Multiple sequence alignment - TraesCS1B01G114300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G114300 chr1B 100.000 2866 0 0 1 2866 133428772 133431637 0.000000e+00 5293.0
1 TraesCS1B01G114300 chr1B 91.296 517 43 2 1354 1869 133106547 133107062 0.000000e+00 704.0
2 TraesCS1B01G114300 chr1B 87.131 474 24 24 1 469 498633920 498633479 1.190000e-138 503.0
3 TraesCS1B01G114300 chr1B 90.058 171 17 0 986 1156 133106106 133106276 3.720000e-54 222.0
4 TraesCS1B01G114300 chr1D 90.591 1743 104 27 484 2199 80632931 80634640 0.000000e+00 2255.0
5 TraesCS1B01G114300 chr1D 85.795 704 72 11 1192 1869 80550193 80550894 0.000000e+00 721.0
6 TraesCS1B01G114300 chr1D 88.889 171 19 0 986 1156 80549928 80550098 8.050000e-51 211.0
7 TraesCS1B01G114300 chr1D 92.157 51 3 1 1473 1523 6764536 6764585 1.420000e-08 71.3
8 TraesCS1B01G114300 chr1A 88.334 1543 137 23 680 2197 99148434 99149958 0.000000e+00 1812.0
9 TraesCS1B01G114300 chr1A 89.720 535 50 3 1354 1884 99139442 99139975 0.000000e+00 678.0
10 TraesCS1B01G114300 chr1A 81.910 597 70 14 2280 2859 99151215 99151790 1.200000e-128 470.0
11 TraesCS1B01G114300 chr1A 88.953 172 17 2 986 1156 99138978 99139148 8.050000e-51 211.0
12 TraesCS1B01G114300 chr1A 82.993 147 23 2 2474 2619 99151813 99151958 6.440000e-27 132.0
13 TraesCS1B01G114300 chr1A 93.478 46 3 0 1473 1518 8197828 8197873 5.120000e-08 69.4
14 TraesCS1B01G114300 chr1A 93.478 46 3 0 1473 1518 8228845 8228890 5.120000e-08 69.4
15 TraesCS1B01G114300 chr7A 98.758 483 6 0 1 483 183916192 183916674 0.000000e+00 859.0
16 TraesCS1B01G114300 chr7A 88.453 459 35 8 26 482 535893778 535894220 3.250000e-149 538.0
17 TraesCS1B01G114300 chr7A 100.000 30 0 0 2015 2044 217232963 217232992 3.990000e-04 56.5
18 TraesCS1B01G114300 chrUn 98.557 485 7 0 1 485 323375953 323375469 0.000000e+00 857.0
19 TraesCS1B01G114300 chrUn 95.349 43 2 0 1476 1518 453819210 453819168 5.120000e-08 69.4
20 TraesCS1B01G114300 chr6A 98.755 482 6 0 1 482 220505041 220505522 0.000000e+00 857.0
21 TraesCS1B01G114300 chr6A 98.755 482 6 0 1 482 220774087 220774568 0.000000e+00 857.0
22 TraesCS1B01G114300 chr6A 95.789 95 4 0 388 482 60378378 60378472 1.380000e-33 154.0
23 TraesCS1B01G114300 chr5B 98.755 482 6 0 1 482 400930463 400930944 0.000000e+00 857.0
24 TraesCS1B01G114300 chr4A 93.452 168 10 1 26 193 120441606 120441772 6.130000e-62 248.0
25 TraesCS1B01G114300 chr4A 86.486 111 14 1 219 328 120450298 120450408 1.390000e-23 121.0
26 TraesCS1B01G114300 chr3D 88.587 184 18 1 299 482 602826302 602826482 1.340000e-53 220.0
27 TraesCS1B01G114300 chr3D 80.000 185 25 2 2218 2391 382738411 382738228 3.000000e-25 126.0
28 TraesCS1B01G114300 chr3D 100.000 29 0 0 2016 2044 51120282 51120310 1.000000e-03 54.7
29 TraesCS1B01G114300 chr3B 82.278 158 26 2 2463 2619 627195001 627194845 4.980000e-28 135.0
30 TraesCS1B01G114300 chr2B 83.146 89 8 3 2258 2339 435153688 435153600 1.100000e-09 75.0
31 TraesCS1B01G114300 chr2D 80.682 88 16 1 1007 1093 597939534 597939621 1.840000e-07 67.6
32 TraesCS1B01G114300 chr2D 80.682 88 16 1 1007 1093 641960799 641960886 1.840000e-07 67.6
33 TraesCS1B01G114300 chr2D 92.500 40 3 0 1054 1093 597940148 597940187 1.110000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G114300 chr1B 133428772 133431637 2865 False 5293.000000 5293 100.000000 1 2866 1 chr1B.!!$F1 2865
1 TraesCS1B01G114300 chr1B 133106106 133107062 956 False 463.000000 704 90.677000 986 1869 2 chr1B.!!$F2 883
2 TraesCS1B01G114300 chr1D 80632931 80634640 1709 False 2255.000000 2255 90.591000 484 2199 1 chr1D.!!$F2 1715
3 TraesCS1B01G114300 chr1D 80549928 80550894 966 False 466.000000 721 87.342000 986 1869 2 chr1D.!!$F3 883
4 TraesCS1B01G114300 chr1A 99148434 99151958 3524 False 804.666667 1812 84.412333 680 2859 3 chr1A.!!$F4 2179
5 TraesCS1B01G114300 chr1A 99138978 99139975 997 False 444.500000 678 89.336500 986 1884 2 chr1A.!!$F3 898

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
302 303 0.109532 GAGGAGCTAGGGATTTGGGC 59.89 60.0 0.0 0.0 0.0 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2117 2283 1.302033 CCTCCAGCGCCATCATACC 60.302 63.158 2.29 0.0 0.0 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.104530 GCGACGGCCTCCTACTTC 59.895 66.667 0.00 0.00 0.00 3.01
22 23 2.707849 GCGACGGCCTCCTACTTCA 61.708 63.158 0.00 0.00 0.00 3.02
23 24 2.017559 GCGACGGCCTCCTACTTCAT 62.018 60.000 0.00 0.00 0.00 2.57
24 25 1.315690 CGACGGCCTCCTACTTCATA 58.684 55.000 0.00 0.00 0.00 2.15
25 26 1.001597 CGACGGCCTCCTACTTCATAC 60.002 57.143 0.00 0.00 0.00 2.39
26 27 2.308690 GACGGCCTCCTACTTCATACT 58.691 52.381 0.00 0.00 0.00 2.12
27 28 2.293955 GACGGCCTCCTACTTCATACTC 59.706 54.545 0.00 0.00 0.00 2.59
28 29 1.614413 CGGCCTCCTACTTCATACTCC 59.386 57.143 0.00 0.00 0.00 3.85
29 30 1.972075 GGCCTCCTACTTCATACTCCC 59.028 57.143 0.00 0.00 0.00 4.30
30 31 1.614413 GCCTCCTACTTCATACTCCCG 59.386 57.143 0.00 0.00 0.00 5.14
31 32 1.614413 CCTCCTACTTCATACTCCCGC 59.386 57.143 0.00 0.00 0.00 6.13
32 33 2.588620 CTCCTACTTCATACTCCCGCT 58.411 52.381 0.00 0.00 0.00 5.52
33 34 2.294791 CTCCTACTTCATACTCCCGCTG 59.705 54.545 0.00 0.00 0.00 5.18
34 35 2.092049 TCCTACTTCATACTCCCGCTGA 60.092 50.000 0.00 0.00 0.00 4.26
45 46 3.520290 CTCCCGCTGAGTATACAACAA 57.480 47.619 5.50 0.00 36.27 2.83
46 47 3.187700 CTCCCGCTGAGTATACAACAAC 58.812 50.000 5.50 0.17 36.27 3.32
47 48 2.829720 TCCCGCTGAGTATACAACAACT 59.170 45.455 5.50 0.00 0.00 3.16
48 49 3.259876 TCCCGCTGAGTATACAACAACTT 59.740 43.478 5.50 0.00 0.00 2.66
49 50 3.617263 CCCGCTGAGTATACAACAACTTC 59.383 47.826 5.50 0.00 0.00 3.01
50 51 4.242475 CCGCTGAGTATACAACAACTTCA 58.758 43.478 5.50 0.00 0.00 3.02
51 52 4.327357 CCGCTGAGTATACAACAACTTCAG 59.673 45.833 5.50 8.42 0.00 3.02
52 53 5.161358 CGCTGAGTATACAACAACTTCAGA 58.839 41.667 16.17 0.00 0.00 3.27
53 54 5.807520 CGCTGAGTATACAACAACTTCAGAT 59.192 40.000 16.17 0.00 0.00 2.90
54 55 6.020281 CGCTGAGTATACAACAACTTCAGATC 60.020 42.308 16.17 0.00 0.00 2.75
55 56 6.256757 GCTGAGTATACAACAACTTCAGATCC 59.743 42.308 16.17 0.65 0.00 3.36
56 57 7.239763 TGAGTATACAACAACTTCAGATCCA 57.760 36.000 5.50 0.00 0.00 3.41
57 58 7.323420 TGAGTATACAACAACTTCAGATCCAG 58.677 38.462 5.50 0.00 0.00 3.86
58 59 6.109359 AGTATACAACAACTTCAGATCCAGC 58.891 40.000 5.50 0.00 0.00 4.85
59 60 2.508526 ACAACAACTTCAGATCCAGCC 58.491 47.619 0.00 0.00 0.00 4.85
60 61 2.158623 ACAACAACTTCAGATCCAGCCA 60.159 45.455 0.00 0.00 0.00 4.75
61 62 2.486472 ACAACTTCAGATCCAGCCAG 57.514 50.000 0.00 0.00 0.00 4.85
62 63 1.093159 CAACTTCAGATCCAGCCAGC 58.907 55.000 0.00 0.00 0.00 4.85
63 64 0.694771 AACTTCAGATCCAGCCAGCA 59.305 50.000 0.00 0.00 0.00 4.41
64 65 0.252479 ACTTCAGATCCAGCCAGCAG 59.748 55.000 0.00 0.00 0.00 4.24
65 66 1.077930 TTCAGATCCAGCCAGCAGC 60.078 57.895 0.00 0.00 44.25 5.25
72 73 1.892862 CCAGCCAGCAGCATAGCTC 60.893 63.158 0.00 0.00 44.54 4.09
73 74 1.892862 CAGCCAGCAGCATAGCTCC 60.893 63.158 0.00 0.00 44.54 4.70
74 75 2.071262 AGCCAGCAGCATAGCTCCT 61.071 57.895 0.00 0.00 44.54 3.69
75 76 1.597578 GCCAGCAGCATAGCTCCTC 60.598 63.158 0.00 0.00 44.54 3.71
76 77 1.071128 CCAGCAGCATAGCTCCTCC 59.929 63.158 0.00 0.00 44.54 4.30
77 78 1.071128 CAGCAGCATAGCTCCTCCC 59.929 63.158 0.00 0.00 44.54 4.30
78 79 2.030262 GCAGCATAGCTCCTCCCG 59.970 66.667 0.00 0.00 36.40 5.14
79 80 2.030262 CAGCATAGCTCCTCCCGC 59.970 66.667 0.00 0.00 36.40 6.13
80 81 2.123077 AGCATAGCTCCTCCCGCT 60.123 61.111 0.00 0.00 41.35 5.52
81 82 2.030262 GCATAGCTCCTCCCGCTG 59.970 66.667 0.00 0.00 38.38 5.18
82 83 2.739784 CATAGCTCCTCCCGCTGG 59.260 66.667 0.00 0.00 38.38 4.85
83 84 2.136878 CATAGCTCCTCCCGCTGGT 61.137 63.158 0.00 0.00 38.38 4.00
84 85 1.834822 ATAGCTCCTCCCGCTGGTC 60.835 63.158 0.00 0.00 38.38 4.02
87 88 3.151022 CTCCTCCCGCTGGTCCTC 61.151 72.222 0.00 0.00 0.00 3.71
121 122 4.135153 GCGCTCCTCTCGGCTTGA 62.135 66.667 0.00 0.00 0.00 3.02
122 123 2.202676 CGCTCCTCTCGGCTTGAC 60.203 66.667 0.00 0.00 0.00 3.18
123 124 2.705821 CGCTCCTCTCGGCTTGACT 61.706 63.158 0.00 0.00 0.00 3.41
124 125 1.377366 CGCTCCTCTCGGCTTGACTA 61.377 60.000 0.00 0.00 0.00 2.59
125 126 0.818296 GCTCCTCTCGGCTTGACTAA 59.182 55.000 0.00 0.00 0.00 2.24
126 127 1.204941 GCTCCTCTCGGCTTGACTAAA 59.795 52.381 0.00 0.00 0.00 1.85
127 128 2.353803 GCTCCTCTCGGCTTGACTAAAA 60.354 50.000 0.00 0.00 0.00 1.52
128 129 3.864921 GCTCCTCTCGGCTTGACTAAAAA 60.865 47.826 0.00 0.00 0.00 1.94
147 148 5.468540 AAAAAGGCACCTTTAACTCCATC 57.531 39.130 14.85 0.00 44.50 3.51
148 149 2.403252 AGGCACCTTTAACTCCATCG 57.597 50.000 0.00 0.00 0.00 3.84
149 150 1.906574 AGGCACCTTTAACTCCATCGA 59.093 47.619 0.00 0.00 0.00 3.59
150 151 2.093447 AGGCACCTTTAACTCCATCGAG 60.093 50.000 0.00 0.00 42.32 4.04
151 152 2.093658 GGCACCTTTAACTCCATCGAGA 60.094 50.000 0.00 0.00 38.52 4.04
152 153 3.190874 GCACCTTTAACTCCATCGAGAG 58.809 50.000 0.00 0.37 38.52 3.20
153 154 3.786635 CACCTTTAACTCCATCGAGAGG 58.213 50.000 6.63 3.68 38.52 3.69
154 155 3.195825 CACCTTTAACTCCATCGAGAGGT 59.804 47.826 6.63 2.34 39.20 3.85
155 156 3.195825 ACCTTTAACTCCATCGAGAGGTG 59.804 47.826 2.62 5.07 37.91 4.00
162 163 3.518998 ATCGAGAGGTGACGCGGG 61.519 66.667 12.47 0.00 34.13 6.13
175 176 4.214327 GCGGGGCGAGAGGAAGAG 62.214 72.222 0.00 0.00 0.00 2.85
176 177 3.532155 CGGGGCGAGAGGAAGAGG 61.532 72.222 0.00 0.00 0.00 3.69
177 178 3.855853 GGGGCGAGAGGAAGAGGC 61.856 72.222 0.00 0.00 0.00 4.70
178 179 4.214327 GGGCGAGAGGAAGAGGCG 62.214 72.222 0.00 0.00 0.00 5.52
179 180 3.141488 GGCGAGAGGAAGAGGCGA 61.141 66.667 0.00 0.00 0.00 5.54
180 181 2.103340 GCGAGAGGAAGAGGCGAC 59.897 66.667 0.00 0.00 0.00 5.19
181 182 2.405594 CGAGAGGAAGAGGCGACG 59.594 66.667 0.00 0.00 0.00 5.12
182 183 2.107292 CGAGAGGAAGAGGCGACGA 61.107 63.158 0.00 0.00 0.00 4.20
183 184 1.725066 GAGAGGAAGAGGCGACGAG 59.275 63.158 0.00 0.00 0.00 4.18
184 185 1.720694 GAGAGGAAGAGGCGACGAGG 61.721 65.000 0.00 0.00 0.00 4.63
185 186 2.756283 AGGAAGAGGCGACGAGGG 60.756 66.667 0.00 0.00 0.00 4.30
186 187 4.516195 GGAAGAGGCGACGAGGGC 62.516 72.222 0.00 0.00 0.00 5.19
187 188 3.453679 GAAGAGGCGACGAGGGCT 61.454 66.667 0.00 6.28 46.65 5.19
188 189 2.044252 AAGAGGCGACGAGGGCTA 60.044 61.111 0.00 0.00 43.66 3.93
189 190 2.339100 GAAGAGGCGACGAGGGCTAC 62.339 65.000 0.00 2.30 43.66 3.58
190 191 4.253257 GAGGCGACGAGGGCTACG 62.253 72.222 0.00 0.00 43.66 3.51
195 196 4.549516 GACGAGGGCTACGGCGAC 62.550 72.222 16.62 1.71 39.81 5.19
209 210 3.744719 CGACGTGGGCGAGAAGGA 61.745 66.667 0.00 0.00 42.00 3.36
210 211 2.893398 GACGTGGGCGAGAAGGAT 59.107 61.111 0.00 0.00 42.00 3.24
211 212 1.519455 GACGTGGGCGAGAAGGATG 60.519 63.158 0.00 0.00 42.00 3.51
212 213 2.892425 CGTGGGCGAGAAGGATGC 60.892 66.667 0.00 0.00 41.33 3.91
213 214 2.892425 GTGGGCGAGAAGGATGCG 60.892 66.667 0.00 0.00 0.00 4.73
214 215 4.161295 TGGGCGAGAAGGATGCGG 62.161 66.667 0.00 0.00 0.00 5.69
215 216 4.918201 GGGCGAGAAGGATGCGGG 62.918 72.222 0.00 0.00 0.00 6.13
259 260 4.933064 GCGGCGACATCGGAGGAG 62.933 72.222 12.98 0.00 40.23 3.69
260 261 4.933064 CGGCGACATCGGAGGAGC 62.933 72.222 0.00 1.50 40.23 4.70
261 262 3.532155 GGCGACATCGGAGGAGCT 61.532 66.667 3.08 0.00 40.23 4.09
262 263 2.279120 GCGACATCGGAGGAGCTG 60.279 66.667 3.08 0.00 40.23 4.24
263 264 2.415010 CGACATCGGAGGAGCTGG 59.585 66.667 0.00 0.00 35.37 4.85
264 265 2.818132 GACATCGGAGGAGCTGGG 59.182 66.667 0.00 0.00 0.00 4.45
265 266 2.765807 ACATCGGAGGAGCTGGGG 60.766 66.667 0.00 0.00 0.00 4.96
266 267 2.444706 CATCGGAGGAGCTGGGGA 60.445 66.667 0.00 0.00 0.00 4.81
267 268 1.840650 CATCGGAGGAGCTGGGGAT 60.841 63.158 0.00 0.00 0.00 3.85
268 269 1.074167 ATCGGAGGAGCTGGGGATT 60.074 57.895 0.00 0.00 0.00 3.01
269 270 0.695803 ATCGGAGGAGCTGGGGATTT 60.696 55.000 0.00 0.00 0.00 2.17
270 271 1.153086 CGGAGGAGCTGGGGATTTG 60.153 63.158 0.00 0.00 0.00 2.32
271 272 1.228510 GGAGGAGCTGGGGATTTGG 59.771 63.158 0.00 0.00 0.00 3.28
272 273 1.228510 GAGGAGCTGGGGATTTGGG 59.771 63.158 0.00 0.00 0.00 4.12
273 274 2.442830 GGAGCTGGGGATTTGGGC 60.443 66.667 0.00 0.00 0.00 5.36
274 275 2.830370 GAGCTGGGGATTTGGGCG 60.830 66.667 0.00 0.00 0.00 6.13
275 276 4.447342 AGCTGGGGATTTGGGCGG 62.447 66.667 0.00 0.00 0.00 6.13
280 281 4.796495 GGGATTTGGGCGGCGAGT 62.796 66.667 12.98 0.00 0.00 4.18
281 282 3.202706 GGATTTGGGCGGCGAGTC 61.203 66.667 12.98 1.30 0.00 3.36
282 283 3.564027 GATTTGGGCGGCGAGTCG 61.564 66.667 12.98 8.54 0.00 4.18
291 292 2.516460 GGCGAGTCGGAGGAGCTA 60.516 66.667 15.52 0.00 0.00 3.32
292 293 2.548295 GGCGAGTCGGAGGAGCTAG 61.548 68.421 15.52 0.00 0.00 3.42
293 294 2.548295 GCGAGTCGGAGGAGCTAGG 61.548 68.421 15.52 0.00 0.00 3.02
294 295 1.894756 CGAGTCGGAGGAGCTAGGG 60.895 68.421 4.10 0.00 0.00 3.53
295 296 1.532728 GAGTCGGAGGAGCTAGGGA 59.467 63.158 0.00 0.00 0.00 4.20
296 297 0.111639 GAGTCGGAGGAGCTAGGGAT 59.888 60.000 0.00 0.00 0.00 3.85
297 298 0.558712 AGTCGGAGGAGCTAGGGATT 59.441 55.000 0.00 0.00 0.00 3.01
298 299 1.062810 AGTCGGAGGAGCTAGGGATTT 60.063 52.381 0.00 0.00 0.00 2.17
299 300 1.069358 GTCGGAGGAGCTAGGGATTTG 59.931 57.143 0.00 0.00 0.00 2.32
300 301 0.394565 CGGAGGAGCTAGGGATTTGG 59.605 60.000 0.00 0.00 0.00 3.28
301 302 0.767998 GGAGGAGCTAGGGATTTGGG 59.232 60.000 0.00 0.00 0.00 4.12
302 303 0.109532 GAGGAGCTAGGGATTTGGGC 59.890 60.000 0.00 0.00 0.00 5.36
303 304 1.227973 GGAGCTAGGGATTTGGGCG 60.228 63.158 0.00 0.00 0.00 6.13
304 305 1.227973 GAGCTAGGGATTTGGGCGG 60.228 63.158 0.00 0.00 0.00 6.13
305 306 2.907407 GCTAGGGATTTGGGCGGC 60.907 66.667 0.00 0.00 0.00 6.53
306 307 2.591715 CTAGGGATTTGGGCGGCG 60.592 66.667 0.51 0.51 0.00 6.46
307 308 3.084646 TAGGGATTTGGGCGGCGA 61.085 61.111 12.98 0.00 0.00 5.54
308 309 3.394635 TAGGGATTTGGGCGGCGAC 62.395 63.158 12.98 8.16 0.00 5.19
321 322 3.200593 GCGACGTCGGAGGAGCTA 61.201 66.667 36.13 0.00 40.23 3.32
322 323 3.015677 CGACGTCGGAGGAGCTAG 58.984 66.667 29.70 0.00 35.37 3.42
323 324 2.535788 CGACGTCGGAGGAGCTAGG 61.536 68.421 29.70 0.00 35.37 3.02
324 325 2.124236 ACGTCGGAGGAGCTAGGG 60.124 66.667 4.48 0.00 0.00 3.53
325 326 2.192443 CGTCGGAGGAGCTAGGGA 59.808 66.667 0.00 0.00 0.00 4.20
326 327 1.228306 CGTCGGAGGAGCTAGGGAT 60.228 63.158 0.00 0.00 0.00 3.85
327 328 0.824182 CGTCGGAGGAGCTAGGGATT 60.824 60.000 0.00 0.00 0.00 3.01
328 329 0.963225 GTCGGAGGAGCTAGGGATTC 59.037 60.000 0.00 0.00 0.00 2.52
329 330 0.556258 TCGGAGGAGCTAGGGATTCA 59.444 55.000 0.00 0.00 0.00 2.57
330 331 0.965439 CGGAGGAGCTAGGGATTCAG 59.035 60.000 0.00 0.00 0.00 3.02
331 332 1.347062 GGAGGAGCTAGGGATTCAGG 58.653 60.000 0.00 0.00 0.00 3.86
332 333 1.347062 GAGGAGCTAGGGATTCAGGG 58.653 60.000 0.00 0.00 0.00 4.45
333 334 0.944999 AGGAGCTAGGGATTCAGGGA 59.055 55.000 0.00 0.00 0.00 4.20
334 335 1.132881 AGGAGCTAGGGATTCAGGGAG 60.133 57.143 0.00 0.00 0.00 4.30
335 336 0.684535 GAGCTAGGGATTCAGGGAGC 59.315 60.000 0.00 0.00 0.00 4.70
336 337 1.118356 AGCTAGGGATTCAGGGAGCG 61.118 60.000 0.00 0.00 35.09 5.03
337 338 1.115930 GCTAGGGATTCAGGGAGCGA 61.116 60.000 0.00 0.00 0.00 4.93
338 339 0.676736 CTAGGGATTCAGGGAGCGAC 59.323 60.000 0.00 0.00 0.00 5.19
339 340 0.261991 TAGGGATTCAGGGAGCGACT 59.738 55.000 0.00 0.00 0.00 4.18
340 341 1.144936 GGGATTCAGGGAGCGACTG 59.855 63.158 0.00 0.00 37.30 3.51
341 342 1.144936 GGATTCAGGGAGCGACTGG 59.855 63.158 5.69 0.00 36.62 4.00
342 343 1.617947 GGATTCAGGGAGCGACTGGT 61.618 60.000 5.69 0.00 36.62 4.00
343 344 0.460987 GATTCAGGGAGCGACTGGTG 60.461 60.000 5.69 0.00 36.62 4.17
344 345 0.904865 ATTCAGGGAGCGACTGGTGA 60.905 55.000 5.69 0.00 36.62 4.02
345 346 1.536073 TTCAGGGAGCGACTGGTGAG 61.536 60.000 5.69 0.00 36.62 3.51
346 347 1.979155 CAGGGAGCGACTGGTGAGA 60.979 63.158 0.00 0.00 32.38 3.27
347 348 1.979693 AGGGAGCGACTGGTGAGAC 60.980 63.158 0.00 0.00 0.00 3.36
348 349 2.276116 GGGAGCGACTGGTGAGACA 61.276 63.158 0.00 0.00 0.00 3.41
349 350 1.214062 GGAGCGACTGGTGAGACAG 59.786 63.158 0.00 0.00 44.03 3.51
357 358 2.145958 CTGGTGAGACAGTGAGTGTG 57.854 55.000 0.00 0.00 40.56 3.82
358 359 0.752658 TGGTGAGACAGTGAGTGTGG 59.247 55.000 0.00 0.00 40.56 4.17
359 360 1.040646 GGTGAGACAGTGAGTGTGGA 58.959 55.000 0.00 0.00 40.56 4.02
360 361 1.000283 GGTGAGACAGTGAGTGTGGAG 60.000 57.143 0.00 0.00 40.56 3.86
361 362 1.957177 GTGAGACAGTGAGTGTGGAGA 59.043 52.381 0.00 0.00 40.56 3.71
362 363 2.030363 GTGAGACAGTGAGTGTGGAGAG 60.030 54.545 0.00 0.00 40.56 3.20
363 364 2.235016 GAGACAGTGAGTGTGGAGAGT 58.765 52.381 0.00 0.00 40.56 3.24
364 365 2.227865 GAGACAGTGAGTGTGGAGAGTC 59.772 54.545 0.00 0.00 40.56 3.36
365 366 1.957177 GACAGTGAGTGTGGAGAGTCA 59.043 52.381 0.00 0.00 40.56 3.41
366 367 1.683917 ACAGTGAGTGTGGAGAGTCAC 59.316 52.381 0.00 4.03 43.83 3.67
367 368 0.955178 AGTGAGTGTGGAGAGTCACG 59.045 55.000 6.21 0.00 46.71 4.35
368 369 0.952280 GTGAGTGTGGAGAGTCACGA 59.048 55.000 0.00 0.00 40.31 4.35
369 370 0.952280 TGAGTGTGGAGAGTCACGAC 59.048 55.000 0.00 0.00 40.31 4.34
370 371 0.952280 GAGTGTGGAGAGTCACGACA 59.048 55.000 1.41 1.41 40.31 4.35
371 372 1.337071 GAGTGTGGAGAGTCACGACAA 59.663 52.381 6.96 0.00 40.31 3.18
372 373 1.338337 AGTGTGGAGAGTCACGACAAG 59.662 52.381 6.96 0.00 40.31 3.16
373 374 1.067212 GTGTGGAGAGTCACGACAAGT 59.933 52.381 6.96 0.00 40.31 3.16
382 383 2.728180 ACGACAAGTGAGCGCAGA 59.272 55.556 11.47 0.00 0.00 4.26
383 384 1.661821 ACGACAAGTGAGCGCAGAC 60.662 57.895 11.47 5.26 0.00 3.51
384 385 1.372251 CGACAAGTGAGCGCAGACT 60.372 57.895 11.47 8.00 0.00 3.24
385 386 1.612469 CGACAAGTGAGCGCAGACTG 61.612 60.000 11.47 8.22 0.00 3.51
386 387 1.895280 GACAAGTGAGCGCAGACTGC 61.895 60.000 17.84 17.84 40.69 4.40
396 397 4.020617 CAGACTGCGGAGGGGCAA 62.021 66.667 9.36 0.00 43.39 4.52
397 398 3.249189 AGACTGCGGAGGGGCAAA 61.249 61.111 9.36 0.00 43.39 3.68
398 399 2.282180 GACTGCGGAGGGGCAAAA 60.282 61.111 9.36 0.00 43.39 2.44
399 400 1.678970 GACTGCGGAGGGGCAAAAT 60.679 57.895 9.36 0.00 43.39 1.82
400 401 1.937546 GACTGCGGAGGGGCAAAATG 61.938 60.000 9.36 0.00 43.39 2.32
401 402 2.679642 TGCGGAGGGGCAAAATGG 60.680 61.111 0.00 0.00 40.59 3.16
402 403 3.460868 GCGGAGGGGCAAAATGGG 61.461 66.667 0.00 0.00 0.00 4.00
403 404 2.358619 CGGAGGGGCAAAATGGGA 59.641 61.111 0.00 0.00 0.00 4.37
404 405 1.304879 CGGAGGGGCAAAATGGGAA 60.305 57.895 0.00 0.00 0.00 3.97
405 406 0.902516 CGGAGGGGCAAAATGGGAAA 60.903 55.000 0.00 0.00 0.00 3.13
406 407 0.613260 GGAGGGGCAAAATGGGAAAC 59.387 55.000 0.00 0.00 0.00 2.78
407 408 1.347062 GAGGGGCAAAATGGGAAACA 58.653 50.000 0.00 0.00 0.00 2.83
408 409 1.696884 GAGGGGCAAAATGGGAAACAA 59.303 47.619 0.00 0.00 0.00 2.83
409 410 1.419762 AGGGGCAAAATGGGAAACAAC 59.580 47.619 0.00 0.00 0.00 3.32
410 411 1.141858 GGGGCAAAATGGGAAACAACA 59.858 47.619 0.00 0.00 0.00 3.33
411 412 2.422093 GGGGCAAAATGGGAAACAACAA 60.422 45.455 0.00 0.00 0.00 2.83
412 413 2.616376 GGGCAAAATGGGAAACAACAAC 59.384 45.455 0.00 0.00 0.00 3.32
413 414 3.274288 GGCAAAATGGGAAACAACAACA 58.726 40.909 0.00 0.00 0.00 3.33
414 415 3.882288 GGCAAAATGGGAAACAACAACAT 59.118 39.130 0.00 0.00 0.00 2.71
415 416 4.337836 GGCAAAATGGGAAACAACAACATT 59.662 37.500 0.00 0.00 33.55 2.71
416 417 5.163571 GGCAAAATGGGAAACAACAACATTT 60.164 36.000 0.00 0.00 41.84 2.32
417 418 6.328714 GCAAAATGGGAAACAACAACATTTT 58.671 32.000 0.00 0.00 46.60 1.82
418 419 6.471841 GCAAAATGGGAAACAACAACATTTTC 59.528 34.615 9.83 3.96 44.95 2.29
419 420 5.982465 AATGGGAAACAACAACATTTTCG 57.018 34.783 0.00 0.00 31.21 3.46
420 421 4.457834 TGGGAAACAACAACATTTTCGT 57.542 36.364 0.00 0.00 31.21 3.85
421 422 5.578005 TGGGAAACAACAACATTTTCGTA 57.422 34.783 0.00 0.00 31.21 3.43
422 423 5.583495 TGGGAAACAACAACATTTTCGTAG 58.417 37.500 0.00 0.00 31.21 3.51
423 424 4.443063 GGGAAACAACAACATTTTCGTAGC 59.557 41.667 0.00 0.00 31.21 3.58
424 425 4.145756 GGAAACAACAACATTTTCGTAGCG 59.854 41.667 0.00 0.00 31.21 4.26
425 426 3.955771 ACAACAACATTTTCGTAGCGT 57.044 38.095 0.00 0.00 0.00 5.07
426 427 4.281525 ACAACAACATTTTCGTAGCGTT 57.718 36.364 0.00 0.00 0.00 4.84
427 428 5.406767 ACAACAACATTTTCGTAGCGTTA 57.593 34.783 0.00 0.00 0.00 3.18
428 429 5.199726 ACAACAACATTTTCGTAGCGTTAC 58.800 37.500 0.00 0.00 0.00 2.50
443 444 5.910637 AGCGTTACGAAATTTCAACTACA 57.089 34.783 17.99 0.00 0.00 2.74
444 445 6.289745 AGCGTTACGAAATTTCAACTACAA 57.710 33.333 17.99 0.11 0.00 2.41
445 446 6.894828 AGCGTTACGAAATTTCAACTACAAT 58.105 32.000 17.99 0.00 0.00 2.71
446 447 7.357303 AGCGTTACGAAATTTCAACTACAATT 58.643 30.769 17.99 0.00 0.00 2.32
447 448 7.858879 AGCGTTACGAAATTTCAACTACAATTT 59.141 29.630 17.99 0.00 35.69 1.82
448 449 8.145312 GCGTTACGAAATTTCAACTACAATTTC 58.855 33.333 17.99 7.13 42.36 2.17
449 450 9.377383 CGTTACGAAATTTCAACTACAATTTCT 57.623 29.630 17.99 5.68 43.09 2.52
455 456 9.989394 GAAATTTCAACTACAATTTCTAAACGC 57.011 29.630 13.40 0.00 42.44 4.84
456 457 9.744468 AAATTTCAACTACAATTTCTAAACGCT 57.256 25.926 0.00 0.00 28.34 5.07
457 458 8.950403 ATTTCAACTACAATTTCTAAACGCTC 57.050 30.769 0.00 0.00 0.00 5.03
458 459 7.724305 TTCAACTACAATTTCTAAACGCTCT 57.276 32.000 0.00 0.00 0.00 4.09
459 460 7.724305 TCAACTACAATTTCTAAACGCTCTT 57.276 32.000 0.00 0.00 0.00 2.85
460 461 8.821147 TCAACTACAATTTCTAAACGCTCTTA 57.179 30.769 0.00 0.00 0.00 2.10
461 462 9.431887 TCAACTACAATTTCTAAACGCTCTTAT 57.568 29.630 0.00 0.00 0.00 1.73
476 477 7.829378 ACGCTCTTATAAAAGTTTACAGAGG 57.171 36.000 16.49 11.85 35.69 3.69
477 478 6.817140 ACGCTCTTATAAAAGTTTACAGAGGG 59.183 38.462 22.31 22.31 43.34 4.30
478 479 7.039882 CGCTCTTATAAAAGTTTACAGAGGGA 58.960 38.462 20.93 3.69 42.11 4.20
479 480 7.222999 CGCTCTTATAAAAGTTTACAGAGGGAG 59.777 40.741 20.93 10.43 42.11 4.30
480 481 8.041919 GCTCTTATAAAAGTTTACAGAGGGAGT 58.958 37.037 16.49 0.00 35.69 3.85
496 497 8.670490 ACAGAGGGAGTAGTATATATGAAGTCA 58.330 37.037 0.00 0.00 0.00 3.41
499 500 8.871629 AGGGAGTAGTATATATGAAGTCACAG 57.128 38.462 0.00 0.00 0.00 3.66
547 548 8.282592 TCGAATTATGAAACAAGTCAAGAACAG 58.717 33.333 0.00 0.00 0.00 3.16
595 596 1.203050 ACCACACCAAATCTTCCCAGG 60.203 52.381 0.00 0.00 0.00 4.45
751 755 9.950680 TGAATCAAGTCAAAGACAATAAGAAAC 57.049 29.630 0.00 0.00 34.60 2.78
772 776 7.607991 AGAAACTATCACTTGGTTGACCATAAG 59.392 37.037 3.28 2.13 46.97 1.73
801 805 5.589050 CCAAATCTTGCTGAGATCAGATCAA 59.411 40.000 13.98 8.09 44.41 2.57
802 806 6.238511 CCAAATCTTGCTGAGATCAGATCAAG 60.239 42.308 13.98 16.05 44.41 3.02
803 807 3.794717 TCTTGCTGAGATCAGATCAAGC 58.205 45.455 22.60 22.60 46.59 4.01
804 808 3.197116 TCTTGCTGAGATCAGATCAAGCA 59.803 43.478 25.92 25.92 46.59 3.91
807 811 4.524053 TGCTGAGATCAGATCAAGCAAAT 58.476 39.130 26.85 2.74 46.59 2.32
809 813 5.526479 TGCTGAGATCAGATCAAGCAAATAC 59.474 40.000 26.85 8.06 46.59 1.89
811 815 6.927936 GCTGAGATCAGATCAAGCAAATACTA 59.072 38.462 23.69 0.00 46.59 1.82
815 819 9.405587 GAGATCAGATCAAGCAAATACTAGTAC 57.594 37.037 13.14 0.00 0.00 2.73
833 837 7.206687 ACTAGTACAGTACCGTCTACACTATC 58.793 42.308 7.13 0.00 34.98 2.08
842 846 8.213679 AGTACCGTCTACACTATCTGGTTATAA 58.786 37.037 0.00 0.00 0.00 0.98
871 875 2.583024 TGCAATCACTCCCATCACAA 57.417 45.000 0.00 0.00 0.00 3.33
875 879 4.202441 GCAATCACTCCCATCACAAGTAT 58.798 43.478 0.00 0.00 0.00 2.12
876 880 5.104569 TGCAATCACTCCCATCACAAGTATA 60.105 40.000 0.00 0.00 0.00 1.47
994 1015 1.536418 TGGGTGTGTGAGAGGGAGG 60.536 63.158 0.00 0.00 0.00 4.30
1246 1330 0.035152 ATGGTTCAATCTCGCAGCCA 60.035 50.000 0.00 0.00 0.00 4.75
1280 1364 2.995574 CGTTGGAGGACGGGGAGT 60.996 66.667 0.00 0.00 39.27 3.85
1310 1395 4.693566 TCTTCGGTATGAAATTCACACACC 59.306 41.667 6.73 9.37 35.79 4.16
1316 1402 5.184864 GGTATGAAATTCACACACCCATCAA 59.815 40.000 6.73 0.00 0.00 2.57
1598 1732 4.477975 GACCAGGCCGTCGTCGAG 62.478 72.222 2.98 0.00 39.71 4.04
1616 1750 1.031029 AGGAGTACGTCGGGAAGCTC 61.031 60.000 0.00 0.00 0.00 4.09
1817 1951 1.374947 CAGGCCCTCGGTGAAGAAA 59.625 57.895 0.00 0.00 0.00 2.52
1823 1957 0.955919 CCTCGGTGAAGAAAGTGGCC 60.956 60.000 0.00 0.00 0.00 5.36
1829 1963 2.034221 AAGAAAGTGGCCCCGCTC 59.966 61.111 0.00 0.00 35.51 5.03
1853 1987 2.548920 CCACCTCGGATTGAAGCTATCC 60.549 54.545 4.15 4.15 38.55 2.59
1873 2007 5.801350 TCCTCGTCTGCTTAAATTGAATG 57.199 39.130 0.00 0.00 0.00 2.67
1877 2011 3.780801 CGTCTGCTTAAATTGAATGTCGC 59.219 43.478 0.00 0.00 0.00 5.19
1921 2055 7.968405 GCATTTCAGTTGGGTTTTACTACTATG 59.032 37.037 0.00 0.00 0.00 2.23
1965 2099 8.967218 ACATGTTGAGAAATAAATGTTTGTTCG 58.033 29.630 0.00 0.00 0.00 3.95
2020 2186 6.650427 ATAAGCGTATGGATCACTTAGTGA 57.350 37.500 17.87 17.87 46.90 3.41
2032 2198 4.659088 TCACTTAGTGATCTAAACGCTCG 58.341 43.478 11.42 0.00 37.67 5.03
2049 2215 5.172934 ACGCTCGTATATTTCTTTGTGGAA 58.827 37.500 0.00 0.00 0.00 3.53
2110 2276 5.664457 AGATGCACTAAACTCATCATCGAA 58.336 37.500 0.00 0.00 39.12 3.71
2116 2282 6.423302 GCACTAAACTCATCATCGAATCTGAT 59.577 38.462 0.00 0.00 33.65 2.90
2129 2295 2.105006 ATCTGATGGTATGATGGCGC 57.895 50.000 0.00 0.00 0.00 6.53
2139 2305 2.280457 GATGGCGCTGGAGGCTAC 60.280 66.667 7.64 0.00 39.13 3.58
2142 2308 2.838225 GGCGCTGGAGGCTACCTA 60.838 66.667 7.64 0.00 39.13 3.08
2176 2343 6.257849 TGCTTATATTCGGACTGATGTTTCAC 59.742 38.462 0.00 0.00 0.00 3.18
2187 2354 6.428159 GGACTGATGTTTCACTCATTACAAGT 59.572 38.462 0.00 0.00 0.00 3.16
2199 2366 6.205464 CACTCATTACAAGTCATGGAGTTTGT 59.795 38.462 0.00 1.96 0.00 2.83
2200 2367 6.772716 ACTCATTACAAGTCATGGAGTTTGTT 59.227 34.615 9.24 0.00 0.00 2.83
2201 2368 7.285401 ACTCATTACAAGTCATGGAGTTTGTTT 59.715 33.333 9.24 0.00 0.00 2.83
2202 2369 8.006298 TCATTACAAGTCATGGAGTTTGTTTT 57.994 30.769 9.24 0.00 0.00 2.43
2203 2370 8.134895 TCATTACAAGTCATGGAGTTTGTTTTC 58.865 33.333 9.24 0.00 0.00 2.29
2204 2371 5.913137 ACAAGTCATGGAGTTTGTTTTCA 57.087 34.783 0.00 0.00 0.00 2.69
2205 2372 6.279513 ACAAGTCATGGAGTTTGTTTTCAA 57.720 33.333 0.00 0.00 38.10 2.69
2206 2373 6.696411 ACAAGTCATGGAGTTTGTTTTCAAA 58.304 32.000 0.00 0.00 45.96 2.69
2232 2399 4.773323 AAAAGTCATGGAGTTTGCTAGC 57.227 40.909 8.10 8.10 35.66 3.42
2249 2416 3.131223 GCTAGCATCAGTCTTGTCCACTA 59.869 47.826 10.63 0.00 0.00 2.74
2250 2417 4.202202 GCTAGCATCAGTCTTGTCCACTAT 60.202 45.833 10.63 0.00 0.00 2.12
2256 2423 3.701542 TCAGTCTTGTCCACTATAGCAGG 59.298 47.826 0.00 2.44 0.00 4.85
2268 2435 5.413833 CCACTATAGCAGGGAAGCAAATATG 59.586 44.000 0.00 0.00 36.85 1.78
2270 2437 2.834638 AGCAGGGAAGCAAATATGGT 57.165 45.000 0.00 0.00 39.43 3.55
2271 2438 3.951563 AGCAGGGAAGCAAATATGGTA 57.048 42.857 0.00 0.00 35.91 3.25
2273 2440 3.203040 AGCAGGGAAGCAAATATGGTAGT 59.797 43.478 0.00 0.00 35.91 2.73
2274 2441 3.954258 GCAGGGAAGCAAATATGGTAGTT 59.046 43.478 0.00 0.00 35.91 2.24
2275 2442 4.202050 GCAGGGAAGCAAATATGGTAGTTG 60.202 45.833 0.00 0.00 35.91 3.16
2277 2444 5.829924 CAGGGAAGCAAATATGGTAGTTGAT 59.170 40.000 1.80 0.00 35.93 2.57
2278 2445 6.322201 CAGGGAAGCAAATATGGTAGTTGATT 59.678 38.462 1.05 1.05 43.71 2.57
2279 2446 6.897413 AGGGAAGCAAATATGGTAGTTGATTT 59.103 34.615 2.84 0.00 41.56 2.17
2280 2447 6.980397 GGGAAGCAAATATGGTAGTTGATTTG 59.020 38.462 2.84 0.00 41.56 2.32
2300 3673 4.193826 TGCTTGGCAAAACACTGTTTTA 57.806 36.364 17.56 2.50 34.76 1.52
2308 3681 6.256757 TGGCAAAACACTGTTTTAGCATTAAC 59.743 34.615 25.92 16.69 0.00 2.01
2309 3682 6.344032 GCAAAACACTGTTTTAGCATTAACG 58.656 36.000 22.99 11.24 0.00 3.18
2313 3686 6.224420 ACACTGTTTTAGCATTAACGAGTC 57.776 37.500 0.00 0.00 0.00 3.36
2323 3696 5.724328 AGCATTAACGAGTCTGAATCTTGA 58.276 37.500 3.47 0.00 0.00 3.02
2329 3702 6.487689 AACGAGTCTGAATCTTGAAAATCC 57.512 37.500 3.47 0.00 0.00 3.01
2332 3705 6.073003 ACGAGTCTGAATCTTGAAAATCCAAC 60.073 38.462 3.47 0.00 0.00 3.77
2339 3723 6.497954 TGAATCTTGAAAATCCAACATCCCTT 59.502 34.615 0.00 0.00 0.00 3.95
2344 3728 5.331906 TGAAAATCCAACATCCCTTCATCA 58.668 37.500 0.00 0.00 0.00 3.07
2354 3738 7.201732 CCAACATCCCTTCATCAGTATGTAAAC 60.202 40.741 0.00 0.00 37.40 2.01
2360 3744 6.183360 CCCTTCATCAGTATGTAAACGACCTA 60.183 42.308 0.00 0.00 37.40 3.08
2361 3745 7.262772 CCTTCATCAGTATGTAAACGACCTAA 58.737 38.462 0.00 0.00 37.40 2.69
2377 3761 9.847224 AAACGACCTAACTATTATTTGATGGAT 57.153 29.630 0.00 0.00 0.00 3.41
2435 3819 1.676006 AGGAAAAGAGGTTGTGCGTTG 59.324 47.619 0.00 0.00 0.00 4.10
2436 3820 1.477105 GAAAAGAGGTTGTGCGTTGC 58.523 50.000 0.00 0.00 0.00 4.17
2455 3839 6.576551 GTTGCAACGGAAGAATTAAAAACA 57.423 33.333 14.90 0.00 0.00 2.83
2456 3840 6.407623 GTTGCAACGGAAGAATTAAAAACAC 58.592 36.000 14.90 0.00 0.00 3.32
2458 3842 6.276847 TGCAACGGAAGAATTAAAAACACAT 58.723 32.000 0.00 0.00 0.00 3.21
2459 3843 6.419413 TGCAACGGAAGAATTAAAAACACATC 59.581 34.615 0.00 0.00 0.00 3.06
2483 3870 2.807676 ACCATGATTCAAGACCCCAAC 58.192 47.619 0.00 0.00 0.00 3.77
2485 3872 3.245730 ACCATGATTCAAGACCCCAACAT 60.246 43.478 0.00 0.00 0.00 2.71
2486 3873 3.131577 CCATGATTCAAGACCCCAACATG 59.868 47.826 0.00 0.00 35.26 3.21
2494 3881 2.863809 AGACCCCAACATGTCAACTTC 58.136 47.619 0.00 0.00 33.89 3.01
2496 3883 1.499007 ACCCCAACATGTCAACTTCCT 59.501 47.619 0.00 0.00 0.00 3.36
2524 3911 2.373540 ACATGACATGCCATTTGTGC 57.626 45.000 15.49 0.00 0.00 4.57
2529 3916 1.293818 CATGCCATTTGTGCTGCCA 59.706 52.632 0.00 0.00 0.00 4.92
2548 3935 3.621558 CCACTTATCCTTCTTTCCACCC 58.378 50.000 0.00 0.00 0.00 4.61
2552 3939 0.253327 ATCCTTCTTTCCACCCTCGC 59.747 55.000 0.00 0.00 0.00 5.03
2572 3959 1.675641 GACGGTGGCCTCAATGCTT 60.676 57.895 3.32 0.00 0.00 3.91
2578 3965 1.885887 GTGGCCTCAATGCTTACACAA 59.114 47.619 3.32 0.00 0.00 3.33
2605 3992 9.283768 TCATAATGTGTTTGAATGTAGTCAACT 57.716 29.630 0.00 0.00 37.24 3.16
2611 3998 7.441157 TGTGTTTGAATGTAGTCAACTCTAAGG 59.559 37.037 0.00 0.00 37.24 2.69
2619 4006 5.717178 TGTAGTCAACTCTAAGGCATCTCTT 59.283 40.000 0.00 0.00 0.00 2.85
2639 4028 7.353525 TCTCTTGGCATAAAATGGGAAATCTA 58.646 34.615 0.00 0.00 0.00 1.98
2656 4045 3.232720 TCTACTTTGTTTTCCACCCCC 57.767 47.619 0.00 0.00 0.00 5.40
2657 4046 1.883926 CTACTTTGTTTTCCACCCCCG 59.116 52.381 0.00 0.00 0.00 5.73
2658 4047 1.365999 CTTTGTTTTCCACCCCCGC 59.634 57.895 0.00 0.00 0.00 6.13
2659 4048 2.414840 CTTTGTTTTCCACCCCCGCG 62.415 60.000 0.00 0.00 0.00 6.46
2660 4049 2.905935 TTTGTTTTCCACCCCCGCGA 62.906 55.000 8.23 0.00 0.00 5.87
2661 4050 2.595172 GTTTTCCACCCCCGCGAA 60.595 61.111 8.23 0.00 0.00 4.70
2662 4051 2.281900 TTTTCCACCCCCGCGAAG 60.282 61.111 8.23 0.00 0.00 3.79
2666 4055 2.596338 CCACCCCCGCGAAGTTTT 60.596 61.111 8.23 0.00 0.00 2.43
2667 4056 2.642700 CACCCCCGCGAAGTTTTG 59.357 61.111 8.23 0.00 0.00 2.44
2668 4057 3.292159 ACCCCCGCGAAGTTTTGC 61.292 61.111 8.23 0.00 0.00 3.68
2669 4058 4.050934 CCCCCGCGAAGTTTTGCC 62.051 66.667 8.23 0.00 33.96 4.52
2709 4098 5.278022 GGCCATAGATGATTTCTTTCGTTCC 60.278 44.000 0.00 0.00 35.79 3.62
2714 4103 6.442513 AGATGATTTCTTTCGTTCCAATCC 57.557 37.500 0.00 0.00 0.00 3.01
2717 4106 5.016173 TGATTTCTTTCGTTCCAATCCCAT 58.984 37.500 0.00 0.00 0.00 4.00
2726 4115 3.435026 CGTTCCAATCCCATTAGGTCCAT 60.435 47.826 0.00 0.00 36.75 3.41
2729 4118 3.138283 TCCAATCCCATTAGGTCCATGTC 59.862 47.826 0.00 0.00 36.75 3.06
2738 4127 8.383175 TCCCATTAGGTCCATGTCTTTTATATC 58.617 37.037 0.00 0.00 36.75 1.63
2746 4135 9.071276 GGTCCATGTCTTTTATATCAACATGAT 57.929 33.333 13.71 0.00 46.36 2.45
2747 4136 9.888878 GTCCATGTCTTTTATATCAACATGATG 57.111 33.333 13.71 0.00 46.36 3.07
2755 4144 9.293404 CTTTTATATCAACATGATGTCCCATCT 57.707 33.333 0.00 0.00 37.70 2.90
2756 4145 9.645128 TTTTATATCAACATGATGTCCCATCTT 57.355 29.630 0.00 0.00 37.70 2.40
2757 4146 9.645128 TTTATATCAACATGATGTCCCATCTTT 57.355 29.630 0.00 0.00 37.70 2.52
2758 4147 5.847111 ATCAACATGATGTCCCATCTTTG 57.153 39.130 0.00 6.13 35.43 2.77
2759 4148 4.665451 TCAACATGATGTCCCATCTTTGT 58.335 39.130 0.00 6.65 0.00 2.83
2760 4149 5.078949 TCAACATGATGTCCCATCTTTGTT 58.921 37.500 0.00 14.64 0.00 2.83
2761 4150 5.047872 TCAACATGATGTCCCATCTTTGTTG 60.048 40.000 26.41 26.41 40.27 3.33
2762 4151 3.194116 ACATGATGTCCCATCTTTGTTGC 59.806 43.478 0.00 0.00 0.00 4.17
2763 4152 2.170166 TGATGTCCCATCTTTGTTGCC 58.830 47.619 5.87 0.00 0.00 4.52
2764 4153 2.170166 GATGTCCCATCTTTGTTGCCA 58.830 47.619 0.00 0.00 0.00 4.92
2765 4154 1.327303 TGTCCCATCTTTGTTGCCAC 58.673 50.000 0.00 0.00 0.00 5.01
2766 4155 1.133513 TGTCCCATCTTTGTTGCCACT 60.134 47.619 0.00 0.00 0.00 4.00
2767 4156 1.963515 GTCCCATCTTTGTTGCCACTT 59.036 47.619 0.00 0.00 0.00 3.16
2768 4157 3.153919 GTCCCATCTTTGTTGCCACTTA 58.846 45.455 0.00 0.00 0.00 2.24
2769 4158 3.763897 GTCCCATCTTTGTTGCCACTTAT 59.236 43.478 0.00 0.00 0.00 1.73
2770 4159 4.220602 GTCCCATCTTTGTTGCCACTTATT 59.779 41.667 0.00 0.00 0.00 1.40
2771 4160 4.837860 TCCCATCTTTGTTGCCACTTATTT 59.162 37.500 0.00 0.00 0.00 1.40
2772 4161 5.306678 TCCCATCTTTGTTGCCACTTATTTT 59.693 36.000 0.00 0.00 0.00 1.82
2773 4162 5.639082 CCCATCTTTGTTGCCACTTATTTTC 59.361 40.000 0.00 0.00 0.00 2.29
2780 4169 4.234574 GTTGCCACTTATTTTCCTTTCCG 58.765 43.478 0.00 0.00 0.00 4.30
2786 4175 3.245122 ACTTATTTTCCTTTCCGCCCTCA 60.245 43.478 0.00 0.00 0.00 3.86
2830 4219 2.357637 ACAGTCCCAACGTGTTTGAATG 59.642 45.455 0.00 7.51 37.39 2.67
2838 4227 1.202359 ACGTGTTTGAATGTGGGCAAC 60.202 47.619 0.00 0.00 0.00 4.17
2859 4248 4.285863 ACCCTAAGATTGGTCTCTCTCTG 58.714 47.826 0.00 0.00 32.15 3.35
2861 4250 5.044030 ACCCTAAGATTGGTCTCTCTCTGTA 60.044 44.000 0.00 0.00 32.15 2.74
2863 4252 6.015519 CCCTAAGATTGGTCTCTCTCTGTATG 60.016 46.154 0.00 0.00 32.15 2.39
2864 4253 6.549364 CCTAAGATTGGTCTCTCTCTGTATGT 59.451 42.308 0.00 0.00 32.15 2.29
2865 4254 5.850557 AGATTGGTCTCTCTCTGTATGTG 57.149 43.478 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.017559 ATGAAGTAGGAGGCCGTCGC 62.018 60.000 0.00 0.00 0.00 5.19
5 6 1.001597 GTATGAAGTAGGAGGCCGTCG 60.002 57.143 0.00 0.00 0.00 5.12
6 7 2.293955 GAGTATGAAGTAGGAGGCCGTC 59.706 54.545 0.00 0.00 0.00 4.79
7 8 2.308690 GAGTATGAAGTAGGAGGCCGT 58.691 52.381 0.00 0.00 0.00 5.68
8 9 1.614413 GGAGTATGAAGTAGGAGGCCG 59.386 57.143 0.00 0.00 0.00 6.13
9 10 1.972075 GGGAGTATGAAGTAGGAGGCC 59.028 57.143 0.00 0.00 0.00 5.19
10 11 1.614413 CGGGAGTATGAAGTAGGAGGC 59.386 57.143 0.00 0.00 0.00 4.70
11 12 1.614413 GCGGGAGTATGAAGTAGGAGG 59.386 57.143 0.00 0.00 0.00 4.30
12 13 2.294791 CAGCGGGAGTATGAAGTAGGAG 59.705 54.545 0.00 0.00 0.00 3.69
13 14 2.092049 TCAGCGGGAGTATGAAGTAGGA 60.092 50.000 0.00 0.00 0.00 2.94
14 15 2.294791 CTCAGCGGGAGTATGAAGTAGG 59.705 54.545 0.77 0.00 38.90 3.18
15 16 3.634568 CTCAGCGGGAGTATGAAGTAG 57.365 52.381 0.77 0.00 38.90 2.57
26 27 2.829720 AGTTGTTGTATACTCAGCGGGA 59.170 45.455 4.17 0.00 0.00 5.14
27 28 3.247006 AGTTGTTGTATACTCAGCGGG 57.753 47.619 4.17 0.00 0.00 6.13
28 29 4.242475 TGAAGTTGTTGTATACTCAGCGG 58.758 43.478 4.17 0.00 0.00 5.52
29 30 5.161358 TCTGAAGTTGTTGTATACTCAGCG 58.839 41.667 4.17 0.00 0.00 5.18
30 31 6.256757 GGATCTGAAGTTGTTGTATACTCAGC 59.743 42.308 4.17 6.01 0.00 4.26
31 32 7.323420 TGGATCTGAAGTTGTTGTATACTCAG 58.677 38.462 4.17 7.01 0.00 3.35
32 33 7.239763 TGGATCTGAAGTTGTTGTATACTCA 57.760 36.000 4.17 1.12 0.00 3.41
33 34 6.256757 GCTGGATCTGAAGTTGTTGTATACTC 59.743 42.308 4.17 0.00 0.00 2.59
34 35 6.109359 GCTGGATCTGAAGTTGTTGTATACT 58.891 40.000 4.17 0.00 0.00 2.12
35 36 5.294552 GGCTGGATCTGAAGTTGTTGTATAC 59.705 44.000 0.00 0.00 0.00 1.47
36 37 5.045942 TGGCTGGATCTGAAGTTGTTGTATA 60.046 40.000 0.00 0.00 0.00 1.47
37 38 4.263462 TGGCTGGATCTGAAGTTGTTGTAT 60.263 41.667 0.00 0.00 0.00 2.29
38 39 3.072330 TGGCTGGATCTGAAGTTGTTGTA 59.928 43.478 0.00 0.00 0.00 2.41
39 40 2.158623 TGGCTGGATCTGAAGTTGTTGT 60.159 45.455 0.00 0.00 0.00 3.32
40 41 2.486982 CTGGCTGGATCTGAAGTTGTTG 59.513 50.000 0.00 0.00 0.00 3.33
41 42 2.787994 CTGGCTGGATCTGAAGTTGTT 58.212 47.619 0.00 0.00 0.00 2.83
42 43 1.612726 GCTGGCTGGATCTGAAGTTGT 60.613 52.381 0.00 0.00 0.00 3.32
43 44 1.093159 GCTGGCTGGATCTGAAGTTG 58.907 55.000 0.00 0.00 0.00 3.16
44 45 0.694771 TGCTGGCTGGATCTGAAGTT 59.305 50.000 0.00 0.00 0.00 2.66
45 46 0.252479 CTGCTGGCTGGATCTGAAGT 59.748 55.000 0.00 0.00 0.00 3.01
46 47 1.096386 GCTGCTGGCTGGATCTGAAG 61.096 60.000 0.00 0.00 38.06 3.02
47 48 1.077930 GCTGCTGGCTGGATCTGAA 60.078 57.895 0.00 0.00 38.06 3.02
48 49 1.632965 ATGCTGCTGGCTGGATCTGA 61.633 55.000 0.00 0.00 42.39 3.27
49 50 0.108019 TATGCTGCTGGCTGGATCTG 59.892 55.000 9.34 0.00 42.39 2.90
50 51 0.397187 CTATGCTGCTGGCTGGATCT 59.603 55.000 9.34 0.00 42.39 2.75
51 52 1.235948 GCTATGCTGCTGGCTGGATC 61.236 60.000 9.34 0.00 42.39 3.36
52 53 1.228184 GCTATGCTGCTGGCTGGAT 60.228 57.895 10.61 10.61 42.39 3.41
53 54 2.191375 GCTATGCTGCTGGCTGGA 59.809 61.111 0.00 0.00 42.39 3.86
54 55 1.892862 GAGCTATGCTGCTGGCTGG 60.893 63.158 16.14 0.00 44.17 4.85
55 56 1.892862 GGAGCTATGCTGCTGGCTG 60.893 63.158 16.14 0.00 43.58 4.85
56 57 2.509916 GGAGCTATGCTGCTGGCT 59.490 61.111 12.50 12.50 43.58 4.75
62 63 2.030262 GCGGGAGGAGCTATGCTG 59.970 66.667 0.00 0.00 39.88 4.41
63 64 2.123077 AGCGGGAGGAGCTATGCT 60.123 61.111 0.00 0.00 44.05 3.79
64 65 2.030262 CAGCGGGAGGAGCTATGC 59.970 66.667 0.00 0.00 44.06 3.14
65 66 2.093537 GACCAGCGGGAGGAGCTATG 62.094 65.000 10.86 0.00 44.06 2.23
66 67 1.834822 GACCAGCGGGAGGAGCTAT 60.835 63.158 10.86 0.00 44.06 2.97
67 68 2.442272 GACCAGCGGGAGGAGCTA 60.442 66.667 10.86 0.00 44.06 3.32
70 71 3.151022 GAGGACCAGCGGGAGGAG 61.151 72.222 10.86 0.00 38.05 3.69
125 126 4.022329 CGATGGAGTTAAAGGTGCCTTTTT 60.022 41.667 19.77 7.86 42.93 1.94
126 127 3.506067 CGATGGAGTTAAAGGTGCCTTTT 59.494 43.478 19.77 4.03 42.93 2.27
127 128 3.081804 CGATGGAGTTAAAGGTGCCTTT 58.918 45.455 18.75 18.75 46.56 3.11
128 129 2.304761 TCGATGGAGTTAAAGGTGCCTT 59.695 45.455 0.00 0.00 37.98 4.35
129 130 1.906574 TCGATGGAGTTAAAGGTGCCT 59.093 47.619 0.00 0.00 0.00 4.75
130 131 2.093658 TCTCGATGGAGTTAAAGGTGCC 60.094 50.000 4.53 0.00 41.26 5.01
131 132 3.190874 CTCTCGATGGAGTTAAAGGTGC 58.809 50.000 4.53 0.00 41.26 5.01
132 133 3.195825 ACCTCTCGATGGAGTTAAAGGTG 59.804 47.826 13.06 0.00 41.26 4.00
133 134 3.195825 CACCTCTCGATGGAGTTAAAGGT 59.804 47.826 9.28 9.28 41.26 3.50
134 135 3.447586 TCACCTCTCGATGGAGTTAAAGG 59.552 47.826 11.00 6.64 41.26 3.11
135 136 4.425520 GTCACCTCTCGATGGAGTTAAAG 58.574 47.826 11.00 0.00 41.26 1.85
136 137 3.119602 CGTCACCTCTCGATGGAGTTAAA 60.120 47.826 11.00 0.00 41.26 1.52
137 138 2.422479 CGTCACCTCTCGATGGAGTTAA 59.578 50.000 11.00 0.00 41.26 2.01
138 139 2.014857 CGTCACCTCTCGATGGAGTTA 58.985 52.381 11.00 0.00 41.26 2.24
139 140 0.811915 CGTCACCTCTCGATGGAGTT 59.188 55.000 11.00 0.00 41.26 3.01
140 141 1.658686 GCGTCACCTCTCGATGGAGT 61.659 60.000 11.00 0.00 41.26 3.85
141 142 1.064946 GCGTCACCTCTCGATGGAG 59.935 63.158 11.00 0.00 41.89 3.86
142 143 2.761195 CGCGTCACCTCTCGATGGA 61.761 63.158 11.00 0.00 0.00 3.41
143 144 2.278206 CGCGTCACCTCTCGATGG 60.278 66.667 0.00 3.40 0.00 3.51
144 145 2.278206 CCGCGTCACCTCTCGATG 60.278 66.667 4.92 0.00 0.00 3.84
145 146 3.518998 CCCGCGTCACCTCTCGAT 61.519 66.667 4.92 0.00 0.00 3.59
158 159 4.214327 CTCTTCCTCTCGCCCCGC 62.214 72.222 0.00 0.00 0.00 6.13
159 160 3.532155 CCTCTTCCTCTCGCCCCG 61.532 72.222 0.00 0.00 0.00 5.73
160 161 3.855853 GCCTCTTCCTCTCGCCCC 61.856 72.222 0.00 0.00 0.00 5.80
161 162 4.214327 CGCCTCTTCCTCTCGCCC 62.214 72.222 0.00 0.00 0.00 6.13
162 163 3.141488 TCGCCTCTTCCTCTCGCC 61.141 66.667 0.00 0.00 0.00 5.54
163 164 2.103340 GTCGCCTCTTCCTCTCGC 59.897 66.667 0.00 0.00 0.00 5.03
164 165 2.042520 CTCGTCGCCTCTTCCTCTCG 62.043 65.000 0.00 0.00 0.00 4.04
165 166 1.720694 CCTCGTCGCCTCTTCCTCTC 61.721 65.000 0.00 0.00 0.00 3.20
166 167 1.751162 CCTCGTCGCCTCTTCCTCT 60.751 63.158 0.00 0.00 0.00 3.69
167 168 2.776913 CCCTCGTCGCCTCTTCCTC 61.777 68.421 0.00 0.00 0.00 3.71
168 169 2.756283 CCCTCGTCGCCTCTTCCT 60.756 66.667 0.00 0.00 0.00 3.36
169 170 4.516195 GCCCTCGTCGCCTCTTCC 62.516 72.222 0.00 0.00 0.00 3.46
170 171 2.119655 TAGCCCTCGTCGCCTCTTC 61.120 63.158 0.00 0.00 0.00 2.87
171 172 2.044252 TAGCCCTCGTCGCCTCTT 60.044 61.111 0.00 0.00 0.00 2.85
172 173 2.829458 GTAGCCCTCGTCGCCTCT 60.829 66.667 0.00 0.00 0.00 3.69
173 174 4.253257 CGTAGCCCTCGTCGCCTC 62.253 72.222 0.00 0.00 0.00 4.70
178 179 4.549516 GTCGCCGTAGCCCTCGTC 62.550 72.222 0.00 0.00 34.57 4.20
192 193 3.064987 ATCCTTCTCGCCCACGTCG 62.065 63.158 0.00 0.00 41.18 5.12
193 194 1.519455 CATCCTTCTCGCCCACGTC 60.519 63.158 0.00 0.00 41.18 4.34
194 195 2.579201 CATCCTTCTCGCCCACGT 59.421 61.111 0.00 0.00 41.18 4.49
195 196 2.892425 GCATCCTTCTCGCCCACG 60.892 66.667 0.00 0.00 42.01 4.94
196 197 2.892425 CGCATCCTTCTCGCCCAC 60.892 66.667 0.00 0.00 0.00 4.61
197 198 4.161295 CCGCATCCTTCTCGCCCA 62.161 66.667 0.00 0.00 0.00 5.36
198 199 4.918201 CCCGCATCCTTCTCGCCC 62.918 72.222 0.00 0.00 0.00 6.13
242 243 4.933064 CTCCTCCGATGTCGCCGC 62.933 72.222 0.00 0.00 38.18 6.53
243 244 4.933064 GCTCCTCCGATGTCGCCG 62.933 72.222 0.00 0.00 38.18 6.46
244 245 3.532155 AGCTCCTCCGATGTCGCC 61.532 66.667 0.00 0.00 38.18 5.54
245 246 2.279120 CAGCTCCTCCGATGTCGC 60.279 66.667 0.00 0.00 38.18 5.19
246 247 2.415010 CCAGCTCCTCCGATGTCG 59.585 66.667 0.00 0.00 39.44 4.35
247 248 2.801631 CCCCAGCTCCTCCGATGTC 61.802 68.421 0.00 0.00 0.00 3.06
248 249 2.611964 ATCCCCAGCTCCTCCGATGT 62.612 60.000 0.00 0.00 0.00 3.06
249 250 1.414061 AATCCCCAGCTCCTCCGATG 61.414 60.000 0.00 0.00 0.00 3.84
250 251 0.695803 AAATCCCCAGCTCCTCCGAT 60.696 55.000 0.00 0.00 0.00 4.18
251 252 1.306997 AAATCCCCAGCTCCTCCGA 60.307 57.895 0.00 0.00 0.00 4.55
252 253 1.153086 CAAATCCCCAGCTCCTCCG 60.153 63.158 0.00 0.00 0.00 4.63
253 254 1.228510 CCAAATCCCCAGCTCCTCC 59.771 63.158 0.00 0.00 0.00 4.30
254 255 1.228510 CCCAAATCCCCAGCTCCTC 59.771 63.158 0.00 0.00 0.00 3.71
255 256 3.001358 GCCCAAATCCCCAGCTCCT 62.001 63.158 0.00 0.00 0.00 3.69
256 257 2.442830 GCCCAAATCCCCAGCTCC 60.443 66.667 0.00 0.00 0.00 4.70
257 258 2.830370 CGCCCAAATCCCCAGCTC 60.830 66.667 0.00 0.00 0.00 4.09
258 259 4.447342 CCGCCCAAATCCCCAGCT 62.447 66.667 0.00 0.00 0.00 4.24
263 264 4.796495 ACTCGCCGCCCAAATCCC 62.796 66.667 0.00 0.00 0.00 3.85
264 265 3.202706 GACTCGCCGCCCAAATCC 61.203 66.667 0.00 0.00 0.00 3.01
265 266 3.564027 CGACTCGCCGCCCAAATC 61.564 66.667 0.00 0.00 0.00 2.17
274 275 2.516460 TAGCTCCTCCGACTCGCC 60.516 66.667 0.00 0.00 0.00 5.54
275 276 2.548295 CCTAGCTCCTCCGACTCGC 61.548 68.421 0.00 0.00 0.00 5.03
276 277 1.894756 CCCTAGCTCCTCCGACTCG 60.895 68.421 0.00 0.00 0.00 4.18
277 278 0.111639 ATCCCTAGCTCCTCCGACTC 59.888 60.000 0.00 0.00 0.00 3.36
278 279 0.558712 AATCCCTAGCTCCTCCGACT 59.441 55.000 0.00 0.00 0.00 4.18
279 280 1.069358 CAAATCCCTAGCTCCTCCGAC 59.931 57.143 0.00 0.00 0.00 4.79
280 281 1.414158 CAAATCCCTAGCTCCTCCGA 58.586 55.000 0.00 0.00 0.00 4.55
281 282 0.394565 CCAAATCCCTAGCTCCTCCG 59.605 60.000 0.00 0.00 0.00 4.63
282 283 0.767998 CCCAAATCCCTAGCTCCTCC 59.232 60.000 0.00 0.00 0.00 4.30
283 284 0.109532 GCCCAAATCCCTAGCTCCTC 59.890 60.000 0.00 0.00 0.00 3.71
284 285 1.700042 CGCCCAAATCCCTAGCTCCT 61.700 60.000 0.00 0.00 0.00 3.69
285 286 1.227973 CGCCCAAATCCCTAGCTCC 60.228 63.158 0.00 0.00 0.00 4.70
286 287 1.227973 CCGCCCAAATCCCTAGCTC 60.228 63.158 0.00 0.00 0.00 4.09
287 288 2.919043 CCGCCCAAATCCCTAGCT 59.081 61.111 0.00 0.00 0.00 3.32
288 289 2.907407 GCCGCCCAAATCCCTAGC 60.907 66.667 0.00 0.00 0.00 3.42
289 290 2.591715 CGCCGCCCAAATCCCTAG 60.592 66.667 0.00 0.00 0.00 3.02
290 291 3.084646 TCGCCGCCCAAATCCCTA 61.085 61.111 0.00 0.00 0.00 3.53
291 292 4.796495 GTCGCCGCCCAAATCCCT 62.796 66.667 0.00 0.00 0.00 4.20
294 295 3.861263 GACGTCGCCGCCCAAATC 61.861 66.667 0.00 0.00 37.70 2.17
304 305 3.170810 CTAGCTCCTCCGACGTCGC 62.171 68.421 31.73 17.02 38.18 5.19
305 306 2.535788 CCTAGCTCCTCCGACGTCG 61.536 68.421 30.33 30.33 39.44 5.12
306 307 2.188161 CCCTAGCTCCTCCGACGTC 61.188 68.421 5.18 5.18 0.00 4.34
307 308 1.997256 ATCCCTAGCTCCTCCGACGT 61.997 60.000 0.00 0.00 0.00 4.34
308 309 0.824182 AATCCCTAGCTCCTCCGACG 60.824 60.000 0.00 0.00 0.00 5.12
309 310 0.963225 GAATCCCTAGCTCCTCCGAC 59.037 60.000 0.00 0.00 0.00 4.79
310 311 0.556258 TGAATCCCTAGCTCCTCCGA 59.444 55.000 0.00 0.00 0.00 4.55
311 312 0.965439 CTGAATCCCTAGCTCCTCCG 59.035 60.000 0.00 0.00 0.00 4.63
312 313 1.347062 CCTGAATCCCTAGCTCCTCC 58.653 60.000 0.00 0.00 0.00 4.30
313 314 1.133009 TCCCTGAATCCCTAGCTCCTC 60.133 57.143 0.00 0.00 0.00 3.71
314 315 0.944999 TCCCTGAATCCCTAGCTCCT 59.055 55.000 0.00 0.00 0.00 3.69
315 316 1.347062 CTCCCTGAATCCCTAGCTCC 58.653 60.000 0.00 0.00 0.00 4.70
316 317 0.684535 GCTCCCTGAATCCCTAGCTC 59.315 60.000 0.00 0.00 0.00 4.09
317 318 1.118356 CGCTCCCTGAATCCCTAGCT 61.118 60.000 0.00 0.00 0.00 3.32
318 319 1.115930 TCGCTCCCTGAATCCCTAGC 61.116 60.000 0.00 0.00 0.00 3.42
319 320 0.676736 GTCGCTCCCTGAATCCCTAG 59.323 60.000 0.00 0.00 0.00 3.02
320 321 0.261991 AGTCGCTCCCTGAATCCCTA 59.738 55.000 0.00 0.00 0.00 3.53
321 322 1.002274 AGTCGCTCCCTGAATCCCT 59.998 57.895 0.00 0.00 0.00 4.20
322 323 1.144936 CAGTCGCTCCCTGAATCCC 59.855 63.158 0.00 0.00 31.38 3.85
323 324 1.144936 CCAGTCGCTCCCTGAATCC 59.855 63.158 0.00 0.00 31.38 3.01
324 325 0.460987 CACCAGTCGCTCCCTGAATC 60.461 60.000 0.00 0.00 31.38 2.52
325 326 0.904865 TCACCAGTCGCTCCCTGAAT 60.905 55.000 0.00 0.00 31.38 2.57
326 327 1.533033 TCACCAGTCGCTCCCTGAA 60.533 57.895 0.00 0.00 31.38 3.02
327 328 1.979155 CTCACCAGTCGCTCCCTGA 60.979 63.158 0.00 0.00 31.38 3.86
328 329 1.979155 TCTCACCAGTCGCTCCCTG 60.979 63.158 0.00 0.00 0.00 4.45
329 330 1.979693 GTCTCACCAGTCGCTCCCT 60.980 63.158 0.00 0.00 0.00 4.20
330 331 2.219325 CTGTCTCACCAGTCGCTCCC 62.219 65.000 0.00 0.00 0.00 4.30
331 332 1.214062 CTGTCTCACCAGTCGCTCC 59.786 63.158 0.00 0.00 0.00 4.70
332 333 0.387878 CACTGTCTCACCAGTCGCTC 60.388 60.000 0.00 0.00 43.70 5.03
333 334 0.823769 TCACTGTCTCACCAGTCGCT 60.824 55.000 0.00 0.00 43.70 4.93
334 335 0.387878 CTCACTGTCTCACCAGTCGC 60.388 60.000 0.00 0.00 43.70 5.19
335 336 0.955178 ACTCACTGTCTCACCAGTCG 59.045 55.000 0.00 0.00 43.70 4.18
336 337 1.683917 ACACTCACTGTCTCACCAGTC 59.316 52.381 0.00 0.00 43.70 3.51
337 338 1.410517 CACACTCACTGTCTCACCAGT 59.589 52.381 0.00 0.00 46.40 4.00
338 339 1.269988 CCACACTCACTGTCTCACCAG 60.270 57.143 0.00 0.00 38.45 4.00
339 340 0.752658 CCACACTCACTGTCTCACCA 59.247 55.000 0.00 0.00 0.00 4.17
340 341 1.000283 CTCCACACTCACTGTCTCACC 60.000 57.143 0.00 0.00 0.00 4.02
341 342 1.957177 TCTCCACACTCACTGTCTCAC 59.043 52.381 0.00 0.00 0.00 3.51
342 343 2.234143 CTCTCCACACTCACTGTCTCA 58.766 52.381 0.00 0.00 0.00 3.27
343 344 2.227865 GACTCTCCACACTCACTGTCTC 59.772 54.545 0.00 0.00 0.00 3.36
344 345 2.235016 GACTCTCCACACTCACTGTCT 58.765 52.381 0.00 0.00 0.00 3.41
345 346 1.957177 TGACTCTCCACACTCACTGTC 59.043 52.381 0.00 0.00 0.00 3.51
346 347 1.683917 GTGACTCTCCACACTCACTGT 59.316 52.381 0.00 0.00 37.04 3.55
347 348 1.335415 CGTGACTCTCCACACTCACTG 60.335 57.143 0.00 0.00 36.89 3.66
348 349 0.955178 CGTGACTCTCCACACTCACT 59.045 55.000 0.00 0.00 36.89 3.41
349 350 0.952280 TCGTGACTCTCCACACTCAC 59.048 55.000 0.00 0.00 36.89 3.51
350 351 0.952280 GTCGTGACTCTCCACACTCA 59.048 55.000 0.00 0.00 36.89 3.41
351 352 0.952280 TGTCGTGACTCTCCACACTC 59.048 55.000 1.23 0.00 36.89 3.51
352 353 1.338337 CTTGTCGTGACTCTCCACACT 59.662 52.381 1.23 0.00 36.89 3.55
353 354 1.067212 ACTTGTCGTGACTCTCCACAC 59.933 52.381 1.23 0.00 36.89 3.82
354 355 1.067060 CACTTGTCGTGACTCTCCACA 59.933 52.381 1.23 0.00 46.81 4.17
355 356 1.772182 CACTTGTCGTGACTCTCCAC 58.228 55.000 1.23 0.00 46.81 4.02
364 365 1.661509 TCTGCGCTCACTTGTCGTG 60.662 57.895 9.73 0.00 45.18 4.35
365 366 1.661821 GTCTGCGCTCACTTGTCGT 60.662 57.895 9.73 0.00 0.00 4.34
366 367 1.372251 AGTCTGCGCTCACTTGTCG 60.372 57.895 9.73 0.00 0.00 4.35
367 368 1.895280 GCAGTCTGCGCTCACTTGTC 61.895 60.000 9.53 0.00 31.71 3.18
368 369 1.958205 GCAGTCTGCGCTCACTTGT 60.958 57.895 9.53 0.00 31.71 3.16
369 370 2.858868 GCAGTCTGCGCTCACTTG 59.141 61.111 9.53 6.66 31.71 3.16
379 380 3.551496 TTTGCCCCTCCGCAGTCTG 62.551 63.158 0.00 0.00 40.53 3.51
380 381 2.142292 ATTTTGCCCCTCCGCAGTCT 62.142 55.000 0.00 0.00 40.53 3.24
381 382 1.678970 ATTTTGCCCCTCCGCAGTC 60.679 57.895 0.00 0.00 40.53 3.51
382 383 1.978617 CATTTTGCCCCTCCGCAGT 60.979 57.895 0.00 0.00 40.53 4.40
383 384 2.713967 CCATTTTGCCCCTCCGCAG 61.714 63.158 0.00 0.00 40.53 5.18
384 385 2.679642 CCATTTTGCCCCTCCGCA 60.680 61.111 0.00 0.00 36.85 5.69
385 386 3.460868 CCCATTTTGCCCCTCCGC 61.461 66.667 0.00 0.00 0.00 5.54
386 387 0.902516 TTTCCCATTTTGCCCCTCCG 60.903 55.000 0.00 0.00 0.00 4.63
387 388 0.613260 GTTTCCCATTTTGCCCCTCC 59.387 55.000 0.00 0.00 0.00 4.30
388 389 1.347062 TGTTTCCCATTTTGCCCCTC 58.653 50.000 0.00 0.00 0.00 4.30
389 390 1.419762 GTTGTTTCCCATTTTGCCCCT 59.580 47.619 0.00 0.00 0.00 4.79
390 391 1.141858 TGTTGTTTCCCATTTTGCCCC 59.858 47.619 0.00 0.00 0.00 5.80
391 392 2.616376 GTTGTTGTTTCCCATTTTGCCC 59.384 45.455 0.00 0.00 0.00 5.36
392 393 3.274288 TGTTGTTGTTTCCCATTTTGCC 58.726 40.909 0.00 0.00 0.00 4.52
393 394 5.497635 AATGTTGTTGTTTCCCATTTTGC 57.502 34.783 0.00 0.00 0.00 3.68
394 395 6.686253 CGAAAATGTTGTTGTTTCCCATTTTG 59.314 34.615 11.93 3.59 42.56 2.44
395 396 6.372937 ACGAAAATGTTGTTGTTTCCCATTTT 59.627 30.769 8.02 8.02 44.17 1.82
396 397 5.877564 ACGAAAATGTTGTTGTTTCCCATTT 59.122 32.000 0.00 0.00 37.33 2.32
397 398 5.423886 ACGAAAATGTTGTTGTTTCCCATT 58.576 33.333 0.00 0.00 0.00 3.16
398 399 5.017294 ACGAAAATGTTGTTGTTTCCCAT 57.983 34.783 0.00 0.00 0.00 4.00
399 400 4.457834 ACGAAAATGTTGTTGTTTCCCA 57.542 36.364 0.00 0.00 0.00 4.37
400 401 4.443063 GCTACGAAAATGTTGTTGTTTCCC 59.557 41.667 0.00 0.00 0.00 3.97
401 402 4.145756 CGCTACGAAAATGTTGTTGTTTCC 59.854 41.667 0.00 0.00 0.00 3.13
402 403 4.731480 ACGCTACGAAAATGTTGTTGTTTC 59.269 37.500 0.00 0.00 0.00 2.78
403 404 4.664188 ACGCTACGAAAATGTTGTTGTTT 58.336 34.783 0.00 0.00 0.00 2.83
404 405 4.281525 ACGCTACGAAAATGTTGTTGTT 57.718 36.364 0.00 0.00 0.00 2.83
405 406 3.955771 ACGCTACGAAAATGTTGTTGT 57.044 38.095 0.00 0.00 0.00 3.32
406 407 5.702883 GTAACGCTACGAAAATGTTGTTG 57.297 39.130 0.00 0.00 0.00 3.33
419 420 6.810286 TGTAGTTGAAATTTCGTAACGCTAC 58.190 36.000 13.34 15.77 0.00 3.58
420 421 7.405469 TTGTAGTTGAAATTTCGTAACGCTA 57.595 32.000 13.34 6.44 0.00 4.26
421 422 5.910637 TGTAGTTGAAATTTCGTAACGCT 57.089 34.783 13.34 7.26 0.00 5.07
422 423 7.543127 AATTGTAGTTGAAATTTCGTAACGC 57.457 32.000 13.34 11.09 0.00 4.84
429 430 9.989394 GCGTTTAGAAATTGTAGTTGAAATTTC 57.011 29.630 11.41 11.41 46.23 2.17
430 431 9.744468 AGCGTTTAGAAATTGTAGTTGAAATTT 57.256 25.926 0.00 0.00 38.39 1.82
431 432 9.394477 GAGCGTTTAGAAATTGTAGTTGAAATT 57.606 29.630 0.00 0.00 0.00 1.82
432 433 8.784043 AGAGCGTTTAGAAATTGTAGTTGAAAT 58.216 29.630 0.00 0.00 0.00 2.17
433 434 8.149973 AGAGCGTTTAGAAATTGTAGTTGAAA 57.850 30.769 0.00 0.00 0.00 2.69
434 435 7.724305 AGAGCGTTTAGAAATTGTAGTTGAA 57.276 32.000 0.00 0.00 0.00 2.69
435 436 7.724305 AAGAGCGTTTAGAAATTGTAGTTGA 57.276 32.000 0.00 0.00 0.00 3.18
450 451 8.718734 CCTCTGTAAACTTTTATAAGAGCGTTT 58.281 33.333 13.76 6.02 36.27 3.60
451 452 7.333672 CCCTCTGTAAACTTTTATAAGAGCGTT 59.666 37.037 13.76 1.38 36.27 4.84
452 453 6.817140 CCCTCTGTAAACTTTTATAAGAGCGT 59.183 38.462 13.76 0.00 36.27 5.07
453 454 7.039882 TCCCTCTGTAAACTTTTATAAGAGCG 58.960 38.462 13.76 9.07 36.27 5.03
454 455 8.041919 ACTCCCTCTGTAAACTTTTATAAGAGC 58.958 37.037 13.76 0.00 36.27 4.09
470 471 8.670490 TGACTTCATATATACTACTCCCTCTGT 58.330 37.037 0.00 0.00 0.00 3.41
471 472 8.952278 GTGACTTCATATATACTACTCCCTCTG 58.048 40.741 0.00 0.00 0.00 3.35
472 473 8.670490 TGTGACTTCATATATACTACTCCCTCT 58.330 37.037 0.00 0.00 0.00 3.69
473 474 8.865420 TGTGACTTCATATATACTACTCCCTC 57.135 38.462 0.00 0.00 0.00 4.30
474 475 8.449625 ACTGTGACTTCATATATACTACTCCCT 58.550 37.037 0.00 0.00 0.00 4.20
475 476 8.638629 ACTGTGACTTCATATATACTACTCCC 57.361 38.462 0.00 0.00 0.00 4.30
478 479 9.869667 AGGAACTGTGACTTCATATATACTACT 57.130 33.333 0.00 0.00 37.18 2.57
481 482 8.424918 CCAAGGAACTGTGACTTCATATATACT 58.575 37.037 0.00 0.00 40.86 2.12
482 483 7.657761 CCCAAGGAACTGTGACTTCATATATAC 59.342 40.741 0.00 0.00 40.86 1.47
506 507 2.124942 CGAGCTTCCTTCCTGCCC 60.125 66.667 0.00 0.00 0.00 5.36
547 548 8.644318 TGGTCTAACTAGCGATATTTTCTTTC 57.356 34.615 0.00 0.00 0.00 2.62
557 558 4.647853 TGTGGTTATGGTCTAACTAGCGAT 59.352 41.667 0.00 0.00 0.00 4.58
595 596 0.179936 CTCTTCTCATGGCCTGGTCC 59.820 60.000 3.32 0.00 0.00 4.46
801 805 5.884792 AGACGGTACTGTACTAGTATTTGCT 59.115 40.000 16.79 8.12 43.44 3.91
802 806 6.129053 AGACGGTACTGTACTAGTATTTGC 57.871 41.667 16.79 6.37 43.44 3.68
803 807 8.119226 GTGTAGACGGTACTGTACTAGTATTTG 58.881 40.741 16.79 2.42 43.44 2.32
804 808 8.043710 AGTGTAGACGGTACTGTACTAGTATTT 58.956 37.037 16.79 9.40 43.44 1.40
807 811 6.531503 AGTGTAGACGGTACTGTACTAGTA 57.468 41.667 16.79 0.00 40.89 1.82
809 813 7.381948 CAGATAGTGTAGACGGTACTGTACTAG 59.618 44.444 16.79 13.36 0.00 2.57
811 815 6.047870 CAGATAGTGTAGACGGTACTGTACT 58.952 44.000 16.79 10.07 0.00 2.73
815 819 4.197750 ACCAGATAGTGTAGACGGTACTG 58.802 47.826 0.00 0.00 0.00 2.74
833 837 9.288576 TGATTGCAAGGAAGATATTATAACCAG 57.711 33.333 4.94 0.00 0.00 4.00
842 846 4.166725 TGGGAGTGATTGCAAGGAAGATAT 59.833 41.667 4.94 0.00 0.00 1.63
871 875 5.163023 ACCTTGACCAACCCAACTTTATACT 60.163 40.000 0.00 0.00 0.00 2.12
875 879 3.203487 AGACCTTGACCAACCCAACTTTA 59.797 43.478 0.00 0.00 0.00 1.85
876 880 2.024369 AGACCTTGACCAACCCAACTTT 60.024 45.455 0.00 0.00 0.00 2.66
994 1015 4.554036 GGCACCGCCCATCTCTCC 62.554 72.222 0.00 0.00 44.06 3.71
1122 1143 2.203640 TGTGGCTCGGTCCTCTGT 60.204 61.111 0.00 0.00 0.00 3.41
1246 1330 1.524621 CGCTGGGATCTTGCCGAAT 60.525 57.895 0.00 0.00 0.00 3.34
1280 1364 6.590292 GTGAATTTCATACCGAAGAGAGTCAA 59.410 38.462 1.78 0.00 34.32 3.18
1310 1395 8.789762 TGTATGCTATGAATTGATTCTTGATGG 58.210 33.333 5.42 0.00 37.67 3.51
1466 1600 1.918262 TCCACCATGGCTGATTCTTCT 59.082 47.619 13.04 0.00 37.47 2.85
1598 1732 1.432657 GAGCTTCCCGACGTACTCC 59.567 63.158 0.00 0.00 0.00 3.85
1823 1957 4.227134 CCGAGGTGGATGAGCGGG 62.227 72.222 0.00 0.00 42.00 6.13
1853 1987 5.251081 CGACATTCAATTTAAGCAGACGAG 58.749 41.667 0.00 0.00 0.00 4.18
1873 2007 8.955061 ATGCATATATAAACTGAATTTGCGAC 57.045 30.769 0.00 0.00 32.38 5.19
2010 2176 4.155462 ACGAGCGTTTAGATCACTAAGTGA 59.845 41.667 0.00 0.00 46.90 3.41
2011 2177 4.413087 ACGAGCGTTTAGATCACTAAGTG 58.587 43.478 0.00 0.00 39.36 3.16
2012 2178 4.698583 ACGAGCGTTTAGATCACTAAGT 57.301 40.909 0.00 0.00 39.36 2.24
2013 2179 8.951954 AATATACGAGCGTTTAGATCACTAAG 57.048 34.615 0.00 0.00 39.36 2.18
2014 2180 9.390795 GAAATATACGAGCGTTTAGATCACTAA 57.609 33.333 0.00 0.00 34.30 2.24
2015 2181 8.781196 AGAAATATACGAGCGTTTAGATCACTA 58.219 33.333 0.00 0.00 34.30 2.74
2016 2182 7.649973 AGAAATATACGAGCGTTTAGATCACT 58.350 34.615 0.00 0.00 34.30 3.41
2017 2183 7.854934 AGAAATATACGAGCGTTTAGATCAC 57.145 36.000 0.00 0.00 34.30 3.06
2018 2184 8.752254 CAAAGAAATATACGAGCGTTTAGATCA 58.248 33.333 0.00 0.00 34.30 2.92
2019 2185 8.753175 ACAAAGAAATATACGAGCGTTTAGATC 58.247 33.333 0.00 1.38 0.00 2.75
2020 2186 8.540492 CACAAAGAAATATACGAGCGTTTAGAT 58.460 33.333 0.00 0.00 0.00 1.98
2021 2187 7.009815 CCACAAAGAAATATACGAGCGTTTAGA 59.990 37.037 0.00 0.00 0.00 2.10
2022 2188 7.009815 TCCACAAAGAAATATACGAGCGTTTAG 59.990 37.037 0.00 0.00 0.00 1.85
2023 2189 6.812656 TCCACAAAGAAATATACGAGCGTTTA 59.187 34.615 0.00 0.00 0.00 2.01
2024 2190 5.640357 TCCACAAAGAAATATACGAGCGTTT 59.360 36.000 0.00 0.00 0.00 3.60
2025 2191 5.172934 TCCACAAAGAAATATACGAGCGTT 58.827 37.500 0.00 0.00 0.00 4.84
2026 2192 4.751060 TCCACAAAGAAATATACGAGCGT 58.249 39.130 0.00 0.00 0.00 5.07
2027 2193 5.276868 CCTTCCACAAAGAAATATACGAGCG 60.277 44.000 0.00 0.00 37.12 5.03
2028 2194 5.815740 TCCTTCCACAAAGAAATATACGAGC 59.184 40.000 0.00 0.00 37.12 5.03
2029 2195 7.042335 ACTCCTTCCACAAAGAAATATACGAG 58.958 38.462 0.00 0.00 37.12 4.18
2030 2196 6.942976 ACTCCTTCCACAAAGAAATATACGA 58.057 36.000 0.00 0.00 37.12 3.43
2031 2197 7.980099 AGTACTCCTTCCACAAAGAAATATACG 59.020 37.037 0.00 0.00 37.12 3.06
2076 2242 7.231317 TGAGTTTAGTGCATCTCATTTTTCCTT 59.769 33.333 0.00 0.00 32.95 3.36
2078 2244 6.913170 TGAGTTTAGTGCATCTCATTTTTCC 58.087 36.000 0.00 0.00 32.95 3.13
2079 2245 8.239314 TGATGAGTTTAGTGCATCTCATTTTTC 58.761 33.333 16.23 9.44 44.33 2.29
2089 2255 6.202379 CAGATTCGATGATGAGTTTAGTGCAT 59.798 38.462 0.00 0.00 0.00 3.96
2110 2276 1.627329 AGCGCCATCATACCATCAGAT 59.373 47.619 2.29 0.00 0.00 2.90
2116 2282 1.447217 CTCCAGCGCCATCATACCA 59.553 57.895 2.29 0.00 0.00 3.25
2117 2283 1.302033 CCTCCAGCGCCATCATACC 60.302 63.158 2.29 0.00 0.00 2.73
2129 2295 2.894731 TGGATGATAGGTAGCCTCCAG 58.105 52.381 0.00 0.00 32.68 3.86
2139 2305 7.225538 GTCCGAATATAAGCATTGGATGATAGG 59.774 40.741 0.00 0.00 0.00 2.57
2142 2308 6.596888 CAGTCCGAATATAAGCATTGGATGAT 59.403 38.462 0.00 0.00 0.00 2.45
2176 2343 6.808008 ACAAACTCCATGACTTGTAATGAG 57.192 37.500 0.00 0.00 30.41 2.90
2210 2377 4.584325 TGCTAGCAAACTCCATGACTTTTT 59.416 37.500 16.84 0.00 0.00 1.94
2211 2378 4.144297 TGCTAGCAAACTCCATGACTTTT 58.856 39.130 16.84 0.00 0.00 2.27
2212 2379 3.754965 TGCTAGCAAACTCCATGACTTT 58.245 40.909 16.84 0.00 0.00 2.66
2213 2380 3.423539 TGCTAGCAAACTCCATGACTT 57.576 42.857 16.84 0.00 0.00 3.01
2214 2381 3.054875 TGATGCTAGCAAACTCCATGACT 60.055 43.478 23.54 0.00 0.00 3.41
2215 2382 3.273434 TGATGCTAGCAAACTCCATGAC 58.727 45.455 23.54 4.11 0.00 3.06
2216 2383 3.054875 ACTGATGCTAGCAAACTCCATGA 60.055 43.478 23.54 0.00 0.00 3.07
2217 2384 3.276857 ACTGATGCTAGCAAACTCCATG 58.723 45.455 23.54 10.09 0.00 3.66
2218 2385 3.199508 AGACTGATGCTAGCAAACTCCAT 59.800 43.478 23.54 2.30 0.00 3.41
2219 2386 2.568956 AGACTGATGCTAGCAAACTCCA 59.431 45.455 23.54 13.13 0.00 3.86
2220 2387 3.258971 AGACTGATGCTAGCAAACTCC 57.741 47.619 23.54 11.24 0.00 3.85
2221 2388 3.999663 ACAAGACTGATGCTAGCAAACTC 59.000 43.478 23.54 15.56 0.00 3.01
2222 2389 3.999663 GACAAGACTGATGCTAGCAAACT 59.000 43.478 23.54 13.16 0.00 2.66
2223 2390 3.126000 GGACAAGACTGATGCTAGCAAAC 59.874 47.826 23.54 18.60 0.00 2.93
2224 2391 3.244526 TGGACAAGACTGATGCTAGCAAA 60.245 43.478 23.54 12.37 0.00 3.68
2225 2392 2.302733 TGGACAAGACTGATGCTAGCAA 59.697 45.455 23.54 5.03 0.00 3.91
2226 2393 1.901833 TGGACAAGACTGATGCTAGCA 59.098 47.619 21.85 21.85 0.00 3.49
2232 2399 5.268118 TGCTATAGTGGACAAGACTGATG 57.732 43.478 0.84 0.00 0.00 3.07
2249 2416 4.459852 ACCATATTTGCTTCCCTGCTAT 57.540 40.909 0.00 0.00 0.00 2.97
2250 2417 3.951563 ACCATATTTGCTTCCCTGCTA 57.048 42.857 0.00 0.00 0.00 3.49
2256 2423 7.992180 CAAATCAACTACCATATTTGCTTCC 57.008 36.000 0.00 0.00 33.87 3.46
2268 2435 3.658757 TTGCCAAGCAAATCAACTACC 57.341 42.857 0.00 0.00 45.96 3.18
2279 2446 2.758736 AAACAGTGTTTTGCCAAGCA 57.241 40.000 15.58 0.00 36.47 3.91
2280 2447 3.001228 GCTAAAACAGTGTTTTGCCAAGC 59.999 43.478 33.94 29.81 34.47 4.01
2281 2448 4.180057 TGCTAAAACAGTGTTTTGCCAAG 58.820 39.130 33.94 25.86 38.11 3.61
2295 3668 7.965045 AGATTCAGACTCGTTAATGCTAAAAC 58.035 34.615 0.00 0.00 0.00 2.43
2300 3673 5.724328 TCAAGATTCAGACTCGTTAATGCT 58.276 37.500 0.00 0.00 0.00 3.79
2308 3681 6.073058 TGTTGGATTTTCAAGATTCAGACTCG 60.073 38.462 0.00 0.00 0.00 4.18
2309 3682 7.206981 TGTTGGATTTTCAAGATTCAGACTC 57.793 36.000 0.00 0.00 0.00 3.36
2313 3686 6.154021 AGGGATGTTGGATTTTCAAGATTCAG 59.846 38.462 0.00 0.00 31.93 3.02
2323 3696 5.336102 ACTGATGAAGGGATGTTGGATTTT 58.664 37.500 0.00 0.00 0.00 1.82
2329 3702 7.465916 CGTTTACATACTGATGAAGGGATGTTG 60.466 40.741 0.00 0.00 37.59 3.33
2332 3705 6.201044 GTCGTTTACATACTGATGAAGGGATG 59.799 42.308 0.00 0.00 36.48 3.51
2339 3723 7.400599 AGTTAGGTCGTTTACATACTGATGA 57.599 36.000 0.00 0.00 36.48 2.92
2407 3791 6.174049 GCACAACCTCTTTTCCTAGTCTTAT 58.826 40.000 0.00 0.00 0.00 1.73
2417 3801 1.202245 TGCAACGCACAACCTCTTTTC 60.202 47.619 0.00 0.00 31.71 2.29
2435 3819 6.128929 GGATGTGTTTTTAATTCTTCCGTTGC 60.129 38.462 0.00 0.00 0.00 4.17
2436 3820 6.364976 GGGATGTGTTTTTAATTCTTCCGTTG 59.635 38.462 0.00 0.00 0.00 4.10
2444 3828 7.158021 TCATGGTTGGGATGTGTTTTTAATTC 58.842 34.615 0.00 0.00 0.00 2.17
2447 3831 6.678568 ATCATGGTTGGGATGTGTTTTTAA 57.321 33.333 0.00 0.00 0.00 1.52
2448 3832 6.268617 TGAATCATGGTTGGGATGTGTTTTTA 59.731 34.615 0.00 0.00 0.00 1.52
2449 3833 5.071519 TGAATCATGGTTGGGATGTGTTTTT 59.928 36.000 0.00 0.00 0.00 1.94
2450 3834 4.592351 TGAATCATGGTTGGGATGTGTTTT 59.408 37.500 0.00 0.00 0.00 2.43
2451 3835 4.158786 TGAATCATGGTTGGGATGTGTTT 58.841 39.130 0.00 0.00 0.00 2.83
2452 3836 3.777087 TGAATCATGGTTGGGATGTGTT 58.223 40.909 0.00 0.00 0.00 3.32
2453 3837 3.454719 TGAATCATGGTTGGGATGTGT 57.545 42.857 0.00 0.00 0.00 3.72
2455 3839 4.019174 GTCTTGAATCATGGTTGGGATGT 58.981 43.478 0.00 0.00 0.00 3.06
2456 3840 3.382546 GGTCTTGAATCATGGTTGGGATG 59.617 47.826 0.00 0.00 0.00 3.51
2458 3842 2.291540 GGGTCTTGAATCATGGTTGGGA 60.292 50.000 0.00 0.00 0.00 4.37
2459 3843 2.102578 GGGTCTTGAATCATGGTTGGG 58.897 52.381 0.00 0.00 0.00 4.12
2483 3870 8.918658 CATGTTGAAATAAAGGAAGTTGACATG 58.081 33.333 0.00 0.00 35.26 3.21
2485 3872 8.134895 GTCATGTTGAAATAAAGGAAGTTGACA 58.865 33.333 0.00 0.00 0.00 3.58
2486 3873 8.134895 TGTCATGTTGAAATAAAGGAAGTTGAC 58.865 33.333 0.00 0.00 0.00 3.18
2494 3881 5.722263 TGGCATGTCATGTTGAAATAAAGG 58.278 37.500 14.26 0.00 0.00 3.11
2496 3883 7.660617 ACAAATGGCATGTCATGTTGAAATAAA 59.339 29.630 27.12 0.00 0.00 1.40
2524 3911 3.691609 GTGGAAAGAAGGATAAGTGGCAG 59.308 47.826 0.00 0.00 0.00 4.85
2529 3916 3.197983 CGAGGGTGGAAAGAAGGATAAGT 59.802 47.826 0.00 0.00 0.00 2.24
2552 3939 2.819595 CATTGAGGCCACCGTCGG 60.820 66.667 10.48 10.48 0.00 4.79
2599 3986 4.187694 CCAAGAGATGCCTTAGAGTTGAC 58.812 47.826 0.00 0.00 0.00 3.18
2604 3991 2.996249 TGCCAAGAGATGCCTTAGAG 57.004 50.000 0.00 0.00 0.00 2.43
2605 3992 5.372343 TTTATGCCAAGAGATGCCTTAGA 57.628 39.130 0.00 0.00 0.00 2.10
2611 3998 3.638160 TCCCATTTTATGCCAAGAGATGC 59.362 43.478 0.00 0.00 0.00 3.91
2619 4006 7.180051 ACAAAGTAGATTTCCCATTTTATGCCA 59.820 33.333 0.00 0.00 0.00 4.92
2627 4016 7.441836 GTGGAAAACAAAGTAGATTTCCCATT 58.558 34.615 12.21 0.00 44.95 3.16
2631 4020 5.279306 GGGGTGGAAAACAAAGTAGATTTCC 60.279 44.000 8.76 8.76 45.45 3.13
2639 4028 1.396607 GCGGGGGTGGAAAACAAAGT 61.397 55.000 0.00 0.00 0.00 2.66
2649 4038 2.596338 AAAACTTCGCGGGGGTGG 60.596 61.111 6.13 0.00 0.00 4.61
2656 4045 2.173382 CCTCGGCAAAACTTCGCG 59.827 61.111 0.00 0.00 0.00 5.87
2657 4046 2.126850 GCCTCGGCAAAACTTCGC 60.127 61.111 2.41 0.00 41.49 4.70
2667 4056 3.136123 ACACATGCATGCCTCGGC 61.136 61.111 26.53 0.00 42.35 5.54
2668 4057 2.767445 CCACACATGCATGCCTCGG 61.767 63.158 26.53 17.12 0.00 4.63
2669 4058 2.795973 CCACACATGCATGCCTCG 59.204 61.111 26.53 14.52 0.00 4.63
2709 4098 4.443978 AGACATGGACCTAATGGGATTG 57.556 45.455 0.00 0.00 38.76 2.67
2714 4103 9.573166 TTGATATAAAAGACATGGACCTAATGG 57.427 33.333 0.00 0.00 39.83 3.16
2726 4115 8.052141 TGGGACATCATGTTGATATAAAAGACA 58.948 33.333 10.74 0.00 34.28 3.41
2758 4147 4.234574 CGGAAAGGAAAATAAGTGGCAAC 58.765 43.478 0.00 0.00 0.00 4.17
2759 4148 3.305744 GCGGAAAGGAAAATAAGTGGCAA 60.306 43.478 0.00 0.00 0.00 4.52
2760 4149 2.230266 GCGGAAAGGAAAATAAGTGGCA 59.770 45.455 0.00 0.00 0.00 4.92
2761 4150 2.416836 GGCGGAAAGGAAAATAAGTGGC 60.417 50.000 0.00 0.00 0.00 5.01
2762 4151 2.165641 GGGCGGAAAGGAAAATAAGTGG 59.834 50.000 0.00 0.00 0.00 4.00
2763 4152 3.089284 AGGGCGGAAAGGAAAATAAGTG 58.911 45.455 0.00 0.00 0.00 3.16
2764 4153 3.245122 TGAGGGCGGAAAGGAAAATAAGT 60.245 43.478 0.00 0.00 0.00 2.24
2765 4154 3.128764 GTGAGGGCGGAAAGGAAAATAAG 59.871 47.826 0.00 0.00 0.00 1.73
2766 4155 3.086282 GTGAGGGCGGAAAGGAAAATAA 58.914 45.455 0.00 0.00 0.00 1.40
2767 4156 2.718563 GTGAGGGCGGAAAGGAAAATA 58.281 47.619 0.00 0.00 0.00 1.40
2768 4157 1.545841 GTGAGGGCGGAAAGGAAAAT 58.454 50.000 0.00 0.00 0.00 1.82
2769 4158 0.887387 CGTGAGGGCGGAAAGGAAAA 60.887 55.000 0.00 0.00 0.00 2.29
2770 4159 1.302192 CGTGAGGGCGGAAAGGAAA 60.302 57.895 0.00 0.00 0.00 3.13
2771 4160 2.211410 TCGTGAGGGCGGAAAGGAA 61.211 57.895 0.00 0.00 0.00 3.36
2772 4161 2.602267 TCGTGAGGGCGGAAAGGA 60.602 61.111 0.00 0.00 0.00 3.36
2773 4162 2.434359 GTCGTGAGGGCGGAAAGG 60.434 66.667 0.00 0.00 0.00 3.11
2786 4175 2.654877 CACTAAGGCCACCGTCGT 59.345 61.111 5.01 0.00 0.00 4.34
2792 4181 2.076863 CTGTGTTAGCACTAAGGCCAC 58.923 52.381 5.01 0.00 45.44 5.01
2795 4184 2.347731 GGACTGTGTTAGCACTAAGGC 58.652 52.381 11.22 2.93 45.44 4.35
2815 4204 1.867698 GCCCACATTCAAACACGTTGG 60.868 52.381 0.00 0.00 37.85 3.77
2838 4227 4.285863 ACAGAGAGAGACCAATCTTAGGG 58.714 47.826 0.00 0.00 34.34 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.