0.00 3.43
3103 3453 6.817765 TTGAGAGCCTTTAAATGAAATCGT 57.182 33.333 0.00 0.00 0.00 3.73
3104 3454 6.528072 GGTTTGAGAGCCTTTAAATGAAATCG 59.472 38.462 0.00 0.00 0.00 3.34
3105 3455 7.378181 TGGTTTGAGAGCCTTTAAATGAAATC 58.622 34.615 0.00 0.00 0.00 2.17
3106 3456 7.301868 TGGTTTGAGAGCCTTTAAATGAAAT 57.698 32.000 0.00 0.00 0.00 2.17
3107 3457 6.723298 TGGTTTGAGAGCCTTTAAATGAAA 57.277 33.333 0.00 0.00 0.00 2.69
3108 3458 6.723298 TTGGTTTGAGAGCCTTTAAATGAA 57.277 33.333 0.00 0.00 0.00 2.57
3109 3459 6.723298 TTTGGTTTGAGAGCCTTTAAATGA 57.277 33.333 0.00 0.00 0.00 2.57
3110 3460 9.487790 TTTATTTGGTTTGAGAGCCTTTAAATG 57.512 29.630 0.00 0.00 0.00 2.32
3112 3462 9.541143 CTTTTATTTGGTTTGAGAGCCTTTAAA 57.459 29.630 0.00 0.00 0.00 1.52
3113 3463 8.700973 ACTTTTATTTGGTTTGAGAGCCTTTAA 58.299 29.630 0.00 0.00 0.00 1.52
3114 3464 8.245195 ACTTTTATTTGGTTTGAGAGCCTTTA 57.755 30.769 0.00 0.00 0.00 1.85
3115 3465 7.124573 ACTTTTATTTGGTTTGAGAGCCTTT 57.875 32.000 0.00 0.00 0.00 3.11
3116 3466 6.731292 ACTTTTATTTGGTTTGAGAGCCTT 57.269 33.333 0.00 0.00 0.00 4.35
3117 3467 6.731292 AACTTTTATTTGGTTTGAGAGCCT 57.269 33.333 0.00 0.00 0.00 4.58
3118 3468 8.880878 TTTAACTTTTATTTGGTTTGAGAGCC 57.119 30.769 0.00 0.00 0.00 4.70
3119 3469 9.744468 TCTTTAACTTTTATTTGGTTTGAGAGC 57.256 29.630 0.00 0.00 0.00 4.09
3128 3478 9.841880 GCTAGGTTCTCTTTAACTTTTATTTGG 57.158 33.333 0.00 0.00 0.00 3.28
3129 3479 9.841880 GGCTAGGTTCTCTTTAACTTTTATTTG 57.158 33.333 0.00 0.00 0.00 2.32
3130 3480 9.582648 TGGCTAGGTTCTCTTTAACTTTTATTT 57.417 29.630 0.00 0.00 0.00 1.40
3131 3481 9.582648 TTGGCTAGGTTCTCTTTAACTTTTATT 57.417 29.630 0.00 0.00 0.00 1.40
3132 3482 9.011095 GTTGGCTAGGTTCTCTTTAACTTTTAT 57.989 33.333 0.00 0.00 0.00 1.40
3133 3483 7.446319 GGTTGGCTAGGTTCTCTTTAACTTTTA 59.554 37.037 0.00 0.00 0.00 1.52
3134 3484 6.264744 GGTTGGCTAGGTTCTCTTTAACTTTT 59.735 38.462 0.00 0.00 0.00 2.27
3135 3485 5.768662 GGTTGGCTAGGTTCTCTTTAACTTT 59.231 40.000 0.00 0.00 0.00 2.66
3136 3486 5.073280 AGGTTGGCTAGGTTCTCTTTAACTT 59.927 40.000 0.00 0.00 0.00 2.66
3137 3487 4.597940 AGGTTGGCTAGGTTCTCTTTAACT 59.402 41.667 0.00 0.00 0.00 2.24
3138 3488 4.907809 AGGTTGGCTAGGTTCTCTTTAAC 58.092 43.478 0.00 0.00 0.00 2.01
3139 3489 5.338137 GCTAGGTTGGCTAGGTTCTCTTTAA 60.338 44.000 0.00 0.00 0.00 1.52
3140 3490 4.161754 GCTAGGTTGGCTAGGTTCTCTTTA 59.838 45.833 0.00 0.00 0.00 1.85
3141 3491 3.055021 GCTAGGTTGGCTAGGTTCTCTTT 60.055 47.826 0.00 0.00 0.00 2.52
3142 3492 2.502130 GCTAGGTTGGCTAGGTTCTCTT 59.498 50.000 0.00 0.00 0.00 2.85
3143 3493 2.112190 GCTAGGTTGGCTAGGTTCTCT 58.888 52.381 0.00 0.00 0.00 3.10
3144 3494 1.831736 TGCTAGGTTGGCTAGGTTCTC 59.168 52.381 0.00 0.00 0.00 2.87
3145 3495 1.952621 TGCTAGGTTGGCTAGGTTCT 58.047 50.000 0.00 0.00 0.00 3.01
3146 3496 2.633488 CTTGCTAGGTTGGCTAGGTTC 58.367 52.381 0.00 0.00 0.00 3.62
3147 3497 1.340114 GCTTGCTAGGTTGGCTAGGTT 60.340 52.381 0.00 0.00 34.23 3.50
3148 3498 0.253327 GCTTGCTAGGTTGGCTAGGT 59.747 55.000 0.00 0.00 34.23 3.08
3149 3499 0.543749 AGCTTGCTAGGTTGGCTAGG 59.456 55.000 0.00 0.00 34.23 3.02
3150 3500 1.208052 TGAGCTTGCTAGGTTGGCTAG 59.792 52.381 0.48 0.00 36.09 3.42
3151 3501 1.275666 TGAGCTTGCTAGGTTGGCTA 58.724 50.000 0.48 0.00 33.13 3.93
3152 3502 0.622665 ATGAGCTTGCTAGGTTGGCT 59.377 50.000 0.48 0.00 35.86 4.75
3153 3503 0.737219 CATGAGCTTGCTAGGTTGGC 59.263 55.000 0.48 0.00 30.79 4.52
3154 3504 2.286872 CTCATGAGCTTGCTAGGTTGG 58.713 52.381 10.38 0.00 30.79 3.77
3180 3530 8.551205 CGAGCATTGTAATAGAGAAGCAAATAA 58.449 33.333 0.00 0.00 0.00 1.40
3181 3531 7.926018 TCGAGCATTGTAATAGAGAAGCAAATA 59.074 33.333 0.00 0.00 0.00 1.40
3182 3532 6.763135 TCGAGCATTGTAATAGAGAAGCAAAT 59.237 34.615 0.00 0.00 0.00 2.32
3183 3533 6.106003 TCGAGCATTGTAATAGAGAAGCAAA 58.894 36.000 0.00 0.00 0.00 3.68
3184 3534 5.660460 TCGAGCATTGTAATAGAGAAGCAA 58.340 37.500 0.00 0.00 0.00 3.91
3185 3535 5.262588 TCGAGCATTGTAATAGAGAAGCA 57.737 39.130 0.00 0.00 0.00 3.91
3186 3536 6.644592 AGATTCGAGCATTGTAATAGAGAAGC 59.355 38.462 0.00 0.00 0.00 3.86
3187 3537 9.340695 CTAGATTCGAGCATTGTAATAGAGAAG 57.659 37.037 0.00 0.00 0.00 2.85
3188 3538 9.067986 TCTAGATTCGAGCATTGTAATAGAGAA 57.932 33.333 0.00 0.00 0.00 2.87
3189 3539 8.622948 TCTAGATTCGAGCATTGTAATAGAGA 57.377 34.615 0.00 0.00 0.00 3.10
3190 3540 9.684448 TTTCTAGATTCGAGCATTGTAATAGAG 57.316 33.333 0.00 0.00 0.00 2.43
3195 3545 9.261180 CCTTATTTCTAGATTCGAGCATTGTAA 57.739 33.333 0.00 0.00 0.00 2.41
3196 3546 8.638873 TCCTTATTTCTAGATTCGAGCATTGTA 58.361 33.333 0.00 0.00 0.00 2.41
3197 3547 7.500992 TCCTTATTTCTAGATTCGAGCATTGT 58.499 34.615 0.00 0.00 0.00 2.71
3198 3548 7.953158 TCCTTATTTCTAGATTCGAGCATTG 57.047 36.000 0.00 0.00 0.00 2.82
3199 3549 8.964476 TTTCCTTATTTCTAGATTCGAGCATT 57.036 30.769 0.00 0.00 0.00 3.56
3200 3550 9.213799 GATTTCCTTATTTCTAGATTCGAGCAT 57.786 33.333 0.00 0.00 0.00 3.79
3201 3551 8.204160 TGATTTCCTTATTTCTAGATTCGAGCA 58.796 33.333 0.00 0.00 0.00 4.26
3202 3552 8.491950 GTGATTTCCTTATTTCTAGATTCGAGC 58.508 37.037 0.00 0.00 0.00 5.03
3203 3553 9.534565 TGTGATTTCCTTATTTCTAGATTCGAG 57.465 33.333 0.00 0.00 0.00 4.04
3204 3554 9.884636 TTGTGATTTCCTTATTTCTAGATTCGA 57.115 29.630 0.00 0.00 0.00 3.71
3206 3556 9.943163 GCTTGTGATTTCCTTATTTCTAGATTC 57.057 33.333 0.00 0.00 0.00 2.52
3207 3557 9.466497 TGCTTGTGATTTCCTTATTTCTAGATT 57.534 29.630 0.00 0.00 0.00 2.40
3208 3558 9.466497 TTGCTTGTGATTTCCTTATTTCTAGAT 57.534 29.630 0.00 0.00 0.00 1.98
3209 3559 8.862325 TTGCTTGTGATTTCCTTATTTCTAGA 57.138 30.769 0.00 0.00 0.00 2.43
3210 3560 9.912634 TTTTGCTTGTGATTTCCTTATTTCTAG 57.087 29.630 0.00 0.00 0.00 2.43
3212 3562 9.211485 CATTTTGCTTGTGATTTCCTTATTTCT 57.789 29.630 0.00 0.00 0.00 2.52
3213 3563 8.445493 CCATTTTGCTTGTGATTTCCTTATTTC 58.555 33.333 0.00 0.00 0.00 2.17
3214 3564 8.156165 TCCATTTTGCTTGTGATTTCCTTATTT 58.844 29.630 0.00 0.00 0.00 1.40
3215 3565 7.678837 TCCATTTTGCTTGTGATTTCCTTATT 58.321 30.769 0.00 0.00 0.00 1.40
3216 3566 7.243604 TCCATTTTGCTTGTGATTTCCTTAT 57.756 32.000 0.00 0.00 0.00 1.73
3217 3567 6.662865 TCCATTTTGCTTGTGATTTCCTTA 57.337 33.333 0.00 0.00 0.00 2.69
3218 3568 5.549742 TCCATTTTGCTTGTGATTTCCTT 57.450 34.783 0.00 0.00 0.00 3.36
3219 3569 5.549742 TTCCATTTTGCTTGTGATTTCCT 57.450 34.783 0.00 0.00 0.00 3.36
3220 3570 5.526846 TGTTTCCATTTTGCTTGTGATTTCC 59.473 36.000 0.00 0.00 0.00 3.13
3221 3571 6.601741 TGTTTCCATTTTGCTTGTGATTTC 57.398 33.333 0.00 0.00 0.00 2.17
3222 3572 7.282675 TGAATGTTTCCATTTTGCTTGTGATTT 59.717 29.630 0.00 0.00 41.37 2.17
3223 3573 6.766944 TGAATGTTTCCATTTTGCTTGTGATT 59.233 30.769 0.00 0.00 41.37 2.57
3224 3574 6.289834 TGAATGTTTCCATTTTGCTTGTGAT 58.710 32.000 0.00 0.00 41.37 3.06
3225 3575 5.668471 TGAATGTTTCCATTTTGCTTGTGA 58.332 33.333 0.00 0.00 41.37 3.58
3226 3576 5.987777 TGAATGTTTCCATTTTGCTTGTG 57.012 34.783 0.00 0.00 41.37 3.33
3227 3577 6.289834 TCATGAATGTTTCCATTTTGCTTGT 58.710 32.000 0.00 0.00 41.37 3.16
3228 3578 6.788684 TCATGAATGTTTCCATTTTGCTTG 57.211 33.333 0.00 0.00 41.37 4.01
3229 3579 7.804843 TTTCATGAATGTTTCCATTTTGCTT 57.195 28.000 9.40 0.00 41.37 3.91
3230 3580 7.804843 TTTTCATGAATGTTTCCATTTTGCT 57.195 28.000 9.40 0.00 41.37 3.91
3252 3602 0.038983 GTGTGGCGGCGGTAATTTTT 60.039 50.000 9.78 0.00 0.00 1.94
3253 3603 0.891904 AGTGTGGCGGCGGTAATTTT 60.892 50.000 9.78 0.00 0.00 1.82
3254 3604 0.891904 AAGTGTGGCGGCGGTAATTT 60.892 50.000 9.78 0.00 0.00 1.82
3255 3605 1.302993 AAGTGTGGCGGCGGTAATT 60.303 52.632 9.78 0.00 0.00 1.40
3256 3606 2.038269 CAAGTGTGGCGGCGGTAAT 61.038 57.895 9.78 0.00 0.00 1.89
3257 3607 2.666862 CAAGTGTGGCGGCGGTAA 60.667 61.111 9.78 0.00 0.00 2.85
3258 3608 3.869473 GACAAGTGTGGCGGCGGTA 62.869 63.158 9.78 0.00 0.00 4.02
3261 3611 2.513065 GATTGACAAGTGTGGCGGCG 62.513 60.000 0.51 0.51 34.30 6.46
3262 3612 1.210155 GATTGACAAGTGTGGCGGC 59.790 57.895 0.00 0.00 34.30 6.53
3263 3613 1.227999 ACGATTGACAAGTGTGGCGG 61.228 55.000 0.00 0.00 34.30 6.13
3264 3614 0.163788 GACGATTGACAAGTGTGGCG 59.836 55.000 0.00 0.00 34.30 5.69
3265 3615 0.517316 GGACGATTGACAAGTGTGGC 59.483 55.000 0.00 0.00 0.00 5.01
3266 3616 2.169832 AGGACGATTGACAAGTGTGG 57.830 50.000 0.00 0.00 0.00 4.17
3267 3617 3.130633 TGAAGGACGATTGACAAGTGTG 58.869 45.455 0.00 0.00 0.00 3.82
3268 3618 3.469008 TGAAGGACGATTGACAAGTGT 57.531 42.857 0.00 0.00 0.00 3.55
3269 3619 3.372206 GGATGAAGGACGATTGACAAGTG 59.628 47.826 0.00 0.00 0.00 3.16
3270 3620 3.261897 AGGATGAAGGACGATTGACAAGT 59.738 43.478 0.00 0.00 0.00 3.16
3271 3621 3.866651 AGGATGAAGGACGATTGACAAG 58.133 45.455 0.00 0.00 0.00 3.16
3272 3622 3.981071 AGGATGAAGGACGATTGACAA 57.019 42.857 0.00 0.00 0.00 3.18
3273 3623 3.260632 TGAAGGATGAAGGACGATTGACA 59.739 43.478 0.00 0.00 0.00 3.58
3274 3624 3.861840 TGAAGGATGAAGGACGATTGAC 58.138 45.455 0.00 0.00 0.00 3.18
3275 3625 4.760530 ATGAAGGATGAAGGACGATTGA 57.239 40.909 0.00 0.00 0.00 2.57
3276 3626 8.783833 ATATAATGAAGGATGAAGGACGATTG 57.216 34.615 0.00 0.00 0.00 2.67
3277 3627 8.597167 TGATATAATGAAGGATGAAGGACGATT 58.403 33.333 0.00 0.00 0.00 3.34
3278 3628 8.138928 TGATATAATGAAGGATGAAGGACGAT 57.861 34.615 0.00 0.00 0.00 3.73
3279 3629 7.539034 TGATATAATGAAGGATGAAGGACGA 57.461 36.000 0.00 0.00 0.00 4.20
3280 3630 8.783833 ATTGATATAATGAAGGATGAAGGACG 57.216 34.615 0.00 0.00 0.00 4.79
3281 3631 9.730705 TGATTGATATAATGAAGGATGAAGGAC 57.269 33.333 0.00 0.00 0.00 3.85
3303 3653 8.954950 ATTAACTCGACAATCTGAAGATGATT 57.045 30.769 0.00 0.00 34.49 2.57
3305 3655 9.302345 GTTATTAACTCGACAATCTGAAGATGA 57.698 33.333 0.00 0.00 34.49 2.92
3306 3656 9.087424 TGTTATTAACTCGACAATCTGAAGATG 57.913 33.333 7.99 0.00 34.49 2.90
3307 3657 9.653287 TTGTTATTAACTCGACAATCTGAAGAT 57.347 29.630 7.99 0.00 36.07 2.40
3308 3658 9.140286 CTTGTTATTAACTCGACAATCTGAAGA 57.860 33.333 7.99 0.00 32.23 2.87
3309 3659 8.383619 CCTTGTTATTAACTCGACAATCTGAAG 58.616 37.037 7.99 0.00 32.23 3.02
3310 3660 7.876068 ACCTTGTTATTAACTCGACAATCTGAA 59.124 33.333 7.99 0.00 32.23 3.02
3311 3661 7.330946 CACCTTGTTATTAACTCGACAATCTGA 59.669 37.037 7.99 0.00 32.23 3.27
3312 3662 7.330946 TCACCTTGTTATTAACTCGACAATCTG 59.669 37.037 7.99 0.00 32.23 2.90
3313 3663 7.383687 TCACCTTGTTATTAACTCGACAATCT 58.616 34.615 7.99 0.00 32.23 2.40
3314 3664 7.591006 TCACCTTGTTATTAACTCGACAATC 57.409 36.000 7.99 0.00 32.23 2.67
3315 3665 8.450964 CAATCACCTTGTTATTAACTCGACAAT 58.549 33.333 7.99 0.00 32.23 2.71
3316 3666 7.572353 GCAATCACCTTGTTATTAACTCGACAA 60.572 37.037 7.99 0.00 37.18 3.18
3317 3667 6.128391 GCAATCACCTTGTTATTAACTCGACA 60.128 38.462 7.99 0.00 37.18 4.35
3318 3668 6.128391 TGCAATCACCTTGTTATTAACTCGAC 60.128 38.462 7.99 0.00 37.18 4.20
3319 3669 5.935206 TGCAATCACCTTGTTATTAACTCGA 59.065 36.000 7.99 0.00 37.18 4.04
3320 3670 6.176975 TGCAATCACCTTGTTATTAACTCG 57.823 37.500 7.99 0.00 37.18 4.18
3321 3671 6.806739 GGTTGCAATCACCTTGTTATTAACTC 59.193 38.462 4.39 0.00 37.18 3.01
3322 3672 6.295067 GGGTTGCAATCACCTTGTTATTAACT 60.295 38.462 12.67 0.00 37.18 2.24
3323 3673 5.867174 GGGTTGCAATCACCTTGTTATTAAC 59.133 40.000 12.67 0.00 37.18 2.01
3324 3674 5.336055 CGGGTTGCAATCACCTTGTTATTAA 60.336 40.000 12.67 0.00 37.18 1.40
3325 3675 4.156922 CGGGTTGCAATCACCTTGTTATTA 59.843 41.667 12.67 0.00 37.18 0.98
3326 3676 3.056891 CGGGTTGCAATCACCTTGTTATT 60.057 43.478 12.67 0.00 37.18 1.40
3327 3677 2.491693 CGGGTTGCAATCACCTTGTTAT 59.508 45.455 12.67 0.00 37.18 1.89
3328 3678 1.883275 CGGGTTGCAATCACCTTGTTA 59.117 47.619 12.67 0.00 37.18 2.41
3329 3679 0.673437 CGGGTTGCAATCACCTTGTT 59.327 50.000 12.67 0.00 37.18 2.83
3330 3680 1.805428 GCGGGTTGCAATCACCTTGT 61.805 55.000 12.67 0.00 45.45 3.16
3331 3681 1.080569 GCGGGTTGCAATCACCTTG 60.081 57.895 12.67 3.52 45.45 3.61
3332 3682 3.365535 GCGGGTTGCAATCACCTT 58.634 55.556 12.67 0.00 45.45 3.50
3348 3698 2.680339 GTCTATCACTTGAGCAAAGGGC 59.320 50.000 4.43 0.00 39.36 5.19
3349 3699 3.274288 GGTCTATCACTTGAGCAAAGGG 58.726 50.000 4.43 0.04 41.06 3.95
3350 3700 3.942829 TGGTCTATCACTTGAGCAAAGG 58.057 45.455 4.43 0.00 40.51 3.11
3353 3703 4.943705 GGATTTGGTCTATCACTTGAGCAA 59.056 41.667 0.00 0.00 45.15 3.91
3354 3704 4.019411 TGGATTTGGTCTATCACTTGAGCA 60.019 41.667 0.00 0.00 38.66 4.26
3355 3705 4.517285 TGGATTTGGTCTATCACTTGAGC 58.483 43.478 0.00 0.00 0.00 4.26
3356 3706 5.587844 CCTTGGATTTGGTCTATCACTTGAG 59.412 44.000 0.00 0.00 0.00 3.02
3357 3707 5.500234 CCTTGGATTTGGTCTATCACTTGA 58.500 41.667 0.00 0.00 0.00 3.02
3358 3708 4.641989 CCCTTGGATTTGGTCTATCACTTG 59.358 45.833 0.00 0.00 0.00 3.16
3359 3709 4.860022 CCCTTGGATTTGGTCTATCACTT 58.140 43.478 0.00 0.00 0.00 3.16
3360 3710 3.372025 GCCCTTGGATTTGGTCTATCACT 60.372 47.826 0.00 0.00 0.00 3.41
3361 3711 2.952310 GCCCTTGGATTTGGTCTATCAC 59.048 50.000 0.00 0.00 0.00 3.06
3362 3712 2.091885 GGCCCTTGGATTTGGTCTATCA 60.092 50.000 0.00 0.00 0.00 2.15
3363 3713 2.587522 GGCCCTTGGATTTGGTCTATC 58.412 52.381 0.00 0.00 0.00 2.08
3364 3714 1.133792 CGGCCCTTGGATTTGGTCTAT 60.134 52.381 0.00 0.00 0.00 1.98
3365 3715 0.254747 CGGCCCTTGGATTTGGTCTA 59.745 55.000 0.00 0.00 0.00 2.59
3366 3716 1.000896 CGGCCCTTGGATTTGGTCT 60.001 57.895 0.00 0.00 0.00 3.85
3367 3717 0.610785 TTCGGCCCTTGGATTTGGTC 60.611 55.000 0.00 0.00 0.00 4.02
3368 3718 0.611896 CTTCGGCCCTTGGATTTGGT 60.612 55.000 0.00 0.00 0.00 3.67
3369 3719 1.948721 GCTTCGGCCCTTGGATTTGG 61.949 60.000 0.00 0.00 34.32 3.28
3370 3720 0.967380 AGCTTCGGCCCTTGGATTTG 60.967 55.000 0.00 0.00 43.01 2.32
3371 3721 0.251787 AAGCTTCGGCCCTTGGATTT 60.252 50.000 0.00 0.00 43.01 2.17
3372 3722 0.681243 GAAGCTTCGGCCCTTGGATT 60.681 55.000 11.40 0.00 43.01 3.01
3373 3723 1.077429 GAAGCTTCGGCCCTTGGAT 60.077 57.895 11.40 0.00 43.01 3.41
3374 3724 2.351276 GAAGCTTCGGCCCTTGGA 59.649 61.111 11.40 0.00 43.01 3.53
3375 3725 2.034066 TGAAGCTTCGGCCCTTGG 59.966 61.111 21.11 0.00 43.01 3.61
3376 3726 3.583383 CTGAAGCTTCGGCCCTTG 58.417 61.111 21.92 2.38 43.01 3.61
3382 3732 2.048222 TGACGGCTGAAGCTTCGG 60.048 61.111 27.83 27.83 41.70 4.30
3383 3733 2.097038 CCTGACGGCTGAAGCTTCG 61.097 63.158 21.11 16.15 41.70 3.79
3384 3734 1.016653 GTCCTGACGGCTGAAGCTTC 61.017 60.000 19.89 19.89 41.70 3.86
3385 3735 1.004440 GTCCTGACGGCTGAAGCTT 60.004 57.895 0.00 0.00 41.70 3.74
3386 3736 1.548357 ATGTCCTGACGGCTGAAGCT 61.548 55.000 0.00 0.00 41.70 3.74
3387 3737 1.078848 ATGTCCTGACGGCTGAAGC 60.079 57.895 0.00 0.00 41.14 3.86
3388 3738 0.534412 AGATGTCCTGACGGCTGAAG 59.466 55.000 0.00 0.00 0.00 3.02
3389 3739 0.247460 CAGATGTCCTGACGGCTGAA 59.753 55.000 0.00 0.00 45.78 3.02
3390 3740 1.893062 CAGATGTCCTGACGGCTGA 59.107 57.895 0.00 0.00 45.78 4.26
3391 3741 1.812922 GCAGATGTCCTGACGGCTG 60.813 63.158 12.25 12.25 45.78 4.85
3392 3742 2.581354 GCAGATGTCCTGACGGCT 59.419 61.111 0.00 0.00 45.78 5.52
3393 3743 2.887568 CGCAGATGTCCTGACGGC 60.888 66.667 0.00 0.00 45.78 5.68
3394 3744 2.887568 GCGCAGATGTCCTGACGG 60.888 66.667 0.30 0.00 45.78 4.79
3395 3745 2.125952 TGCGCAGATGTCCTGACG 60.126 61.111 5.66 0.00 45.78 4.35
3396 3746 2.103042 GGTGCGCAGATGTCCTGAC 61.103 63.158 12.22 0.00 45.78 3.51
3397 3747 2.265739 GGTGCGCAGATGTCCTGA 59.734 61.111 12.22 0.00 45.78 3.86
3398 3748 2.046988 TGGTGCGCAGATGTCCTG 60.047 61.111 12.22 0.00 45.67 3.86
3399 3749 2.267006 CTGGTGCGCAGATGTCCT 59.733 61.111 12.22 0.00 0.00 3.85
3400 3750 2.046892 ACTGGTGCGCAGATGTCC 60.047 61.111 12.22 9.06 0.00 4.02
3401 3751 0.742281 ATGACTGGTGCGCAGATGTC 60.742 55.000 12.22 18.98 0.00 3.06
3402 3752 0.536724 TATGACTGGTGCGCAGATGT 59.463 50.000 12.22 9.88 0.00 3.06
3403 3753 1.328680 GTTATGACTGGTGCGCAGATG 59.671 52.381 12.22 6.07 0.00 2.90
3404 3754 1.656652 GTTATGACTGGTGCGCAGAT 58.343 50.000 12.22 0.00 0.00 2.90
3405 3755 0.391130 GGTTATGACTGGTGCGCAGA 60.391 55.000 12.22 0.00 0.00 4.26
3406 3756 1.369091 GGGTTATGACTGGTGCGCAG 61.369 60.000 12.22 0.60 0.00 5.18
3407 3757 1.376683 GGGTTATGACTGGTGCGCA 60.377 57.895 5.66 5.66 0.00 6.09
3408 3758 2.112815 GGGGTTATGACTGGTGCGC 61.113 63.158 0.00 0.00 0.00 6.09
3409 3759 1.451387 GGGGGTTATGACTGGTGCG 60.451 63.158 0.00 0.00 0.00 5.34
3410 3760 0.107165 GAGGGGGTTATGACTGGTGC 60.107 60.000 0.00 0.00 0.00 5.01
3411 3761 0.546598 GGAGGGGGTTATGACTGGTG 59.453 60.000 0.00 0.00 0.00 4.17
3412 3762 0.623617 GGGAGGGGGTTATGACTGGT 60.624 60.000 0.00 0.00 0.00 4.00
3413 3763 1.353394 GGGGAGGGGGTTATGACTGG 61.353 65.000 0.00 0.00 0.00 4.00
3414 3764 1.353394 GGGGGAGGGGGTTATGACTG 61.353 65.000 0.00 0.00 0.00 3.51
3415 3765 1.005690 GGGGGAGGGGGTTATGACT 59.994 63.158 0.00 0.00 0.00 3.41
3416 3766 3.670191 GGGGGAGGGGGTTATGAC 58.330 66.667 0.00 0.00 0.00 3.06
3431 3781 2.309504 GGTTGGGAGGAGAAGGGGG 61.310 68.421 0.00 0.00 0.00 5.40
3432 3782 1.229984 AGGTTGGGAGGAGAAGGGG 60.230 63.158 0.00 0.00 0.00 4.79
3433 3783 0.547712 TGAGGTTGGGAGGAGAAGGG 60.548 60.000 0.00 0.00 0.00 3.95
3434 3784 0.908198 CTGAGGTTGGGAGGAGAAGG 59.092 60.000 0.00 0.00 0.00 3.46
3435 3785 0.251634 GCTGAGGTTGGGAGGAGAAG 59.748 60.000 0.00 0.00 0.00 2.85
3436 3786 1.544825 CGCTGAGGTTGGGAGGAGAA 61.545 60.000 0.00 0.00 0.00 2.87
3437 3787 1.984570 CGCTGAGGTTGGGAGGAGA 60.985 63.158 0.00 0.00 0.00 3.71
3438 3788 1.544825 TTCGCTGAGGTTGGGAGGAG 61.545 60.000 0.00 0.00 0.00 3.69
3439 3789 0.909610 ATTCGCTGAGGTTGGGAGGA 60.910 55.000 0.00 0.00 0.00 3.71
3440 3790 0.035056 AATTCGCTGAGGTTGGGAGG 60.035 55.000 0.00 0.00 0.00 4.30
3441 3791 1.470098 CAAATTCGCTGAGGTTGGGAG 59.530 52.381 0.00 0.00 0.00 4.30
3442 3792 1.533625 CAAATTCGCTGAGGTTGGGA 58.466 50.000 0.00 0.00 0.00 4.37
3443 3793 0.109132 GCAAATTCGCTGAGGTTGGG 60.109 55.000 0.00 0.00 0.00 4.12
3444 3794 0.109132 GGCAAATTCGCTGAGGTTGG 60.109 55.000 0.00 0.00 0.00 3.77
3445 3795 0.883833 AGGCAAATTCGCTGAGGTTG 59.116 50.000 0.00 0.00 0.00 3.77
3446 3796 1.620822 AAGGCAAATTCGCTGAGGTT 58.379 45.000 0.00 0.00 0.00 3.50
3447 3797 1.620822 AAAGGCAAATTCGCTGAGGT 58.379 45.000 0.00 0.00 0.00 3.85
3448 3798 3.378112 TGATAAAGGCAAATTCGCTGAGG 59.622 43.478 0.00 0.00 0.00 3.86
3449 3799 4.621068 TGATAAAGGCAAATTCGCTGAG 57.379 40.909 0.00 0.00 0.00 3.35
3450 3800 4.036734 GGATGATAAAGGCAAATTCGCTGA 59.963 41.667 0.00 0.00 0.00 4.26
3451 3801 4.037208 AGGATGATAAAGGCAAATTCGCTG 59.963 41.667 0.00 0.00 0.00 5.18
3452 3802 4.210331 AGGATGATAAAGGCAAATTCGCT 58.790 39.130 0.00 0.00 0.00 4.93
3453 3803 4.574599 AGGATGATAAAGGCAAATTCGC 57.425 40.909 0.00 0.00 0.00 4.70
3454 3804 6.135290 TGAAGGATGATAAAGGCAAATTCG 57.865 37.500 0.00 0.00 0.00 3.34
3455 3805 8.823818 CAAATGAAGGATGATAAAGGCAAATTC 58.176 33.333 0.00 0.00 0.00 2.17
3456 3806 8.542080 TCAAATGAAGGATGATAAAGGCAAATT 58.458 29.630 0.00 0.00 0.00 1.82
3457 3807 8.081517 TCAAATGAAGGATGATAAAGGCAAAT 57.918 30.769 0.00 0.00 0.00 2.32
3458 3808 7.479352 TCAAATGAAGGATGATAAAGGCAAA 57.521 32.000 0.00 0.00 0.00 3.68
3459 3809 7.664552 ATCAAATGAAGGATGATAAAGGCAA 57.335 32.000 0.00 0.00 32.25 4.52
3460 3810 7.342541 TGAATCAAATGAAGGATGATAAAGGCA 59.657 33.333 0.00 0.00 33.60 4.75
3461 3811 7.719483 TGAATCAAATGAAGGATGATAAAGGC 58.281 34.615 0.00 0.00 33.60 4.35
3462 3812 9.692749 CATGAATCAAATGAAGGATGATAAAGG 57.307 33.333 0.00 0.00 33.60 3.11
3465 3815 8.853126 GGTCATGAATCAAATGAAGGATGATAA 58.147 33.333 0.00 0.00 35.87 1.75
3466 3816 7.173735 CGGTCATGAATCAAATGAAGGATGATA 59.826 37.037 0.00 0.00 35.87 2.15
3467 3817 6.016527 CGGTCATGAATCAAATGAAGGATGAT 60.017 38.462 0.00 0.00 35.87 2.45
3468 3818 5.297527 CGGTCATGAATCAAATGAAGGATGA 59.702 40.000 0.00 0.00 35.87 2.92
3469 3819 5.066893 ACGGTCATGAATCAAATGAAGGATG 59.933 40.000 0.00 0.00 35.87 3.51
3470 3820 5.066893 CACGGTCATGAATCAAATGAAGGAT 59.933 40.000 0.00 0.00 35.87 3.24
3471 3821 4.395854 CACGGTCATGAATCAAATGAAGGA 59.604 41.667 0.00 0.00 35.87 3.36
3472 3822 4.156556 ACACGGTCATGAATCAAATGAAGG 59.843 41.667 0.00 0.00 35.87 3.46
3473 3823 5.090757 CACACGGTCATGAATCAAATGAAG 58.909 41.667 0.00 0.00 35.87 3.02
3474 3824 4.759183 TCACACGGTCATGAATCAAATGAA 59.241 37.500 0.00 0.00 35.87 2.57
3475 3825 4.322567 TCACACGGTCATGAATCAAATGA 58.677 39.130 0.00 0.00 0.00 2.57
3476 3826 4.683501 TCACACGGTCATGAATCAAATG 57.316 40.909 0.00 0.00 0.00 2.32
3477 3827 5.163622 GGAATCACACGGTCATGAATCAAAT 60.164 40.000 0.00 0.00 0.00 2.32
3478 3828 4.155826 GGAATCACACGGTCATGAATCAAA 59.844 41.667 0.00 0.00 0.00 2.69
3479 3829 3.689161 GGAATCACACGGTCATGAATCAA 59.311 43.478 0.00 0.00 0.00 2.57
3480 3830 3.055167 AGGAATCACACGGTCATGAATCA 60.055 43.478 0.00 0.00 0.00 2.57
3481 3831 3.535561 AGGAATCACACGGTCATGAATC 58.464 45.455 0.00 0.00 0.00 2.52
3482 3832 3.634397 AGGAATCACACGGTCATGAAT 57.366 42.857 0.00 0.00 0.00 2.57
3483 3833 4.441792 CATAGGAATCACACGGTCATGAA 58.558 43.478 0.00 0.00 0.00 2.57
3484 3834 3.181466 CCATAGGAATCACACGGTCATGA 60.181 47.826 0.00 0.00 0.00 3.07
3485 3835 3.133691 CCATAGGAATCACACGGTCATG 58.866 50.000 0.00 0.00 0.00 3.07
3486 3836 2.104792 CCCATAGGAATCACACGGTCAT 59.895 50.000 0.00 0.00 33.47 3.06
3487 3837 1.484653 CCCATAGGAATCACACGGTCA 59.515 52.381 0.00 0.00 33.47 4.02
3488 3838 1.810412 GCCCATAGGAATCACACGGTC 60.810 57.143 0.00 0.00 33.47 4.79
3489 3839 0.180406 GCCCATAGGAATCACACGGT 59.820 55.000 0.00 0.00 33.47 4.83
3490 3840 0.180171 TGCCCATAGGAATCACACGG 59.820 55.000 0.00 0.00 33.47 4.94
3491 3841 1.875514 CATGCCCATAGGAATCACACG 59.124 52.381 0.00 0.00 33.47 4.49
3492 3842 2.936202 ACATGCCCATAGGAATCACAC 58.064 47.619 0.00 0.00 33.47 3.82
3493 3843 3.668141 AACATGCCCATAGGAATCACA 57.332 42.857 0.00 0.00 33.47 3.58
3494 3844 3.068590 CCAAACATGCCCATAGGAATCAC 59.931 47.826 0.00 0.00 33.47 3.06
3503 3853 1.078656 ACCCTAACCAAACATGCCCAT 59.921 47.619 0.00 0.00 0.00 4.00
3507 3857 2.295070 ACGAAACCCTAACCAAACATGC 59.705 45.455 0.00 0.00 0.00 4.06
3525 3875 6.919687 TTACGTTACTATTTGCGTTAACGA 57.080 33.333 31.03 11.31 41.62 3.85
3532 3882 5.961395 ACCTCATTACGTTACTATTTGCG 57.039 39.130 0.00 0.00 0.00 4.85
3573 3923 7.399245 AACAAAACTAGCAAAAGTCCTGTTA 57.601 32.000 9.71 0.00 34.73 2.41
3577 3932 5.186992 ACCAAACAAAACTAGCAAAAGTCCT 59.813 36.000 0.00 0.00 0.00 3.85
3611 3966 0.611714 GCCTTCTCCCTGTTCCGTTA 59.388 55.000 0.00 0.00 0.00 3.18
3622 3978 2.293677 TCTTCGATCGTATGCCTTCTCC 59.706 50.000 15.94 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.