>input_sequence_66788
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------------------------------------------------------------ATGGGCGGTGCCGTGAAGGT
GTACGGGGTGGCGGCGTCTCCGTTCGTCGCGACGGTGCTGCTTTGCCTGGAGGAGGTCGGCGCCGACTACGAGCTCCTCC
CCCTCGACATGGCTGCGCGGGAACAGAGGACCGAGCCACACCTCTCTCGGAACGTATTCAGAAACAGAGATA--------
-----------------------------------------------GTTTATACTTTGA-T----TATGTTTCTATCTC
GCTCCATTTTCTTATGCAAG--TCTTC-GTATGGTTCAATCTCGCAGCCATTCGGCAAGATCCCAGCGTTGGAGGACGGG
GAGTTGACTCTCTTCGGTA-TGAAATTCACACACCCA-TCAAGAATCAATTCAT---AGCAT------------------
---ACAAACTATGATTAGA-T------------TTTCAATTGATCCACACATCGGTAATAT--GATCTCAGAATCGCGCG
CGATTTCTCGGTACGTGCTCCGCAAGTACGG------AGGCACCAGCG---CCACCGATCTTCTAAGGGCATCCAGCCTA
GAAGAATCAGCCATGGTGGACGTGTGGATGGAGGTGGAGGCCCACCAGTACCAGCCGGCCATCGCCAACGTCGTCCGGCA
GTGCGTCATCCTGCCGTTCATCGGCGGCGCGCGAGACCAGGCCGTCGTCGAGGAGTACGTCGGGAAGCTCGAGAAGGTCC
TCGACGTGTACGAGGCGCGGCTGTCGAGCTCGCCGTACCTCGCCGGGGACTTCTTCAGCCTCGCCGACCTCGTCCACTTC
GGCTTCACCTACTGCCTGGTGGCCGGCACCGAGTACGCGACGCTGCTGGAGTCGCGCGCGAGCGTCATGGCGTGGTGGGG
GCGCATCATGGCCAGGCCCTCGGTGAAGAAAGTGGCCCCGCTCATCCACCTCGGATTGAAGCTATCCTCGTCTGCTTAA-
--------------------------------------------------------------------------------
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---------------
>chr1B_1_TraesCS1B01G114300
ACGGGCGACGGCCTCCTACTTCATACTCCCGCTGAGTATACAACAACTTCAGATCCAGCCAGCAGCATAGCTCCTCCCGC
TGGTCCTCGCCGCCGTTGGTGCCCGCGCTCCTCTCGGCTTGACTAAAAAAGGCACCTTTAACTCCATCGAGAGGTGACGC
GGGGCGAGAGGAAGAGGCGACGAGGGCTACGGCGACGTGGGCGAGAAGGATGCGGGCGGCCACGCGGGCGAGGGGGATGC
GGGCGGCGACATCGGAGGAGCTGGGGATTTGGGCGGCGAGTCGGAGGAGCTAGGGATTTGGGCGGCGACGTCGGAGGAGC
TAGGGATTCAGGGAGCGACTGGTGAGACAGTGAGTGTGGAGAGTCACGACAAGTGAGCGCAGACTGCGGAGGGGCAAAAT
GGGAAACAACAACATTTTCGTAGCGTTACGAAATTTCAACTACAATTTCTAAACGCTCTTATAAAAGTTTACAGAGGGAG
TAGTATATATGAAGTCACAGTTCCTTGGGCAGGAAGGAAGCTCGAATTATGAAACAAGTCAAGAACAGAAAGAAAATATC
GCTAGTTAGACCATAACCACACCAAATCTTCCCAGGGACCAGGCCATGAGAAGAGTATAGTATATCTACACCATTTGGAG
TGAAAAAAGCAAATCCCGTCGAGGACTACTATTTGGTTATA---TGGACAAAGTCGTAATTCCTTGGGCGTGAAGGAAGC
TCGATTCATGAATCAAGTCAAAGACAATAAGAAACTATCACTTGGTTGACCATAAGCACACCAAATCTTGCTGAGATCAG
ATCAAGCAAATACTAGTACAGTACCGTCTACACTATCTGGTTATAATATCTTCCTTGCAATCACTCCCATCACAAGTATA
--AAGTTGGGTTGGTCAAGGTCTGCTTAAGCACGCACAAATCAGCAC-------TAAAAACAGAGCTGCTTAATTACAGC
TCTCT------GTGTGTGTC--AGAGAGAAGCTGTGTGGGTGTGTGAGAGGGAGGGAGAGATGGGCGGTGCCGTGAAGGT
GTACGGGGTGGCGGCGTCTCCGTTCGTCGCGACGGTGCTGCTTTGCCTGGAGGAGGTCGGCGCCGACTACGAGCTCCTCC
CCCTCGACATGGCTGCGCGGGAACAGAGGACCGAGCCACACCTCTCTCGGAACGTATTCAGAAACAGAGATA--------
-----------------------------------------------GTTTATACTTTGA-T----TATGTTTCTATCTC
GCTCCATTTTCTTATGCAAG--TCTTC-GTATGGTTCAATCTCGCAGCCATTCGGCAAGATCCCAGCGTTGGAGGACGGG
GAGTTGACTCTCTTCGGTA-TGAAATTCACACACCCA-TCAAGAATCAATTCAT---AGCAT------------------
---ACAAACTATGATTAGA-T------------TTTCAATTGATCCACACATCGGTAATAT--GATCTCAGAATCGCGCG
CGATTTCTCGGTACGTGCTCCGCAAGTACGG------AGGCACCAGCG---CCACCGATCTTCTAAGGGCATCCAGCCTA
GAAGAATCAGCCATGGTGGACGTGTGGATGGAGGTGGAGGCCCACCAGTACCAGCCGGCCATCGCCAACGTCGTCCGGCA
GTGCGTCATCCTGCCGTTCATCGGCGGCGCGCGAGACCAGGCCGTCGTCGAGGAGTACGTCGGGAAGCTCGAGAAGGTCC
TCGACGTGTACGAGGCGCGGCTGTCGAGCTCGCCGTACCTCGCCGGGGACTTCTTCAGCCTCGCCGACCTCGTCCACTTC
GGCTTCACCTACTGCCTGGTGGCCGGCACCGAGTACGCGACGCTGCTGGAGTCGCGCGCGAGCGTCATGGCGTGGTGGGG
GCGCATCATGGCCAGGCCCTCGGTGAAGAAAGTGGCCCCGCTCATCCACCTCGGATTGAAGCTATCCTCGTCTGCTTAAA
TTGAATGTCGCAAATTCAGTTTATATATGCATTTCAGTTGGGTTTTACTACTATGATTTTTGATGTCTAGAGACATGTTG
AGAAATAAATGTTTGTTCG------TAAGTAGTACTTCCTACGTAAAAAAATAT--------------------------
ATATAAGCGTATGGATCACTTAGTGATCTAAACGCTCGTATATTTCTTTGTGGAAGGAGTACTACATATAAATAAGACTA
GAAGGAAAAATGAGATGCACTAAACTCATCATCGAATCTGATGGTATGATGGCGCTGGAGGCTACCTATCAT-CCAATGC
TTATATTCGGACTGATGTTTCACTCATTACAAGTCATGGAGTTTGTTTTCAAAAGAAAAAAGTCATGGAGTTTGCTAGCA
TCAGTCTTGTCCACTATAGCAGGGAAGCAAATATGGTAGTTGATTTGCT-------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------TGGCAAAACACTGTTTTAGCATTAA
CGAGTCTGAATCTTGAAAATCCAACATCC-----------CTTCATCAGTATGTAAACGACCTAACTATTATTTGATGGA
TAAAATTGTTATGAACAAAACTATATATAAATAAGACTAGGAAAAGAGGTTGTGCGTTGCAACGGAAGAATTAAAAACAC
ATCCC---AACCATGATTCAAGACCCCAACATGTCAACTTCCTTTATTTCAACATGACATGCCATTTGTGCTGCCACTTA
TCCTTCTTTCCACCCTCGCCGACGGTGGCCTCAATGCTTACACAATCATAATGTGTTTGAATGTAGTCAACTCTAAGGCA
TCTCTT--GGCATAAAATGGGAAATCTACTTTGTTTTCCACCCCCGCGAAGTTTTGCCGAGGCATGCATGTGTGGCCATA
GATGATTTCTTTCGTTCCAATCCCATTAGGTCCATGTCTTTTATATCAACATGATGTCCCATCTTTGTTGCCACTTATTT
TCCTTTCCGCCCTCACGACGGTGGCCTTAGTGCTAACACAGTCCCAACGTGTTTGAATGTGGGCAACCCTAAGATTGGTC
TCTCTCTGTATGTG------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>chr1D_484
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TATATATGAAGTCGCAATTCCTTTGGCAGGAAGGAAGCTCGAATTATGAAACAAGTCAAGAACAAAAAGAAAATTTC
GCTAGTTAGACCATAACCACACCAAATCTTCCCAGCGACCAGGCCATGAGAAGAGTATAGTATATCTACACCATTTGGAG
TGAAAAAAGCAAATCCCGTCGAGGACTACTATTTGGTTATATTATGGACAAAGTCGTAATTCCTTGGGCGTGAAGGAAGC
TCGATTCATGAATCAAGTCAAAGACAATAAGAAATTATCACTTGGTTGACCATAACCACACCAAATCTTGTTGAGATCAG
ATCAC---AAAAATGGTATAGTAGAGTCTGTACTATTTTCTGGTATTATCTTCCTTGCAATCACGCCGATCACATGTAAT
ATAAGTCGGGTTGGTCAAGGTCTGCTTAAGCATGCACTAATCAGCACTAAAAAGTAAAAACAGAGCTGCTTAATTGAAGC
TCTCTCTCTCTGTGTGTATC--AGAGAGAAGCTGTGTGGGTGTGTGAGAGGGAGAGAGAGATGGGCGGTGCCGTGAAGGT
GTACGGGGTGGCGGCGTCGCCGTTCGTCGCGACGGTGCTGCTGTGCCTGGAGGAGGTCGGCGCCGACTACGAGCTCCTCC
CCCTCGACATGGCTGCGCGGGAGCAGAGGACCGAGCCCTACCTCTCTCGGAACGTATGTAGAAACAGAGACA--------
-----------------------------------------------GTTTATACTTTGA-TTGAGTATGTTTCTATCTC
GCTCCATTTTTTTATGCAAG--TCTTCA-TACGGTTCAATCTCGCAGCCTTTCGGCAAGATCCCAGCGTTGGAGGACGGG
GAGCTGACTCTCTTCGGTAATGAAATTCACACACTGA-TCACGAATCAATCCAT---AGCAT------------------
---ACAAACTCTGATTAGA-T------------TTTCAATTGATCCACACACCGGTAATAT--GATCTCAGAATCGCGCG
CGATTTCTCGGTACGTGCTCCGCAAGTTCGG------AGGCGCCAGCG---CCACCGATCTTCTAGGAGAATCCAGCCTC
GAGGAATCAGCCATGGTGGACGTGTGGATGGAGGTGGAGGCCCACCAGTACCAGCCGGCCATCGCCAACGTCGTCCGGCA
GTGCATCATCCTGCCGTTCATCGGCGGCGCGCGCGACCAGGCCGTCGTCGACGAGTACGTCGGGAAGCTGGAGAAGGTCC
TCAACGTGTACGAGGCGCGGCTGTCGAGCTCACCGTACCTCGCCGGGGACTTCTTCAGCCTCGCCGACCTCGTCCACTTC
GGCTTCACCTACTGCCTGGTGGCCGGCACCGAGTACGGGGCTCTGCTGGAGTCGCGCGCGAGCGTCCTGGCGTGGTGGGG
GCGGATCATGACCAGACCCTCGGTGAAGAAGGTGGCGCCGCTAATCCACCTCGGACTGAAGCTATCTTCGTCAGCTTAAA
TTGAATATCGTACATTCAGTTTATATATGCATTTCAGTTGGGTTTTACTACTATTATTTTTCATGTCTAG-GACACGTTG
AGAAATAAATGTGTGTTCC------TAAGTAGTACTCCCTATTTAAAGAAAAAT--------------------------
ATATAAACGCTTT-------------------------TATATTTTTTTGTGGAGGAAGTACTACATATAAATAAGACCA
GCGAAAAAAATGAGGTGCACTAAACTCATCGTCGAGTCTGGCAGTATGATGGCGTTGGATGCTATCTCTCATCCAAATGC
TTA-ATTCGGACTGATGTTTCAATCATTACAAGCCATGGAGTTTG-----------------------------------
--------------------------------------------------------------------------------
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---------------
>chr1A_680
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TA---TGGACAAAGTCACAATTCCTTGGGCAGGGAGGAAGC
TCGATTCATCAACCAATTCAAGGACAAAAGGAAATTATCACTCGGTTGACCATAACCACACCAAATCTTCCCAAGACCAG
ATCAC---GAAAATTGTATAGTACCGTCTACACTATTTGGTTATATTATCTTCCTCTCAATCACTCCCATCACATGTACT
ATAAGTTATGCTGGTCAAGGTCTGCTTAAGCACGCACTAATTA------------AAAAACAGAGCTGCTTAATTACAGC
TCTGT------GTGTGAGAGAAAGAGGGAAGCTGCGTGGGTGAGTGAGAGGGAGAGAGAGATGGGCGGTGCCGTGAAGGT
GTACGGGGTGGCGGCGTCTCCGTTCGTCGCGACGGTGCTGCTGTGCCTGGAGGAGGTCGGCGCCGACTACGAGCTCCTCC
CCCTCGACATGGCTGCGCGGGAGCAGAGGACCGAGCCCTACCTCTCTCGGAACGTATGTAGAAAGAGAGACA--------
-----------------------------------------------GTTTATAATTTGATTTGAGTATGTTTCTATCTC
GCTCCATTTTCGTATGCAAG--TTTTCA-TACGATTCAATCTCGCAGCCTTTCGGCAAGATCCCGGCGTTGGAGGACGGG
GAGCTGACTATATTCGGTA-TGAAATTCACATACTCGCTCACGAACCAATTCATAGCAGCAT------------------
---ACAAACTGTAATTAGA-T------------TTTCAATTGATCCACACACTGGTGATAT--TACCTCAGAATCGCGCG
CGATTTCTCGGTACGTGCTCCGCAAGTACGG------AGGCACCGGCG---CCACCGATCTCCTACGGGCATCCAGCCTC
GAGGAATCGGCCATGGTGGACGTGTGGATGGAGGTGGAGGCCCACCAGTACCAGCCGGCCATAGCCAACATCGTCCGGCA
GTGCGTCATCCTGCCGTTCATCGGCGGCGCGCGAGACCAGGCCGTCGTCGACGAGTACGTCGGGAAGCTGGAGAAGGTCC
TCGACGTGTACGAGGCGCGGCTGTCCAGCTCGCCGTACCTCGCCGGGGACTTCTTCAGCCTCGCCGACCTCGTCCACTTC
GGCTTCGCCTACTGCCTCGTGGCCGGCACCGAGTACGCGACGCTGCTGGAATCGCGCGCGAGCGTCATGGCGTGGTGGGG
GCGGATCATGACCAGGCCGGCGGTGAGGAAGGTGGCGCCGCTAATCCACCTCGGACTGAAGCTATCTTCGCCAGCATAAG
TTGAATACCGTGAATTCAGTTTATATATGTATTTCAATTGGGTTTTATTA------TTTTTCATGTCTAGGGACACGTTG
AGAAATAAATGTTTGTTCATATATATAAGTAGTACTTCCTACGGAAAAAACATAAAAACATTTAGATCACTATTTTAATA
ATATAAAGGCTTT-------------------------TATATTTCTTTATGGAGAGAGTGCTACATATAAATAAGACTA
GCAAAAAAAGTGAGGTGCACTAAACTCATCATCGAGTCTGACAGTATAATGGCGTTGGAGGCTATCTCTCATCCCAATGC
TTATATTCGAACTGATGTTTCAATCATTACAAGCCATGGAGTT------------------------------GCTAGTA
TCAGTCTTGTCCACT--AGCAGAGAAGCAAATATTGCCGAAAAAGAATTTCCTCCACGTTTTATATTATAAATCAAACAT
CACCACATATCTTAGCGAGCTGAATAAACACACACCATCATGACACACATCGAACACATCCAAGTCTAGATACAAAGGTG
CCGAGCACCATCACATCACTCGGACACAACCAAGCAAACATAATATGAGCTACGACGAACCACTTGGAGCCACCGAGGGG
GTGAGATGGACATGACGAAGCAAGGACTCCAAGACGGTGCCTCCCAGAAGGGCACGACCACGGATAGCCGCCACCGTCCG
ATCCGCAGATCAAGTTTTCACCCGGAGCAACGCAGGGGGTGGGAGCACCACGACGGAACCTTCAAGAAGGATACGACGTC
CACGGACGCCGCCACCGACGGCCAGAAACTGGGCAAGTGATGAACCCCGGTGCTTGCACCCCGCCGACACACCCTTGCTC
CGCCAACCACCCACAGCCACGTCCCCCCGCAAAACCATGGCTGCCCGCCCGCACCTGGGACGCAGGTTCAGCCCACGAAC
GCCACGCCTCCCGTCGCCAGGGCCGCCGCCCAACATCTATACACCCCCAAAACCATCCAAAGAGATCAACTTTGCGCCAA
AAGAACACCACTGACCGACGAATCGCAACATACATCCTGCCTTGAACATCACCAGAGCTGCGACGGCCAACACGCGGCCG
GGGAAAGGGGCGGACGCATCCGGACCGGCACACCCCTGTGCCAGTGACGGGGGCCCAAGCACGTCGGCGCCGCCCATCCC
TCCAGCCAGCCTCCCCATCGGACACACCCCTGTGCCACCCCACCTCGGCGGCCGACACAGCACGACGCAAGGCCACCGAC
GCAGACCCGACCACCGACAAGGGGGACCCCAAGCATAGCCGCTGAACGCCAAGAATACTCACCGGGAAGCCCATCTGCCC
TGTCGTCGTCGTCCAGCCAGCGGGACGACTGGATCCCGACCAGCACGCCCACCAGCCACCGCCGCTGCGCCTCCACCACC
ACCAGCCGAGGCCACGGTAGGGGCGGACGCCCGCAGCCCACGCTATCCACGGCCCTCGCCGGCAGGGCCCAGATCTGGCC
AAACGCCGCCGTCGGAGCCCTCCGCGCACCACCTCCGCTGCAGCCCCTTTACGCCGCCGCCCACAACCCGCGGCGCCGCC
GCCAGCTGCCGCCGCCACGCCGCCGCGCCCCGAGCGGATATAAGAGCTGACTGCCTGGCAAAACACTATTTTTGCATTAA
TAAGTTTGAATCTTGGAAATCAAATATCCTTGACTTTATTCTCCATCGGTATGTAAATGACCTTGCTATTATTTGATTAA
CAAAATTGTTATGATCAAAACTATATATAATTAAGACTAGCAAAAGAGTTCATGCGTTATAACGGAAAAAGAGTGTCCCT
AATCCAATAACCATGATTCAAGACCCCAATAGATCAACTTTCATTATTTCAACATGACATGCCATTTGTGTTGCCGCTTA
TCCTTCTTTCCACCTTCGTCGACGGTGGCCTCAATGCTCACACAGTCATAATGTGTTTGAATGTAATCAATCCTAAGACA
TCTCTCTCGGCATAAGATGAGAAATCTGCTTTGTTTTTCACCCCGCGAGGTTTTGCT-GAGGCATGCATGTGTGGCCATA
GATGATTTCTTTCGTTCTAATCTCAGTAGGTCCACGTATTTTATATTAACATGACATCCCATC-----------------
--CTTTCCACCCTCGCGACGATGACCTTAGTGCTAACACAGTCACAACGTGTTTGAATATGGGCAATCCTAAGGTCTCTC
TCTCTCTCTCTNNNNNNNNNNCATAACTGAAGACCCCAATAGTTTCACGTCATTTATTTTAACATGACATCTCATATGTG
TTGTCACTTATCCTTCTTTCCACCCTCGCCGACGGTGACCTCAGTGCTCACATAGTCACAACATGTTTGAATGTGGTCAA
TCCTAAGACGTCTCT
>chr1B_986
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------GAGAGAGAGAGAGAGATGGGCGGTGCCGTGAAGGT
GTACGGGGTGGGGGCGTCTCCGTTCGTGGCGACGGTGCTGTTGTGCCTGGAGGAGACGGGCGCAGACTACGAGCTCGTCC
CCCTCGACATGGCGGCGCGTGAGCAGAGGACCGAGCCCCACCTCTCCCGAAACGTACGTCGGTTCTGCTGAGCTCTACCA
TCAACCACAGCACTCCACCTTCTACTTTTT-------CGTGACAAGTGTTATTACTCAGG-TGCTCTAATTTTCTATCTC
ATTCCAT---------------TTTCTTGTATGCTTCAATCTTGCAGCCTTTCGGGAAGATCCCAGTGTTAGAGGACGGA
GAGCTGACTCTCTTCGGTA-TGAAATTCTCACGCTCA-TCACAAATCAGACCAT---AGCATCTTAATCAAAACCTCACT
TTTACAAACGATGATTAGA-TTTTCTTTTGCCCTATCAATTAATCCGCACGTCGGTAATAC--GATCTCAGAATCGCGCG
CGATTTCTCGGTACGTGCTCCGCGAGTACGG------AGGCACCAGCG---CGACCGATCTTCCAAGGGAATCCAGCCTC
GAAGAATCAGCCATGGTGGACGTGTGGACGGAGGTGGAGGCCCACCAGTACCAGCCGGCCATCGAACACATCGTCCAGCA
GTGCGTCATCCTGCCGTTCATCGGCGGCGCGCGCGACCAGGCCGTCGTCGACGAGAACGTCGGCAAGCTGGAGAAGGTCC
TCGACGTGTATGAGGCGCGGCTGTCGACGCACGCGTACCTTGCCGGAGACTTCTTCAGCCTCGCCGACCTCCTCCACTTC
GGTATCACCTACTACCTGGTGGCCGGCATCGAGTACGCGACGCTGCTGGAGTCGCGCGCGAACGTCAGTGCGTGGTGGGG
GCGGATCATGGCCAGGCCGTCGGTGAAGAAGGTGGCGCCGTTAATCCACCTCTGGTTGAAGCCGTCTTCGTCTGCTTAAA
TT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------
>chr1D_986
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------GAGAGAGAGAGAGAGATGGGCGGTGCCGTGAAGGT
GTACGGGGTGGGGGCGTCTCCGTTCGTGGCGACGGTGCTGTTGTGCCTGGAGGAGACGGGCGCAGACTACGAGCTCGTCC
CCCTCGACATGGCGGCGCGAGAGCAGAGGACTGAGCACCACCTCTCCCGAAACGTACGTTGGTTCTCCTGAGCTCAACCA
TCAACCACAGCACCCTACCTTCTTAATCCCATTTTCCCGTGAGAAGTGTTATTAGTCAGG-CGCTCTAATCTTCTATCTC
ATTCCATTTTCTTATGTAAG--TTTCTTGTATGCTTCAATCTTGCAGCCTTTCGGCAAGATCCCAGTGTTGGAGGACGGA
GAGCTGACACTCTTCGGTA-TGATATTCACACGCTCA-GCACAAATCAGACCAT---AGCATCAAGT-------------
-----AAACGATGATTAAA-TTTTCTTTTGCCTTATCGATTAATCCGCACACCGGTAATATATGATCTCAGAATCGCGCG
CGATTTCTCGGTACGTGCTCCGCAAGTACGCATCGCCAGGAACCAAGG---CCACCGATCTCCTAGGAGAATCCAGCGTC
GAGGAATCAGCCATGGTGGACGTGTGGACGGAGGTGGAGGCCCACCAGTACCAGCCGGCCATCGAACACATCGTCCAGCA
GTGCGTCATCCTGCCGTTCATCGGCGGCTCGCGAGACCAGGTCGTCGTCGACGAGAGCGTCGGGAAGCTGGAGAAGGTCC
TCGACGTGTACGAGGCGCGGCTGTGGACGCACGCATACCTCGCTGGAGATTTCTTCAGCCTCGCCGACCTCGTCCACTTC
GGTATTACCTACTACCTGGTGGCCGGCACCGAGTACGCGACGCTGCTGGAGTCGCGCGCGAACGTGTGGGCGTGGTGGGG
GCGGATCATGGCCAGGCCGTCGGTGAAGAAGGTGGCGCCGTTAATCCACCTCTGGTTGAAGCCGTCTTCGTCTGCTTAAA
TT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>chr1A_986
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------GAGAGAGAGCCAGACATGGGCGGTGCCGTGAAGGT
GTACGGGGTGGGGGCGTCTCCGTTCGTGGCGACGGTGCTCTTGTGCCTGGAGGAGACGGGCGCAGACTACGAGCTCGTCC
CCCTCGACATGGCGGCGCGTGAGCAGAGGGCCGAGCCACACCTCTCCCGAAACGTACGTCGGTTCTGCTGAGCTCAACCA
TCAACCACAGCACTCTACCTTCTTAATCCCATTTTCCCGTGACAAGTGTTATTAGTCAGG-TGCTCTAATCTTCTATCTC
ATTCCATTTTTCCATGTTAAGTTTTCTTGTATGCTTCAATCTTGCAGCCTTTCGGGAAGATCCCAGTGTTAGAGGACGGA
GAGCTGACTCTCTTCGGTA-TGAAATTCTCACGCTCA-TCACAAATCAGACCAT---AGCATCTTAATCAAAACCTCACT
TTTACAAAAGATGATTAGATTTTTCTTTTGCCCTATCAATTAATCCGCACGTCGGTAATAC--GATCTCAGAATCGCGCG
CGATTTCTCGGTACGTGCTCCGCAAGTACGG------AGGCACCAACCCCACCACCGATCTTCTAAGGGAATCCAGCCTC
GAGGAATCAGCCATGGTGGACGTGTGGACGGAGGTGGAGGCCCACCAGTACCAGCCGGCCATCGAACACATCGTCCAGCA
GTGCGTCATCCTGCCGTTCATCGGCGGCGCGCGAGACCAGGCCGTTGTCGACGAGAACGTGGGGAAGCTGGAGAAGGTCC
TGGACGTGTATGAGGCGCGGCTGTCGACGCACGCGTACCTCGCCGGAGATTTCTTCAGCCTCGCCGACCTCGTCCACTTC
GGTATCACCTACTACCTGGTGGCCGGAACCGAGTACGCCACGTTGCTGGAGTCGCGCGCGAACGTGTGGGCGTGGTGGGG
GCGGATCATGGCCAGGCCGTCGGTCAAGAAGGTGGCGCCGTTAATCCACCTCTGGTTGAAGCCATCTTCGTCTGCTTAAG
TTCAATATCGTAAATTC---------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS-------------S--S------S----------------------------------------S---------S--
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S--------------------S------------------------
----SSSS--S-S-S---S-----------------S--------S----------------------------S---SS
-------------------------------------S------------------------------------------
------------------------------------------------------S-------------------------
------------------------------------------S-------------------------------------
----------------------S----------------------------------SS-----------S---------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
---S------------------------------S------S--------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
---------------------------------------------------S-----------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S--------------------------S-----S-----S-----------------------S-------------
------S---S-------------------------------------------S------S--------S----S----
------------------S--------------------------------S----------------------------
------S--SS-SSSSSSSSSSSSSSSSSSSSSSSSSS----------------S-------------------------
-S-SS---------S--------------------S-----SS-----------S---------S--S------------
----------------------S----------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-
---------------SS-----S-----------S-SS-SSS-SSSSS--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S----S-------
SS---S---------S-----S--S-----------------S----S---------S-----SS------------SS-
S-------------S---------------S---------S-------S-SS------SS-------S--SSSSSSS-SS
-SS--------------------------S-SS-------S-S---------------------------S----S----
--------------S---S-------------------S-----S--------------------S----SS-----S--
-----S---------S---S-------S---------S------SSSSSSS---SSSS----------------------
-----------------S----S--S--------S--S--------S-------SS-------SSSSSSSSSSSSSSSSS
SS------S-----S-----S--S-------------------S--------------S-------S------S-SSS--
-------S-S-SSS------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>forward_303
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GAGGAGCTAGGGATTTGGGC-----------------
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---------------
>reverse_2283
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------GGTATGATGGCGCTGGAGG-------------------
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---------------
