Multiple sequence alignment - TraesCS1B01G136100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G136100 chr1B 100.000 2981 0 0 1 2981 173596161 173599141 0.000000e+00 5505
1 TraesCS1B01G136100 chr1B 83.905 379 47 7 1615 1983 172946738 172947112 1.700000e-92 350
2 TraesCS1B01G136100 chr1D 94.217 1781 57 16 577 2330 113847528 113849289 0.000000e+00 2676
3 TraesCS1B01G136100 chr1D 93.562 233 15 0 1617 1849 113571983 113572215 6.120000e-92 348
4 TraesCS1B01G136100 chr1D 92.275 233 18 0 1617 1849 113598160 113598392 6.160000e-87 331
5 TraesCS1B01G136100 chr1D 88.835 206 13 6 2523 2721 113850047 113850249 8.250000e-61 244
6 TraesCS1B01G136100 chr1D 90.756 119 9 2 460 576 113781965 113782083 1.110000e-34 158
7 TraesCS1B01G136100 chr1A 94.395 1017 38 6 474 1475 121567262 121568274 0.000000e+00 1544
8 TraesCS1B01G136100 chr1A 94.466 759 36 2 1575 2333 121568276 121569028 0.000000e+00 1164
9 TraesCS1B01G136100 chr1A 84.211 380 44 9 1615 1983 120378648 120379022 3.650000e-94 355
10 TraesCS1B01G136100 chr1A 93.133 233 16 0 1617 1849 120364829 120365061 2.850000e-90 342
11 TraesCS1B01G136100 chr1A 92.632 190 14 0 45 234 121567061 121567250 1.050000e-69 274
12 TraesCS1B01G136100 chr5B 96.250 240 8 1 232 470 425712668 425712429 2.790000e-105 392
13 TraesCS1B01G136100 chr5B 89.837 246 22 2 2736 2978 282017730 282017975 2.230000e-81 313
14 TraesCS1B01G136100 chr5B 89.516 248 16 6 232 477 640427652 640427413 3.730000e-79 305
15 TraesCS1B01G136100 chr2B 95.142 247 10 2 232 477 664409545 664409300 3.600000e-104 388
16 TraesCS1B01G136100 chr2B 90.040 251 22 3 2734 2981 695691797 695691547 3.710000e-84 322
17 TraesCS1B01G136100 chr2B 90.000 250 21 3 2735 2981 435482330 435482578 1.330000e-83 320
18 TraesCS1B01G136100 chr2B 94.706 170 9 0 2331 2500 472909620 472909789 6.340000e-67 265
19 TraesCS1B01G136100 chr2D 90.588 255 20 3 2731 2981 443730816 443731070 4.760000e-88 335
20 TraesCS1B01G136100 chr6D 90.040 251 21 4 2734 2981 11684310 11684061 3.710000e-84 322
21 TraesCS1B01G136100 chr6D 90.040 251 22 3 2734 2981 390167938 390167688 3.710000e-84 322
22 TraesCS1B01G136100 chr4A 90.040 251 22 3 2734 2981 731090488 731090738 3.710000e-84 322
23 TraesCS1B01G136100 chr4A 96.988 166 5 0 2331 2496 665604286 665604121 2.260000e-71 279
24 TraesCS1B01G136100 chr4A 87.347 245 26 5 229 470 615001088 615001330 2.930000e-70 276
25 TraesCS1B01G136100 chr5D 89.558 249 21 4 2734 2978 486750109 486750356 8.020000e-81 311
26 TraesCS1B01G136100 chr7B 89.200 250 24 3 2735 2981 192524465 192524216 2.890000e-80 309
27 TraesCS1B01G136100 chr3B 90.795 239 11 6 233 470 225459059 225459287 2.890000e-80 309
28 TraesCS1B01G136100 chr3B 94.554 202 8 3 274 474 536413309 536413508 2.890000e-80 309
29 TraesCS1B01G136100 chr3B 94.318 176 9 1 2331 2505 755167396 755167571 4.900000e-68 268
30 TraesCS1B01G136100 chr3B 91.329 173 15 0 1616 1788 139505438 139505266 1.380000e-58 237
31 TraesCS1B01G136100 chr3A 88.048 251 17 9 232 479 456702012 456701772 4.860000e-73 285
32 TraesCS1B01G136100 chr5A 88.430 242 16 8 232 470 645732584 645732816 6.290000e-72 281
33 TraesCS1B01G136100 chr6B 96.407 167 6 0 2330 2496 147089605 147089439 2.930000e-70 276
34 TraesCS1B01G136100 chr2A 86.853 251 23 6 232 479 103366656 103366413 3.790000e-69 272
35 TraesCS1B01G136100 chrUn 95.210 167 8 0 2330 2496 321005256 321005422 6.340000e-67 265
36 TraesCS1B01G136100 chrUn 95.210 167 8 0 2330 2496 450105847 450106013 6.340000e-67 265
37 TraesCS1B01G136100 chrUn 95.181 166 8 0 2330 2495 302653104 302653269 2.280000e-66 263
38 TraesCS1B01G136100 chrUn 95.181 166 8 0 2330 2495 304066305 304066470 2.280000e-66 263
39 TraesCS1B01G136100 chrUn 95.181 166 8 0 2330 2495 304070709 304070874 2.280000e-66 263
40 TraesCS1B01G136100 chr3D 91.329 173 15 0 1616 1788 90255923 90255751 1.380000e-58 237


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G136100 chr1B 173596161 173599141 2980 False 5505 5505 100.000 1 2981 1 chr1B.!!$F2 2980
1 TraesCS1B01G136100 chr1D 113847528 113850249 2721 False 1460 2676 91.526 577 2721 2 chr1D.!!$F4 2144
2 TraesCS1B01G136100 chr1A 121567061 121569028 1967 False 994 1544 93.831 45 2333 3 chr1A.!!$F3 2288

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
272 273 0.033011 ACGAGCTGGATGTACCTCCT 60.033 55.0 16.94 0.00 39.86 3.69 F
370 371 0.107897 TTACAGCCATGGCACTACGG 60.108 55.0 37.18 20.38 44.88 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1794 1823 0.180171 CGGCCATGGTGAAGGTATGA 59.820 55.0 14.67 0.0 0.0 2.15 R
2215 2244 0.447801 GAGCAACAAGTGTATGGCGG 59.552 55.0 0.00 0.0 0.0 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.189342 CTTCTCGATCTTTCAGTCGCC 58.811 52.381 0.00 0.00 37.74 5.54
21 22 0.098905 TCTCGATCTTTCAGTCGCCG 59.901 55.000 0.00 0.00 37.74 6.46
22 23 0.179161 CTCGATCTTTCAGTCGCCGT 60.179 55.000 0.00 0.00 37.74 5.68
23 24 0.179171 TCGATCTTTCAGTCGCCGTC 60.179 55.000 0.00 0.00 37.74 4.79
24 25 1.140407 CGATCTTTCAGTCGCCGTCC 61.140 60.000 0.00 0.00 0.00 4.79
25 26 0.806492 GATCTTTCAGTCGCCGTCCC 60.806 60.000 0.00 0.00 0.00 4.46
26 27 2.558554 ATCTTTCAGTCGCCGTCCCG 62.559 60.000 0.00 0.00 0.00 5.14
40 41 1.827394 TCCCGCGGGAATAAGAAGG 59.173 57.895 43.93 14.71 42.05 3.46
41 42 0.979187 TCCCGCGGGAATAAGAAGGT 60.979 55.000 43.93 0.00 42.05 3.50
42 43 0.814010 CCCGCGGGAATAAGAAGGTG 60.814 60.000 41.82 6.56 37.50 4.00
43 44 0.814010 CCGCGGGAATAAGAAGGTGG 60.814 60.000 20.10 0.00 0.00 4.61
49 50 3.073062 CGGGAATAAGAAGGTGGATGGAT 59.927 47.826 0.00 0.00 0.00 3.41
53 54 1.302907 AAGAAGGTGGATGGATGGCT 58.697 50.000 0.00 0.00 0.00 4.75
73 74 1.302907 AAGGAACAGGGAGCATGGAT 58.697 50.000 0.00 0.00 0.00 3.41
102 103 3.987404 GTGCCATCAAGGAACGCT 58.013 55.556 0.00 0.00 35.78 5.07
104 105 2.334946 TGCCATCAAGGAACGCTGC 61.335 57.895 0.00 0.00 41.22 5.25
107 108 1.741401 CATCAAGGAACGCTGCGGA 60.741 57.895 26.95 12.74 0.00 5.54
161 162 0.037697 TTCGTCAACCTCACCATCCG 60.038 55.000 0.00 0.00 0.00 4.18
162 163 1.447838 CGTCAACCTCACCATCCGG 60.448 63.158 0.00 0.00 38.77 5.14
165 166 3.000819 AACCTCACCATCCGGCGA 61.001 61.111 9.30 0.00 34.57 5.54
173 174 0.179084 ACCATCCGGCGACTAACATG 60.179 55.000 9.30 0.00 34.57 3.21
223 224 8.350722 AGATGCAAGCATTTTCACTAATCTATG 58.649 33.333 9.16 0.00 36.70 2.23
243 244 9.833917 ATCTATGATATTATGCAGGATGACAAG 57.166 33.333 0.00 0.00 39.69 3.16
245 246 6.438186 TGATATTATGCAGGATGACAAGGA 57.562 37.500 0.00 0.00 39.69 3.36
246 247 7.024345 TGATATTATGCAGGATGACAAGGAT 57.976 36.000 0.00 0.00 39.69 3.24
247 248 6.882678 TGATATTATGCAGGATGACAAGGATG 59.117 38.462 0.00 0.00 39.69 3.51
248 249 1.688772 ATGCAGGATGACAAGGATGC 58.311 50.000 0.00 0.00 39.69 3.91
249 250 0.622136 TGCAGGATGACAAGGATGCT 59.378 50.000 0.00 0.00 39.69 3.79
250 251 1.839354 TGCAGGATGACAAGGATGCTA 59.161 47.619 0.00 0.00 39.69 3.49
251 252 2.440627 TGCAGGATGACAAGGATGCTAT 59.559 45.455 0.00 0.00 39.69 2.97
252 253 3.117776 TGCAGGATGACAAGGATGCTATT 60.118 43.478 0.00 0.00 39.69 1.73
253 254 4.102996 TGCAGGATGACAAGGATGCTATTA 59.897 41.667 0.00 0.00 39.69 0.98
254 255 4.453819 GCAGGATGACAAGGATGCTATTAC 59.546 45.833 0.00 0.00 39.69 1.89
255 256 4.687948 CAGGATGACAAGGATGCTATTACG 59.312 45.833 0.00 0.00 39.69 3.18
256 257 4.588951 AGGATGACAAGGATGCTATTACGA 59.411 41.667 0.00 0.00 0.00 3.43
257 258 4.926238 GGATGACAAGGATGCTATTACGAG 59.074 45.833 0.00 0.00 0.00 4.18
258 259 3.717707 TGACAAGGATGCTATTACGAGC 58.282 45.455 0.00 0.00 43.16 5.03
259 260 3.384789 TGACAAGGATGCTATTACGAGCT 59.615 43.478 0.00 0.00 43.27 4.09
260 261 3.722147 ACAAGGATGCTATTACGAGCTG 58.278 45.455 0.00 0.00 43.27 4.24
261 262 3.062763 CAAGGATGCTATTACGAGCTGG 58.937 50.000 0.00 0.00 43.27 4.85
262 263 2.598565 AGGATGCTATTACGAGCTGGA 58.401 47.619 1.44 0.00 43.27 3.86
263 264 3.169099 AGGATGCTATTACGAGCTGGAT 58.831 45.455 1.44 0.00 43.27 3.41
264 265 3.056250 AGGATGCTATTACGAGCTGGATG 60.056 47.826 1.44 0.00 43.27 3.51
265 266 3.306364 GGATGCTATTACGAGCTGGATGT 60.306 47.826 1.44 0.00 43.27 3.06
266 267 4.082190 GGATGCTATTACGAGCTGGATGTA 60.082 45.833 1.44 0.00 43.27 2.29
267 268 4.238761 TGCTATTACGAGCTGGATGTAC 57.761 45.455 1.44 0.00 43.27 2.90
268 269 3.005472 TGCTATTACGAGCTGGATGTACC 59.995 47.826 1.44 0.00 43.27 3.34
269 270 3.256136 GCTATTACGAGCTGGATGTACCT 59.744 47.826 1.44 0.00 39.50 3.08
270 271 4.616373 GCTATTACGAGCTGGATGTACCTC 60.616 50.000 1.44 0.00 39.50 3.85
271 272 1.688772 TACGAGCTGGATGTACCTCC 58.311 55.000 10.08 10.08 39.86 4.30
272 273 0.033011 ACGAGCTGGATGTACCTCCT 60.033 55.000 16.94 0.00 39.86 3.69
273 274 0.387202 CGAGCTGGATGTACCTCCTG 59.613 60.000 16.94 16.72 39.86 3.86
274 275 1.781786 GAGCTGGATGTACCTCCTGA 58.218 55.000 22.58 3.26 36.61 3.86
275 276 2.111384 GAGCTGGATGTACCTCCTGAA 58.889 52.381 22.58 2.63 36.61 3.02
276 277 1.834263 AGCTGGATGTACCTCCTGAAC 59.166 52.381 22.58 9.77 36.61 3.18
277 278 1.834263 GCTGGATGTACCTCCTGAACT 59.166 52.381 22.58 0.00 36.61 3.01
278 279 3.031736 GCTGGATGTACCTCCTGAACTA 58.968 50.000 22.58 1.36 36.61 2.24
279 280 3.451178 GCTGGATGTACCTCCTGAACTAA 59.549 47.826 22.58 0.74 36.61 2.24
280 281 4.442192 GCTGGATGTACCTCCTGAACTAAG 60.442 50.000 22.58 10.07 36.61 2.18
281 282 4.684724 TGGATGTACCTCCTGAACTAAGT 58.315 43.478 16.94 0.00 39.86 2.24
282 283 5.091552 TGGATGTACCTCCTGAACTAAGTT 58.908 41.667 16.94 0.00 39.86 2.66
283 284 6.258354 TGGATGTACCTCCTGAACTAAGTTA 58.742 40.000 16.94 0.00 39.86 2.24
284 285 6.380274 TGGATGTACCTCCTGAACTAAGTTAG 59.620 42.308 16.94 8.41 39.86 2.34
285 286 6.380560 GGATGTACCTCCTGAACTAAGTTAGT 59.619 42.308 9.85 9.85 36.74 2.24
286 287 7.093421 GGATGTACCTCCTGAACTAAGTTAGTT 60.093 40.741 24.91 24.91 42.55 2.24
314 315 8.554835 AGCTTTGTAGTAATCTTCTTTTCTCC 57.445 34.615 0.00 0.00 0.00 3.71
315 316 8.379331 AGCTTTGTAGTAATCTTCTTTTCTCCT 58.621 33.333 0.00 0.00 0.00 3.69
316 317 8.661257 GCTTTGTAGTAATCTTCTTTTCTCCTC 58.339 37.037 0.00 0.00 0.00 3.71
317 318 8.758633 TTTGTAGTAATCTTCTTTTCTCCTCG 57.241 34.615 0.00 0.00 0.00 4.63
318 319 7.463961 TGTAGTAATCTTCTTTTCTCCTCGT 57.536 36.000 0.00 0.00 0.00 4.18
319 320 7.893658 TGTAGTAATCTTCTTTTCTCCTCGTT 58.106 34.615 0.00 0.00 0.00 3.85
320 321 8.365647 TGTAGTAATCTTCTTTTCTCCTCGTTT 58.634 33.333 0.00 0.00 0.00 3.60
321 322 7.659652 AGTAATCTTCTTTTCTCCTCGTTTG 57.340 36.000 0.00 0.00 0.00 2.93
322 323 5.363979 AATCTTCTTTTCTCCTCGTTTGC 57.636 39.130 0.00 0.00 0.00 3.68
323 324 3.139077 TCTTCTTTTCTCCTCGTTTGCC 58.861 45.455 0.00 0.00 0.00 4.52
324 325 1.892209 TCTTTTCTCCTCGTTTGCCC 58.108 50.000 0.00 0.00 0.00 5.36
325 326 0.881796 CTTTTCTCCTCGTTTGCCCC 59.118 55.000 0.00 0.00 0.00 5.80
326 327 0.887387 TTTTCTCCTCGTTTGCCCCG 60.887 55.000 0.00 0.00 0.00 5.73
327 328 2.047213 TTTCTCCTCGTTTGCCCCGT 62.047 55.000 0.00 0.00 0.00 5.28
328 329 2.032071 CTCCTCGTTTGCCCCGTT 59.968 61.111 0.00 0.00 0.00 4.44
329 330 2.031465 TCCTCGTTTGCCCCGTTC 59.969 61.111 0.00 0.00 0.00 3.95
330 331 2.032071 CCTCGTTTGCCCCGTTCT 59.968 61.111 0.00 0.00 0.00 3.01
331 332 1.599797 CCTCGTTTGCCCCGTTCTT 60.600 57.895 0.00 0.00 0.00 2.52
332 333 1.574702 CCTCGTTTGCCCCGTTCTTC 61.575 60.000 0.00 0.00 0.00 2.87
333 334 1.897398 CTCGTTTGCCCCGTTCTTCG 61.897 60.000 0.00 0.00 39.52 3.79
334 335 2.254350 GTTTGCCCCGTTCTTCGC 59.746 61.111 0.00 0.00 38.35 4.70
335 336 2.112297 TTTGCCCCGTTCTTCGCT 59.888 55.556 0.00 0.00 38.35 4.93
336 337 1.527380 TTTGCCCCGTTCTTCGCTT 60.527 52.632 0.00 0.00 38.35 4.68
337 338 1.512156 TTTGCCCCGTTCTTCGCTTC 61.512 55.000 0.00 0.00 38.35 3.86
338 339 2.047179 GCCCCGTTCTTCGCTTCT 60.047 61.111 0.00 0.00 38.35 2.85
339 340 1.671379 GCCCCGTTCTTCGCTTCTT 60.671 57.895 0.00 0.00 38.35 2.52
340 341 1.636570 GCCCCGTTCTTCGCTTCTTC 61.637 60.000 0.00 0.00 38.35 2.87
341 342 0.320421 CCCCGTTCTTCGCTTCTTCA 60.320 55.000 0.00 0.00 38.35 3.02
342 343 1.508632 CCCGTTCTTCGCTTCTTCAA 58.491 50.000 0.00 0.00 38.35 2.69
343 344 1.871039 CCCGTTCTTCGCTTCTTCAAA 59.129 47.619 0.00 0.00 38.35 2.69
344 345 2.484264 CCCGTTCTTCGCTTCTTCAAAT 59.516 45.455 0.00 0.00 38.35 2.32
345 346 3.482786 CCGTTCTTCGCTTCTTCAAATG 58.517 45.455 0.00 0.00 38.35 2.32
346 347 3.482786 CGTTCTTCGCTTCTTCAAATGG 58.517 45.455 0.00 0.00 0.00 3.16
347 348 3.237628 GTTCTTCGCTTCTTCAAATGGC 58.762 45.455 0.00 0.00 0.00 4.40
348 349 2.783135 TCTTCGCTTCTTCAAATGGCT 58.217 42.857 0.00 0.00 0.00 4.75
349 350 2.485426 TCTTCGCTTCTTCAAATGGCTG 59.515 45.455 0.00 0.00 0.00 4.85
350 351 0.523072 TCGCTTCTTCAAATGGCTGC 59.477 50.000 0.00 0.00 0.00 5.25
351 352 0.524862 CGCTTCTTCAAATGGCTGCT 59.475 50.000 0.00 0.00 0.00 4.24
352 353 1.068055 CGCTTCTTCAAATGGCTGCTT 60.068 47.619 0.00 0.00 0.00 3.91
353 354 2.162208 CGCTTCTTCAAATGGCTGCTTA 59.838 45.455 0.00 0.00 0.00 3.09
354 355 3.505836 GCTTCTTCAAATGGCTGCTTAC 58.494 45.455 0.00 0.00 0.00 2.34
355 356 3.057315 GCTTCTTCAAATGGCTGCTTACA 60.057 43.478 0.00 0.00 0.00 2.41
364 365 4.324471 CTGCTTACAGCCATGGCA 57.676 55.556 37.18 15.78 41.51 4.92
365 366 1.805254 CTGCTTACAGCCATGGCAC 59.195 57.895 37.18 18.95 41.51 5.01
366 367 0.679002 CTGCTTACAGCCATGGCACT 60.679 55.000 37.18 23.46 41.51 4.40
367 368 0.617935 TGCTTACAGCCATGGCACTA 59.382 50.000 37.18 22.39 41.51 2.74
368 369 1.017387 GCTTACAGCCATGGCACTAC 58.983 55.000 37.18 17.81 44.88 2.73
369 370 1.290203 CTTACAGCCATGGCACTACG 58.710 55.000 37.18 21.31 44.88 3.51
370 371 0.107897 TTACAGCCATGGCACTACGG 60.108 55.000 37.18 20.38 44.88 4.02
371 372 1.261938 TACAGCCATGGCACTACGGT 61.262 55.000 37.18 24.33 44.88 4.83
372 373 2.108514 CAGCCATGGCACTACGGTG 61.109 63.158 37.18 21.23 44.88 4.94
384 385 2.348666 CACTACGGTGCTCAATGTAAGC 59.651 50.000 0.00 0.00 40.26 3.09
385 386 2.233922 ACTACGGTGCTCAATGTAAGCT 59.766 45.455 0.00 0.00 40.50 3.74
386 387 2.185004 ACGGTGCTCAATGTAAGCTT 57.815 45.000 3.48 3.48 40.50 3.74
387 388 2.076863 ACGGTGCTCAATGTAAGCTTC 58.923 47.619 0.00 0.00 40.50 3.86
388 389 2.076100 CGGTGCTCAATGTAAGCTTCA 58.924 47.619 0.00 1.13 40.50 3.02
389 390 2.679837 CGGTGCTCAATGTAAGCTTCAT 59.320 45.455 0.00 3.80 40.50 2.57
390 391 3.486375 CGGTGCTCAATGTAAGCTTCATG 60.486 47.826 0.00 0.00 40.50 3.07
391 392 3.441572 GGTGCTCAATGTAAGCTTCATGT 59.558 43.478 0.00 0.00 40.50 3.21
392 393 4.635765 GGTGCTCAATGTAAGCTTCATGTA 59.364 41.667 0.00 0.00 40.50 2.29
393 394 5.123820 GGTGCTCAATGTAAGCTTCATGTAA 59.876 40.000 0.00 0.00 40.50 2.41
394 395 6.183360 GGTGCTCAATGTAAGCTTCATGTAAT 60.183 38.462 0.00 0.00 40.50 1.89
395 396 7.253422 GTGCTCAATGTAAGCTTCATGTAATT 58.747 34.615 0.00 0.00 40.50 1.40
396 397 7.219535 GTGCTCAATGTAAGCTTCATGTAATTG 59.780 37.037 0.00 5.88 40.50 2.32
397 398 7.121020 TGCTCAATGTAAGCTTCATGTAATTGA 59.879 33.333 0.00 9.62 40.50 2.57
398 399 7.430502 GCTCAATGTAAGCTTCATGTAATTGAC 59.569 37.037 0.00 0.00 36.80 3.18
399 400 7.761409 TCAATGTAAGCTTCATGTAATTGACC 58.239 34.615 0.00 0.00 30.16 4.02
400 401 7.392953 TCAATGTAAGCTTCATGTAATTGACCA 59.607 33.333 0.00 0.00 30.16 4.02
401 402 7.886629 ATGTAAGCTTCATGTAATTGACCAT 57.113 32.000 0.00 0.00 0.00 3.55
402 403 7.701539 TGTAAGCTTCATGTAATTGACCATT 57.298 32.000 0.00 0.00 0.00 3.16
403 404 7.537715 TGTAAGCTTCATGTAATTGACCATTG 58.462 34.615 0.00 0.00 0.00 2.82
404 405 5.587388 AGCTTCATGTAATTGACCATTGG 57.413 39.130 0.00 0.00 0.00 3.16
405 406 5.018809 AGCTTCATGTAATTGACCATTGGT 58.981 37.500 8.42 8.42 39.44 3.67
414 415 2.621486 GACCATTGGTCCTAGGCCT 58.379 57.895 23.00 11.78 46.19 5.19
415 416 0.181350 GACCATTGGTCCTAGGCCTG 59.819 60.000 23.00 5.26 46.19 4.85
416 417 1.281925 ACCATTGGTCCTAGGCCTGG 61.282 60.000 17.99 13.68 0.00 4.45
417 418 1.152881 CATTGGTCCTAGGCCTGGC 60.153 63.158 17.99 11.05 0.00 4.85
427 428 3.869481 GGCCTGGCCTGTTTTGAA 58.131 55.556 30.42 0.00 46.69 2.69
428 429 2.132300 GGCCTGGCCTGTTTTGAAA 58.868 52.632 30.42 0.00 46.69 2.69
429 430 0.686789 GGCCTGGCCTGTTTTGAAAT 59.313 50.000 30.42 0.00 46.69 2.17
430 431 1.899142 GGCCTGGCCTGTTTTGAAATA 59.101 47.619 30.42 0.00 46.69 1.40
431 432 2.501316 GGCCTGGCCTGTTTTGAAATAT 59.499 45.455 30.42 0.00 46.69 1.28
432 433 3.704061 GGCCTGGCCTGTTTTGAAATATA 59.296 43.478 30.42 0.00 46.69 0.86
433 434 4.344968 GGCCTGGCCTGTTTTGAAATATAT 59.655 41.667 30.42 0.00 46.69 0.86
434 435 5.538433 GGCCTGGCCTGTTTTGAAATATATA 59.462 40.000 30.42 0.00 46.69 0.86
435 436 6.041523 GGCCTGGCCTGTTTTGAAATATATAA 59.958 38.462 30.42 0.00 46.69 0.98
436 437 7.147976 GCCTGGCCTGTTTTGAAATATATAAG 58.852 38.462 7.66 0.00 0.00 1.73
437 438 7.661040 CCTGGCCTGTTTTGAAATATATAAGG 58.339 38.462 3.32 0.00 0.00 2.69
438 439 7.287696 CCTGGCCTGTTTTGAAATATATAAGGT 59.712 37.037 3.32 0.00 0.00 3.50
439 440 9.349713 CTGGCCTGTTTTGAAATATATAAGGTA 57.650 33.333 3.32 0.00 0.00 3.08
440 441 9.349713 TGGCCTGTTTTGAAATATATAAGGTAG 57.650 33.333 3.32 0.00 0.00 3.18
441 442 9.569122 GGCCTGTTTTGAAATATATAAGGTAGA 57.431 33.333 0.00 0.00 0.00 2.59
465 466 9.745018 AGAATCTCATCTACCTTTTCATTTCAA 57.255 29.630 0.00 0.00 0.00 2.69
548 549 0.970640 TACACCGTCCTTGCAGCTAA 59.029 50.000 0.00 0.00 0.00 3.09
574 575 2.026729 TCCAGTTGTCCGGCATCAATTA 60.027 45.455 0.00 0.00 0.00 1.40
575 576 2.951642 CCAGTTGTCCGGCATCAATTAT 59.048 45.455 0.00 0.00 0.00 1.28
711 713 1.150081 CTTGCCCCAGCCATCCTAG 59.850 63.158 0.00 0.00 38.69 3.02
727 729 6.315714 CCATCCTAGTTATGACCCTCTCTTA 58.684 44.000 4.32 0.00 0.00 2.10
735 737 6.104094 AGTTATGACCCTCTCTTATCCTCTCT 59.896 42.308 0.00 0.00 0.00 3.10
964 978 6.367422 GCAATAGTTCAGTGATAGCCTGATAC 59.633 42.308 0.00 3.33 38.66 2.24
1092 1106 2.530700 GTCGCTACGCTTCTACATGAAC 59.469 50.000 0.00 0.00 0.00 3.18
1095 1109 2.921754 GCTACGCTTCTACATGAACGTT 59.078 45.455 0.00 0.00 40.25 3.99
1188 1202 7.828508 TGAATCATCATCTTTGGGATTAAGG 57.171 36.000 0.00 0.00 31.66 2.69
1198 1212 9.807649 CATCTTTGGGATTAAGGAATTTACAAG 57.192 33.333 0.00 0.00 31.27 3.16
1222 1236 8.931385 AGTGGTTGATGCATGAAATTTAATAC 57.069 30.769 2.46 0.00 0.00 1.89
1223 1237 8.752187 AGTGGTTGATGCATGAAATTTAATACT 58.248 29.630 2.46 0.00 0.00 2.12
1331 1354 1.818060 GCATCCACCTGTTGCAATGTA 59.182 47.619 0.59 0.00 36.40 2.29
1405 1428 1.078709 TCTCGTTCCAGGTACGTACG 58.921 55.000 18.98 15.01 39.84 3.67
1406 1429 1.078709 CTCGTTCCAGGTACGTACGA 58.921 55.000 24.41 12.81 39.84 3.43
1407 1430 1.464608 CTCGTTCCAGGTACGTACGAA 59.535 52.381 24.41 13.79 40.25 3.85
1446 1475 1.067565 ACACTGATTGCTCGATGACGT 60.068 47.619 0.00 0.00 40.69 4.34
1456 1485 2.881074 CTCGATGACGTGACAGGAATT 58.119 47.619 0.00 0.00 40.69 2.17
1524 1553 3.096852 AGGTGTATGGAGAATCACGTCA 58.903 45.455 0.00 0.00 36.25 4.35
1525 1554 3.119101 AGGTGTATGGAGAATCACGTCAC 60.119 47.826 0.00 0.00 36.25 3.67
1526 1555 3.368013 GGTGTATGGAGAATCACGTCACA 60.368 47.826 0.00 0.00 36.25 3.58
1527 1556 4.242475 GTGTATGGAGAATCACGTCACAA 58.758 43.478 0.00 0.00 36.25 3.33
1528 1557 4.091509 GTGTATGGAGAATCACGTCACAAC 59.908 45.833 0.00 0.00 36.25 3.32
1529 1558 3.685139 ATGGAGAATCACGTCACAACT 57.315 42.857 0.00 0.00 36.25 3.16
1530 1559 3.469008 TGGAGAATCACGTCACAACTT 57.531 42.857 0.00 0.00 36.25 2.66
1535 1564 4.188462 AGAATCACGTCACAACTTCACAA 58.812 39.130 0.00 0.00 0.00 3.33
1553 1582 0.452987 AATGTCACGCATGCATGGAC 59.547 50.000 27.34 23.72 37.96 4.02
1573 1602 1.982073 GCCGCGCTATTTGCTCTGTT 61.982 55.000 5.56 0.00 40.11 3.16
1587 1616 2.863137 GCTCTGTTCCGAGATGAATGAC 59.137 50.000 0.00 0.00 32.74 3.06
1588 1617 3.111838 CTCTGTTCCGAGATGAATGACG 58.888 50.000 0.00 0.00 32.74 4.35
1589 1618 2.159240 TCTGTTCCGAGATGAATGACGG 60.159 50.000 0.00 0.00 45.61 4.79
1764 1793 3.131755 TCATGATCGAGATCTGCAACTGT 59.868 43.478 0.00 0.00 38.60 3.55
1782 1811 1.700739 TGTGACAACCTCCCCGTTATT 59.299 47.619 0.00 0.00 0.00 1.40
1794 1823 1.157870 CCGTTATTCCGCTTGCCGAT 61.158 55.000 0.00 0.00 40.02 4.18
2063 2092 0.255890 CGGATGGGGTGGTTCATTCT 59.744 55.000 0.00 0.00 0.00 2.40
2178 2207 2.831685 TGTATCACGCTGTTGTCCTT 57.168 45.000 0.00 0.00 0.00 3.36
2199 2228 2.875933 TGTTTGTCCAAATCTCGTCACC 59.124 45.455 0.00 0.00 32.36 4.02
2235 2264 0.447801 CGCCATACACTTGTTGCTCC 59.552 55.000 0.00 0.00 0.00 4.70
2237 2266 1.886222 GCCATACACTTGTTGCTCCCA 60.886 52.381 0.00 0.00 0.00 4.37
2245 2274 2.489329 ACTTGTTGCTCCCATCAATTCG 59.511 45.455 0.00 0.00 32.06 3.34
2263 2294 2.818132 CCGACTCCAGCCATCTCC 59.182 66.667 0.00 0.00 0.00 3.71
2293 2324 5.291293 CGAAAATATCGTGGGTTCAAGTT 57.709 39.130 0.00 0.00 46.52 2.66
2298 2329 5.670792 ATATCGTGGGTTCAAGTTCACTA 57.329 39.130 0.00 0.00 0.00 2.74
2303 2334 4.152402 CGTGGGTTCAAGTTCACTAGATTG 59.848 45.833 0.00 0.00 0.00 2.67
2308 2339 7.038302 TGGGTTCAAGTTCACTAGATTGTCTAT 60.038 37.037 0.00 0.00 0.00 1.98
2341 2372 4.895668 TTTTAACACATACTCCCTCCGT 57.104 40.909 0.00 0.00 0.00 4.69
2342 2373 4.895668 TTTAACACATACTCCCTCCGTT 57.104 40.909 0.00 0.00 0.00 4.44
2343 2374 4.460948 TTAACACATACTCCCTCCGTTC 57.539 45.455 0.00 0.00 0.00 3.95
2344 2375 1.192428 ACACATACTCCCTCCGTTCC 58.808 55.000 0.00 0.00 0.00 3.62
2345 2376 1.273098 ACACATACTCCCTCCGTTCCT 60.273 52.381 0.00 0.00 0.00 3.36
2346 2377 2.024655 ACACATACTCCCTCCGTTCCTA 60.025 50.000 0.00 0.00 0.00 2.94
2347 2378 3.028850 CACATACTCCCTCCGTTCCTAA 58.971 50.000 0.00 0.00 0.00 2.69
2348 2379 3.449737 CACATACTCCCTCCGTTCCTAAA 59.550 47.826 0.00 0.00 0.00 1.85
2349 2380 4.101119 CACATACTCCCTCCGTTCCTAAAT 59.899 45.833 0.00 0.00 0.00 1.40
2350 2381 5.303589 CACATACTCCCTCCGTTCCTAAATA 59.696 44.000 0.00 0.00 0.00 1.40
2351 2382 6.014499 CACATACTCCCTCCGTTCCTAAATAT 60.014 42.308 0.00 0.00 0.00 1.28
2352 2383 7.177921 CACATACTCCCTCCGTTCCTAAATATA 59.822 40.741 0.00 0.00 0.00 0.86
2353 2384 7.731688 ACATACTCCCTCCGTTCCTAAATATAA 59.268 37.037 0.00 0.00 0.00 0.98
2354 2385 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2355 2386 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2356 2387 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2357 2388 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
2358 2389 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
2359 2390 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
2360 2391 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
2361 2392 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
2377 2408 7.659652 AGTCTTTTTAGAGATTTCGACAAGG 57.340 36.000 0.00 0.00 0.00 3.61
2378 2409 6.651225 AGTCTTTTTAGAGATTTCGACAAGGG 59.349 38.462 0.00 0.00 0.00 3.95
2379 2410 6.649557 GTCTTTTTAGAGATTTCGACAAGGGA 59.350 38.462 0.00 0.00 0.00 4.20
2380 2411 6.649557 TCTTTTTAGAGATTTCGACAAGGGAC 59.350 38.462 0.00 0.00 0.00 4.46
2382 2413 6.845758 TTTAGAGATTTCGACAAGGGACTA 57.154 37.500 0.00 0.00 38.49 2.59
2383 2414 4.722361 AGAGATTTCGACAAGGGACTAC 57.278 45.455 0.00 0.00 38.49 2.73
2384 2415 4.087182 AGAGATTTCGACAAGGGACTACA 58.913 43.478 0.00 0.00 38.49 2.74
2385 2416 4.712337 AGAGATTTCGACAAGGGACTACAT 59.288 41.667 0.00 0.00 38.49 2.29
2386 2417 5.892119 AGAGATTTCGACAAGGGACTACATA 59.108 40.000 0.00 0.00 38.49 2.29
2387 2418 5.903810 AGATTTCGACAAGGGACTACATAC 58.096 41.667 0.00 0.00 38.49 2.39
2388 2419 3.770263 TTCGACAAGGGACTACATACG 57.230 47.619 0.00 0.00 38.49 3.06
2389 2420 2.019249 TCGACAAGGGACTACATACGG 58.981 52.381 0.00 0.00 38.49 4.02
2390 2421 2.019249 CGACAAGGGACTACATACGGA 58.981 52.381 0.00 0.00 38.49 4.69
2391 2422 2.033049 CGACAAGGGACTACATACGGAG 59.967 54.545 0.00 0.00 38.49 4.63
2392 2423 1.755380 ACAAGGGACTACATACGGAGC 59.245 52.381 0.00 0.00 38.49 4.70
2393 2424 1.754803 CAAGGGACTACATACGGAGCA 59.245 52.381 0.00 0.00 38.49 4.26
2394 2425 2.154567 AGGGACTACATACGGAGCAA 57.845 50.000 0.00 0.00 36.02 3.91
2395 2426 2.463752 AGGGACTACATACGGAGCAAA 58.536 47.619 0.00 0.00 36.02 3.68
2396 2427 2.835764 AGGGACTACATACGGAGCAAAA 59.164 45.455 0.00 0.00 36.02 2.44
2397 2428 3.454812 AGGGACTACATACGGAGCAAAAT 59.545 43.478 0.00 0.00 36.02 1.82
2398 2429 3.560068 GGGACTACATACGGAGCAAAATG 59.440 47.826 0.00 0.00 0.00 2.32
2399 2430 4.439057 GGACTACATACGGAGCAAAATGA 58.561 43.478 0.00 0.00 0.00 2.57
2400 2431 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
2401 2432 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2402 2433 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2403 2434 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2404 2435 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2405 2436 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2406 2437 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2407 2438 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2408 2439 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2409 2440 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2410 2441 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2411 2442 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2496 2527 1.755179 TTAGGAACGGAGGGAGTACG 58.245 55.000 0.00 0.00 0.00 3.67
2516 2547 6.991531 AGTACGTTAACAAATTTCAGGGTGTA 59.008 34.615 6.39 0.00 0.00 2.90
2517 2548 6.063640 ACGTTAACAAATTTCAGGGTGTAC 57.936 37.500 6.39 0.00 0.00 2.90
2518 2549 5.008911 ACGTTAACAAATTTCAGGGTGTACC 59.991 40.000 6.39 0.00 40.67 3.34
2537 3287 6.317893 GTGTACCCCATAACTTAAACATGGAG 59.682 42.308 9.99 1.87 41.53 3.86
2550 3300 0.798776 CATGGAGTTTCACTGCGTCC 59.201 55.000 0.00 0.00 39.63 4.79
2556 3311 1.891919 TTTCACTGCGTCCCTGCAC 60.892 57.895 0.00 0.00 40.62 4.57
2584 3339 2.024941 CCATTTGGAGAAAGCTAGGGGT 60.025 50.000 0.00 0.00 37.39 4.95
2613 3368 1.118838 CAAGGCAAACCCAAACAGGA 58.881 50.000 0.00 0.00 41.22 3.86
2625 3380 3.367703 CCCAAACAGGAGATGCATCAAAC 60.368 47.826 27.81 16.68 41.22 2.93
2627 3382 1.742761 ACAGGAGATGCATCAAACCG 58.257 50.000 27.81 21.33 0.00 4.44
2639 3394 2.433664 AAACCGCGCGAGTAAGGG 60.434 61.111 34.63 15.43 0.00 3.95
2677 3434 9.123902 TGTCCTTTTTCATGTGATCCTAATATG 57.876 33.333 0.00 0.00 0.00 1.78
2678 3435 9.342308 GTCCTTTTTCATGTGATCCTAATATGA 57.658 33.333 0.00 0.00 0.00 2.15
2684 3441 9.764363 TTTCATGTGATCCTAATATGAGTACAC 57.236 33.333 0.00 0.00 0.00 2.90
2685 3442 8.712228 TCATGTGATCCTAATATGAGTACACT 57.288 34.615 0.00 0.00 0.00 3.55
2721 3478 6.012858 TGAAGAGTACAAGGGAATACCACAAT 60.013 38.462 0.00 0.00 43.89 2.71
2722 3479 7.181305 TGAAGAGTACAAGGGAATACCACAATA 59.819 37.037 0.00 0.00 43.89 1.90
2723 3480 7.691993 AGAGTACAAGGGAATACCACAATAT 57.308 36.000 0.00 0.00 43.89 1.28
2724 3481 8.102484 AGAGTACAAGGGAATACCACAATATT 57.898 34.615 0.00 0.00 43.89 1.28
2725 3482 8.557450 AGAGTACAAGGGAATACCACAATATTT 58.443 33.333 0.00 0.00 43.89 1.40
2726 3483 8.519799 AGTACAAGGGAATACCACAATATTTG 57.480 34.615 0.00 0.00 43.89 2.32
2727 3484 6.220726 ACAAGGGAATACCACAATATTTGC 57.779 37.500 0.00 0.00 43.89 3.68
2728 3485 5.163561 ACAAGGGAATACCACAATATTTGCG 60.164 40.000 0.00 0.00 43.89 4.85
2729 3486 4.787551 AGGGAATACCACAATATTTGCGA 58.212 39.130 0.00 0.00 43.89 5.10
2730 3487 4.821805 AGGGAATACCACAATATTTGCGAG 59.178 41.667 0.00 0.00 43.89 5.03
2731 3488 4.578928 GGGAATACCACAATATTTGCGAGT 59.421 41.667 0.00 0.00 39.85 4.18
2732 3489 5.277828 GGGAATACCACAATATTTGCGAGTC 60.278 44.000 0.00 0.00 39.85 3.36
2733 3490 5.403897 AATACCACAATATTTGCGAGTCG 57.596 39.130 8.54 8.54 0.00 4.18
2734 3491 8.885040 GGAATACCACAATATTTGCGAGTCGC 62.885 46.154 30.10 30.10 43.93 5.19
2765 3522 4.796231 CCGTCTCGGGCGACTTGG 62.796 72.222 0.56 0.00 44.15 3.61
2766 3523 4.796231 CGTCTCGGGCGACTTGGG 62.796 72.222 0.00 0.00 0.00 4.12
2775 3532 2.815647 CGACTTGGGCGGCTCTTC 60.816 66.667 9.56 0.00 0.00 2.87
2776 3533 2.347490 GACTTGGGCGGCTCTTCA 59.653 61.111 9.56 0.00 0.00 3.02
2777 3534 1.302511 GACTTGGGCGGCTCTTCAA 60.303 57.895 9.56 3.40 0.00 2.69
2778 3535 0.889186 GACTTGGGCGGCTCTTCAAA 60.889 55.000 9.56 0.00 0.00 2.69
2779 3536 1.172812 ACTTGGGCGGCTCTTCAAAC 61.173 55.000 9.56 0.00 0.00 2.93
2780 3537 1.866853 CTTGGGCGGCTCTTCAAACC 61.867 60.000 9.56 0.00 0.00 3.27
2781 3538 3.062466 GGGCGGCTCTTCAAACCC 61.062 66.667 9.56 0.00 0.00 4.11
2782 3539 2.034221 GGCGGCTCTTCAAACCCT 59.966 61.111 0.00 0.00 0.00 4.34
2783 3540 1.298667 GGCGGCTCTTCAAACCCTA 59.701 57.895 0.00 0.00 0.00 3.53
2784 3541 0.744771 GGCGGCTCTTCAAACCCTAG 60.745 60.000 0.00 0.00 0.00 3.02
2785 3542 1.369839 GCGGCTCTTCAAACCCTAGC 61.370 60.000 0.00 0.00 0.00 3.42
2786 3543 3.176728 GGCTCTTCAAACCCTAGCC 57.823 57.895 0.00 0.00 45.37 3.93
2787 3544 0.744771 GGCTCTTCAAACCCTAGCCG 60.745 60.000 0.00 0.00 42.98 5.52
2788 3545 1.369839 GCTCTTCAAACCCTAGCCGC 61.370 60.000 0.00 0.00 0.00 6.53
2789 3546 0.250513 CTCTTCAAACCCTAGCCGCT 59.749 55.000 0.00 0.00 0.00 5.52
2790 3547 1.480954 CTCTTCAAACCCTAGCCGCTA 59.519 52.381 0.00 0.00 0.00 4.26
2791 3548 1.480954 TCTTCAAACCCTAGCCGCTAG 59.519 52.381 19.03 19.03 34.16 3.42
2801 3558 4.468689 GCCGCTAGGGTCACCACC 62.469 72.222 6.02 0.00 42.90 4.61
2802 3559 3.000819 CCGCTAGGGTCACCACCA 61.001 66.667 6.02 0.00 45.94 4.17
2803 3560 2.264794 CGCTAGGGTCACCACCAC 59.735 66.667 0.00 0.00 45.94 4.16
2804 3561 2.669240 GCTAGGGTCACCACCACC 59.331 66.667 0.00 0.00 45.94 4.61
2805 3562 1.918800 GCTAGGGTCACCACCACCT 60.919 63.158 0.00 0.00 45.94 4.00
2806 3563 1.900545 GCTAGGGTCACCACCACCTC 61.901 65.000 0.00 0.00 45.94 3.85
2807 3564 1.229400 TAGGGTCACCACCACCTCC 60.229 63.158 0.00 0.00 45.94 4.30
2808 3565 2.038545 TAGGGTCACCACCACCTCCA 62.039 60.000 0.00 0.00 45.94 3.86
2809 3566 2.231380 GGGTCACCACCACCTCCAT 61.231 63.158 0.00 0.00 45.94 3.41
2810 3567 1.299976 GGTCACCACCACCTCCATC 59.700 63.158 0.00 0.00 43.17 3.51
2811 3568 1.299976 GTCACCACCACCTCCATCC 59.700 63.158 0.00 0.00 0.00 3.51
2812 3569 1.923395 TCACCACCACCTCCATCCC 60.923 63.158 0.00 0.00 0.00 3.85
2813 3570 1.925455 CACCACCACCTCCATCCCT 60.925 63.158 0.00 0.00 0.00 4.20
2814 3571 1.151587 ACCACCACCTCCATCCCTT 60.152 57.895 0.00 0.00 0.00 3.95
2815 3572 1.208165 ACCACCACCTCCATCCCTTC 61.208 60.000 0.00 0.00 0.00 3.46
2816 3573 1.609783 CACCACCTCCATCCCTTCC 59.390 63.158 0.00 0.00 0.00 3.46
2817 3574 1.619669 ACCACCTCCATCCCTTCCC 60.620 63.158 0.00 0.00 0.00 3.97
2818 3575 1.308216 CCACCTCCATCCCTTCCCT 60.308 63.158 0.00 0.00 0.00 4.20
2819 3576 1.348775 CCACCTCCATCCCTTCCCTC 61.349 65.000 0.00 0.00 0.00 4.30
2820 3577 1.004891 ACCTCCATCCCTTCCCTCC 59.995 63.158 0.00 0.00 0.00 4.30
2821 3578 2.143419 CCTCCATCCCTTCCCTCCG 61.143 68.421 0.00 0.00 0.00 4.63
2822 3579 2.768344 TCCATCCCTTCCCTCCGC 60.768 66.667 0.00 0.00 0.00 5.54
2823 3580 3.878667 CCATCCCTTCCCTCCGCC 61.879 72.222 0.00 0.00 0.00 6.13
2824 3581 4.241555 CATCCCTTCCCTCCGCCG 62.242 72.222 0.00 0.00 0.00 6.46
2884 3641 2.579738 GTGGCGGAGACTCCTTCC 59.420 66.667 19.39 18.60 34.59 3.46
2885 3642 1.985116 GTGGCGGAGACTCCTTCCT 60.985 63.158 19.39 0.00 34.59 3.36
2886 3643 1.984570 TGGCGGAGACTCCTTCCTG 60.985 63.158 19.39 4.53 34.59 3.86
2887 3644 2.726351 GGCGGAGACTCCTTCCTGG 61.726 68.421 19.39 3.80 33.30 4.45
2888 3645 1.682684 GCGGAGACTCCTTCCTGGA 60.683 63.158 19.39 0.00 43.86 3.86
2889 3646 1.045911 GCGGAGACTCCTTCCTGGAT 61.046 60.000 19.39 0.00 45.16 3.41
2890 3647 1.036707 CGGAGACTCCTTCCTGGATC 58.963 60.000 19.39 0.00 45.16 3.36
2891 3648 1.686428 CGGAGACTCCTTCCTGGATCA 60.686 57.143 19.39 0.00 45.16 2.92
2892 3649 1.760029 GGAGACTCCTTCCTGGATCAC 59.240 57.143 14.72 0.00 45.16 3.06
2893 3650 1.407258 GAGACTCCTTCCTGGATCACG 59.593 57.143 0.00 0.00 45.16 4.35
2894 3651 1.187087 GACTCCTTCCTGGATCACGT 58.813 55.000 0.00 0.00 45.16 4.49
2895 3652 1.135333 GACTCCTTCCTGGATCACGTC 59.865 57.143 0.00 0.00 45.16 4.34
2896 3653 0.101399 CTCCTTCCTGGATCACGTCG 59.899 60.000 0.00 0.00 45.16 5.12
2897 3654 1.141881 CCTTCCTGGATCACGTCGG 59.858 63.158 0.00 0.00 38.35 4.79
2898 3655 1.320344 CCTTCCTGGATCACGTCGGA 61.320 60.000 0.00 0.00 38.35 4.55
2899 3656 0.101399 CTTCCTGGATCACGTCGGAG 59.899 60.000 0.00 0.00 0.00 4.63
2900 3657 1.320344 TTCCTGGATCACGTCGGAGG 61.320 60.000 0.00 0.00 0.00 4.30
2901 3658 2.786495 CCTGGATCACGTCGGAGGG 61.786 68.421 2.48 0.00 0.00 4.30
2902 3659 2.758327 TGGATCACGTCGGAGGGG 60.758 66.667 2.48 0.00 0.00 4.79
2903 3660 3.537874 GGATCACGTCGGAGGGGG 61.538 72.222 0.00 0.00 0.00 5.40
2904 3661 2.758737 GATCACGTCGGAGGGGGT 60.759 66.667 0.00 0.00 0.00 4.95
2905 3662 3.075005 ATCACGTCGGAGGGGGTG 61.075 66.667 0.00 0.00 0.00 4.61
2923 3680 4.489771 GGGCGGGACCTCCACATG 62.490 72.222 0.00 0.00 39.10 3.21
2926 3683 4.082523 CGGGACCTCCACATGCGT 62.083 66.667 0.00 0.00 37.91 5.24
2927 3684 2.436646 GGGACCTCCACATGCGTG 60.437 66.667 3.82 3.82 43.21 5.34
2928 3685 2.662596 GGACCTCCACATGCGTGA 59.337 61.111 14.17 0.00 46.80 4.35
2929 3686 1.741770 GGACCTCCACATGCGTGAC 60.742 63.158 14.17 0.00 46.80 3.67
2930 3687 2.048222 ACCTCCACATGCGTGACG 60.048 61.111 14.17 0.00 46.80 4.35
2931 3688 2.815211 CCTCCACATGCGTGACGG 60.815 66.667 14.17 12.57 46.80 4.79
2932 3689 3.490759 CTCCACATGCGTGACGGC 61.491 66.667 14.17 0.00 46.80 5.68
2950 3707 3.324035 GCAACGGCGATCTGATCC 58.676 61.111 16.62 5.06 0.00 3.36
2951 3708 1.521457 GCAACGGCGATCTGATCCA 60.521 57.895 16.62 0.00 0.00 3.41
2952 3709 0.882042 GCAACGGCGATCTGATCCAT 60.882 55.000 16.62 0.00 0.00 3.41
2953 3710 0.863799 CAACGGCGATCTGATCCATG 59.136 55.000 16.62 4.44 0.00 3.66
2954 3711 0.250038 AACGGCGATCTGATCCATGG 60.250 55.000 16.62 4.97 0.00 3.66
2955 3712 1.368950 CGGCGATCTGATCCATGGT 59.631 57.895 12.58 0.00 0.00 3.55
2956 3713 0.947660 CGGCGATCTGATCCATGGTG 60.948 60.000 12.58 1.15 0.00 4.17
2957 3714 0.604780 GGCGATCTGATCCATGGTGG 60.605 60.000 12.58 0.81 39.43 4.61
2958 3715 1.233285 GCGATCTGATCCATGGTGGC 61.233 60.000 12.58 0.00 37.47 5.01
2959 3716 0.947660 CGATCTGATCCATGGTGGCG 60.948 60.000 12.58 3.80 37.47 5.69
2960 3717 1.228063 ATCTGATCCATGGTGGCGC 60.228 57.895 12.58 0.00 37.47 6.53
2961 3718 3.274586 CTGATCCATGGTGGCGCG 61.275 66.667 12.58 0.00 37.47 6.86
2962 3719 4.854924 TGATCCATGGTGGCGCGG 62.855 66.667 12.58 0.00 37.47 6.46
2963 3720 4.856801 GATCCATGGTGGCGCGGT 62.857 66.667 12.58 0.00 37.47 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.189342 GGCGACTGAAAGATCGAGAAG 58.811 52.381 0.00 0.00 38.94 2.85
1 2 1.467543 CGGCGACTGAAAGATCGAGAA 60.468 52.381 0.00 0.00 38.94 2.87
2 3 0.098905 CGGCGACTGAAAGATCGAGA 59.901 55.000 0.00 0.00 38.94 4.04
3 4 0.179161 ACGGCGACTGAAAGATCGAG 60.179 55.000 16.62 0.00 38.94 4.04
4 5 0.179171 GACGGCGACTGAAAGATCGA 60.179 55.000 16.62 0.00 38.94 3.59
5 6 1.140407 GGACGGCGACTGAAAGATCG 61.140 60.000 16.62 0.00 39.38 3.69
6 7 0.806492 GGGACGGCGACTGAAAGATC 60.806 60.000 16.62 0.00 37.43 2.75
7 8 1.218316 GGGACGGCGACTGAAAGAT 59.782 57.895 16.62 0.00 37.43 2.40
8 9 2.654877 GGGACGGCGACTGAAAGA 59.345 61.111 16.62 0.00 37.43 2.52
21 22 0.532196 CCTTCTTATTCCCGCGGGAC 60.532 60.000 45.68 0.00 45.11 4.46
22 23 0.979187 ACCTTCTTATTCCCGCGGGA 60.979 55.000 42.66 42.66 43.52 5.14
23 24 0.814010 CACCTTCTTATTCCCGCGGG 60.814 60.000 39.13 39.13 0.00 6.13
24 25 0.814010 CCACCTTCTTATTCCCGCGG 60.814 60.000 21.04 21.04 0.00 6.46
25 26 0.177141 TCCACCTTCTTATTCCCGCG 59.823 55.000 0.00 0.00 0.00 6.46
26 27 2.222027 CATCCACCTTCTTATTCCCGC 58.778 52.381 0.00 0.00 0.00 6.13
27 28 2.438021 TCCATCCACCTTCTTATTCCCG 59.562 50.000 0.00 0.00 0.00 5.14
28 29 4.401925 CATCCATCCACCTTCTTATTCCC 58.598 47.826 0.00 0.00 0.00 3.97
29 30 4.401925 CCATCCATCCACCTTCTTATTCC 58.598 47.826 0.00 0.00 0.00 3.01
30 31 3.823304 GCCATCCATCCACCTTCTTATTC 59.177 47.826 0.00 0.00 0.00 1.75
31 32 3.464833 AGCCATCCATCCACCTTCTTATT 59.535 43.478 0.00 0.00 0.00 1.40
32 33 3.059097 AGCCATCCATCCACCTTCTTAT 58.941 45.455 0.00 0.00 0.00 1.73
33 34 2.492025 AGCCATCCATCCACCTTCTTA 58.508 47.619 0.00 0.00 0.00 2.10
34 35 1.302907 AGCCATCCATCCACCTTCTT 58.697 50.000 0.00 0.00 0.00 2.52
35 36 2.196742 TAGCCATCCATCCACCTTCT 57.803 50.000 0.00 0.00 0.00 2.85
36 37 2.487986 CCTTAGCCATCCATCCACCTTC 60.488 54.545 0.00 0.00 0.00 3.46
37 38 1.496429 CCTTAGCCATCCATCCACCTT 59.504 52.381 0.00 0.00 0.00 3.50
38 39 1.143813 CCTTAGCCATCCATCCACCT 58.856 55.000 0.00 0.00 0.00 4.00
39 40 1.140312 TCCTTAGCCATCCATCCACC 58.860 55.000 0.00 0.00 0.00 4.61
40 41 2.092429 TGTTCCTTAGCCATCCATCCAC 60.092 50.000 0.00 0.00 0.00 4.02
41 42 2.173356 CTGTTCCTTAGCCATCCATCCA 59.827 50.000 0.00 0.00 0.00 3.41
42 43 2.487986 CCTGTTCCTTAGCCATCCATCC 60.488 54.545 0.00 0.00 0.00 3.51
43 44 2.487986 CCCTGTTCCTTAGCCATCCATC 60.488 54.545 0.00 0.00 0.00 3.51
49 50 0.840288 TGCTCCCTGTTCCTTAGCCA 60.840 55.000 0.00 0.00 32.14 4.75
53 54 1.965414 TCCATGCTCCCTGTTCCTTA 58.035 50.000 0.00 0.00 0.00 2.69
73 74 3.159615 TGGCACATCAGACTGGCA 58.840 55.556 1.81 2.70 40.40 4.92
104 105 2.506438 GGTCCGCGACTTTCTCCG 60.506 66.667 8.23 0.00 32.47 4.63
107 108 2.342648 GGTGGTCCGCGACTTTCT 59.657 61.111 8.23 0.00 32.47 2.52
138 139 0.037697 TGGTGAGGTTGACGAATCCG 60.038 55.000 0.00 0.00 42.50 4.18
161 162 2.464865 CTAGTGCTCATGTTAGTCGCC 58.535 52.381 0.00 0.00 0.00 5.54
162 163 1.855360 GCTAGTGCTCATGTTAGTCGC 59.145 52.381 0.00 0.00 36.03 5.19
223 224 6.183360 GCATCCTTGTCATCCTGCATAATATC 60.183 42.308 0.00 0.00 0.00 1.63
234 235 4.883083 TCGTAATAGCATCCTTGTCATCC 58.117 43.478 0.00 0.00 0.00 3.51
235 236 4.387256 GCTCGTAATAGCATCCTTGTCATC 59.613 45.833 0.00 0.00 42.30 2.92
237 238 3.384789 AGCTCGTAATAGCATCCTTGTCA 59.615 43.478 0.00 0.00 45.30 3.58
238 239 3.738282 CAGCTCGTAATAGCATCCTTGTC 59.262 47.826 0.00 0.00 45.30 3.18
239 240 3.493350 CCAGCTCGTAATAGCATCCTTGT 60.493 47.826 0.00 0.00 45.30 3.16
240 241 3.062763 CCAGCTCGTAATAGCATCCTTG 58.937 50.000 0.00 0.00 45.30 3.61
241 242 2.965831 TCCAGCTCGTAATAGCATCCTT 59.034 45.455 0.00 0.00 45.30 3.36
243 244 3.257393 CATCCAGCTCGTAATAGCATCC 58.743 50.000 0.00 0.00 45.30 3.51
245 246 4.322049 GGTACATCCAGCTCGTAATAGCAT 60.322 45.833 0.00 0.00 45.30 3.79
246 247 3.005472 GGTACATCCAGCTCGTAATAGCA 59.995 47.826 0.00 0.00 45.30 3.49
247 248 3.256136 AGGTACATCCAGCTCGTAATAGC 59.744 47.826 0.00 0.00 43.11 2.97
248 249 4.082679 GGAGGTACATCCAGCTCGTAATAG 60.083 50.000 21.42 0.00 42.68 1.73
249 250 3.825014 GGAGGTACATCCAGCTCGTAATA 59.175 47.826 21.42 0.00 42.68 0.98
250 251 2.628657 GGAGGTACATCCAGCTCGTAAT 59.371 50.000 21.42 0.00 42.68 1.89
251 252 2.029623 GGAGGTACATCCAGCTCGTAA 58.970 52.381 21.42 0.00 42.68 3.18
252 253 1.214673 AGGAGGTACATCCAGCTCGTA 59.785 52.381 27.21 0.00 42.68 3.43
253 254 0.033011 AGGAGGTACATCCAGCTCGT 60.033 55.000 27.21 3.58 42.68 4.18
254 255 0.387202 CAGGAGGTACATCCAGCTCG 59.613 60.000 27.21 7.34 42.68 5.03
255 256 1.781786 TCAGGAGGTACATCCAGCTC 58.218 55.000 27.21 7.61 42.26 4.09
256 257 1.834263 GTTCAGGAGGTACATCCAGCT 59.166 52.381 27.21 5.12 42.26 4.24
257 258 1.834263 AGTTCAGGAGGTACATCCAGC 59.166 52.381 27.21 10.60 42.26 4.85
258 259 4.712337 ACTTAGTTCAGGAGGTACATCCAG 59.288 45.833 27.21 19.97 42.26 3.86
259 260 4.684724 ACTTAGTTCAGGAGGTACATCCA 58.315 43.478 27.21 5.90 42.26 3.41
260 261 5.678955 AACTTAGTTCAGGAGGTACATCC 57.321 43.478 18.91 18.91 39.89 3.51
261 262 7.407393 ACTAACTTAGTTCAGGAGGTACATC 57.593 40.000 0.00 0.00 34.86 3.06
262 263 7.793948 AACTAACTTAGTTCAGGAGGTACAT 57.206 36.000 8.19 0.00 45.38 2.29
288 289 9.654663 GGAGAAAAGAAGATTACTACAAAGCTA 57.345 33.333 0.00 0.00 0.00 3.32
289 290 8.379331 AGGAGAAAAGAAGATTACTACAAAGCT 58.621 33.333 0.00 0.00 0.00 3.74
290 291 8.554835 AGGAGAAAAGAAGATTACTACAAAGC 57.445 34.615 0.00 0.00 0.00 3.51
291 292 8.865001 CGAGGAGAAAAGAAGATTACTACAAAG 58.135 37.037 0.00 0.00 0.00 2.77
292 293 8.365647 ACGAGGAGAAAAGAAGATTACTACAAA 58.634 33.333 0.00 0.00 0.00 2.83
293 294 7.893658 ACGAGGAGAAAAGAAGATTACTACAA 58.106 34.615 0.00 0.00 0.00 2.41
294 295 7.463961 ACGAGGAGAAAAGAAGATTACTACA 57.536 36.000 0.00 0.00 0.00 2.74
295 296 8.648968 CAAACGAGGAGAAAAGAAGATTACTAC 58.351 37.037 0.00 0.00 0.00 2.73
296 297 7.331193 GCAAACGAGGAGAAAAGAAGATTACTA 59.669 37.037 0.00 0.00 0.00 1.82
297 298 6.147985 GCAAACGAGGAGAAAAGAAGATTACT 59.852 38.462 0.00 0.00 0.00 2.24
298 299 6.307915 GCAAACGAGGAGAAAAGAAGATTAC 58.692 40.000 0.00 0.00 0.00 1.89
299 300 5.411669 GGCAAACGAGGAGAAAAGAAGATTA 59.588 40.000 0.00 0.00 0.00 1.75
300 301 4.216472 GGCAAACGAGGAGAAAAGAAGATT 59.784 41.667 0.00 0.00 0.00 2.40
301 302 3.753797 GGCAAACGAGGAGAAAAGAAGAT 59.246 43.478 0.00 0.00 0.00 2.40
302 303 3.139077 GGCAAACGAGGAGAAAAGAAGA 58.861 45.455 0.00 0.00 0.00 2.87
303 304 2.226674 GGGCAAACGAGGAGAAAAGAAG 59.773 50.000 0.00 0.00 0.00 2.85
304 305 2.227194 GGGCAAACGAGGAGAAAAGAA 58.773 47.619 0.00 0.00 0.00 2.52
305 306 1.544759 GGGGCAAACGAGGAGAAAAGA 60.545 52.381 0.00 0.00 0.00 2.52
306 307 0.881796 GGGGCAAACGAGGAGAAAAG 59.118 55.000 0.00 0.00 0.00 2.27
307 308 0.887387 CGGGGCAAACGAGGAGAAAA 60.887 55.000 0.00 0.00 0.00 2.29
308 309 1.302192 CGGGGCAAACGAGGAGAAA 60.302 57.895 0.00 0.00 0.00 2.52
309 310 2.047213 AACGGGGCAAACGAGGAGAA 62.047 55.000 0.00 0.00 34.93 2.87
310 311 2.444700 GAACGGGGCAAACGAGGAGA 62.445 60.000 0.00 0.00 34.93 3.71
311 312 2.032071 AACGGGGCAAACGAGGAG 59.968 61.111 0.00 0.00 34.93 3.69
312 313 2.031465 GAACGGGGCAAACGAGGA 59.969 61.111 0.00 0.00 34.93 3.71
313 314 1.574702 GAAGAACGGGGCAAACGAGG 61.575 60.000 0.00 0.00 34.93 4.63
314 315 1.866925 GAAGAACGGGGCAAACGAG 59.133 57.895 0.00 0.00 34.93 4.18
315 316 1.957186 CGAAGAACGGGGCAAACGA 60.957 57.895 0.00 0.00 38.46 3.85
316 317 2.554272 CGAAGAACGGGGCAAACG 59.446 61.111 0.00 0.00 38.46 3.60
317 318 1.792118 AAGCGAAGAACGGGGCAAAC 61.792 55.000 0.00 0.00 42.83 2.93
318 319 1.512156 GAAGCGAAGAACGGGGCAAA 61.512 55.000 0.00 0.00 42.83 3.68
319 320 1.964373 GAAGCGAAGAACGGGGCAA 60.964 57.895 0.00 0.00 42.83 4.52
320 321 2.358247 GAAGCGAAGAACGGGGCA 60.358 61.111 0.00 0.00 42.83 5.36
321 322 1.636570 GAAGAAGCGAAGAACGGGGC 61.637 60.000 0.00 0.00 42.83 5.80
322 323 0.320421 TGAAGAAGCGAAGAACGGGG 60.320 55.000 0.00 0.00 42.83 5.73
323 324 1.508632 TTGAAGAAGCGAAGAACGGG 58.491 50.000 0.00 0.00 42.83 5.28
324 325 3.482786 CATTTGAAGAAGCGAAGAACGG 58.517 45.455 0.00 0.00 42.83 4.44
325 326 3.482786 CCATTTGAAGAAGCGAAGAACG 58.517 45.455 0.00 0.00 45.66 3.95
326 327 3.057946 AGCCATTTGAAGAAGCGAAGAAC 60.058 43.478 0.00 0.00 0.00 3.01
327 328 3.058016 CAGCCATTTGAAGAAGCGAAGAA 60.058 43.478 0.00 0.00 0.00 2.52
328 329 2.485426 CAGCCATTTGAAGAAGCGAAGA 59.515 45.455 0.00 0.00 0.00 2.87
329 330 2.860062 CAGCCATTTGAAGAAGCGAAG 58.140 47.619 0.00 0.00 0.00 3.79
330 331 1.068333 GCAGCCATTTGAAGAAGCGAA 60.068 47.619 0.00 0.00 0.00 4.70
331 332 0.523072 GCAGCCATTTGAAGAAGCGA 59.477 50.000 0.00 0.00 0.00 4.93
332 333 0.524862 AGCAGCCATTTGAAGAAGCG 59.475 50.000 0.00 0.00 0.00 4.68
333 334 2.738013 AAGCAGCCATTTGAAGAAGC 57.262 45.000 0.00 0.00 0.00 3.86
334 335 4.730657 CTGTAAGCAGCCATTTGAAGAAG 58.269 43.478 0.00 0.00 35.77 2.85
335 336 4.771590 CTGTAAGCAGCCATTTGAAGAA 57.228 40.909 0.00 0.00 35.77 2.52
350 351 1.290203 CGTAGTGCCATGGCTGTAAG 58.710 55.000 35.53 23.39 42.51 2.34
351 352 0.107897 CCGTAGTGCCATGGCTGTAA 60.108 55.000 35.53 14.65 42.51 2.41
352 353 1.261938 ACCGTAGTGCCATGGCTGTA 61.262 55.000 35.53 23.53 42.51 2.74
353 354 2.268920 CCGTAGTGCCATGGCTGT 59.731 61.111 35.53 24.57 42.51 4.40
354 355 2.108514 CACCGTAGTGCCATGGCTG 61.109 63.158 35.53 20.54 42.51 4.85
355 356 2.268920 CACCGTAGTGCCATGGCT 59.731 61.111 35.53 20.42 42.51 4.75
364 365 2.233922 AGCTTACATTGAGCACCGTAGT 59.766 45.455 0.00 0.00 42.56 2.73
365 366 2.893637 AGCTTACATTGAGCACCGTAG 58.106 47.619 0.00 0.00 42.56 3.51
366 367 3.259064 GAAGCTTACATTGAGCACCGTA 58.741 45.455 0.00 0.00 42.56 4.02
367 368 2.076863 GAAGCTTACATTGAGCACCGT 58.923 47.619 0.00 0.00 42.56 4.83
368 369 2.076100 TGAAGCTTACATTGAGCACCG 58.924 47.619 0.00 0.00 42.56 4.94
369 370 3.441572 ACATGAAGCTTACATTGAGCACC 59.558 43.478 0.00 0.00 42.56 5.01
370 371 4.691860 ACATGAAGCTTACATTGAGCAC 57.308 40.909 0.00 0.00 42.56 4.40
371 372 7.121020 TCAATTACATGAAGCTTACATTGAGCA 59.879 33.333 0.00 0.00 42.56 4.26
372 373 7.430502 GTCAATTACATGAAGCTTACATTGAGC 59.569 37.037 0.00 0.00 40.43 4.26
373 374 7.912250 GGTCAATTACATGAAGCTTACATTGAG 59.088 37.037 0.00 0.00 0.00 3.02
374 375 7.392953 TGGTCAATTACATGAAGCTTACATTGA 59.607 33.333 0.00 4.84 0.00 2.57
375 376 7.537715 TGGTCAATTACATGAAGCTTACATTG 58.462 34.615 0.00 2.55 0.00 2.82
376 377 7.701539 TGGTCAATTACATGAAGCTTACATT 57.298 32.000 0.00 0.16 0.00 2.71
377 378 7.886629 ATGGTCAATTACATGAAGCTTACAT 57.113 32.000 0.00 2.09 0.00 2.29
378 379 7.362834 CCAATGGTCAATTACATGAAGCTTACA 60.363 37.037 0.00 0.00 0.00 2.41
379 380 6.974622 CCAATGGTCAATTACATGAAGCTTAC 59.025 38.462 0.00 0.00 0.00 2.34
380 381 6.663093 ACCAATGGTCAATTACATGAAGCTTA 59.337 34.615 0.00 0.00 0.00 3.09
381 382 5.481473 ACCAATGGTCAATTACATGAAGCTT 59.519 36.000 0.00 0.00 0.00 3.74
382 383 5.018809 ACCAATGGTCAATTACATGAAGCT 58.981 37.500 0.00 0.00 0.00 3.74
383 384 5.329035 ACCAATGGTCAATTACATGAAGC 57.671 39.130 0.00 0.00 0.00 3.86
397 398 1.281925 CCAGGCCTAGGACCAATGGT 61.282 60.000 12.37 3.74 39.44 3.55
398 399 1.533711 CCAGGCCTAGGACCAATGG 59.466 63.158 12.37 9.29 0.00 3.16
399 400 1.152881 GCCAGGCCTAGGACCAATG 60.153 63.158 21.37 2.62 0.00 2.82
400 401 2.386935 GGCCAGGCCTAGGACCAAT 61.387 63.158 24.99 0.00 46.69 3.16
401 402 3.015145 GGCCAGGCCTAGGACCAA 61.015 66.667 24.99 0.00 46.69 3.67
411 412 3.893326 ATATTTCAAAACAGGCCAGGC 57.107 42.857 5.01 1.26 0.00 4.85
412 413 7.287696 ACCTTATATATTTCAAAACAGGCCAGG 59.712 37.037 5.01 0.00 0.00 4.45
413 414 8.237811 ACCTTATATATTTCAAAACAGGCCAG 57.762 34.615 5.01 0.00 0.00 4.85
414 415 9.349713 CTACCTTATATATTTCAAAACAGGCCA 57.650 33.333 5.01 0.00 0.00 5.36
415 416 9.569122 TCTACCTTATATATTTCAAAACAGGCC 57.431 33.333 0.00 0.00 0.00 5.19
439 440 9.745018 TTGAAATGAAAAGGTAGATGAGATTCT 57.255 29.630 0.00 0.00 0.00 2.40
512 513 3.313526 GGTGTAAGACCGCTCGTAATAGA 59.686 47.826 0.00 0.00 34.02 1.98
548 549 2.799126 TGCCGGACAACTGGATTAAT 57.201 45.000 5.05 0.00 44.87 1.40
575 576 9.256228 AGTCATAAGTACTCCTGTAATTCTTCA 57.744 33.333 0.00 0.00 37.92 3.02
711 713 6.208599 CAGAGAGGATAAGAGAGGGTCATAAC 59.791 46.154 0.00 0.00 0.00 1.89
727 729 2.841988 GCGGAGGCCAGAGAGGAT 60.842 66.667 5.01 0.00 41.22 3.24
810 824 0.654683 GCGTGAGAATGTGAGATGGC 59.345 55.000 0.00 0.00 0.00 4.40
1125 1139 1.268335 GCGCCGTTGAAGTTGAAAGAA 60.268 47.619 0.00 0.00 0.00 2.52
1188 1202 6.389091 TCATGCATCAACCACTTGTAAATTC 58.611 36.000 0.00 0.00 0.00 2.17
1198 1212 8.931385 AGTATTAAATTTCATGCATCAACCAC 57.069 30.769 0.00 0.00 0.00 4.16
1222 1236 9.477484 AATATATTGACGTGGTTTTCTAGCTAG 57.523 33.333 15.01 15.01 0.00 3.42
1223 1237 9.826574 AAATATATTGACGTGGTTTTCTAGCTA 57.173 29.630 0.00 0.00 0.00 3.32
1224 1238 8.732746 AAATATATTGACGTGGTTTTCTAGCT 57.267 30.769 0.00 0.00 0.00 3.32
1331 1354 1.322442 GGCAAACTCTGTGGCTCTTT 58.678 50.000 0.00 0.00 38.46 2.52
1363 1386 3.076785 TGTGGTTATCCTTGGGGTTGATT 59.923 43.478 0.00 0.00 34.23 2.57
1446 1475 7.148540 GCGTACAACATAAGTTAATTCCTGTCA 60.149 37.037 0.00 0.00 35.85 3.58
1456 1485 5.409214 GGAACCAAGCGTACAACATAAGTTA 59.591 40.000 0.00 0.00 35.85 2.24
1524 1553 2.013400 TGCGTGACATTGTGAAGTTGT 58.987 42.857 0.00 0.00 0.00 3.32
1525 1554 2.753989 TGCGTGACATTGTGAAGTTG 57.246 45.000 0.00 0.00 0.00 3.16
1526 1555 2.605338 GCATGCGTGACATTGTGAAGTT 60.605 45.455 10.93 0.00 36.64 2.66
1527 1556 1.069022 GCATGCGTGACATTGTGAAGT 60.069 47.619 10.93 0.00 36.64 3.01
1528 1557 1.069091 TGCATGCGTGACATTGTGAAG 60.069 47.619 14.09 0.00 36.64 3.02
1529 1558 0.950116 TGCATGCGTGACATTGTGAA 59.050 45.000 14.09 0.00 36.64 3.18
1530 1559 1.135632 CATGCATGCGTGACATTGTGA 60.136 47.619 31.95 0.74 36.64 3.58
1535 1564 1.708193 CGTCCATGCATGCGTGACAT 61.708 55.000 35.91 11.50 40.66 3.06
1573 1602 1.441729 GCCCGTCATTCATCTCGGA 59.558 57.895 4.00 0.00 44.86 4.55
1588 1617 4.973055 TACACACACGCACCGCCC 62.973 66.667 0.00 0.00 0.00 6.13
1589 1618 2.740826 ATACACACACGCACCGCC 60.741 61.111 0.00 0.00 0.00 6.13
1653 1682 2.194326 GGGATGCCCAGCTCCTTC 59.806 66.667 0.00 0.00 44.65 3.46
1764 1793 1.279846 GGAATAACGGGGAGGTTGTCA 59.720 52.381 0.00 0.00 0.00 3.58
1782 1811 1.069090 GGTATGATCGGCAAGCGGA 59.931 57.895 4.77 4.77 0.00 5.54
1794 1823 0.180171 CGGCCATGGTGAAGGTATGA 59.820 55.000 14.67 0.00 0.00 2.15
1859 1888 0.909610 CAGGGGAGGAGCTTGTACCA 60.910 60.000 0.18 0.00 0.00 3.25
1923 1952 1.375396 ACGCTGCATCGCCTTGTTA 60.375 52.632 10.32 0.00 0.00 2.41
2063 2092 2.028476 CCTAATATCCCATCCGCGACAA 60.028 50.000 8.23 0.00 0.00 3.18
2178 2207 2.875933 GGTGACGAGATTTGGACAAACA 59.124 45.455 0.00 0.00 32.51 2.83
2214 2243 1.154035 GCAACAAGTGTATGGCGGC 60.154 57.895 0.00 0.00 0.00 6.53
2215 2244 0.447801 GAGCAACAAGTGTATGGCGG 59.552 55.000 0.00 0.00 0.00 6.13
2235 2264 0.461870 TGGAGTCGGCGAATTGATGG 60.462 55.000 12.92 0.00 0.00 3.51
2237 2266 0.811616 GCTGGAGTCGGCGAATTGAT 60.812 55.000 12.92 0.00 35.34 2.57
2245 2274 2.107953 GAGATGGCTGGAGTCGGC 59.892 66.667 0.00 0.00 44.31 5.54
2319 2350 5.231702 ACGGAGGGAGTATGTGTTAAAAA 57.768 39.130 0.00 0.00 0.00 1.94
2333 2364 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
2334 2365 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
2335 2366 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
2351 2382 9.204570 CCTTGTCGAAATCTCTAAAAAGACTTA 57.795 33.333 0.00 0.00 0.00 2.24
2352 2383 7.173390 CCCTTGTCGAAATCTCTAAAAAGACTT 59.827 37.037 0.00 0.00 0.00 3.01
2353 2384 6.651225 CCCTTGTCGAAATCTCTAAAAAGACT 59.349 38.462 0.00 0.00 0.00 3.24
2354 2385 6.649557 TCCCTTGTCGAAATCTCTAAAAAGAC 59.350 38.462 0.00 0.00 0.00 3.01
2355 2386 6.649557 GTCCCTTGTCGAAATCTCTAAAAAGA 59.350 38.462 0.00 0.00 0.00 2.52
2356 2387 6.651225 AGTCCCTTGTCGAAATCTCTAAAAAG 59.349 38.462 0.00 0.00 0.00 2.27
2357 2388 6.531021 AGTCCCTTGTCGAAATCTCTAAAAA 58.469 36.000 0.00 0.00 0.00 1.94
2358 2389 6.110411 AGTCCCTTGTCGAAATCTCTAAAA 57.890 37.500 0.00 0.00 0.00 1.52
2359 2390 5.740290 AGTCCCTTGTCGAAATCTCTAAA 57.260 39.130 0.00 0.00 0.00 1.85
2360 2391 5.713389 TGTAGTCCCTTGTCGAAATCTCTAA 59.287 40.000 0.00 0.00 0.00 2.10
2361 2392 5.258841 TGTAGTCCCTTGTCGAAATCTCTA 58.741 41.667 0.00 0.00 0.00 2.43
2362 2393 4.087182 TGTAGTCCCTTGTCGAAATCTCT 58.913 43.478 0.00 0.00 0.00 3.10
2363 2394 4.451629 TGTAGTCCCTTGTCGAAATCTC 57.548 45.455 0.00 0.00 0.00 2.75
2364 2395 5.450137 CGTATGTAGTCCCTTGTCGAAATCT 60.450 44.000 0.00 0.00 0.00 2.40
2365 2396 4.738740 CGTATGTAGTCCCTTGTCGAAATC 59.261 45.833 0.00 0.00 0.00 2.17
2366 2397 4.441079 CCGTATGTAGTCCCTTGTCGAAAT 60.441 45.833 0.00 0.00 0.00 2.17
2367 2398 3.119388 CCGTATGTAGTCCCTTGTCGAAA 60.119 47.826 0.00 0.00 0.00 3.46
2368 2399 2.424601 CCGTATGTAGTCCCTTGTCGAA 59.575 50.000 0.00 0.00 0.00 3.71
2369 2400 2.019249 CCGTATGTAGTCCCTTGTCGA 58.981 52.381 0.00 0.00 0.00 4.20
2370 2401 2.019249 TCCGTATGTAGTCCCTTGTCG 58.981 52.381 0.00 0.00 0.00 4.35
2371 2402 2.223758 GCTCCGTATGTAGTCCCTTGTC 60.224 54.545 0.00 0.00 0.00 3.18
2372 2403 1.755380 GCTCCGTATGTAGTCCCTTGT 59.245 52.381 0.00 0.00 0.00 3.16
2373 2404 1.754803 TGCTCCGTATGTAGTCCCTTG 59.245 52.381 0.00 0.00 0.00 3.61
2374 2405 2.154567 TGCTCCGTATGTAGTCCCTT 57.845 50.000 0.00 0.00 0.00 3.95
2375 2406 2.154567 TTGCTCCGTATGTAGTCCCT 57.845 50.000 0.00 0.00 0.00 4.20
2376 2407 2.973694 TTTGCTCCGTATGTAGTCCC 57.026 50.000 0.00 0.00 0.00 4.46
2377 2408 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
2378 2409 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2379 2410 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2380 2411 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2381 2412 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2382 2413 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2383 2414 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2384 2415 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2385 2416 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2386 2417 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2387 2418 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2388 2419 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2389 2420 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2463 2494 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
2464 2495 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
2465 2496 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
2466 2497 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
2467 2498 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
2468 2499 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2469 2500 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2470 2501 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2471 2502 6.207417 CGTACTCCCTCCGTTCCTAAATATAA 59.793 42.308 0.00 0.00 0.00 0.98
2472 2503 5.707298 CGTACTCCCTCCGTTCCTAAATATA 59.293 44.000 0.00 0.00 0.00 0.86
2473 2504 4.522022 CGTACTCCCTCCGTTCCTAAATAT 59.478 45.833 0.00 0.00 0.00 1.28
2474 2505 3.885297 CGTACTCCCTCCGTTCCTAAATA 59.115 47.826 0.00 0.00 0.00 1.40
2475 2506 2.692041 CGTACTCCCTCCGTTCCTAAAT 59.308 50.000 0.00 0.00 0.00 1.40
2476 2507 2.094675 CGTACTCCCTCCGTTCCTAAA 58.905 52.381 0.00 0.00 0.00 1.85
2477 2508 1.004745 ACGTACTCCCTCCGTTCCTAA 59.995 52.381 0.00 0.00 0.00 2.69
2478 2509 0.620556 ACGTACTCCCTCCGTTCCTA 59.379 55.000 0.00 0.00 0.00 2.94
2479 2510 0.251519 AACGTACTCCCTCCGTTCCT 60.252 55.000 0.00 0.00 40.46 3.36
2480 2511 1.463674 TAACGTACTCCCTCCGTTCC 58.536 55.000 0.00 0.00 43.09 3.62
2481 2512 2.228822 TGTTAACGTACTCCCTCCGTTC 59.771 50.000 0.26 0.00 43.09 3.95
2482 2513 2.238521 TGTTAACGTACTCCCTCCGTT 58.761 47.619 0.26 0.00 45.65 4.44
2483 2514 1.909700 TGTTAACGTACTCCCTCCGT 58.090 50.000 0.26 0.00 36.17 4.69
2484 2515 3.302365 TTTGTTAACGTACTCCCTCCG 57.698 47.619 0.26 0.00 0.00 4.63
2485 2516 5.702209 TGAAATTTGTTAACGTACTCCCTCC 59.298 40.000 0.00 0.00 0.00 4.30
2486 2517 6.128363 CCTGAAATTTGTTAACGTACTCCCTC 60.128 42.308 0.00 0.00 0.00 4.30
2517 2548 6.850752 AAACTCCATGTTTAAGTTATGGGG 57.149 37.500 11.10 11.10 46.01 4.96
2550 3300 2.934838 AAATGGGAGGGGGTGCAGG 61.935 63.158 0.00 0.00 0.00 4.85
2584 3339 4.219115 TGGGTTTGCCTTGAAACATCTAA 58.781 39.130 0.00 0.00 37.53 2.10
2613 3368 2.793946 GCGCGGTTTGATGCATCT 59.206 55.556 26.32 0.00 0.00 2.90
2627 3382 3.346631 TTCCGACCCTTACTCGCGC 62.347 63.158 0.00 0.00 0.00 6.86
2639 3394 1.963172 AAAGGACAAGTGGTTCCGAC 58.037 50.000 0.00 0.00 0.00 4.79
2652 3409 9.342308 TCATATTAGGATCACATGAAAAAGGAC 57.658 33.333 0.00 0.00 0.00 3.85
2677 3434 3.960571 TCACACCCCTAGTAGTGTACTC 58.039 50.000 13.06 0.00 45.20 2.59
2678 3435 4.043812 TCTTCACACCCCTAGTAGTGTACT 59.956 45.833 13.06 0.00 45.20 2.73
2683 3440 3.829728 ACTCTTCACACCCCTAGTAGT 57.170 47.619 0.00 0.00 0.00 2.73
2684 3441 4.597004 TGTACTCTTCACACCCCTAGTAG 58.403 47.826 0.00 0.00 0.00 2.57
2685 3442 4.662966 TGTACTCTTCACACCCCTAGTA 57.337 45.455 0.00 0.00 0.00 1.82
2749 3506 4.796231 CCCAAGTCGCCCGAGACG 62.796 72.222 0.00 0.00 45.26 4.18
2758 3515 2.815647 GAAGAGCCGCCCAAGTCG 60.816 66.667 0.00 0.00 0.00 4.18
2759 3516 0.889186 TTTGAAGAGCCGCCCAAGTC 60.889 55.000 0.00 0.00 0.00 3.01
2760 3517 1.150536 TTTGAAGAGCCGCCCAAGT 59.849 52.632 0.00 0.00 0.00 3.16
2761 3518 1.581447 GTTTGAAGAGCCGCCCAAG 59.419 57.895 0.00 0.00 0.00 3.61
2762 3519 1.901464 GGTTTGAAGAGCCGCCCAA 60.901 57.895 0.00 0.00 0.00 4.12
2763 3520 2.282180 GGTTTGAAGAGCCGCCCA 60.282 61.111 0.00 0.00 0.00 5.36
2764 3521 2.193087 TAGGGTTTGAAGAGCCGCCC 62.193 60.000 0.00 0.00 42.00 6.13
2765 3522 0.744771 CTAGGGTTTGAAGAGCCGCC 60.745 60.000 0.00 0.00 42.00 6.13
2766 3523 1.369839 GCTAGGGTTTGAAGAGCCGC 61.370 60.000 0.00 0.00 42.00 6.53
2767 3524 0.744771 GGCTAGGGTTTGAAGAGCCG 60.745 60.000 0.00 0.00 43.05 5.52
2768 3525 3.176728 GGCTAGGGTTTGAAGAGCC 57.823 57.895 0.00 0.00 45.48 4.70
2769 3526 1.369839 GCGGCTAGGGTTTGAAGAGC 61.370 60.000 0.00 0.00 0.00 4.09
2770 3527 0.250513 AGCGGCTAGGGTTTGAAGAG 59.749 55.000 0.00 0.00 0.00 2.85
2771 3528 1.480954 CTAGCGGCTAGGGTTTGAAGA 59.519 52.381 25.85 0.00 31.03 2.87
2772 3529 1.941325 CTAGCGGCTAGGGTTTGAAG 58.059 55.000 25.85 2.80 31.03 3.02
2781 3538 1.756950 TGGTGACCCTAGCGGCTAG 60.757 63.158 26.43 26.43 34.16 3.42
2782 3539 2.056223 GTGGTGACCCTAGCGGCTA 61.056 63.158 9.71 9.71 33.26 3.93
2783 3540 3.391382 GTGGTGACCCTAGCGGCT 61.391 66.667 7.98 7.98 33.26 5.52
2784 3541 4.468689 GGTGGTGACCCTAGCGGC 62.469 72.222 0.00 0.00 36.03 6.53
2785 3542 3.000819 TGGTGGTGACCCTAGCGG 61.001 66.667 0.00 0.00 42.34 5.52
2786 3543 2.264794 GTGGTGGTGACCCTAGCG 59.735 66.667 0.00 0.00 42.34 4.26
2787 3544 1.900545 GAGGTGGTGGTGACCCTAGC 61.901 65.000 0.00 0.00 42.34 3.42
2788 3545 1.265454 GGAGGTGGTGGTGACCCTAG 61.265 65.000 0.00 0.00 42.34 3.02
2789 3546 1.229400 GGAGGTGGTGGTGACCCTA 60.229 63.158 0.00 0.00 42.34 3.53
2790 3547 2.529389 GGAGGTGGTGGTGACCCT 60.529 66.667 0.00 0.00 42.34 4.34
2791 3548 2.198304 GATGGAGGTGGTGGTGACCC 62.198 65.000 0.00 0.00 42.34 4.46
2792 3549 1.299976 GATGGAGGTGGTGGTGACC 59.700 63.158 0.00 0.00 43.48 4.02
2793 3550 1.299976 GGATGGAGGTGGTGGTGAC 59.700 63.158 0.00 0.00 0.00 3.67
2794 3551 1.923395 GGGATGGAGGTGGTGGTGA 60.923 63.158 0.00 0.00 0.00 4.02
2795 3552 1.500783 AAGGGATGGAGGTGGTGGTG 61.501 60.000 0.00 0.00 0.00 4.17
2796 3553 1.151587 AAGGGATGGAGGTGGTGGT 60.152 57.895 0.00 0.00 0.00 4.16
2797 3554 1.609783 GAAGGGATGGAGGTGGTGG 59.390 63.158 0.00 0.00 0.00 4.61
2798 3555 1.609783 GGAAGGGATGGAGGTGGTG 59.390 63.158 0.00 0.00 0.00 4.17
2799 3556 1.619669 GGGAAGGGATGGAGGTGGT 60.620 63.158 0.00 0.00 0.00 4.16
2800 3557 1.308216 AGGGAAGGGATGGAGGTGG 60.308 63.158 0.00 0.00 0.00 4.61
2801 3558 1.348775 GGAGGGAAGGGATGGAGGTG 61.349 65.000 0.00 0.00 0.00 4.00
2802 3559 1.004891 GGAGGGAAGGGATGGAGGT 59.995 63.158 0.00 0.00 0.00 3.85
2803 3560 2.143419 CGGAGGGAAGGGATGGAGG 61.143 68.421 0.00 0.00 0.00 4.30
2804 3561 2.812619 GCGGAGGGAAGGGATGGAG 61.813 68.421 0.00 0.00 0.00 3.86
2805 3562 2.768344 GCGGAGGGAAGGGATGGA 60.768 66.667 0.00 0.00 0.00 3.41
2806 3563 3.878667 GGCGGAGGGAAGGGATGG 61.879 72.222 0.00 0.00 0.00 3.51
2807 3564 4.241555 CGGCGGAGGGAAGGGATG 62.242 72.222 0.00 0.00 0.00 3.51
2865 3622 3.358076 GAAGGAGTCTCCGCCACCG 62.358 68.421 13.41 0.00 42.75 4.94
2866 3623 2.579738 GAAGGAGTCTCCGCCACC 59.420 66.667 13.41 0.00 42.75 4.61
2867 3624 1.985116 AGGAAGGAGTCTCCGCCAC 60.985 63.158 26.24 14.22 42.75 5.01
2868 3625 1.984570 CAGGAAGGAGTCTCCGCCA 60.985 63.158 26.24 0.00 42.75 5.69
2869 3626 2.726351 CCAGGAAGGAGTCTCCGCC 61.726 68.421 20.38 20.38 42.75 6.13
2870 3627 1.682684 TCCAGGAAGGAGTCTCCGC 60.683 63.158 13.41 9.46 43.07 5.54
2871 3628 4.766272 TCCAGGAAGGAGTCTCCG 57.234 61.111 13.41 0.00 43.07 4.63
2879 3636 1.141881 CCGACGTGATCCAGGAAGG 59.858 63.158 0.00 0.00 39.47 3.46
2880 3637 0.101399 CTCCGACGTGATCCAGGAAG 59.899 60.000 0.00 0.00 0.00 3.46
2881 3638 1.320344 CCTCCGACGTGATCCAGGAA 61.320 60.000 0.00 0.00 0.00 3.36
2882 3639 1.753078 CCTCCGACGTGATCCAGGA 60.753 63.158 0.00 0.00 0.00 3.86
2883 3640 2.786495 CCCTCCGACGTGATCCAGG 61.786 68.421 0.00 0.00 0.00 4.45
2884 3641 2.786495 CCCCTCCGACGTGATCCAG 61.786 68.421 0.00 0.00 0.00 3.86
2885 3642 2.758327 CCCCTCCGACGTGATCCA 60.758 66.667 0.00 0.00 0.00 3.41
2886 3643 3.537874 CCCCCTCCGACGTGATCC 61.538 72.222 0.00 0.00 0.00 3.36
2887 3644 2.758737 ACCCCCTCCGACGTGATC 60.759 66.667 0.00 0.00 0.00 2.92
2888 3645 3.075005 CACCCCCTCCGACGTGAT 61.075 66.667 0.00 0.00 0.00 3.06
2906 3663 4.489771 CATGTGGAGGTCCCGCCC 62.490 72.222 3.49 0.00 44.86 6.13
2909 3666 4.082523 ACGCATGTGGAGGTCCCG 62.083 66.667 11.65 0.00 37.93 5.14
2910 3667 2.436646 CACGCATGTGGAGGTCCC 60.437 66.667 11.65 0.00 42.59 4.46
2911 3668 1.741770 GTCACGCATGTGGAGGTCC 60.742 63.158 11.65 0.00 46.42 4.46
2912 3669 2.094659 CGTCACGCATGTGGAGGTC 61.095 63.158 11.65 0.00 46.42 3.85
2913 3670 2.048222 CGTCACGCATGTGGAGGT 60.048 61.111 11.65 0.00 46.42 3.85
2914 3671 2.815211 CCGTCACGCATGTGGAGG 60.815 66.667 11.65 10.15 46.42 4.30
2915 3672 3.490759 GCCGTCACGCATGTGGAG 61.491 66.667 11.65 2.87 46.42 3.86
2933 3690 0.882042 ATGGATCAGATCGCCGTTGC 60.882 55.000 4.23 0.00 0.00 4.17
2934 3691 0.863799 CATGGATCAGATCGCCGTTG 59.136 55.000 4.23 0.00 0.00 4.10
2935 3692 0.250038 CCATGGATCAGATCGCCGTT 60.250 55.000 5.56 0.00 0.00 4.44
2936 3693 1.368950 CCATGGATCAGATCGCCGT 59.631 57.895 5.56 0.00 0.00 5.68
2937 3694 0.947660 CACCATGGATCAGATCGCCG 60.948 60.000 21.47 0.00 0.00 6.46
2938 3695 0.604780 CCACCATGGATCAGATCGCC 60.605 60.000 21.47 0.00 40.96 5.54
2939 3696 1.233285 GCCACCATGGATCAGATCGC 61.233 60.000 21.47 3.69 40.96 4.58
2940 3697 0.947660 CGCCACCATGGATCAGATCG 60.948 60.000 21.47 7.73 40.96 3.69
2941 3698 1.233285 GCGCCACCATGGATCAGATC 61.233 60.000 21.47 1.18 40.96 2.75
2942 3699 1.228063 GCGCCACCATGGATCAGAT 60.228 57.895 21.47 0.00 40.96 2.90
2943 3700 2.190313 GCGCCACCATGGATCAGA 59.810 61.111 21.47 0.00 40.96 3.27
2944 3701 3.274586 CGCGCCACCATGGATCAG 61.275 66.667 21.47 8.19 40.96 2.90
2945 3702 4.854924 CCGCGCCACCATGGATCA 62.855 66.667 21.47 0.00 40.96 2.92
2946 3703 4.856801 ACCGCGCCACCATGGATC 62.857 66.667 21.47 5.66 40.96 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.