>input_sequence_45555
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-----------ATGGGCACCATGACTCTGCCGCCCGGCTTCAGGTTCCACCCCACAGACGACGAGCTCGTCGGCTACTAC
CTCAAGCGGAGGGTCGACAACCTCAAGATCGAGCTCGAGGTCATCCCCGTCATCGACCTATACAAGTGCGAGCCATGGGA
GTTGCCAGG----TACATACACATGCATCTTCTATGCGATTCATTCTGTATTTCAACCAACATGCCACACATTCATTCAT
GCTTCGACTGACAAAAAAAGTGTGTGC--GAGCGAGTTGAATTCCCTTTTAGCTATGTCAAACCGCATGGTGTTTACCTT
TCTTTCCCCCCTGAATAGACAATTTATTTGATAAGTAATAATTTG---TCACCCTCGAATAGCATAATTCTTTTAGAAAA
AGAATCTGCCCTCCAAATTGCTTGCTAGCTAGCCAGCATACATGAAAAGGGACTTTGTGAAAGAGGCATCTCGCCTCATA
TATTCTCCATAACTTAGGCCGGTTGCAGATGAGTCATTTTCCCGCCTTTT-CCCAAAGAAACTTGTTCGCCAAATCACCA
CA---------------------GTCACCCCTCTCAATTTTGGAATATTCTCAACGGCCAATTACAGTAATCAGTACACA
GTTAATTCTGGCAT----AACCTTCTGTGCACTCAACTGTACATAGCTACTACTTCTAAAAAAAACATAGCTAGTTTGTA
CAGTGACCAATGTGAATGAGAATGCTAAGATTCAGAGCTGTGTGCGTTTGATCATTCTTCAGAGAAGTCGTTCCTGCCCA
AGAGGGACCTGGAGTGGTTCTTCTTCGTGCCGCGGGACCGCAAGTACCCCAACGGGTCGCGGACCAACCGGGCCACCACC
ACGGGGTACTGGAAGGCCACCGGCAAGGACCGCAAGGTGTCGTGCGACGGCGGCGCCGTCTGCGGCGTCAGGAAGACGCT
GGTGTTCTACAAGGGCCGGGCCCCCGGCGGCGAGCGCACCGACTGGGTCATGCACGAGTACCGCCTCTGCCAGGACCTCC
TCCACGGCGCCTCCAACTTCATCGGCGCCTACGCGCTCTGCCGCGTCATCAAGCGCACCGAGGCCGGCCTCCTGCACGGC
GACGCGGTTGCCAAGGCCAAGCCGGGCCACCAGCAGATGACCAAGGTTGGGAGCAGCTCCTCCCTGGTCACCACGGACCA
GCAGCTGAGCTCCCTCACGCCCAGCCCTCCGCGCCTCGACATCGTCGGCAACGCCTTCCAGCTTCACAGCTCCCCCTCTC
CCCTGTAC------GGAGGGGAGGTGATGTCCGGCATGGGTGCGCCCCTGGGGTTCCCGCAGCAGGACGCCGCCGGCACA
TTCTTCATCGACGGCGACCTCGCCGGCGCAGGCGAGACGACGCAGGCGCACATGCCTTTCTTCGACGACATGGGCGTGGT
CTCGGACCACGAGCTCAGATGGGACACCTTGCCGCTCTGCACTAACAACACCTTCTCCTCCACCGCCGGTACGTGCACTG
CTCTGC---TTCACGAGCTCGATCAATTCTTGAATCCTCCGTCGCCATT-CGCGCGAGTTCTCAATGCATAT-----GCA
TGTCCTTCTGCAGGCGCGGCGGAGCTTTGGAACCCGGCGGCACCGAACGCCGCCGCCCCGATGCTGTGCAGGGAGGCGAG
CGACGACCTGGCGGCGTTTTTCTCGTCCTTGGACGAAAACAACATGGTGGTCTACTGA----------------------
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>chr1B_1_TraesCS1B01G192200
GATGTGATTCGTGTAAAACCGACACGCTCACGACGAC---ACGAGTATGAACACATGAGGTGGAAAACAGAGTGGCGGTA
AGTTCTGGGAGCCTACCTGAATTCTGAAAACCGGTACGCGGCC------------------------------------G
AGGATGATAAACTTAATTAATCAACTGAACCGTAGGGGGCTAAGCACGGATCTTGGTGACAGCGGAATGAACCCATATTC
AAAACGAAAGCCCATATGA----AAACAAAACTGCACTTTCGAACCTCCG----CCGCCGCTGCTGCTGCGTCCCAGGGT
TCAGAAAAAAAAACACGGAAGAGGAAGAAATGAATAACGCATCATGATCATCA-----CCACGATACGCTTTGTACACGG
AATGAACACA-----CACG-TTTGGTTAGTGGTTAATTGCCCG----AGCCGCGAAAGAAAACGAAACGGGAAAAGAAGT
GCGGATTGCGAGACGGTTTGGCGGCTGCTTGCGGGCGCGACAAGCGCCGGCGGGGGTTTTGGAATGGCGTGCGTCGGACC
ACCTTCTCACCGCCTCTCGACCCTTTTCCCGTTGGC---TCCTCCTCCTCCTCTATATAAACGGCACCATGCCCGTCACT
TCATCCCTCCCCAA-------------CCTCCTCTCCCTCCTCCTCACTCCTCTCCAGCCGTCTTCGCCTTCCTCCCGCC
GCCA----ACGTCTCTG---------------------------------------------------------------
-------------------------------------------CTCTGGAGCTCGTGACCGGAGGATAATGAGCGTGAAT
CCTGGAGGCTGCTACACCGTATTCATCGCCAACAAGAGCTTCTACTTCTGGATCTTCCAAATCTTCAACCGATACGGCCT
CCTCTCCACCTGACTCCATTCCTTCACCTGGATTCTAGATTTCTAGTCCTGCCTCAAGTATTTGTGA-CGGCAGTTGACG
CTATATATATACATACATACAC----TTATTAGCTAGTCACAGCGCAAGCTTAAG---CATCATCTGCTCCTCCTGG---
---GTTGGG-----CTGGGTTACTGTTGGATCGAACTGTCCAAGATATTTGAATTGGCTGCAAGTTTCACACAAGCAAGC
AA----CGGGCATGGGCACCATGACTCTGCCGCCCGGCTTCAGGTTCCACCCCACAGACGACGAGCTCGTCGGCTACTAC
CTCAAGCGGAGGGTCGACAACCTCAAGATCGAGCTCGAGGTCATCCCCGTCATCGACCTATACAAGTGCGAGCCATGGGA
GTTGCCAGG----TACATACACATGCATCTTCTATGCGATTCATTCTGTATTTCAACCAACATGCCACACATTCATTCAT
GCTTCGACTGACAAAAAAAGTGTGTGC--GAGCGAGTTGAATTCCCTTTTAGCTATGTCAAACCGCATGGTGTTTACCTT
TCTTTCCCCCCTGAATAGACAATTTATTTGATAAGTAATAATTTG---TCACCCTCGAATAGCATAATTCTTTTAGAAAA
AGAATCTGCCCTCCAAATTGCTTGCTAGCTAGCCAGCATACATGAAAAGGGACTTTGTGAAAGAGGCATCTCGCCTCATA
TATTCTCCATAACTTAGGCCGGTTGCAGATGAGTCATTTTCCCGCCTTTT-CCCAAAGAAACTTGTTCGCCAAATCACCA
CA---------------------GTCACCCCTCTCAATTTTGGAATATTCTCAACGGCCAATTACAGTAATCAGTACACA
GTTAATTCTGGCAT----AACCTTCTGTGCACTCAACTGTACATAGCTACTACTTCTAAAAAAAACATAGCTAGTTTGTA
CAGTGACCAATGTGAATGAGAATGCTAAGATTCAGAGCTGTGTGCGTTTGATCATTCTTCAGAGAAGTCGTTCCTGCCCA
AGAGGGACCTGGAGTGGTTCTTCTTCGTGCCGCGGGACCGCAAGTACCCCAACGGGTCGCGGACCAACCGGGCCACCACC
ACGGGGTACTGGAAGGCCACCGGCAAGGACCGCAAGGTGTCGTGCGACGGCGGCGCCGTCTGCGGCGTCAGGAAGACGCT
GGTGTTCTACAAGGGCCGGGCCCCCGGCGGCGAGCGCACCGACTGGGTCATGCACGAGTACCGCCTCTGCCAGGACCTCC
TCCACGGCGCCTCCAACTTCATCGGCGCCTACGCGCTCTGCCGCGTCATCAAGCGCACCGAGGCCGGCCTCCTGCACGGC
GACGCGGTTGCCAAGGCCAAGCCGGGCCACCAGCAGATGACCAAGGTTGGGAGCAGCTCCTCCCTGGTCACCACGGACCA
GCAGCTGAGCTCCCTCACGCCCAGCCCTCCGCGCCTCGACATCGTCGGCAACGCCTTCCAGCTTCACAGCTCCCCCTCTC
CCCTGTAC------GGAGGGGAGGTGATGTCCGGCATGGGTGCGCCCCTGGGGTTCCCGCAGCAGGACGCCGCCGGCACA
TTCTTCATCGACGGCGACCTCGCCGGCGCAGGCGAGACGACGCAGGCGCACATGCCTTTCTTCGACGACATGGGCGTGGT
CTCGGACCACGAGCTCAGATGGGACACCTTGCCGCTCTGCACTAACAACACCTTCTCCTCCACCGCCGGTACGTGCACTG
CTCTGC---TTCACGAGCTCGATCAATTCTTGAATCCTCCGTCGCCATT-CGCGCGAGTTCTCAATGCATAT-----GCA
TGTCCTTCTGCAGGCGCGGCGGAGCTTTGGAACCCGGCGGCACCGAACGCCGCCGCCCCGATGCTGTGCAGGGAGGCGAG
CGACGACCTGGCGGCGTTTTTCTCGTCCTTGGACGAAAACAACATGGTGGTCTACTGAAGCTCAGATTTCACAACCAAGA
TCGTG--GTAGTAATTTCGGCAACAGAGGAAATAATTCCAGAAACCTAATTGCTCTCGGCAACGGCGGTATATTTTTAGC
CAGTGTAC-GGGTCGTATACCGTAT---GTGTAAGCGTACGTAGTACTGTGTGTCA-----GTGTGTGTGTGTC------
--TTGTACTCGGAGTGACGGCCTATTTTAGCACTGTCTTCTCACGCTGTGGCACGACACTTCCTTC----TCTTTACTGT
GACTCAGTCTCTGTACTAGCTGCTGA--------------------------ATATGTTGTGCTCCCATTTCGGG-GATG
TAAAATTCCCCATTGCTATTATACAATAGTATAAAATTCCC--------------------------------------C
ATTGATTGATGCAGAGGGTCATGAATTGTTATTTTTTCAAACGCAAGTTTTATTCATTTGAAATAACCATTACATCATTT
ACGAGGATTGGTACGATTTCATTTAAAGGCTCTCAAACCAAATAAAAGTTAAAGAGAACCTAGCCAACCTAGCAAGCTCA
TGAGCAACTTTATTTGCTTCTCTATTACAATGCTCGAATCTAGAAATAAGGAAATCACAAGCAAAATGGAAACATTCATG
AAAAAATTACCGCCGCCACACTTGTCAATCGTCCTTCATCCTTCATTATATCAATCATCTTCAGATTGTCGAGTTAATAA
CAAGGTGATTGCAACCCGCCCTTTGCTCAAGTGATAGACCAAATCCAAGGGCCGAAGCTTCAGCCGTCAGGACATCTGCG
CACCAGTCATAACCCCCTCCCCCCCTTCTCCTCCCAACCTCAGCGAATTTGCCTTTATCATCCTTCATTTGATTCATGAC
CGTGTGATTCCTATGGGCATGTTTGGTTAGGGTTTCGTTAACGCAAATAGTAACGTAATGAGGTTACACCACATTGTGGA
TGT-----AACAGGACTTTTGCTAGTTTTGTTTGGTTGACTCAGGTAAC-GGAACAGGGAGAAGGCATACGATCGAAGAG
ATAGGAAAAAAAACTATAAGTAGGGTTGCTCA
>chr1A_1
GATGGGATTCGTGTAAAACAGACACGCTCACGACGACGACACGAGTATGAACACATGAGCTGGAAAACAGAGTGGCGGTA
AGTCCTGGGAGCCTACCTGAATTCCGAAAACCGGTACGCGGCC------------------------------------G
AGGATGATAAACTTAATTAATCAACTTAAGCCAAGGGGGCTAAGCACGGATCTTGGTGACAGCGGAATGAACCCATATTC
AAAACCAAAGCCCATATGA----AAACAAAACTGCACTTTCGAACCTCCGCCCGCCGCCGCCGCTGCTGCGCCTCAGGGT
TCAGA-------------------AAGAAATGAATAACGCATCCTGATCATCGCGTCGCCACGATACGCCCTGCACACGG
AACGGAACGGCCAGGCACG-TTTGGTTAGTGGTGAATTGCCCAAGCAAGCCGCGAAAGAAAACGAAACGGGAAAAGAAGT
GCGGATTGCGAGACGGTTTGGCGGCGGCTTGGGCGCGCGACAAGCGCCGGCGGGGGTTTTGGAATGGCGTGCGCCCGACC
ACCTTCTCACCGCCTCTCCACCCTTTTCCCGTTGGCTTCTCCTCCTCGTCCTCTATATAAACGGCACCATGCCCGTCACT
TCATCCCTCCCCAA-------------CCTCCTCTCCCTCCTCCTCAGTCCTCTCCAGCCGTCTTCGCCTTCCTCCCGCC
CGCCGCGGACGCCTCTG---------------------------------------------------------------
-------------------------------------------CTCTGGAGCTCGTGACCGGAGGATAATGAGCGTGAAT
CCTGGAGGCTGCTACACCGTATTCATCGCCAACAAGAGCTTCTACTTCTGGATCTTCCAAATCTTCAACCGATACGGCCT
CCTCTCCACCTGACTCCGTTCCGCCTCCTGGATTCTAGATCTCTAGTCCTGCCTCGAGTATTTGTGATCGGCAGTTGACG
CTACATATATACATACATACACACAGTTATTAGCTAGTCACAGCGCAAGCTTAAGTAGCATCATCTGCTCCTCCTGG---
---GTTGGGTTGGGCTGGGTTACTGTCGGATCGAACTGCCCAAGATATTTGAATTGGCTGCAAGTTTCACACAAGCAAGC
AAGCAACGAGCATGGGCACCATGACCCTGCCGCCCGGCTTCAGGTTCCACCCCACCGACGACGAGCTCGTCGGCTACTAC
CTCAAGCGGAGGGTCGACAACCTCAAGATCGAGCTCGAGGTCATCCCCGTCATCGACCTCTACAAGTGCGAGCCATGGGA
GTTGCCAGGTACATACATACACATGCATCTTCCATCCGATTCATTCTGTATTT----CAACATGCCACACATTCATTCAT
GCTTCGACCGACAAAAAAAGTGTTCGAGAG----AGTTGAA-----TTTTACCTATGTCAAACCGCATGGTGTTCACCTT
TCTTCT-CCCCTGAATAGACAATTTATTTGACAAGTAATAATTTGCCATCATCCTCGAATCGCATAATTCTTTTAGAAAA
AGAATCTGCCCTCCAAATTGCTTGCTAGCTAGCCAGCATACATGAAAAGGGACTTTGTGAAAGAGGCATCTCGCCTCATA
TATTCTCCATAACTTAGGCCGGTTGCAGATGAGTCATTTTCCCGCCTTTTTCCCAAAGAAACTTGTTCTCCAAATCACCA
CA---------------------GCCACCCCTCTCAATTTTGGAATATTCTCAGCAGCCAATCACAGTAATCAGCACACT
GTTAACTCTGGCAT----AACCTTCTCTGCACTCAACTGTAC------------------------ATAGCTAGTTTGTA
CAGTGGCCAATGTGAATGAGAATGCTGAGATTCAGAGGTGTGTGCGTTTGATGATTCTTCAGAGAAGTCGTTCCTGCCCA
AGAGGGACCTGGAGTGGTTCTTCTTCGTGCCGCGGGACCGCAAGTACCCCAACGGGTCGCGCACCAACCGGGCCACCACC
ACGGGCTACTGGAAGGCCACCGGCAAGGACCGCAAGGTGTCGTGCGACGGCGGCGCCGTGTGCGGCGTCAGGAAGACGCT
GGTGTTCTACAAGGGCCGGGCCCCCGGCGGCGAGCGCACCGACTGGGTGATGCACGAGTACCGCCTCTGCCAGGACCTCC
TCCACGGCGCCTCCAACTTCATCGGCGCCTACGCGCTCTGCCGCGTCATCAAGCGCACCGAGGCCGGCCTCCTCCACGGC
GACGCGGCCGCCAAGGCGAGGCCGGGCCACCGGCAGATGAGCAAGGTCGGGAGCAGCTCGTCGCTGGTCACCACGGACCA
GCAGCTGGGCTCCCTCACGCCCAGCCCGCCGCGCCTCGACATCGTCGGCAACGCCTTCCAGCTCCACAGCTCCCCCTCTC
CCCTGTACGGAGGAGGAGGGGAGGTGGTGTCCGGCATGGGCACGCCTCTGGGGTTCCCGCAGCAGGACGCCGCCGCCACA
TTCTTCATCGACGGCGACTTCGCCGGCGCAGGCGAGACGACGCAGTCGCACATGCCCTTCTTCGGCGACATGGGCGTGGT
CTCGGACCACGAGCTCAGATGGGACACCTTGCCGCCCTGCGCCAACAGCACCTTCTCCACCACCGCCGGTACGCGCACTG
ATGCTCTGCCTCACGAGCTCGATCAATTCTTGAATCCCCCGTCGCCATTTCGCGCGAGTTCTCAATGCATAT-----GCA
TGTCCTTCTGCAGGCGCGGCGGAGCTGTGGAACCCGGCGGCACCGAACGCCGCCGCCCCGATGCTGTGCAGGGAGGCGAG
CGACGACCTGGCGGCGTTTTTCTCGTCCTTGGACGAGAACAACATGGTGGTCTACTGAAGCTCTCGTTTCACACCCAAGA
AAAGATCGTAGTAATTTCGGCAACAGAGGAAATAATTCCAGAAACCTAATTGCTCTCGGCAACGGCGGTATATTTTCAGC
CAGTGTACGGGGTCGTATACCGTATGATATGTAAGAGTACGTAGTATTGCTACGCGCGCGTGTGTGTGTGTGTCTTGTAC
AGTTGTACTCGGAGTGACGGCCTATTTTAGCACTGTCTTCTCTCGCTGTGGCACGACACTTCCATCTCTTCCTTTACTGT
GATTCAGTCTCTGTACTAGCTGCTG-------------------------------------------------------
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>chr1D_40
------------------------------------------GAGCATGAACACATGAGCTGGAAAACAGAGTAGCGGTA
AGTTCTGGGAGCCTACCTGAATTCTGAAAACCGGCCCCCGCAAAAAAAAAGGAATTCTGAAAACCGGTACGCGGCTGATG
ATGATGATAAACTTAGTTAATCAGCTGAACCGAAGGGGGCTAAGCACGGATCTTGGTGACAGCGGAGTGAACCCATATTC
AAAACCAAAGCACGTACAGTATGAAACAAAACGGCACTTTCGAACCTTGCCGCCGC-------CTGCCGCGCCTCGCGAT
TCAGA-------------------AGAAGAATAACGCA-----------------TCGCCACGATACGCCCTGCACACGG
AACGGAACGGCCAGACACGTTTTAGTTAGTGGTGAATTGCCCGAGCAAGCAGCGAAAGGAAATGAAACGGGAAAAGAAGT
GCGGATTGCGGGACGGTTTGGCGGCGGCTTGCGGGCACGACAAGCGCCGGCGGGGGTTTTGGAATGGCGTGCCTCGGACG
ACCTTCTCGCCTCGCAAGTCTCAAACCCTTTC--------------CCTCCTCTATATAAACGGCACCACGCCCTTCACT
TCCTCCCTCCCCAATCCAGCGCCTCCTCCTCCTCCTCCTCCTCCTC------CTCCGGCCATCCCCGCCTTCCTCCCGCC
GCCA----ACATCTCTAGCTAGCTCCACCTTCTTACTCACCGTGCGCTTGACCGATCCTCACAATCAATCAAGCTCTTTA
GCTAGCGCCCTGTTAGTTGGCCACCATTCCTGTTCCATCAAGTCTCTGGAGCTCGTGACCGGAGGATAATGAGCGTGAAT
CCTGGAGGCTGCTACACCGTATTCATCGCCAACAAGAGCTTCTACTTCTGGATCTTCCAAATCTTCAACCGATACGGCCT
CCTCTCCACCTGACTCCATTCCTTCACCTGGATTCTAGATCTCTAGTCCTGCCTCAAGTATTTGTGATCGGCAGTTGACG
CTATATATATACATACATACACACAGTTATTAGCTAG---------------------CATCATCTGCTCCTCCTGGTCC
TGGGTTGGG-----CTGGGTTACTGTTGGATCGAACTGCCCAAGATATTTGAATTGGCTGCAAGTTTCACACAAGCAAGC
AA----CGAGCATGGGCACCATGACTCTGCCGCCCGGCTTCAGGTTCCACCCCACCGACGACGAGCTCGTCGGCTACTAC
CTCAAGCGGAGGGTCGACAACCTCAAGATCGAGCTCGAGGTCATCCCCGTCATCGACCTCTACAAGTGCGAGCCATGGGA
GTTGCCAGGTACATACATA-ACGTGCATCTTCTATCCGATTCATTCTGTATTT----CAACATGCCACACGTTCATTCAT
GCTTCGGCCGACAAAAAAAGTGTGCGAGAGAGAGAGTTGAA-----TTTTAGCTATGTCAAACCGCATGGTGTTCACCTC
TCCTTTCCCCCTGAATAGACAATTTATTTGATAAGTAATAATTTGCAATCATCCTCGAATAGCATAATTCTTTTAGAAAA
AGAATCTGCCCTCCAAATTGCTTGCTAGCTAGCCAGCATACACGAAAAGGGACTTTGTGGAAGAGGCATCTCGCCTCATA
TATTCTCCATAACTTAGGCCGGTTGCAGATGAGTCATTTTCCCGCC-TTTTCCCAAAGAAACTTGTTCTCCAAATCACCA
CAAGAAATAAATTAGTAAAGCCAGTCACCCCTCTCGCTTTTGGAATATTCTCAACAGCCAATTACAGTAATCAGTACGCA
GTTAACTCTGGCATTCCTAACCTTCTCTGCACTCAACTATACAAACTGG-------------------------------
--------AATGAGAATGAGAATGCTAAGATTCAGAGTTGTGTGTGTTTGATCATTCTTCAGAGAAGTCGTTCCTGCCCA
AGAGGGATCTGGAGTGGTTCTTCTTCGTGCCGCGGGACCGCAAGTACCCCAACGGGTCGCGGACCAACCGGGCCACCACC
ACGGGGTACTGGAAGGCCACCGGCAAGGACCGCAAGGTGTCGTGCGACGGCGCCGCCGTGTGCGGCGTCAGGAAGACGCT
GGTGTTCTACAAGGGCAGGGCCCCCGGCGGCGAGCGCACCGACTGGGTCATGCACGAGTACCGCCTCTGCCAGGACCTCC
TCCACGGCGCCTCCAACTTCATCGGCGCCTACGCGCTCTGCCGCGTCATCAAGCGCACCGAGGCCGGCCTCCTGCACGGC
GACGCGGCTGCCAAGGCGAGGCCGGGCCACCAGCAGATGAGCAAGGTCGGGAGCAGCTCCTCCCTGGTCACCACGGACCA
GCAGCTGAGCTCCCTCACGCCCAGCCCTCCGCGCCTCGACATCGTCGGCAACGCCTTCCAGCTTCACAGCTCCCCCTCTC
CCCTGTAC------GGAGGGGAGGTGGTGTCCGGGATGGGCGCGCCTCTGGGGTTCCCGCAGCAGGACGCCGCCGCCACA
TTCTTCATCGACGGCGACCTCGCCGGCGCAGGCGAGACGACGCAGGCGCACATGCCTTTCTTCGACGACATGGGCGTGGT
CTCGGACCACGAGCTCAGATGGGACACCTTGCCGCTCTGCACCAACAACGCCTTCTCCACCACGGCCGGTACGTGCAC--
-TGCTCTGCTTCACGAGCTCGATCAATTCTTGAATCCCCCGTCGCCATTTTGCGCGAGTTCTCAATGCATATCATATGCA
TGTCCTTCTGCAGGCGCGGCGGAGCTCTGGAACCCGGTGGCACCGAACGCCGCCGCCCCGATGCTGTGCAGGGAGGCCAG
CGACGACCTGGCGGCGTTTTTCTCGTCCTTGGACGAAAACAACATGGTGGTCTACTGAAGCTCTCGTTTCACACCCAAGA
AAAGATCGTAGTAATTTCGGCAACAGAGGAAATAATTGCAGAAACCTAATTGCTCTCGGCAACGGCGGTATATTTTCAGC
CAGTGTAC-GGGTCGTATACCGTAT---ATGTAAGAGTACGTAGTATTGCTACGCATGTGTGTGTGTGTGTGTC------
--TTGTACTCGGAGTGACGGCCTATTTTAGCACTGTCTTCTCTCGCTGTGGCACGACACTTCCATCTCTTTCTTTACTGT
GATTCAGTCTCTGTACTAGCTGCTGCTGCTGCTGCAATTTACGCAGCAATATATATGTTGTGCTCCCATTTCGGGCGATG
TAAAATTCCCCATGGCTATTAATATTAATATATTATACAATATAACCTTCTTTAGAAAATGGAGGATACATCATCTATGC
ATTGGTTGATGCACAGGGTCGTGAATCTCATT------------------------------------------------
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----TGATTCCTGTGGACATGTTTGGTTAGGGTTACGTTAATGCAAACGGTGACGTAATGAGGTTACACTACATTGTGGA
TGCAATGCAACGGGACTTTTGCTAGTTTTGTTTGGTTGACTCAGGCAACAGGAACAGAGAGAAGG---------------
--------------------------------
>SNPs
----S--------------S---------------------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
-----S-------------------------------------------------------S---------S-S------
-----SSSSSSSSSSSSSSSSSSS-------------------S--------S----------------SS--S------
--S-S-SSSS-----------------------S----------------------------------------------
-------------------------S------------------------------------------------------
------------------S-------------------------------------------------------------
-----------------------------------------------S--------------------------------
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----------------------------------------S---------------------------------------
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--------------------------------------S-----------------------------------------
--------S----------------------------------------------S------------------------
-----------------------------------------------------------S--------------------
-----------------------------------S-----------------SSSS-----------------------
--------S---------------S-S-----S--------SSSSS----------------------------S-----
-----S---------------------------------------------S----------------------------
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--------------------------------------------------------------------S-----------
-------------------------------------------------------S------------------------
-----S--------------------S----------------S-SSSSSSSSSSSSSSSSSSSSS--------------
-----S-------------------------------S------------------------------------------
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-----------------------------------------------------------S--------------------
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-------S---------S-S--------------------S------S--------------------------------
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--------------------------S-------------S-----S----------------------------S----
--------------------------------------------------------------------------------
------------------------------------------S---------------S---------------------
S-SSS--------------------------------S------------------------------------------
--------------------------S-----------------------------------------------------
---------------------------------------------------------------SSS-------S------
SSSSS-----------------------------------------------------------------------S---
----------------------------S------S----------S--SSSSS--------------------------
------------------------------------------S--------------------S----------------
--S----------------------S------------------------------------------------------
-------------S-------SSSSSS-SSSSSS-SSSSSS---------------------------------------
----S--------S------S-----SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS--------S---S-----------------S------S-----SS--S-----------------S----------
--S--------S---------------------------------S-----------S-------SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1209
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---------------------------------------------------------------------TTCACACAAGC
AAGCAACGG-----------------------------------------------------------------------
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>reverse_2556
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------GCACA
TTCTTCATCGACGGC-----------------------------------------------------------------
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>forward_1485
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-------------------------GTGCGAGCGAGTTGAATTCC-----------------------------------
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>reverse_3037
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----------------------------------------------------------------------------TAGC
CAGTGTACGGGTCGTA----------------------------------------------------------------
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