Multiple sequence alignment - TraesCS1B01G097400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G097400 chr1B 100.000 3032 0 0 1 3032 101592796 101589765 0.000000e+00 5600.0
1 TraesCS1B01G097400 chr1B 93.030 703 42 2 1504 2206 101519653 101520348 0.000000e+00 1020.0
2 TraesCS1B01G097400 chr1B 90.018 571 22 11 637 1199 101518901 101519444 0.000000e+00 706.0
3 TraesCS1B01G097400 chr1B 86.879 282 22 10 2368 2637 101522519 101522797 4.910000e-78 302.0
4 TraesCS1B01G097400 chr1B 88.636 132 12 2 1284 1415 101519437 101519565 1.130000e-34 158.0
5 TraesCS1B01G097400 chr1B 95.294 85 4 0 1203 1287 655133144 655133228 5.270000e-28 135.0
6 TraesCS1B01G097400 chr1D 85.769 1314 98 30 1288 2578 63543780 63545027 0.000000e+00 1308.0
7 TraesCS1B01G097400 chr1D 89.619 578 34 12 637 1198 63543213 63543780 0.000000e+00 712.0
8 TraesCS1B01G097400 chr1D 84.832 567 84 2 1 566 307335807 307335242 1.220000e-158 569.0
9 TraesCS1B01G097400 chr1D 83.670 594 95 2 1 593 208082911 208083503 2.640000e-155 558.0
10 TraesCS1B01G097400 chr1A 90.323 713 40 10 1506 2206 61576287 61576982 0.000000e+00 907.0
11 TraesCS1B01G097400 chr1A 85.998 857 73 13 1504 2360 61714139 61714948 0.000000e+00 874.0
12 TraesCS1B01G097400 chr1A 90.625 576 29 13 637 1199 61575481 61576044 0.000000e+00 741.0
13 TraesCS1B01G097400 chr1A 82.708 480 53 22 733 1199 61713409 61713871 1.690000e-107 399.0
14 TraesCS1B01G097400 chr1A 90.385 208 18 2 1286 1493 61576039 61576244 3.850000e-69 272.0
15 TraesCS1B01G097400 chr1A 85.915 213 14 9 1298 1494 61713878 61714090 2.370000e-51 213.0
16 TraesCS1B01G097400 chr1A 95.238 84 4 0 1202 1285 12738237 12738320 1.900000e-27 134.0
17 TraesCS1B01G097400 chr3D 86.464 591 78 2 46 636 254096702 254097290 0.000000e+00 647.0
18 TraesCS1B01G097400 chr3D 95.238 84 4 0 1202 1285 11315809 11315892 1.900000e-27 134.0
19 TraesCS1B01G097400 chr7D 84.591 636 97 1 1 636 156098394 156097760 5.520000e-177 630.0
20 TraesCS1B01G097400 chr7D 84.640 625 93 3 1 625 365975036 365975657 1.190000e-173 619.0
21 TraesCS1B01G097400 chr7D 97.619 84 2 0 1202 1285 471323236 471323319 8.760000e-31 145.0
22 TraesCS1B01G097400 chr5D 84.768 604 78 9 1 597 424883443 424882847 7.240000e-166 593.0
23 TraesCS1B01G097400 chr5D 82.160 639 104 5 1 639 407925776 407925148 9.560000e-150 540.0
24 TraesCS1B01G097400 chr5D 79.233 443 70 19 1569 1997 480154987 480154553 3.820000e-74 289.0
25 TraesCS1B01G097400 chr5D 86.335 161 22 0 1001 1161 493833640 493833800 3.110000e-40 176.0
26 TraesCS1B01G097400 chr5D 97.590 83 2 0 1203 1285 542931489 542931407 3.150000e-30 143.0
27 TraesCS1B01G097400 chr5A 82.390 636 105 6 3 636 448527747 448527117 5.720000e-152 547.0
28 TraesCS1B01G097400 chr5A 79.186 442 72 17 1569 1997 598637742 598637308 3.820000e-74 289.0
29 TraesCS1B01G097400 chr5A 86.667 165 22 0 1001 1165 616878691 616878855 1.860000e-42 183.0
30 TraesCS1B01G097400 chr3B 82.459 610 100 5 1 606 440682266 440682872 7.450000e-146 527.0
31 TraesCS1B01G097400 chr5B 79.167 432 68 19 1569 1986 588156413 588155990 2.300000e-71 279.0
32 TraesCS1B01G097400 chr2D 85.185 243 27 7 937 1178 597939475 597939709 1.090000e-59 241.0
33 TraesCS1B01G097400 chr2D 85.185 243 27 7 937 1178 641960740 641960974 1.090000e-59 241.0
34 TraesCS1B01G097400 chr2D 95.238 84 4 0 1202 1285 576279017 576279100 1.900000e-27 134.0
35 TraesCS1B01G097400 chr6D 89.305 187 16 1 997 1179 6982170 6982356 6.540000e-57 231.0
36 TraesCS1B01G097400 chr6D 96.429 84 3 0 1202 1285 465192464 465192547 4.080000e-29 139.0
37 TraesCS1B01G097400 chr6D 85.938 64 6 2 2230 2291 6983566 6983628 7.020000e-07 65.8
38 TraesCS1B01G097400 chr4A 96.552 87 2 1 1202 1288 705429594 705429679 3.150000e-30 143.0
39 TraesCS1B01G097400 chr6A 93.478 92 3 1 1197 1285 394619820 394619729 1.900000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G097400 chr1B 101589765 101592796 3031 True 5600.000000 5600 100.000000 1 3032 1 chr1B.!!$R1 3031
1 TraesCS1B01G097400 chr1B 101518901 101522797 3896 False 546.500000 1020 89.640750 637 2637 4 chr1B.!!$F2 2000
2 TraesCS1B01G097400 chr1D 63543213 63545027 1814 False 1010.000000 1308 87.694000 637 2578 2 chr1D.!!$F2 1941
3 TraesCS1B01G097400 chr1D 307335242 307335807 565 True 569.000000 569 84.832000 1 566 1 chr1D.!!$R1 565
4 TraesCS1B01G097400 chr1D 208082911 208083503 592 False 558.000000 558 83.670000 1 593 1 chr1D.!!$F1 592
5 TraesCS1B01G097400 chr1A 61575481 61576982 1501 False 640.000000 907 90.444333 637 2206 3 chr1A.!!$F2 1569
6 TraesCS1B01G097400 chr1A 61713409 61714948 1539 False 495.333333 874 84.873667 733 2360 3 chr1A.!!$F3 1627
7 TraesCS1B01G097400 chr3D 254096702 254097290 588 False 647.000000 647 86.464000 46 636 1 chr3D.!!$F2 590
8 TraesCS1B01G097400 chr7D 156097760 156098394 634 True 630.000000 630 84.591000 1 636 1 chr7D.!!$R1 635
9 TraesCS1B01G097400 chr7D 365975036 365975657 621 False 619.000000 619 84.640000 1 625 1 chr7D.!!$F1 624
10 TraesCS1B01G097400 chr5D 424882847 424883443 596 True 593.000000 593 84.768000 1 597 1 chr5D.!!$R2 596
11 TraesCS1B01G097400 chr5D 407925148 407925776 628 True 540.000000 540 82.160000 1 639 1 chr5D.!!$R1 638
12 TraesCS1B01G097400 chr5A 448527117 448527747 630 True 547.000000 547 82.390000 3 636 1 chr5A.!!$R1 633
13 TraesCS1B01G097400 chr3B 440682266 440682872 606 False 527.000000 527 82.459000 1 606 1 chr3B.!!$F1 605

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
976 1031 0.097325 CACTCTCTCGCGTGTACTCC 59.903 60.0 5.77 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2848 5091 0.109272 TCGATTGTCTGAGCCGACAC 60.109 55.0 1.08 0.0 43.11 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.285863 TGTGAAAGAAAAACCCATCACCT 58.714 39.130 0.00 0.00 37.07 4.00
34 35 3.668821 ACCCATCACCTCTATCCATTGA 58.331 45.455 0.00 0.00 0.00 2.57
65 66 3.583276 ATCCGTCGAACGCCTTGCA 62.583 57.895 0.00 0.00 40.91 4.08
100 101 4.530857 GCCGGATAGTGCACGCCT 62.531 66.667 12.01 0.00 0.00 5.52
242 243 1.228124 CTCTCCCACCGGCAACAAA 60.228 57.895 0.00 0.00 0.00 2.83
248 249 1.247567 CCACCGGCAACAAAGAGAAT 58.752 50.000 0.00 0.00 0.00 2.40
320 325 4.643387 GTGCTGGTTGGGACGGCT 62.643 66.667 0.00 0.00 0.00 5.52
329 334 2.111999 TTGGGACGGCTCTTGTGGAG 62.112 60.000 0.00 0.00 44.49 3.86
341 346 3.681835 GTGGAGGACGACGTGGCT 61.682 66.667 4.58 0.00 0.00 4.75
342 347 2.915659 TGGAGGACGACGTGGCTT 60.916 61.111 4.58 0.00 0.00 4.35
400 409 5.427157 GGAGGGAGGTAGAAGAAGAGAAAAT 59.573 44.000 0.00 0.00 0.00 1.82
484 493 2.745884 TGTCCATTCGGCCGCAAG 60.746 61.111 23.51 6.67 0.00 4.01
509 519 0.397254 TTCAAACTTGGGCCGGGAAA 60.397 50.000 2.18 0.00 0.00 3.13
510 520 0.397254 TCAAACTTGGGCCGGGAAAA 60.397 50.000 2.18 0.00 0.00 2.29
535 545 1.600485 GAAAGCGGACAGAAAACGGAA 59.400 47.619 0.00 0.00 0.00 4.30
562 572 2.279985 TTTACGGCCGCGTGTTGA 60.280 55.556 28.58 0.00 0.00 3.18
566 576 2.696409 TACGGCCGCGTGTTGAAAGA 62.696 55.000 28.58 0.00 0.00 2.52
568 578 2.539338 GGCCGCGTGTTGAAAGACA 61.539 57.895 4.92 0.00 0.00 3.41
587 597 5.079643 AGACATGCTTTGTTCATTTACCCT 58.920 37.500 0.00 0.00 39.18 4.34
602 612 1.149101 ACCCTCAAATGGACACTGGT 58.851 50.000 0.00 0.00 0.00 4.00
606 616 2.291153 CCTCAAATGGACACTGGTGGAT 60.291 50.000 5.70 0.00 34.19 3.41
626 636 2.050714 GACGAGGTCGCGTGTTGA 60.051 61.111 5.77 0.00 45.72 3.18
639 649 1.403679 CGTGTTGAAGTTGGCCTGAAA 59.596 47.619 3.32 0.00 0.00 2.69
640 650 2.034558 CGTGTTGAAGTTGGCCTGAAAT 59.965 45.455 3.32 0.00 0.00 2.17
656 669 5.568223 GCCTGAAATGAAAAGAAGGCTGATT 60.568 40.000 4.28 0.00 45.42 2.57
696 718 2.832733 GGTAGCTCCGCCCTATAAATCT 59.167 50.000 0.00 0.00 0.00 2.40
728 750 4.537135 TCTAGAAACATCACGGAAAGCT 57.463 40.909 0.00 0.00 0.00 3.74
750 772 3.314331 CACCCACCTCGCTGACCT 61.314 66.667 0.00 0.00 0.00 3.85
805 827 4.250170 ACACCTCACGGTCCCCCT 62.250 66.667 0.00 0.00 43.24 4.79
832 856 1.173043 CTTCTGGAGAGCTCACGTCT 58.827 55.000 17.77 0.00 0.00 4.18
896 930 2.510382 TGCCGTATAAAATGGGGAGGAA 59.490 45.455 0.00 0.00 34.45 3.36
975 1030 1.061421 CTCACTCTCTCGCGTGTACTC 59.939 57.143 5.77 0.00 33.07 2.59
976 1031 0.097325 CACTCTCTCGCGTGTACTCC 59.903 60.000 5.77 0.00 0.00 3.85
977 1032 1.348938 CTCTCTCGCGTGTACTCCG 59.651 63.158 5.77 0.00 0.00 4.63
1092 1147 4.549516 GGCGCCGAGTACGAGGTC 62.550 72.222 12.58 4.31 42.66 3.85
1131 1186 1.302285 CATGGAGCACAAGAGCCCT 59.698 57.895 0.00 0.00 34.23 5.19
1185 1240 4.141158 ACCACTCAAATCCTCTGGTTTCTT 60.141 41.667 0.00 0.00 30.73 2.52
1199 1254 7.444183 CCTCTGGTTTCTTGTATCAACTTGTTA 59.556 37.037 0.00 0.00 0.00 2.41
1200 1255 8.149973 TCTGGTTTCTTGTATCAACTTGTTAC 57.850 34.615 3.82 3.82 0.00 2.50
1203 1258 6.017687 GGTTTCTTGTATCAACTTGTTACGGT 60.018 38.462 5.81 0.00 0.00 4.83
1204 1259 6.774354 TTCTTGTATCAACTTGTTACGGTC 57.226 37.500 5.81 0.00 0.00 4.79
1207 1262 4.562082 TGTATCAACTTGTTACGGTCCTG 58.438 43.478 5.81 0.00 0.00 3.86
1208 1263 3.764237 ATCAACTTGTTACGGTCCTGT 57.236 42.857 0.00 0.00 0.00 4.00
1209 1264 2.828877 TCAACTTGTTACGGTCCTGTG 58.171 47.619 0.00 0.00 0.00 3.66
1210 1265 1.871039 CAACTTGTTACGGTCCTGTGG 59.129 52.381 0.00 0.00 0.00 4.17
1211 1266 1.416243 ACTTGTTACGGTCCTGTGGA 58.584 50.000 0.00 0.00 0.00 4.02
1212 1267 1.764134 ACTTGTTACGGTCCTGTGGAA 59.236 47.619 0.00 0.00 31.38 3.53
1213 1268 2.171027 ACTTGTTACGGTCCTGTGGAAA 59.829 45.455 0.00 0.00 31.38 3.13
1214 1269 2.243602 TGTTACGGTCCTGTGGAAAC 57.756 50.000 0.00 0.00 31.38 2.78
1215 1270 1.764134 TGTTACGGTCCTGTGGAAACT 59.236 47.619 0.00 0.00 31.38 2.66
1216 1271 2.140717 GTTACGGTCCTGTGGAAACTG 58.859 52.381 0.00 0.00 31.38 3.16
1217 1272 1.416243 TACGGTCCTGTGGAAACTGT 58.584 50.000 0.00 0.00 36.51 3.55
1218 1273 0.106149 ACGGTCCTGTGGAAACTGTC 59.894 55.000 0.00 0.00 31.38 3.51
1228 1283 1.731720 GGAAACTGTCCAGCTAGCTG 58.268 55.000 33.58 33.58 46.97 4.24
1229 1284 1.082690 GAAACTGTCCAGCTAGCTGC 58.917 55.000 34.82 23.82 42.35 5.25
1243 1298 5.686159 GCTAGCTGCTGATGATTGTAATT 57.314 39.130 13.43 0.00 38.95 1.40
1244 1299 5.687828 GCTAGCTGCTGATGATTGTAATTC 58.312 41.667 13.43 0.00 38.95 2.17
1245 1300 5.469421 GCTAGCTGCTGATGATTGTAATTCT 59.531 40.000 13.43 0.00 38.95 2.40
1246 1301 6.648310 GCTAGCTGCTGATGATTGTAATTCTA 59.352 38.462 13.43 0.00 38.95 2.10
1247 1302 7.333921 GCTAGCTGCTGATGATTGTAATTCTAT 59.666 37.037 13.43 0.00 38.95 1.98
1248 1303 7.436430 AGCTGCTGATGATTGTAATTCTATG 57.564 36.000 0.00 0.00 0.00 2.23
1249 1304 7.222161 AGCTGCTGATGATTGTAATTCTATGA 58.778 34.615 0.00 0.00 0.00 2.15
1250 1305 7.388224 AGCTGCTGATGATTGTAATTCTATGAG 59.612 37.037 0.00 0.00 0.00 2.90
1251 1306 7.172875 GCTGCTGATGATTGTAATTCTATGAGT 59.827 37.037 0.00 0.00 0.00 3.41
1252 1307 8.969260 TGCTGATGATTGTAATTCTATGAGTT 57.031 30.769 0.00 0.00 0.00 3.01
1253 1308 8.833493 TGCTGATGATTGTAATTCTATGAGTTG 58.167 33.333 0.00 0.00 0.00 3.16
1254 1309 9.049523 GCTGATGATTGTAATTCTATGAGTTGA 57.950 33.333 0.00 0.00 0.00 3.18
1273 1328 9.431887 TGAGTTGAGTAATACAAGTTATTCACC 57.568 33.333 0.00 0.00 32.31 4.02
1274 1329 8.788325 AGTTGAGTAATACAAGTTATTCACCC 57.212 34.615 0.00 0.00 32.31 4.61
1275 1330 7.548075 AGTTGAGTAATACAAGTTATTCACCCG 59.452 37.037 0.00 0.00 32.31 5.28
1276 1331 5.813672 TGAGTAATACAAGTTATTCACCCGC 59.186 40.000 0.00 0.00 28.99 6.13
1277 1332 5.736813 AGTAATACAAGTTATTCACCCGCA 58.263 37.500 0.00 0.00 0.00 5.69
1278 1333 6.174760 AGTAATACAAGTTATTCACCCGCAA 58.825 36.000 0.00 0.00 0.00 4.85
1279 1334 5.968528 AATACAAGTTATTCACCCGCAAA 57.031 34.783 0.00 0.00 0.00 3.68
1280 1335 5.968528 ATACAAGTTATTCACCCGCAAAA 57.031 34.783 0.00 0.00 0.00 2.44
1281 1336 4.237349 ACAAGTTATTCACCCGCAAAAG 57.763 40.909 0.00 0.00 0.00 2.27
1282 1337 3.886505 ACAAGTTATTCACCCGCAAAAGA 59.113 39.130 0.00 0.00 0.00 2.52
1283 1338 4.339814 ACAAGTTATTCACCCGCAAAAGAA 59.660 37.500 0.00 0.00 0.00 2.52
1284 1339 5.163499 ACAAGTTATTCACCCGCAAAAGAAA 60.163 36.000 0.00 0.00 0.00 2.52
1285 1340 4.866921 AGTTATTCACCCGCAAAAGAAAC 58.133 39.130 0.00 0.00 0.00 2.78
1286 1341 4.583073 AGTTATTCACCCGCAAAAGAAACT 59.417 37.500 0.00 0.00 0.00 2.66
1287 1342 5.068591 AGTTATTCACCCGCAAAAGAAACTT 59.931 36.000 0.00 0.00 0.00 2.66
1288 1343 2.861462 TCACCCGCAAAAGAAACTTG 57.139 45.000 0.00 0.00 0.00 3.16
1289 1344 2.096248 TCACCCGCAAAAGAAACTTGT 58.904 42.857 0.00 0.00 0.00 3.16
1290 1345 2.494073 TCACCCGCAAAAGAAACTTGTT 59.506 40.909 0.00 0.00 0.00 2.83
1291 1346 3.695060 TCACCCGCAAAAGAAACTTGTTA 59.305 39.130 0.00 0.00 0.00 2.41
1292 1347 3.794564 CACCCGCAAAAGAAACTTGTTAC 59.205 43.478 0.00 0.00 0.00 2.50
1449 1527 0.108585 TCGCTTGGCCTCTGTTTCTT 59.891 50.000 3.32 0.00 0.00 2.52
1457 1535 1.471684 GCCTCTGTTTCTTGGCATCTG 59.528 52.381 0.00 0.00 44.34 2.90
1498 1576 2.731451 GCGAATGCTTCCTTTTTGTTCC 59.269 45.455 0.00 0.00 38.39 3.62
1515 1637 2.501128 CGGTGGATGGATGCTCGT 59.499 61.111 0.00 0.00 0.00 4.18
1550 1672 6.917533 TCCTCTCAAATTCTCAAAAGCATTC 58.082 36.000 0.00 0.00 0.00 2.67
1619 1741 0.433492 CGCAAGTACAAGACGAACGG 59.567 55.000 0.00 0.00 0.00 4.44
1809 1931 3.810743 GCCTGGAGAAGCTCAAAAAGGTA 60.811 47.826 0.00 0.00 33.60 3.08
1959 2081 3.617735 TACCCGCACGTCAAGGCA 61.618 61.111 0.00 0.00 0.00 4.75
2068 2190 0.863799 CGCATCGTGGGATCAGATTG 59.136 55.000 0.00 0.00 31.21 2.67
2122 2255 2.609459 CGAATAAGGCAAATGAGCTCGT 59.391 45.455 9.64 5.78 34.17 4.18
2123 2256 3.544834 CGAATAAGGCAAATGAGCTCGTG 60.545 47.826 9.75 8.32 34.17 4.35
2124 2257 2.472695 TAAGGCAAATGAGCTCGTGT 57.527 45.000 9.75 0.00 34.17 4.49
2125 2258 0.877071 AAGGCAAATGAGCTCGTGTG 59.123 50.000 20.18 20.18 34.17 3.82
2126 2259 0.250467 AGGCAAATGAGCTCGTGTGT 60.250 50.000 24.03 5.77 34.17 3.72
2127 2260 0.110056 GGCAAATGAGCTCGTGTGTG 60.110 55.000 24.03 16.25 34.17 3.82
2138 2271 1.225991 CGTGTGTGTGTGTGTGTGC 60.226 57.895 0.00 0.00 0.00 4.57
2189 2326 1.355210 CTTTGCGTGTGTGTGGTCC 59.645 57.895 0.00 0.00 0.00 4.46
2199 2336 1.141053 GTGTGTGGTCCTGGAAACTCT 59.859 52.381 0.00 0.00 0.00 3.24
2200 2337 1.843851 TGTGTGGTCCTGGAAACTCTT 59.156 47.619 0.00 0.00 0.00 2.85
2201 2338 2.222027 GTGTGGTCCTGGAAACTCTTG 58.778 52.381 0.00 0.00 0.00 3.02
2202 2339 2.123589 TGTGGTCCTGGAAACTCTTGA 58.876 47.619 0.00 0.00 0.00 3.02
2203 2340 2.104792 TGTGGTCCTGGAAACTCTTGAG 59.895 50.000 0.00 0.00 0.00 3.02
2204 2341 2.368875 GTGGTCCTGGAAACTCTTGAGA 59.631 50.000 0.00 0.00 0.00 3.27
2205 2342 3.008485 GTGGTCCTGGAAACTCTTGAGAT 59.992 47.826 0.00 0.00 0.00 2.75
2206 2343 4.223032 GTGGTCCTGGAAACTCTTGAGATA 59.777 45.833 0.00 0.00 0.00 1.98
2207 2344 5.032846 TGGTCCTGGAAACTCTTGAGATAT 58.967 41.667 0.00 0.00 0.00 1.63
2208 2345 5.104776 TGGTCCTGGAAACTCTTGAGATATG 60.105 44.000 0.00 0.00 0.00 1.78
2209 2346 5.104735 GGTCCTGGAAACTCTTGAGATATGT 60.105 44.000 0.00 0.00 0.00 2.29
2210 2347 6.410540 GTCCTGGAAACTCTTGAGATATGTT 58.589 40.000 0.00 0.00 0.00 2.71
2211 2348 6.536941 GTCCTGGAAACTCTTGAGATATGTTC 59.463 42.308 0.00 0.97 0.00 3.18
2212 2349 6.213397 TCCTGGAAACTCTTGAGATATGTTCA 59.787 38.462 4.49 0.00 0.00 3.18
2213 2350 6.881065 CCTGGAAACTCTTGAGATATGTTCAA 59.119 38.462 4.49 0.74 33.76 2.69
2214 2351 7.391554 CCTGGAAACTCTTGAGATATGTTCAAA 59.608 37.037 4.49 0.00 34.41 2.69
2215 2352 8.690203 TGGAAACTCTTGAGATATGTTCAAAA 57.310 30.769 4.49 0.00 34.41 2.44
2216 2353 9.130661 TGGAAACTCTTGAGATATGTTCAAAAA 57.869 29.630 4.49 0.00 34.41 1.94
2270 4479 4.389890 TGCTTTCAGATTTGTTGCTTGT 57.610 36.364 0.00 0.00 0.00 3.16
2296 4505 8.296713 TCAAGCCTTAAATAAGATGTTTGTGTC 58.703 33.333 1.75 0.00 35.33 3.67
2297 4506 7.759489 AGCCTTAAATAAGATGTTTGTGTCA 57.241 32.000 1.75 0.00 35.33 3.58
2298 4507 8.353423 AGCCTTAAATAAGATGTTTGTGTCAT 57.647 30.769 1.75 0.00 35.33 3.06
2299 4508 8.806146 AGCCTTAAATAAGATGTTTGTGTCATT 58.194 29.630 1.75 0.00 35.33 2.57
2300 4509 8.863049 GCCTTAAATAAGATGTTTGTGTCATTG 58.137 33.333 1.75 0.00 35.33 2.82
2301 4510 9.912634 CCTTAAATAAGATGTTTGTGTCATTGT 57.087 29.630 1.75 0.00 35.33 2.71
2304 4513 8.578308 AAATAAGATGTTTGTGTCATTGTGTG 57.422 30.769 0.00 0.00 0.00 3.82
2305 4514 5.581126 AAGATGTTTGTGTCATTGTGTGT 57.419 34.783 0.00 0.00 0.00 3.72
2306 4515 4.923893 AGATGTTTGTGTCATTGTGTGTG 58.076 39.130 0.00 0.00 0.00 3.82
2352 4561 7.629652 GCATGGTTTCTAATTCCCGTATTGAAA 60.630 37.037 0.00 0.00 0.00 2.69
2394 4603 6.568869 TCCCGTATTGAAATATTTTTGCCAG 58.431 36.000 1.43 0.00 0.00 4.85
2483 4722 8.330466 TCACTTGATATTGATTAAAACACGGT 57.670 30.769 0.00 0.00 0.00 4.83
2563 4806 7.399245 AAAATATGGCGGTGTACTTACAAAT 57.601 32.000 0.00 0.00 38.04 2.32
2585 4828 9.874205 CAAATGGTAATTTGGTGTAATCAATCT 57.126 29.630 3.73 0.00 45.99 2.40
2612 4855 9.781633 ATCTATCTACTACTACACGAGTTTGAT 57.218 33.333 0.00 0.00 39.81 2.57
2613 4856 9.043079 TCTATCTACTACTACACGAGTTTGATG 57.957 37.037 0.00 0.00 39.81 3.07
2614 4857 7.860918 ATCTACTACTACACGAGTTTGATGA 57.139 36.000 0.00 0.00 39.81 2.92
2615 4858 7.677454 TCTACTACTACACGAGTTTGATGAA 57.323 36.000 0.00 0.00 39.81 2.57
2616 4859 8.277490 TCTACTACTACACGAGTTTGATGAAT 57.723 34.615 0.00 0.00 39.81 2.57
2617 4860 8.396390 TCTACTACTACACGAGTTTGATGAATC 58.604 37.037 0.00 0.00 39.81 2.52
2618 4861 6.331061 ACTACTACACGAGTTTGATGAATCC 58.669 40.000 0.00 0.00 39.81 3.01
2619 4862 5.147330 ACTACACGAGTTTGATGAATCCA 57.853 39.130 0.00 0.00 33.13 3.41
2620 4863 5.547465 ACTACACGAGTTTGATGAATCCAA 58.453 37.500 0.00 0.00 33.13 3.53
2621 4864 5.995282 ACTACACGAGTTTGATGAATCCAAA 59.005 36.000 0.00 0.00 33.13 3.28
2622 4865 5.964958 ACACGAGTTTGATGAATCCAAAT 57.035 34.783 0.00 0.00 36.14 2.32
2623 4866 5.702865 ACACGAGTTTGATGAATCCAAATG 58.297 37.500 0.00 0.00 36.14 2.32
2624 4867 5.473162 ACACGAGTTTGATGAATCCAAATGA 59.527 36.000 0.00 0.00 36.14 2.57
2625 4868 6.151648 ACACGAGTTTGATGAATCCAAATGAT 59.848 34.615 0.00 0.00 36.14 2.45
2626 4869 6.471198 CACGAGTTTGATGAATCCAAATGATG 59.529 38.462 0.00 0.00 36.14 3.07
2627 4870 5.457799 CGAGTTTGATGAATCCAAATGATGC 59.542 40.000 0.00 0.00 36.14 3.91
2628 4871 5.345702 AGTTTGATGAATCCAAATGATGCG 58.654 37.500 0.00 0.00 36.14 4.73
2629 4872 5.125900 AGTTTGATGAATCCAAATGATGCGA 59.874 36.000 0.00 0.00 36.14 5.10
2630 4873 4.823790 TGATGAATCCAAATGATGCGAG 57.176 40.909 0.00 0.00 30.63 5.03
2631 4874 3.004002 TGATGAATCCAAATGATGCGAGC 59.996 43.478 0.00 0.00 30.63 5.03
2632 4875 2.367486 TGAATCCAAATGATGCGAGCA 58.633 42.857 0.00 0.00 30.63 4.26
2633 4876 2.754002 TGAATCCAAATGATGCGAGCAA 59.246 40.909 0.57 0.00 30.63 3.91
2634 4877 3.382227 TGAATCCAAATGATGCGAGCAAT 59.618 39.130 0.57 0.00 30.63 3.56
2635 4878 3.637998 ATCCAAATGATGCGAGCAATC 57.362 42.857 0.57 1.60 30.54 2.67
2636 4879 1.331447 TCCAAATGATGCGAGCAATCG 59.669 47.619 0.57 0.00 0.00 3.34
2637 4880 1.064505 CCAAATGATGCGAGCAATCGT 59.935 47.619 0.57 0.00 35.26 3.73
2638 4881 2.106418 CAAATGATGCGAGCAATCGTG 58.894 47.619 0.57 0.00 35.26 4.35
2639 4882 0.659427 AATGATGCGAGCAATCGTGG 59.341 50.000 0.57 0.00 35.26 4.94
2640 4883 0.179076 ATGATGCGAGCAATCGTGGA 60.179 50.000 0.57 0.00 35.26 4.02
2641 4884 0.390998 TGATGCGAGCAATCGTGGAA 60.391 50.000 0.57 0.00 35.26 3.53
2642 4885 0.026803 GATGCGAGCAATCGTGGAAC 59.973 55.000 0.57 0.00 35.26 3.62
2643 4886 0.673333 ATGCGAGCAATCGTGGAACA 60.673 50.000 0.57 0.00 35.74 3.18
2659 4902 9.710979 ATCGTGGAACATATTTATAAAAACACG 57.289 29.630 19.04 19.04 44.52 4.49
2681 4924 6.744537 CACGAGTTTGAAGAATCCAAATGATC 59.255 38.462 0.00 0.00 36.14 2.92
2685 4928 8.413309 AGTTTGAAGAATCCAAATGATCTGAA 57.587 30.769 0.00 0.00 36.14 3.02
2687 4930 6.426980 TGAAGAATCCAAATGATCTGAACG 57.573 37.500 0.00 0.00 31.61 3.95
2697 4940 2.721129 GATCTGAACGATCGCAAACC 57.279 50.000 16.60 0.40 39.22 3.27
2698 4941 1.999735 GATCTGAACGATCGCAAACCA 59.000 47.619 16.60 5.26 39.22 3.67
2699 4942 1.872388 TCTGAACGATCGCAAACCAA 58.128 45.000 16.60 0.00 0.00 3.67
2700 4943 2.422597 TCTGAACGATCGCAAACCAAT 58.577 42.857 16.60 0.00 0.00 3.16
2701 4944 2.811431 TCTGAACGATCGCAAACCAATT 59.189 40.909 16.60 0.00 0.00 2.32
2702 4945 3.252215 TCTGAACGATCGCAAACCAATTT 59.748 39.130 16.60 0.00 0.00 1.82
2703 4946 4.452795 TCTGAACGATCGCAAACCAATTTA 59.547 37.500 16.60 0.00 0.00 1.40
2704 4947 5.123186 TCTGAACGATCGCAAACCAATTTAT 59.877 36.000 16.60 0.00 0.00 1.40
2705 4948 5.092105 TGAACGATCGCAAACCAATTTATG 58.908 37.500 16.60 0.00 0.00 1.90
2718 4961 4.610945 CCAATTTATGGCGATTCAAGTCC 58.389 43.478 0.00 0.00 43.80 3.85
2719 4962 4.339247 CCAATTTATGGCGATTCAAGTCCT 59.661 41.667 0.00 0.00 43.80 3.85
2720 4963 5.530915 CCAATTTATGGCGATTCAAGTCCTA 59.469 40.000 0.00 0.00 43.80 2.94
2721 4964 6.430451 CAATTTATGGCGATTCAAGTCCTAC 58.570 40.000 0.00 0.00 0.00 3.18
2722 4965 4.746535 TTATGGCGATTCAAGTCCTACA 57.253 40.909 0.00 0.00 0.00 2.74
2723 4966 3.845781 ATGGCGATTCAAGTCCTACAT 57.154 42.857 0.00 0.00 0.00 2.29
2724 4967 3.627395 TGGCGATTCAAGTCCTACATT 57.373 42.857 0.00 0.00 0.00 2.71
2725 4968 3.950397 TGGCGATTCAAGTCCTACATTT 58.050 40.909 0.00 0.00 0.00 2.32
2726 4969 3.689161 TGGCGATTCAAGTCCTACATTTG 59.311 43.478 0.00 0.00 0.00 2.32
2727 4970 3.938963 GGCGATTCAAGTCCTACATTTGA 59.061 43.478 0.00 0.00 0.00 2.69
2728 4971 4.201822 GGCGATTCAAGTCCTACATTTGAC 60.202 45.833 0.00 0.00 31.11 3.18
2729 4972 4.391830 GCGATTCAAGTCCTACATTTGACA 59.608 41.667 0.00 0.00 33.89 3.58
2730 4973 5.671329 GCGATTCAAGTCCTACATTTGACAC 60.671 44.000 0.00 0.00 33.89 3.67
2731 4974 5.639506 CGATTCAAGTCCTACATTTGACACT 59.360 40.000 0.00 0.00 33.89 3.55
2732 4975 6.401474 CGATTCAAGTCCTACATTTGACACTG 60.401 42.308 0.00 0.00 33.89 3.66
2733 4976 4.641396 TCAAGTCCTACATTTGACACTGG 58.359 43.478 0.00 0.00 33.89 4.00
2734 4977 4.346709 TCAAGTCCTACATTTGACACTGGA 59.653 41.667 0.00 0.00 33.89 3.86
2735 4978 4.543590 AGTCCTACATTTGACACTGGAG 57.456 45.455 0.00 0.00 33.89 3.86
2736 4979 3.003480 GTCCTACATTTGACACTGGAGC 58.997 50.000 0.00 0.00 0.00 4.70
2737 4980 2.906389 TCCTACATTTGACACTGGAGCT 59.094 45.455 0.00 0.00 0.00 4.09
2738 4981 3.055819 TCCTACATTTGACACTGGAGCTC 60.056 47.826 4.71 4.71 0.00 4.09
2739 4982 2.936919 ACATTTGACACTGGAGCTCA 57.063 45.000 17.19 0.61 0.00 4.26
2740 4983 3.430042 ACATTTGACACTGGAGCTCAT 57.570 42.857 17.19 0.00 0.00 2.90
2741 4984 4.558226 ACATTTGACACTGGAGCTCATA 57.442 40.909 17.19 2.65 0.00 2.15
2742 4985 5.108187 ACATTTGACACTGGAGCTCATAT 57.892 39.130 17.19 0.00 0.00 1.78
2743 4986 5.503927 ACATTTGACACTGGAGCTCATATT 58.496 37.500 17.19 0.00 0.00 1.28
2744 4987 5.948162 ACATTTGACACTGGAGCTCATATTT 59.052 36.000 17.19 0.00 0.00 1.40
2745 4988 6.435277 ACATTTGACACTGGAGCTCATATTTT 59.565 34.615 17.19 0.00 0.00 1.82
2746 4989 6.899393 TTTGACACTGGAGCTCATATTTTT 57.101 33.333 17.19 0.00 0.00 1.94
2771 5014 4.983671 AATTTATTTCAGTCCTTCCCGC 57.016 40.909 0.00 0.00 0.00 6.13
2772 5015 3.426787 TTTATTTCAGTCCTTCCCGCA 57.573 42.857 0.00 0.00 0.00 5.69
2773 5016 3.426787 TTATTTCAGTCCTTCCCGCAA 57.573 42.857 0.00 0.00 0.00 4.85
2774 5017 2.514458 ATTTCAGTCCTTCCCGCAAT 57.486 45.000 0.00 0.00 0.00 3.56
2775 5018 1.533625 TTTCAGTCCTTCCCGCAATG 58.466 50.000 0.00 0.00 0.00 2.82
2776 5019 0.400213 TTCAGTCCTTCCCGCAATGT 59.600 50.000 0.00 0.00 0.00 2.71
2777 5020 0.321564 TCAGTCCTTCCCGCAATGTG 60.322 55.000 0.00 0.00 0.00 3.21
2778 5021 1.675641 AGTCCTTCCCGCAATGTGC 60.676 57.895 0.00 0.00 40.69 4.57
2779 5022 1.971167 GTCCTTCCCGCAATGTGCA 60.971 57.895 0.61 0.00 45.36 4.57
2780 5023 1.001020 TCCTTCCCGCAATGTGCAT 60.001 52.632 0.61 0.00 45.36 3.96
2781 5024 0.611618 TCCTTCCCGCAATGTGCATT 60.612 50.000 0.61 0.00 45.36 3.56
2782 5025 0.247185 CCTTCCCGCAATGTGCATTT 59.753 50.000 0.61 0.00 45.36 2.32
2783 5026 1.476085 CCTTCCCGCAATGTGCATTTA 59.524 47.619 0.61 0.00 45.36 1.40
2784 5027 2.480073 CCTTCCCGCAATGTGCATTTAG 60.480 50.000 0.61 0.00 45.36 1.85
2785 5028 1.832883 TCCCGCAATGTGCATTTAGT 58.167 45.000 0.61 0.00 45.36 2.24
2786 5029 1.472082 TCCCGCAATGTGCATTTAGTG 59.528 47.619 0.61 0.00 45.36 2.74
2787 5030 1.202114 CCCGCAATGTGCATTTAGTGT 59.798 47.619 0.61 0.00 45.36 3.55
2788 5031 2.252747 CCGCAATGTGCATTTAGTGTG 58.747 47.619 0.61 0.00 45.36 3.82
2789 5032 2.095314 CCGCAATGTGCATTTAGTGTGA 60.095 45.455 9.94 0.00 45.36 3.58
2790 5033 3.165890 CGCAATGTGCATTTAGTGTGAG 58.834 45.455 0.61 0.00 45.36 3.51
2791 5034 3.504863 GCAATGTGCATTTAGTGTGAGG 58.495 45.455 0.00 0.00 44.26 3.86
2792 5035 3.191162 GCAATGTGCATTTAGTGTGAGGA 59.809 43.478 0.00 0.00 44.26 3.71
2793 5036 4.673580 GCAATGTGCATTTAGTGTGAGGAG 60.674 45.833 0.00 0.00 44.26 3.69
2794 5037 4.558226 ATGTGCATTTAGTGTGAGGAGA 57.442 40.909 0.00 0.00 0.00 3.71
2795 5038 3.664107 TGTGCATTTAGTGTGAGGAGAC 58.336 45.455 0.00 0.00 0.00 3.36
2796 5039 3.070878 TGTGCATTTAGTGTGAGGAGACA 59.929 43.478 0.00 0.00 0.00 3.41
2797 5040 4.256920 GTGCATTTAGTGTGAGGAGACAT 58.743 43.478 0.00 0.00 0.00 3.06
2798 5041 4.697352 GTGCATTTAGTGTGAGGAGACATT 59.303 41.667 0.00 0.00 0.00 2.71
2799 5042 4.937620 TGCATTTAGTGTGAGGAGACATTC 59.062 41.667 0.00 0.00 0.00 2.67
2800 5043 5.181748 GCATTTAGTGTGAGGAGACATTCT 58.818 41.667 0.00 0.00 0.00 2.40
2801 5044 5.645497 GCATTTAGTGTGAGGAGACATTCTT 59.355 40.000 0.00 0.00 0.00 2.52
2802 5045 6.818644 GCATTTAGTGTGAGGAGACATTCTTA 59.181 38.462 0.00 0.00 0.00 2.10
2803 5046 7.497249 GCATTTAGTGTGAGGAGACATTCTTAT 59.503 37.037 0.00 0.00 0.00 1.73
2804 5047 9.039870 CATTTAGTGTGAGGAGACATTCTTATC 57.960 37.037 0.00 0.00 0.00 1.75
2805 5048 7.718334 TTAGTGTGAGGAGACATTCTTATCA 57.282 36.000 0.00 0.00 0.00 2.15
2806 5049 6.611613 AGTGTGAGGAGACATTCTTATCAA 57.388 37.500 0.00 0.00 0.00 2.57
2807 5050 6.402222 AGTGTGAGGAGACATTCTTATCAAC 58.598 40.000 0.00 0.00 0.00 3.18
2808 5051 6.212388 AGTGTGAGGAGACATTCTTATCAACT 59.788 38.462 0.00 0.00 0.00 3.16
2809 5052 7.397476 AGTGTGAGGAGACATTCTTATCAACTA 59.603 37.037 0.00 0.00 0.00 2.24
2810 5053 7.704472 GTGTGAGGAGACATTCTTATCAACTAG 59.296 40.741 0.00 0.00 0.00 2.57
2811 5054 7.615757 TGTGAGGAGACATTCTTATCAACTAGA 59.384 37.037 0.00 0.00 0.00 2.43
2812 5055 8.470805 GTGAGGAGACATTCTTATCAACTAGAA 58.529 37.037 0.00 0.00 35.08 2.10
2813 5056 9.035890 TGAGGAGACATTCTTATCAACTAGAAA 57.964 33.333 0.00 0.00 34.35 2.52
2814 5057 9.877178 GAGGAGACATTCTTATCAACTAGAAAA 57.123 33.333 0.00 0.00 34.35 2.29
2834 5077 8.552083 AGAAAAAGGTTTATGATGATTTTGCC 57.448 30.769 0.00 0.00 0.00 4.52
2835 5078 8.156165 AGAAAAAGGTTTATGATGATTTTGCCA 58.844 29.630 0.00 0.00 0.00 4.92
2836 5079 8.688747 AAAAAGGTTTATGATGATTTTGCCAA 57.311 26.923 0.00 0.00 0.00 4.52
2837 5080 8.866970 AAAAGGTTTATGATGATTTTGCCAAT 57.133 26.923 0.00 0.00 0.00 3.16
2838 5081 8.496707 AAAGGTTTATGATGATTTTGCCAATC 57.503 30.769 0.00 0.00 0.00 2.67
2839 5082 7.427989 AGGTTTATGATGATTTTGCCAATCT 57.572 32.000 7.14 0.00 0.00 2.40
2840 5083 8.537728 AGGTTTATGATGATTTTGCCAATCTA 57.462 30.769 7.14 0.00 0.00 1.98
2841 5084 8.980596 AGGTTTATGATGATTTTGCCAATCTAA 58.019 29.630 7.14 0.00 0.00 2.10
2842 5085 9.598517 GGTTTATGATGATTTTGCCAATCTAAA 57.401 29.630 7.14 2.35 0.00 1.85
2848 5091 9.806203 TGATGATTTTGCCAATCTAAAGTAATG 57.194 29.630 7.14 0.00 0.00 1.90
2849 5092 9.807649 GATGATTTTGCCAATCTAAAGTAATGT 57.192 29.630 7.14 0.00 0.00 2.71
2850 5093 8.984891 TGATTTTGCCAATCTAAAGTAATGTG 57.015 30.769 7.14 0.00 0.00 3.21
2851 5094 8.584157 TGATTTTGCCAATCTAAAGTAATGTGT 58.416 29.630 7.14 0.00 0.00 3.72
2852 5095 8.986477 ATTTTGCCAATCTAAAGTAATGTGTC 57.014 30.769 0.00 0.00 0.00 3.67
2853 5096 5.794687 TGCCAATCTAAAGTAATGTGTCG 57.205 39.130 0.00 0.00 0.00 4.35
2854 5097 4.634004 TGCCAATCTAAAGTAATGTGTCGG 59.366 41.667 0.00 0.00 0.00 4.79
2855 5098 4.495844 GCCAATCTAAAGTAATGTGTCGGC 60.496 45.833 0.00 0.00 0.00 5.54
2856 5099 4.876107 CCAATCTAAAGTAATGTGTCGGCT 59.124 41.667 0.00 0.00 0.00 5.52
2857 5100 5.006746 CCAATCTAAAGTAATGTGTCGGCTC 59.993 44.000 0.00 0.00 0.00 4.70
2858 5101 4.794278 TCTAAAGTAATGTGTCGGCTCA 57.206 40.909 0.00 0.00 0.00 4.26
2859 5102 4.744570 TCTAAAGTAATGTGTCGGCTCAG 58.255 43.478 0.00 0.00 0.00 3.35
2860 5103 3.678056 AAAGTAATGTGTCGGCTCAGA 57.322 42.857 0.00 0.00 0.00 3.27
2861 5104 2.656560 AGTAATGTGTCGGCTCAGAC 57.343 50.000 0.00 0.00 41.30 3.51
2866 5109 4.889427 TGTCGGCTCAGACAATCG 57.111 55.556 7.53 0.00 46.81 3.34
2867 5110 2.263153 TGTCGGCTCAGACAATCGA 58.737 52.632 7.53 0.00 46.81 3.59
2868 5111 0.601057 TGTCGGCTCAGACAATCGAA 59.399 50.000 7.53 0.00 46.81 3.71
2869 5112 1.272781 GTCGGCTCAGACAATCGAAG 58.727 55.000 0.00 0.00 40.65 3.79
2870 5113 1.135373 GTCGGCTCAGACAATCGAAGA 60.135 52.381 0.00 0.00 40.38 2.87
2871 5114 1.751351 TCGGCTCAGACAATCGAAGAT 59.249 47.619 0.00 0.00 45.12 2.40
2872 5115 1.857217 CGGCTCAGACAATCGAAGATG 59.143 52.381 0.00 0.00 45.12 2.90
2873 5116 1.596727 GGCTCAGACAATCGAAGATGC 59.403 52.381 0.00 0.00 45.12 3.91
2874 5117 2.548875 GCTCAGACAATCGAAGATGCT 58.451 47.619 0.00 0.00 45.12 3.79
2875 5118 2.539274 GCTCAGACAATCGAAGATGCTC 59.461 50.000 0.00 0.00 45.12 4.26
2876 5119 3.778618 CTCAGACAATCGAAGATGCTCA 58.221 45.455 0.00 0.00 45.12 4.26
2877 5120 4.370049 CTCAGACAATCGAAGATGCTCAT 58.630 43.478 0.00 0.00 45.12 2.90
2878 5121 5.520376 TCAGACAATCGAAGATGCTCATA 57.480 39.130 0.00 0.00 45.12 2.15
2879 5122 5.527033 TCAGACAATCGAAGATGCTCATAG 58.473 41.667 0.00 0.00 45.12 2.23
2880 5123 4.685165 CAGACAATCGAAGATGCTCATAGG 59.315 45.833 0.00 0.00 45.12 2.57
2881 5124 3.993081 GACAATCGAAGATGCTCATAGGG 59.007 47.826 0.00 0.00 45.12 3.53
2882 5125 3.244353 ACAATCGAAGATGCTCATAGGGG 60.244 47.826 0.00 0.00 45.12 4.79
2883 5126 2.088104 TCGAAGATGCTCATAGGGGT 57.912 50.000 0.00 0.00 0.00 4.95
2884 5127 3.238788 TCGAAGATGCTCATAGGGGTA 57.761 47.619 0.00 0.00 0.00 3.69
2885 5128 2.891580 TCGAAGATGCTCATAGGGGTAC 59.108 50.000 0.00 0.00 0.00 3.34
2886 5129 2.628178 CGAAGATGCTCATAGGGGTACA 59.372 50.000 0.00 0.00 0.00 2.90
2887 5130 3.553096 CGAAGATGCTCATAGGGGTACAC 60.553 52.174 0.00 0.00 0.00 2.90
2888 5131 3.336509 AGATGCTCATAGGGGTACACT 57.663 47.619 0.00 0.00 0.00 3.55
2889 5132 4.471078 AGATGCTCATAGGGGTACACTA 57.529 45.455 0.00 0.00 0.00 2.74
2890 5133 5.017093 AGATGCTCATAGGGGTACACTAT 57.983 43.478 0.00 0.00 0.00 2.12
2891 5134 4.774726 AGATGCTCATAGGGGTACACTATG 59.225 45.833 21.68 21.68 45.75 2.23
2892 5135 2.632996 TGCTCATAGGGGTACACTATGC 59.367 50.000 22.39 16.11 44.63 3.14
2893 5136 2.632996 GCTCATAGGGGTACACTATGCA 59.367 50.000 22.39 14.58 44.63 3.96
2894 5137 3.261897 GCTCATAGGGGTACACTATGCAT 59.738 47.826 22.39 3.79 44.63 3.96
2895 5138 4.825422 CTCATAGGGGTACACTATGCATG 58.175 47.826 22.39 14.85 44.63 4.06
2896 5139 4.231273 TCATAGGGGTACACTATGCATGT 58.769 43.478 22.39 2.58 44.63 3.21
2897 5140 4.040339 TCATAGGGGTACACTATGCATGTG 59.960 45.833 22.39 20.63 44.63 3.21
2899 5142 2.092968 AGGGGTACACTATGCATGTGTG 60.093 50.000 29.32 26.76 46.54 3.82
2900 5143 2.355716 GGGGTACACTATGCATGTGTGT 60.356 50.000 29.60 29.60 46.54 3.72
2901 5144 2.677836 GGGTACACTATGCATGTGTGTG 59.322 50.000 32.11 24.75 46.54 3.82
2902 5145 3.334691 GGTACACTATGCATGTGTGTGT 58.665 45.455 32.11 27.50 46.54 3.72
2903 5146 3.751175 GGTACACTATGCATGTGTGTGTT 59.249 43.478 32.11 18.55 46.54 3.32
2904 5147 4.142902 GGTACACTATGCATGTGTGTGTTC 60.143 45.833 32.11 24.34 46.54 3.18
2905 5148 3.475575 ACACTATGCATGTGTGTGTTCA 58.524 40.909 27.77 0.00 45.57 3.18
2906 5149 4.074259 ACACTATGCATGTGTGTGTTCAT 58.926 39.130 27.77 11.28 45.57 2.57
2907 5150 5.244755 ACACTATGCATGTGTGTGTTCATA 58.755 37.500 27.77 0.00 45.57 2.15
2908 5151 5.352293 ACACTATGCATGTGTGTGTTCATAG 59.648 40.000 27.77 10.14 45.57 2.23
2909 5152 4.877823 ACTATGCATGTGTGTGTTCATAGG 59.122 41.667 10.16 1.85 38.28 2.57
2910 5153 2.435422 TGCATGTGTGTGTTCATAGGG 58.565 47.619 0.00 0.00 0.00 3.53
2911 5154 2.224744 TGCATGTGTGTGTTCATAGGGT 60.225 45.455 0.00 0.00 0.00 4.34
2912 5155 2.162208 GCATGTGTGTGTTCATAGGGTG 59.838 50.000 0.00 0.00 0.00 4.61
2913 5156 3.673902 CATGTGTGTGTTCATAGGGTGA 58.326 45.455 0.00 0.00 34.25 4.02
2914 5157 4.264253 CATGTGTGTGTTCATAGGGTGAT 58.736 43.478 0.00 0.00 36.54 3.06
2915 5158 3.673902 TGTGTGTGTTCATAGGGTGATG 58.326 45.455 0.00 0.00 36.54 3.07
2916 5159 3.326297 TGTGTGTGTTCATAGGGTGATGA 59.674 43.478 0.00 0.00 36.54 2.92
2917 5160 3.935203 GTGTGTGTTCATAGGGTGATGAG 59.065 47.826 0.00 0.00 37.16 2.90
2918 5161 3.582647 TGTGTGTTCATAGGGTGATGAGT 59.417 43.478 0.00 0.00 37.16 3.41
2919 5162 3.935203 GTGTGTTCATAGGGTGATGAGTG 59.065 47.826 0.00 0.00 37.16 3.51
2920 5163 3.582647 TGTGTTCATAGGGTGATGAGTGT 59.417 43.478 0.00 0.00 37.16 3.55
2921 5164 4.041567 TGTGTTCATAGGGTGATGAGTGTT 59.958 41.667 0.00 0.00 37.16 3.32
2922 5165 5.003804 GTGTTCATAGGGTGATGAGTGTTT 58.996 41.667 0.00 0.00 37.16 2.83
2923 5166 5.003160 TGTTCATAGGGTGATGAGTGTTTG 58.997 41.667 0.00 0.00 37.16 2.93
2924 5167 4.908601 TCATAGGGTGATGAGTGTTTGT 57.091 40.909 0.00 0.00 32.05 2.83
2925 5168 6.170506 GTTCATAGGGTGATGAGTGTTTGTA 58.829 40.000 0.00 0.00 37.16 2.41
2926 5169 5.730550 TCATAGGGTGATGAGTGTTTGTAC 58.269 41.667 0.00 0.00 32.05 2.90
2927 5170 5.483937 TCATAGGGTGATGAGTGTTTGTACT 59.516 40.000 0.00 0.00 32.05 2.73
2928 5171 4.008074 AGGGTGATGAGTGTTTGTACTG 57.992 45.455 0.00 0.00 0.00 2.74
2929 5172 3.391296 AGGGTGATGAGTGTTTGTACTGT 59.609 43.478 0.00 0.00 0.00 3.55
2930 5173 3.498397 GGGTGATGAGTGTTTGTACTGTG 59.502 47.826 0.00 0.00 0.00 3.66
2931 5174 4.127171 GGTGATGAGTGTTTGTACTGTGT 58.873 43.478 0.00 0.00 0.00 3.72
2932 5175 4.574828 GGTGATGAGTGTTTGTACTGTGTT 59.425 41.667 0.00 0.00 0.00 3.32
2933 5176 5.756347 GGTGATGAGTGTTTGTACTGTGTTA 59.244 40.000 0.00 0.00 0.00 2.41
2934 5177 6.259167 GGTGATGAGTGTTTGTACTGTGTTAA 59.741 38.462 0.00 0.00 0.00 2.01
2935 5178 7.201661 GGTGATGAGTGTTTGTACTGTGTTAAA 60.202 37.037 0.00 0.00 0.00 1.52
2936 5179 7.850982 GTGATGAGTGTTTGTACTGTGTTAAAG 59.149 37.037 0.00 0.00 0.00 1.85
2937 5180 7.766738 TGATGAGTGTTTGTACTGTGTTAAAGA 59.233 33.333 0.00 0.00 0.00 2.52
2938 5181 7.908827 TGAGTGTTTGTACTGTGTTAAAGAA 57.091 32.000 0.00 0.00 0.00 2.52
2939 5182 8.325421 TGAGTGTTTGTACTGTGTTAAAGAAA 57.675 30.769 0.00 0.00 0.00 2.52
2940 5183 8.784994 TGAGTGTTTGTACTGTGTTAAAGAAAA 58.215 29.630 0.00 0.00 0.00 2.29
2941 5184 8.959734 AGTGTTTGTACTGTGTTAAAGAAAAC 57.040 30.769 0.00 0.00 0.00 2.43
2942 5185 8.789762 AGTGTTTGTACTGTGTTAAAGAAAACT 58.210 29.630 0.00 0.00 0.00 2.66
2943 5186 9.058424 GTGTTTGTACTGTGTTAAAGAAAACTC 57.942 33.333 0.00 0.00 0.00 3.01
2944 5187 8.238631 TGTTTGTACTGTGTTAAAGAAAACTCC 58.761 33.333 0.00 0.00 0.00 3.85
2945 5188 7.925043 TTGTACTGTGTTAAAGAAAACTCCA 57.075 32.000 0.00 0.00 0.00 3.86
2946 5189 7.925043 TGTACTGTGTTAAAGAAAACTCCAA 57.075 32.000 0.00 0.00 0.00 3.53
2947 5190 8.338072 TGTACTGTGTTAAAGAAAACTCCAAA 57.662 30.769 0.00 0.00 0.00 3.28
2948 5191 8.794553 TGTACTGTGTTAAAGAAAACTCCAAAA 58.205 29.630 0.00 0.00 0.00 2.44
2949 5192 9.797556 GTACTGTGTTAAAGAAAACTCCAAAAT 57.202 29.630 0.00 0.00 0.00 1.82
2958 5201 8.478775 AAAGAAAACTCCAAAATTACTAGCCT 57.521 30.769 0.00 0.00 0.00 4.58
2959 5202 7.689446 AGAAAACTCCAAAATTACTAGCCTC 57.311 36.000 0.00 0.00 0.00 4.70
2960 5203 7.231467 AGAAAACTCCAAAATTACTAGCCTCA 58.769 34.615 0.00 0.00 0.00 3.86
2961 5204 7.890655 AGAAAACTCCAAAATTACTAGCCTCAT 59.109 33.333 0.00 0.00 0.00 2.90
2962 5205 7.396540 AAACTCCAAAATTACTAGCCTCATG 57.603 36.000 0.00 0.00 0.00 3.07
2963 5206 5.440610 ACTCCAAAATTACTAGCCTCATGG 58.559 41.667 0.00 0.00 0.00 3.66
2964 5207 5.191722 ACTCCAAAATTACTAGCCTCATGGA 59.808 40.000 0.00 0.00 34.57 3.41
2965 5208 5.437060 TCCAAAATTACTAGCCTCATGGAC 58.563 41.667 0.00 0.00 34.57 4.02
2966 5209 5.045213 TCCAAAATTACTAGCCTCATGGACA 60.045 40.000 0.00 0.00 34.57 4.02
2967 5210 5.829924 CCAAAATTACTAGCCTCATGGACAT 59.170 40.000 0.00 0.00 34.57 3.06
2968 5211 6.238842 CCAAAATTACTAGCCTCATGGACATG 60.239 42.308 5.95 5.95 40.09 3.21
2969 5212 3.475566 TTACTAGCCTCATGGACATGC 57.524 47.619 7.41 0.00 38.65 4.06
2970 5213 1.206878 ACTAGCCTCATGGACATGCA 58.793 50.000 7.41 0.00 38.65 3.96
2971 5214 1.561076 ACTAGCCTCATGGACATGCAA 59.439 47.619 7.41 0.00 38.65 4.08
2972 5215 2.025981 ACTAGCCTCATGGACATGCAAA 60.026 45.455 7.41 0.00 38.65 3.68
2973 5216 1.927487 AGCCTCATGGACATGCAAAA 58.073 45.000 7.41 0.00 38.65 2.44
2974 5217 2.250031 AGCCTCATGGACATGCAAAAA 58.750 42.857 7.41 0.00 38.65 1.94
2993 5236 3.715628 AAATGCCAATGAATACCGAGC 57.284 42.857 0.00 0.00 0.00 5.03
2994 5237 2.645838 ATGCCAATGAATACCGAGCT 57.354 45.000 0.00 0.00 0.00 4.09
2995 5238 1.953559 TGCCAATGAATACCGAGCTC 58.046 50.000 2.73 2.73 0.00 4.09
2996 5239 1.230324 GCCAATGAATACCGAGCTCC 58.770 55.000 8.47 0.00 0.00 4.70
2997 5240 1.475034 GCCAATGAATACCGAGCTCCA 60.475 52.381 8.47 0.00 0.00 3.86
2998 5241 2.487934 CCAATGAATACCGAGCTCCAG 58.512 52.381 8.47 2.11 0.00 3.86
2999 5242 2.158900 CCAATGAATACCGAGCTCCAGT 60.159 50.000 8.47 8.73 0.00 4.00
3000 5243 2.868583 CAATGAATACCGAGCTCCAGTG 59.131 50.000 8.47 4.82 0.00 3.66
3001 5244 1.847328 TGAATACCGAGCTCCAGTGA 58.153 50.000 8.47 0.00 0.00 3.41
3002 5245 1.751351 TGAATACCGAGCTCCAGTGAG 59.249 52.381 8.47 0.00 41.84 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 4.103785 AGGTTCAATGGATAGAGGTGATGG 59.896 45.833 0.00 0.00 0.00 3.51
23 24 4.019411 TGCTCACAAGGTTCAATGGATAGA 60.019 41.667 0.00 0.00 0.00 1.98
34 35 1.523758 GACGGATTGCTCACAAGGTT 58.476 50.000 0.00 0.00 39.69 3.50
175 176 2.424302 CCAACCAGTTCCGGTCGT 59.576 61.111 0.00 0.00 38.76 4.34
185 186 4.388499 CCCGTCGTCCCCAACCAG 62.388 72.222 0.00 0.00 0.00 4.00
242 243 1.098050 GCATTTGGTCGGCATTCTCT 58.902 50.000 0.00 0.00 0.00 3.10
248 249 0.039617 CGAAAAGCATTTGGTCGGCA 60.040 50.000 0.00 0.00 39.02 5.69
320 325 1.658114 CACGTCGTCCTCCACAAGA 59.342 57.895 0.00 0.00 0.00 3.02
329 334 3.934391 CTCCCAAGCCACGTCGTCC 62.934 68.421 0.00 0.00 0.00 4.79
462 471 3.499737 GGCCGAATGGACACGCAG 61.500 66.667 0.00 0.00 45.78 5.18
484 493 1.285950 GCCCAAGTTTGAACCGAGC 59.714 57.895 0.00 0.00 0.00 5.03
491 501 0.397254 TTTTCCCGGCCCAAGTTTGA 60.397 50.000 0.00 0.00 0.00 2.69
509 519 2.743636 TTCTGTCCGCTTTCGATCTT 57.256 45.000 0.00 0.00 38.10 2.40
510 520 2.737252 GTTTTCTGTCCGCTTTCGATCT 59.263 45.455 0.00 0.00 38.10 2.75
562 572 6.041979 AGGGTAAATGAACAAAGCATGTCTTT 59.958 34.615 8.68 8.68 45.43 2.52
566 576 4.832266 TGAGGGTAAATGAACAAAGCATGT 59.168 37.500 0.00 0.00 46.82 3.21
568 578 6.418057 TTTGAGGGTAAATGAACAAAGCAT 57.582 33.333 0.00 0.00 0.00 3.79
587 597 3.054434 CCTATCCACCAGTGTCCATTTGA 60.054 47.826 0.00 0.00 0.00 2.69
602 612 2.184830 CGCGACCTCGTCCTATCCA 61.185 63.158 0.00 0.00 42.22 3.41
606 616 1.968017 AACACGCGACCTCGTCCTA 60.968 57.895 15.93 0.00 41.21 2.94
626 636 5.453762 CCTTCTTTTCATTTCAGGCCAACTT 60.454 40.000 5.01 0.00 0.00 2.66
639 649 5.776716 TCTTCCAAATCAGCCTTCTTTTCAT 59.223 36.000 0.00 0.00 0.00 2.57
640 650 5.139727 TCTTCCAAATCAGCCTTCTTTTCA 58.860 37.500 0.00 0.00 0.00 2.69
656 669 0.323360 CCGGGCATTCCTTCTTCCAA 60.323 55.000 0.00 0.00 0.00 3.53
688 705 7.342769 TCTAGAACAGCGACCAAGATTTATA 57.657 36.000 0.00 0.00 0.00 0.98
696 718 3.462483 TGTTTCTAGAACAGCGACCAA 57.538 42.857 4.18 0.00 0.00 3.67
728 750 2.687200 AGCGAGGTGGGTGCCATA 60.687 61.111 0.00 0.00 35.28 2.74
750 772 2.009051 CAATTAGTGCATCACGGCTCA 58.991 47.619 0.00 0.00 39.64 4.26
805 827 1.203237 AGCTCTCCAGAAGGGTGAAGA 60.203 52.381 0.00 0.00 38.63 2.87
832 856 0.039035 GTGCCTTGGTGGGATGGTTA 59.961 55.000 0.00 0.00 38.80 2.85
896 930 1.972752 TGTGCAGCATGACGCCAAT 60.973 52.632 0.00 0.00 44.04 3.16
975 1030 2.100631 CCTTGGTTGCTACTCGCGG 61.101 63.158 6.13 0.00 43.27 6.46
976 1031 2.100631 CCCTTGGTTGCTACTCGCG 61.101 63.158 0.00 0.00 43.27 5.87
977 1032 0.741221 CTCCCTTGGTTGCTACTCGC 60.741 60.000 0.00 0.00 39.77 5.03
978 1033 0.895530 TCTCCCTTGGTTGCTACTCG 59.104 55.000 0.00 0.00 0.00 4.18
979 1034 3.418684 TTTCTCCCTTGGTTGCTACTC 57.581 47.619 0.00 0.00 0.00 2.59
980 1035 3.876309 TTTTCTCCCTTGGTTGCTACT 57.124 42.857 0.00 0.00 0.00 2.57
981 1036 3.193479 CCATTTTCTCCCTTGGTTGCTAC 59.807 47.826 0.00 0.00 0.00 3.58
1158 1213 1.276421 CAGAGGATTTGAGTGGTCGGT 59.724 52.381 0.00 0.00 0.00 4.69
1185 1240 4.039488 ACAGGACCGTAACAAGTTGATACA 59.961 41.667 19.58 0.00 0.00 2.29
1199 1254 0.106149 GACAGTTTCCACAGGACCGT 59.894 55.000 0.00 0.00 0.00 4.83
1200 1255 0.602905 GGACAGTTTCCACAGGACCG 60.603 60.000 0.00 0.00 45.10 4.79
1209 1264 1.731720 CAGCTAGCTGGACAGTTTCC 58.268 55.000 33.06 0.00 46.13 3.13
1210 1265 1.082690 GCAGCTAGCTGGACAGTTTC 58.917 55.000 38.52 20.07 43.77 2.78
1211 1266 3.239861 GCAGCTAGCTGGACAGTTT 57.760 52.632 38.52 4.09 43.77 2.66
1221 1276 5.469421 AGAATTACAATCATCAGCAGCTAGC 59.531 40.000 6.62 6.62 46.19 3.42
1222 1277 8.657729 CATAGAATTACAATCATCAGCAGCTAG 58.342 37.037 0.00 0.00 0.00 3.42
1223 1278 8.370182 TCATAGAATTACAATCATCAGCAGCTA 58.630 33.333 0.00 0.00 0.00 3.32
1224 1279 7.222161 TCATAGAATTACAATCATCAGCAGCT 58.778 34.615 0.00 0.00 0.00 4.24
1225 1280 7.172875 ACTCATAGAATTACAATCATCAGCAGC 59.827 37.037 0.00 0.00 0.00 5.25
1226 1281 8.604640 ACTCATAGAATTACAATCATCAGCAG 57.395 34.615 0.00 0.00 0.00 4.24
1227 1282 8.833493 CAACTCATAGAATTACAATCATCAGCA 58.167 33.333 0.00 0.00 0.00 4.41
1228 1283 9.049523 TCAACTCATAGAATTACAATCATCAGC 57.950 33.333 0.00 0.00 0.00 4.26
1247 1302 9.431887 GGTGAATAACTTGTATTACTCAACTCA 57.568 33.333 0.00 0.00 27.86 3.41
1248 1303 8.880750 GGGTGAATAACTTGTATTACTCAACTC 58.119 37.037 0.00 0.00 30.52 3.01
1249 1304 7.548075 CGGGTGAATAACTTGTATTACTCAACT 59.452 37.037 0.00 0.00 30.52 3.16
1250 1305 7.675637 GCGGGTGAATAACTTGTATTACTCAAC 60.676 40.741 0.00 0.00 29.21 3.18
1251 1306 6.314400 GCGGGTGAATAACTTGTATTACTCAA 59.686 38.462 0.00 0.00 0.00 3.02
1252 1307 5.813672 GCGGGTGAATAACTTGTATTACTCA 59.186 40.000 0.00 0.00 0.00 3.41
1253 1308 5.813672 TGCGGGTGAATAACTTGTATTACTC 59.186 40.000 0.00 0.00 0.00 2.59
1254 1309 5.736813 TGCGGGTGAATAACTTGTATTACT 58.263 37.500 0.00 0.00 0.00 2.24
1255 1310 6.425577 TTGCGGGTGAATAACTTGTATTAC 57.574 37.500 0.00 0.00 0.00 1.89
1256 1311 7.390996 TCTTTTGCGGGTGAATAACTTGTATTA 59.609 33.333 0.00 0.00 0.00 0.98
1257 1312 5.968528 TTTGCGGGTGAATAACTTGTATT 57.031 34.783 0.00 0.00 0.00 1.89
1258 1313 5.708230 TCTTTTGCGGGTGAATAACTTGTAT 59.292 36.000 0.00 0.00 0.00 2.29
1259 1314 5.064558 TCTTTTGCGGGTGAATAACTTGTA 58.935 37.500 0.00 0.00 0.00 2.41
1260 1315 3.886505 TCTTTTGCGGGTGAATAACTTGT 59.113 39.130 0.00 0.00 0.00 3.16
1261 1316 4.497473 TCTTTTGCGGGTGAATAACTTG 57.503 40.909 0.00 0.00 0.00 3.16
1262 1317 5.068591 AGTTTCTTTTGCGGGTGAATAACTT 59.931 36.000 0.00 0.00 0.00 2.66
1263 1318 4.583073 AGTTTCTTTTGCGGGTGAATAACT 59.417 37.500 0.00 0.00 0.00 2.24
1264 1319 4.866921 AGTTTCTTTTGCGGGTGAATAAC 58.133 39.130 0.00 0.00 0.00 1.89
1265 1320 5.163499 ACAAGTTTCTTTTGCGGGTGAATAA 60.163 36.000 0.00 0.00 0.00 1.40
1266 1321 4.339814 ACAAGTTTCTTTTGCGGGTGAATA 59.660 37.500 0.00 0.00 0.00 1.75
1267 1322 3.132111 ACAAGTTTCTTTTGCGGGTGAAT 59.868 39.130 0.00 0.00 0.00 2.57
1268 1323 2.494073 ACAAGTTTCTTTTGCGGGTGAA 59.506 40.909 0.00 0.00 0.00 3.18
1269 1324 2.096248 ACAAGTTTCTTTTGCGGGTGA 58.904 42.857 0.00 0.00 0.00 4.02
1270 1325 2.577449 ACAAGTTTCTTTTGCGGGTG 57.423 45.000 0.00 0.00 0.00 4.61
1271 1326 3.487879 CGTAACAAGTTTCTTTTGCGGGT 60.488 43.478 0.00 0.00 0.00 5.28
1272 1327 3.040099 CGTAACAAGTTTCTTTTGCGGG 58.960 45.455 0.00 0.00 0.00 6.13
1273 1328 3.040099 CCGTAACAAGTTTCTTTTGCGG 58.960 45.455 13.69 13.69 0.00 5.69
1274 1329 3.687200 ACCGTAACAAGTTTCTTTTGCG 58.313 40.909 0.00 0.00 0.00 4.85
1275 1330 5.229260 CAGAACCGTAACAAGTTTCTTTTGC 59.771 40.000 0.00 0.00 0.00 3.68
1276 1331 6.548171 TCAGAACCGTAACAAGTTTCTTTTG 58.452 36.000 0.00 0.00 0.00 2.44
1277 1332 6.746745 TCAGAACCGTAACAAGTTTCTTTT 57.253 33.333 0.00 0.00 0.00 2.27
1278 1333 6.725246 CATCAGAACCGTAACAAGTTTCTTT 58.275 36.000 0.00 0.00 0.00 2.52
1279 1334 5.277828 GCATCAGAACCGTAACAAGTTTCTT 60.278 40.000 0.00 0.00 0.00 2.52
1280 1335 4.213482 GCATCAGAACCGTAACAAGTTTCT 59.787 41.667 0.00 0.00 0.00 2.52
1281 1336 4.024387 TGCATCAGAACCGTAACAAGTTTC 60.024 41.667 0.00 0.00 0.00 2.78
1282 1337 3.880490 TGCATCAGAACCGTAACAAGTTT 59.120 39.130 0.00 0.00 0.00 2.66
1283 1338 3.472652 TGCATCAGAACCGTAACAAGTT 58.527 40.909 0.00 0.00 0.00 2.66
1284 1339 3.120321 TGCATCAGAACCGTAACAAGT 57.880 42.857 0.00 0.00 0.00 3.16
1285 1340 3.745975 TCTTGCATCAGAACCGTAACAAG 59.254 43.478 0.00 0.00 35.69 3.16
1286 1341 3.734463 TCTTGCATCAGAACCGTAACAA 58.266 40.909 0.00 0.00 0.00 2.83
1287 1342 3.394674 TCTTGCATCAGAACCGTAACA 57.605 42.857 0.00 0.00 0.00 2.41
1288 1343 3.684788 ACATCTTGCATCAGAACCGTAAC 59.315 43.478 0.00 0.00 0.00 2.50
1289 1344 3.937814 ACATCTTGCATCAGAACCGTAA 58.062 40.909 0.00 0.00 0.00 3.18
1290 1345 3.610040 ACATCTTGCATCAGAACCGTA 57.390 42.857 0.00 0.00 0.00 4.02
1291 1346 2.479566 ACATCTTGCATCAGAACCGT 57.520 45.000 0.00 0.00 0.00 4.83
1292 1347 3.837213 AAACATCTTGCATCAGAACCG 57.163 42.857 0.00 0.00 0.00 4.44
1409 1480 8.942338 AGCGATTAACATTTACTATGACAAGA 57.058 30.769 0.00 0.00 0.00 3.02
1417 1488 5.433526 AGGCCAAGCGATTAACATTTACTA 58.566 37.500 5.01 0.00 0.00 1.82
1419 1490 4.335594 AGAGGCCAAGCGATTAACATTTAC 59.664 41.667 5.01 0.00 0.00 2.01
1431 1509 0.239347 CAAGAAACAGAGGCCAAGCG 59.761 55.000 5.01 0.00 0.00 4.68
1449 1527 1.224315 CGGTCCCATTCAGATGCCA 59.776 57.895 0.00 0.00 31.67 4.92
1457 1535 2.835027 CTTTACTAGCCGGTCCCATTC 58.165 52.381 1.90 0.00 0.00 2.67
1498 1576 1.153369 AACGAGCATCCATCCACCG 60.153 57.895 0.00 0.00 0.00 4.94
1515 1637 9.519191 TGAGAATTTGAGAGGATATTTGAACAA 57.481 29.630 0.00 0.00 0.00 2.83
1545 1667 6.597614 TGAAAACACAACAAAAACAGAATGC 58.402 32.000 0.00 0.00 42.53 3.56
1550 1672 6.640499 TGACTCTGAAAACACAACAAAAACAG 59.360 34.615 0.00 0.00 0.00 3.16
1619 1741 1.251527 TTCCCTCAGCAGGTCGACTC 61.252 60.000 16.46 5.70 38.30 3.36
1803 1925 3.354467 CTCGTAGACCTCCAGTACCTTT 58.646 50.000 0.00 0.00 0.00 3.11
1809 1931 0.966370 GTGCCTCGTAGACCTCCAGT 60.966 60.000 0.00 0.00 0.00 4.00
1838 1960 4.814294 CGGCCAGGTACTCGTGCC 62.814 72.222 2.24 0.00 34.60 5.01
1959 2081 1.351080 CCATGAGCCTCTCCCACCAT 61.351 60.000 0.00 0.00 0.00 3.55
2068 2190 5.120830 ACAAGAAAACGTCATACAGATCAGC 59.879 40.000 0.00 0.00 0.00 4.26
2081 2209 1.202098 GCGACACCAACAAGAAAACGT 60.202 47.619 0.00 0.00 0.00 3.99
2122 2255 2.394563 CCGCACACACACACACACA 61.395 57.895 0.00 0.00 0.00 3.72
2123 2256 2.403186 CCGCACACACACACACAC 59.597 61.111 0.00 0.00 0.00 3.82
2124 2257 3.504273 GCCGCACACACACACACA 61.504 61.111 0.00 0.00 0.00 3.72
2125 2258 3.202001 AGCCGCACACACACACAC 61.202 61.111 0.00 0.00 0.00 3.82
2126 2259 3.201297 CAGCCGCACACACACACA 61.201 61.111 0.00 0.00 0.00 3.72
2127 2260 3.952675 CCAGCCGCACACACACAC 61.953 66.667 0.00 0.00 0.00 3.82
2138 2271 2.879907 CTGGTGCAATTCCAGCCG 59.120 61.111 8.76 0.00 44.46 5.52
2189 2326 7.912056 TTGAACATATCTCAAGAGTTTCCAG 57.088 36.000 0.00 0.00 0.00 3.86
2219 2356 7.596248 CGAAGACATTGTTCCATCTCAATTTTT 59.404 33.333 0.00 0.00 32.85 1.94
2220 2357 7.086376 CGAAGACATTGTTCCATCTCAATTTT 58.914 34.615 0.00 0.00 32.85 1.82
2221 2358 6.207417 ACGAAGACATTGTTCCATCTCAATTT 59.793 34.615 0.00 0.00 32.85 1.82
2222 2359 5.707298 ACGAAGACATTGTTCCATCTCAATT 59.293 36.000 0.00 0.00 32.85 2.32
2223 2360 5.248640 ACGAAGACATTGTTCCATCTCAAT 58.751 37.500 0.00 0.00 35.08 2.57
2270 4479 8.177119 ACACAAACATCTTATTTAAGGCTTGA 57.823 30.769 10.69 0.00 34.14 3.02
2296 4505 5.405269 TCATCGACTAGAAACACACACAATG 59.595 40.000 0.00 0.00 0.00 2.82
2297 4506 5.538118 TCATCGACTAGAAACACACACAAT 58.462 37.500 0.00 0.00 0.00 2.71
2298 4507 4.939271 TCATCGACTAGAAACACACACAA 58.061 39.130 0.00 0.00 0.00 3.33
2299 4508 4.577834 TCATCGACTAGAAACACACACA 57.422 40.909 0.00 0.00 0.00 3.72
2300 4509 4.923871 ACATCATCGACTAGAAACACACAC 59.076 41.667 0.00 0.00 0.00 3.82
2301 4510 5.134202 ACATCATCGACTAGAAACACACA 57.866 39.130 0.00 0.00 0.00 3.72
2302 4511 6.299604 CAAACATCATCGACTAGAAACACAC 58.700 40.000 0.00 0.00 0.00 3.82
2303 4512 5.107104 GCAAACATCATCGACTAGAAACACA 60.107 40.000 0.00 0.00 0.00 3.72
2304 4513 5.107104 TGCAAACATCATCGACTAGAAACAC 60.107 40.000 0.00 0.00 0.00 3.32
2305 4514 4.994217 TGCAAACATCATCGACTAGAAACA 59.006 37.500 0.00 0.00 0.00 2.83
2306 4515 5.530519 TGCAAACATCATCGACTAGAAAC 57.469 39.130 0.00 0.00 0.00 2.78
2366 4575 8.888716 GGCAAAAATATTTCAATACGGGATTTT 58.111 29.630 0.10 0.00 0.00 1.82
2367 4576 8.043710 TGGCAAAAATATTTCAATACGGGATTT 58.956 29.630 0.10 0.00 0.00 2.17
2368 4577 7.560368 TGGCAAAAATATTTCAATACGGGATT 58.440 30.769 0.10 0.00 0.00 3.01
2369 4578 7.118496 TGGCAAAAATATTTCAATACGGGAT 57.882 32.000 0.10 0.00 0.00 3.85
2370 4579 6.531503 TGGCAAAAATATTTCAATACGGGA 57.468 33.333 0.10 0.00 0.00 5.14
2371 4580 5.234116 GCTGGCAAAAATATTTCAATACGGG 59.766 40.000 0.10 0.00 0.00 5.28
2372 4581 5.809562 TGCTGGCAAAAATATTTCAATACGG 59.190 36.000 0.10 0.00 0.00 4.02
2373 4582 6.531240 AGTGCTGGCAAAAATATTTCAATACG 59.469 34.615 0.10 0.00 0.00 3.06
2374 4583 7.545265 TCAGTGCTGGCAAAAATATTTCAATAC 59.455 33.333 0.10 0.00 0.00 1.89
2375 4584 7.609960 TCAGTGCTGGCAAAAATATTTCAATA 58.390 30.769 0.10 0.00 0.00 1.90
2376 4585 6.465948 TCAGTGCTGGCAAAAATATTTCAAT 58.534 32.000 0.10 0.00 0.00 2.57
2377 4586 5.851720 TCAGTGCTGGCAAAAATATTTCAA 58.148 33.333 0.10 0.00 0.00 2.69
2378 4587 5.465532 TCAGTGCTGGCAAAAATATTTCA 57.534 34.783 0.10 0.00 0.00 2.69
2379 4588 6.973229 ATTCAGTGCTGGCAAAAATATTTC 57.027 33.333 0.10 0.00 0.00 2.17
2380 4589 9.452287 AAATATTCAGTGCTGGCAAAAATATTT 57.548 25.926 21.67 21.67 35.15 1.40
2381 4590 8.885722 CAAATATTCAGTGCTGGCAAAAATATT 58.114 29.630 16.48 16.48 33.25 1.28
2382 4591 8.259411 TCAAATATTCAGTGCTGGCAAAAATAT 58.741 29.630 0.00 5.05 0.00 1.28
2383 4592 7.609960 TCAAATATTCAGTGCTGGCAAAAATA 58.390 30.769 0.00 3.06 0.00 1.40
2384 4593 6.465948 TCAAATATTCAGTGCTGGCAAAAAT 58.534 32.000 0.00 0.99 0.00 1.82
2394 4603 8.497554 TGATTTGCTTTTTCAAATATTCAGTGC 58.502 29.630 2.20 0.00 44.15 4.40
2499 4738 7.040823 ACAGGCTTCTTAAGTGATTTTTCTGAG 60.041 37.037 1.63 0.00 0.00 3.35
2502 4741 7.094592 GCTACAGGCTTCTTAAGTGATTTTTCT 60.095 37.037 1.63 0.00 38.06 2.52
2503 4742 7.024171 GCTACAGGCTTCTTAAGTGATTTTTC 58.976 38.462 1.63 0.00 38.06 2.29
2588 4831 9.043079 TCATCAAACTCGTGTAGTAGTAGATAG 57.957 37.037 0.00 0.00 37.50 2.08
2590 4833 7.860918 TCATCAAACTCGTGTAGTAGTAGAT 57.139 36.000 0.00 0.00 37.50 1.98
2594 4837 6.071560 TGGATTCATCAAACTCGTGTAGTAGT 60.072 38.462 0.00 0.00 37.50 2.73
2595 4838 6.330278 TGGATTCATCAAACTCGTGTAGTAG 58.670 40.000 0.00 0.00 37.50 2.57
2599 4842 6.652900 TCATTTGGATTCATCAAACTCGTGTA 59.347 34.615 0.00 0.00 37.00 2.90
2600 4843 5.473162 TCATTTGGATTCATCAAACTCGTGT 59.527 36.000 0.00 0.00 37.00 4.49
2601 4844 5.941733 TCATTTGGATTCATCAAACTCGTG 58.058 37.500 0.00 0.00 37.00 4.35
2602 4845 6.558009 CATCATTTGGATTCATCAAACTCGT 58.442 36.000 0.00 0.00 37.00 4.18
2603 4846 5.457799 GCATCATTTGGATTCATCAAACTCG 59.542 40.000 0.00 0.00 37.00 4.18
2604 4847 5.457799 CGCATCATTTGGATTCATCAAACTC 59.542 40.000 0.00 0.00 37.00 3.01
2605 4848 5.125900 TCGCATCATTTGGATTCATCAAACT 59.874 36.000 0.00 0.00 37.00 2.66
2606 4849 5.342433 TCGCATCATTTGGATTCATCAAAC 58.658 37.500 0.00 0.00 37.00 2.93
2607 4850 5.579564 TCGCATCATTTGGATTCATCAAA 57.420 34.783 0.00 0.00 38.30 2.69
2608 4851 4.498513 GCTCGCATCATTTGGATTCATCAA 60.499 41.667 0.00 0.00 32.57 2.57
2609 4852 3.004002 GCTCGCATCATTTGGATTCATCA 59.996 43.478 0.00 0.00 32.57 3.07
2610 4853 3.004002 TGCTCGCATCATTTGGATTCATC 59.996 43.478 0.00 0.00 32.57 2.92
2611 4854 2.953648 TGCTCGCATCATTTGGATTCAT 59.046 40.909 0.00 0.00 32.57 2.57
2612 4855 2.367486 TGCTCGCATCATTTGGATTCA 58.633 42.857 0.00 0.00 32.57 2.57
2613 4856 3.425577 TTGCTCGCATCATTTGGATTC 57.574 42.857 0.00 0.00 32.57 2.52
2614 4857 3.549423 CGATTGCTCGCATCATTTGGATT 60.549 43.478 0.00 0.00 38.20 3.01
2615 4858 2.031420 CGATTGCTCGCATCATTTGGAT 60.031 45.455 0.00 0.00 38.20 3.41
2616 4859 1.331447 CGATTGCTCGCATCATTTGGA 59.669 47.619 0.00 0.00 38.20 3.53
2617 4860 1.750351 CGATTGCTCGCATCATTTGG 58.250 50.000 0.00 0.00 38.20 3.28
2628 4871 9.944663 TTTTATAAATATGTTCCACGATTGCTC 57.055 29.630 0.00 0.00 0.00 4.26
2633 4876 9.710979 CGTGTTTTTATAAATATGTTCCACGAT 57.289 29.630 16.48 0.00 36.61 3.73
2634 4877 8.933807 TCGTGTTTTTATAAATATGTTCCACGA 58.066 29.630 18.44 18.44 38.90 4.35
2635 4878 9.205916 CTCGTGTTTTTATAAATATGTTCCACG 57.794 33.333 15.85 15.85 36.21 4.94
2655 4898 5.530915 TCATTTGGATTCTTCAAACTCGTGT 59.469 36.000 0.00 0.00 37.00 4.49
2659 4902 8.048534 TCAGATCATTTGGATTCTTCAAACTC 57.951 34.615 0.00 0.00 37.00 3.01
2681 4924 2.900122 ATTGGTTTGCGATCGTTCAG 57.100 45.000 17.81 0.00 0.00 3.02
2685 4928 4.027572 CCATAAATTGGTTTGCGATCGT 57.972 40.909 17.81 0.00 40.99 3.73
2687 4930 4.792704 ATCGCCATAAATTGGTTTGCGATC 60.793 41.667 15.14 0.00 45.66 3.69
2697 4940 5.505173 AGGACTTGAATCGCCATAAATTG 57.495 39.130 0.00 0.00 0.00 2.32
2698 4941 6.119536 TGTAGGACTTGAATCGCCATAAATT 58.880 36.000 0.00 0.00 0.00 1.82
2699 4942 5.680619 TGTAGGACTTGAATCGCCATAAAT 58.319 37.500 0.00 0.00 0.00 1.40
2700 4943 5.092554 TGTAGGACTTGAATCGCCATAAA 57.907 39.130 0.00 0.00 0.00 1.40
2701 4944 4.746535 TGTAGGACTTGAATCGCCATAA 57.253 40.909 0.00 0.00 0.00 1.90
2702 4945 4.955811 ATGTAGGACTTGAATCGCCATA 57.044 40.909 0.00 0.00 0.00 2.74
2703 4946 3.845781 ATGTAGGACTTGAATCGCCAT 57.154 42.857 0.00 0.00 0.00 4.40
2704 4947 3.627395 AATGTAGGACTTGAATCGCCA 57.373 42.857 0.00 0.00 0.00 5.69
2705 4948 3.938963 TCAAATGTAGGACTTGAATCGCC 59.061 43.478 0.00 0.00 0.00 5.54
2706 4949 4.391830 TGTCAAATGTAGGACTTGAATCGC 59.608 41.667 0.00 0.00 35.11 4.58
2707 4950 5.639506 AGTGTCAAATGTAGGACTTGAATCG 59.360 40.000 0.00 0.00 35.11 3.34
2708 4951 6.128172 CCAGTGTCAAATGTAGGACTTGAATC 60.128 42.308 0.00 0.00 35.11 2.52
2709 4952 5.707298 CCAGTGTCAAATGTAGGACTTGAAT 59.293 40.000 0.00 0.00 35.11 2.57
2710 4953 5.063204 CCAGTGTCAAATGTAGGACTTGAA 58.937 41.667 0.00 0.00 35.11 2.69
2711 4954 4.346709 TCCAGTGTCAAATGTAGGACTTGA 59.653 41.667 0.00 0.00 35.11 3.02
2712 4955 4.641396 TCCAGTGTCAAATGTAGGACTTG 58.359 43.478 0.00 0.00 35.11 3.16
2713 4956 4.804261 GCTCCAGTGTCAAATGTAGGACTT 60.804 45.833 0.00 0.00 35.11 3.01
2714 4957 3.307059 GCTCCAGTGTCAAATGTAGGACT 60.307 47.826 0.00 0.00 35.11 3.85
2715 4958 3.003480 GCTCCAGTGTCAAATGTAGGAC 58.997 50.000 0.00 0.00 34.63 3.85
2716 4959 2.906389 AGCTCCAGTGTCAAATGTAGGA 59.094 45.455 0.00 0.00 0.00 2.94
2717 4960 3.265791 GAGCTCCAGTGTCAAATGTAGG 58.734 50.000 0.87 0.00 0.00 3.18
2718 4961 3.930336 TGAGCTCCAGTGTCAAATGTAG 58.070 45.455 12.15 0.00 0.00 2.74
2719 4962 4.558226 ATGAGCTCCAGTGTCAAATGTA 57.442 40.909 12.15 0.00 0.00 2.29
2720 4963 2.936919 TGAGCTCCAGTGTCAAATGT 57.063 45.000 12.15 0.00 0.00 2.71
2721 4964 6.446781 AAATATGAGCTCCAGTGTCAAATG 57.553 37.500 12.15 0.00 0.00 2.32
2722 4965 7.472334 AAAAATATGAGCTCCAGTGTCAAAT 57.528 32.000 12.15 0.00 0.00 2.32
2723 4966 6.899393 AAAAATATGAGCTCCAGTGTCAAA 57.101 33.333 12.15 0.00 0.00 2.69
2745 4988 7.815549 GCGGGAAGGACTGAAATAAATTAAAAA 59.184 33.333 0.00 0.00 0.00 1.94
2746 4989 7.039644 TGCGGGAAGGACTGAAATAAATTAAAA 60.040 33.333 0.00 0.00 0.00 1.52
2747 4990 6.434652 TGCGGGAAGGACTGAAATAAATTAAA 59.565 34.615 0.00 0.00 0.00 1.52
2748 4991 5.946972 TGCGGGAAGGACTGAAATAAATTAA 59.053 36.000 0.00 0.00 0.00 1.40
2749 4992 5.502079 TGCGGGAAGGACTGAAATAAATTA 58.498 37.500 0.00 0.00 0.00 1.40
2750 4993 4.340617 TGCGGGAAGGACTGAAATAAATT 58.659 39.130 0.00 0.00 0.00 1.82
2751 4994 3.963129 TGCGGGAAGGACTGAAATAAAT 58.037 40.909 0.00 0.00 0.00 1.40
2752 4995 3.426787 TGCGGGAAGGACTGAAATAAA 57.573 42.857 0.00 0.00 0.00 1.40
2753 4996 3.426787 TTGCGGGAAGGACTGAAATAA 57.573 42.857 0.00 0.00 0.00 1.40
2754 4997 3.278574 CATTGCGGGAAGGACTGAAATA 58.721 45.455 0.00 0.00 0.00 1.40
2755 4998 2.094675 CATTGCGGGAAGGACTGAAAT 58.905 47.619 0.00 0.00 0.00 2.17
2756 4999 1.202879 ACATTGCGGGAAGGACTGAAA 60.203 47.619 0.00 0.00 0.00 2.69
2757 5000 0.400213 ACATTGCGGGAAGGACTGAA 59.600 50.000 0.00 0.00 0.00 3.02
2758 5001 0.321564 CACATTGCGGGAAGGACTGA 60.322 55.000 0.00 0.00 0.00 3.41
2759 5002 1.926511 GCACATTGCGGGAAGGACTG 61.927 60.000 0.00 0.00 31.71 3.51
2760 5003 1.675641 GCACATTGCGGGAAGGACT 60.676 57.895 0.00 0.00 31.71 3.85
2761 5004 2.877691 GCACATTGCGGGAAGGAC 59.122 61.111 0.00 0.00 31.71 3.85
2770 5013 3.191162 TCCTCACACTAAATGCACATTGC 59.809 43.478 0.00 0.00 45.29 3.56
2771 5014 4.696877 TCTCCTCACACTAAATGCACATTG 59.303 41.667 0.00 0.00 0.00 2.82
2772 5015 4.697352 GTCTCCTCACACTAAATGCACATT 59.303 41.667 0.00 0.00 0.00 2.71
2773 5016 4.256920 GTCTCCTCACACTAAATGCACAT 58.743 43.478 0.00 0.00 0.00 3.21
2774 5017 3.070878 TGTCTCCTCACACTAAATGCACA 59.929 43.478 0.00 0.00 0.00 4.57
2775 5018 3.664107 TGTCTCCTCACACTAAATGCAC 58.336 45.455 0.00 0.00 0.00 4.57
2776 5019 4.558226 ATGTCTCCTCACACTAAATGCA 57.442 40.909 0.00 0.00 0.00 3.96
2777 5020 5.181748 AGAATGTCTCCTCACACTAAATGC 58.818 41.667 0.00 0.00 0.00 3.56
2778 5021 8.954950 ATAAGAATGTCTCCTCACACTAAATG 57.045 34.615 0.00 0.00 0.00 2.32
2779 5022 8.762645 TGATAAGAATGTCTCCTCACACTAAAT 58.237 33.333 0.00 0.00 0.00 1.40
2780 5023 8.134202 TGATAAGAATGTCTCCTCACACTAAA 57.866 34.615 0.00 0.00 0.00 1.85
2781 5024 7.718334 TGATAAGAATGTCTCCTCACACTAA 57.282 36.000 0.00 0.00 0.00 2.24
2782 5025 7.397476 AGTTGATAAGAATGTCTCCTCACACTA 59.603 37.037 0.00 0.00 0.00 2.74
2783 5026 6.212388 AGTTGATAAGAATGTCTCCTCACACT 59.788 38.462 0.00 0.00 0.00 3.55
2784 5027 6.402222 AGTTGATAAGAATGTCTCCTCACAC 58.598 40.000 0.00 0.00 0.00 3.82
2785 5028 6.611613 AGTTGATAAGAATGTCTCCTCACA 57.388 37.500 0.00 0.00 0.00 3.58
2786 5029 8.001881 TCTAGTTGATAAGAATGTCTCCTCAC 57.998 38.462 0.00 0.00 0.00 3.51
2787 5030 8.595362 TTCTAGTTGATAAGAATGTCTCCTCA 57.405 34.615 0.00 0.00 0.00 3.86
2788 5031 9.877178 TTTTCTAGTTGATAAGAATGTCTCCTC 57.123 33.333 0.00 0.00 32.05 3.71
2808 5051 9.651913 GGCAAAATCATCATAAACCTTTTTCTA 57.348 29.630 0.00 0.00 0.00 2.10
2809 5052 8.156165 TGGCAAAATCATCATAAACCTTTTTCT 58.844 29.630 0.00 0.00 0.00 2.52
2810 5053 8.321650 TGGCAAAATCATCATAAACCTTTTTC 57.678 30.769 0.00 0.00 0.00 2.29
2811 5054 8.688747 TTGGCAAAATCATCATAAACCTTTTT 57.311 26.923 0.00 0.00 0.00 1.94
2812 5055 8.866970 ATTGGCAAAATCATCATAAACCTTTT 57.133 26.923 3.01 0.00 0.00 2.27
2813 5056 8.323567 AGATTGGCAAAATCATCATAAACCTTT 58.676 29.630 3.01 0.00 0.00 3.11
2814 5057 7.854337 AGATTGGCAAAATCATCATAAACCTT 58.146 30.769 3.01 0.00 0.00 3.50
2815 5058 7.427989 AGATTGGCAAAATCATCATAAACCT 57.572 32.000 3.01 0.00 0.00 3.50
2816 5059 9.598517 TTTAGATTGGCAAAATCATCATAAACC 57.401 29.630 3.01 0.00 0.00 3.27
2822 5065 9.806203 CATTACTTTAGATTGGCAAAATCATCA 57.194 29.630 3.01 0.00 0.00 3.07
2823 5066 9.807649 ACATTACTTTAGATTGGCAAAATCATC 57.192 29.630 3.01 0.00 0.00 2.92
2824 5067 9.590451 CACATTACTTTAGATTGGCAAAATCAT 57.410 29.630 3.01 0.00 0.00 2.45
2825 5068 8.584157 ACACATTACTTTAGATTGGCAAAATCA 58.416 29.630 3.01 0.00 0.00 2.57
2826 5069 8.986477 ACACATTACTTTAGATTGGCAAAATC 57.014 30.769 3.01 0.00 0.00 2.17
2827 5070 7.754924 CGACACATTACTTTAGATTGGCAAAAT 59.245 33.333 3.01 0.00 0.00 1.82
2828 5071 7.081349 CGACACATTACTTTAGATTGGCAAAA 58.919 34.615 3.01 0.00 0.00 2.44
2829 5072 6.348950 CCGACACATTACTTTAGATTGGCAAA 60.349 38.462 3.01 0.00 0.00 3.68
2830 5073 5.123186 CCGACACATTACTTTAGATTGGCAA 59.877 40.000 0.68 0.68 0.00 4.52
2831 5074 4.634004 CCGACACATTACTTTAGATTGGCA 59.366 41.667 0.00 0.00 0.00 4.92
2832 5075 4.495844 GCCGACACATTACTTTAGATTGGC 60.496 45.833 0.00 0.00 0.00 4.52
2833 5076 4.876107 AGCCGACACATTACTTTAGATTGG 59.124 41.667 0.00 0.00 0.00 3.16
2834 5077 5.580691 TGAGCCGACACATTACTTTAGATTG 59.419 40.000 0.00 0.00 0.00 2.67
2835 5078 5.730550 TGAGCCGACACATTACTTTAGATT 58.269 37.500 0.00 0.00 0.00 2.40
2836 5079 5.127194 TCTGAGCCGACACATTACTTTAGAT 59.873 40.000 0.00 0.00 0.00 1.98
2837 5080 4.461431 TCTGAGCCGACACATTACTTTAGA 59.539 41.667 0.00 0.00 0.00 2.10
2838 5081 4.563184 GTCTGAGCCGACACATTACTTTAG 59.437 45.833 0.00 0.00 34.11 1.85
2839 5082 4.021807 TGTCTGAGCCGACACATTACTTTA 60.022 41.667 0.00 0.00 38.89 1.85
2840 5083 3.244078 TGTCTGAGCCGACACATTACTTT 60.244 43.478 0.00 0.00 38.89 2.66
2841 5084 2.299013 TGTCTGAGCCGACACATTACTT 59.701 45.455 0.00 0.00 38.89 2.24
2842 5085 1.893137 TGTCTGAGCCGACACATTACT 59.107 47.619 0.00 0.00 38.89 2.24
2843 5086 2.363788 TGTCTGAGCCGACACATTAC 57.636 50.000 0.00 0.00 38.89 1.89
2844 5087 3.521560 GATTGTCTGAGCCGACACATTA 58.478 45.455 1.08 0.00 43.11 1.90
2845 5088 2.350522 GATTGTCTGAGCCGACACATT 58.649 47.619 1.08 0.00 43.11 2.71
2846 5089 1.737029 CGATTGTCTGAGCCGACACAT 60.737 52.381 1.08 0.26 43.11 3.21
2847 5090 0.388520 CGATTGTCTGAGCCGACACA 60.389 55.000 1.08 0.00 43.11 3.72
2848 5091 0.109272 TCGATTGTCTGAGCCGACAC 60.109 55.000 1.08 0.00 43.11 3.67
2849 5092 0.601057 TTCGATTGTCTGAGCCGACA 59.399 50.000 0.00 0.00 41.82 4.35
2850 5093 1.135373 TCTTCGATTGTCTGAGCCGAC 60.135 52.381 0.00 0.00 34.52 4.79
2851 5094 1.173913 TCTTCGATTGTCTGAGCCGA 58.826 50.000 0.00 0.00 0.00 5.54
2852 5095 1.857217 CATCTTCGATTGTCTGAGCCG 59.143 52.381 0.00 0.00 0.00 5.52
2853 5096 1.596727 GCATCTTCGATTGTCTGAGCC 59.403 52.381 0.00 0.00 0.00 4.70
2854 5097 2.539274 GAGCATCTTCGATTGTCTGAGC 59.461 50.000 0.00 0.00 0.00 4.26
2855 5098 3.778618 TGAGCATCTTCGATTGTCTGAG 58.221 45.455 0.00 0.00 34.92 3.35
2856 5099 3.874392 TGAGCATCTTCGATTGTCTGA 57.126 42.857 0.00 0.00 34.92 3.27
2857 5100 4.685165 CCTATGAGCATCTTCGATTGTCTG 59.315 45.833 0.00 0.00 34.92 3.51
2858 5101 4.262377 CCCTATGAGCATCTTCGATTGTCT 60.262 45.833 0.00 0.00 34.92 3.41
2859 5102 3.993081 CCCTATGAGCATCTTCGATTGTC 59.007 47.826 0.00 0.00 34.92 3.18
2860 5103 3.244353 CCCCTATGAGCATCTTCGATTGT 60.244 47.826 0.00 0.00 34.92 2.71
2861 5104 3.244353 ACCCCTATGAGCATCTTCGATTG 60.244 47.826 0.00 0.00 34.92 2.67
2862 5105 2.975489 ACCCCTATGAGCATCTTCGATT 59.025 45.455 0.00 0.00 34.92 3.34
2863 5106 2.614259 ACCCCTATGAGCATCTTCGAT 58.386 47.619 0.00 0.00 34.92 3.59
2864 5107 2.088104 ACCCCTATGAGCATCTTCGA 57.912 50.000 0.00 0.00 34.92 3.71
2865 5108 2.628178 TGTACCCCTATGAGCATCTTCG 59.372 50.000 0.00 0.00 34.92 3.79
2866 5109 3.643792 AGTGTACCCCTATGAGCATCTTC 59.356 47.826 0.00 0.00 34.92 2.87
2867 5110 3.658725 AGTGTACCCCTATGAGCATCTT 58.341 45.455 0.00 0.00 34.92 2.40
2868 5111 3.336509 AGTGTACCCCTATGAGCATCT 57.663 47.619 0.00 0.00 34.92 2.90
2869 5112 4.621747 GCATAGTGTACCCCTATGAGCATC 60.622 50.000 23.64 9.50 42.82 3.91
2870 5113 3.261897 GCATAGTGTACCCCTATGAGCAT 59.738 47.826 23.64 0.00 42.82 3.79
2871 5114 2.632996 GCATAGTGTACCCCTATGAGCA 59.367 50.000 23.64 0.00 42.82 4.26
2872 5115 2.632996 TGCATAGTGTACCCCTATGAGC 59.367 50.000 23.64 14.62 42.82 4.26
2873 5116 4.284490 ACATGCATAGTGTACCCCTATGAG 59.716 45.833 23.64 16.98 42.82 2.90
2874 5117 4.040339 CACATGCATAGTGTACCCCTATGA 59.960 45.833 23.64 14.02 42.82 2.15
2875 5118 4.318332 CACATGCATAGTGTACCCCTATG 58.682 47.826 18.54 18.54 42.97 2.23
2876 5119 4.623932 CACATGCATAGTGTACCCCTAT 57.376 45.455 16.46 0.00 32.44 2.57
2885 5128 4.690184 ATGAACACACACATGCATAGTG 57.310 40.909 22.79 22.79 42.56 2.74
2886 5129 4.877823 CCTATGAACACACACATGCATAGT 59.122 41.667 0.00 0.00 35.59 2.12
2887 5130 4.274214 CCCTATGAACACACACATGCATAG 59.726 45.833 0.00 0.00 36.56 2.23
2888 5131 4.198530 CCCTATGAACACACACATGCATA 58.801 43.478 0.00 0.00 0.00 3.14
2889 5132 3.018856 CCCTATGAACACACACATGCAT 58.981 45.455 0.00 0.00 0.00 3.96
2890 5133 2.224744 ACCCTATGAACACACACATGCA 60.225 45.455 0.00 0.00 0.00 3.96
2891 5134 2.162208 CACCCTATGAACACACACATGC 59.838 50.000 0.00 0.00 0.00 4.06
2892 5135 3.673902 TCACCCTATGAACACACACATG 58.326 45.455 0.00 0.00 33.02 3.21
2893 5136 4.019411 TCATCACCCTATGAACACACACAT 60.019 41.667 0.00 0.00 41.93 3.21
2894 5137 3.326297 TCATCACCCTATGAACACACACA 59.674 43.478 0.00 0.00 41.93 3.72
2895 5138 3.935203 CTCATCACCCTATGAACACACAC 59.065 47.826 0.00 0.00 41.93 3.82
2896 5139 3.582647 ACTCATCACCCTATGAACACACA 59.417 43.478 0.00 0.00 41.93 3.72
2897 5140 3.935203 CACTCATCACCCTATGAACACAC 59.065 47.826 0.00 0.00 41.93 3.82
2898 5141 3.582647 ACACTCATCACCCTATGAACACA 59.417 43.478 0.00 0.00 41.93 3.72
2899 5142 4.207891 ACACTCATCACCCTATGAACAC 57.792 45.455 0.00 0.00 41.93 3.32
2900 5143 4.908601 AACACTCATCACCCTATGAACA 57.091 40.909 0.00 0.00 41.93 3.18
2901 5144 5.003804 ACAAACACTCATCACCCTATGAAC 58.996 41.667 0.00 0.00 41.93 3.18
2902 5145 5.241403 ACAAACACTCATCACCCTATGAA 57.759 39.130 0.00 0.00 41.93 2.57
2903 5146 4.908601 ACAAACACTCATCACCCTATGA 57.091 40.909 0.00 0.00 43.13 2.15
2904 5147 5.582269 CAGTACAAACACTCATCACCCTATG 59.418 44.000 0.00 0.00 0.00 2.23
2905 5148 5.248477 ACAGTACAAACACTCATCACCCTAT 59.752 40.000 0.00 0.00 0.00 2.57
2906 5149 4.591498 ACAGTACAAACACTCATCACCCTA 59.409 41.667 0.00 0.00 0.00 3.53
2907 5150 3.391296 ACAGTACAAACACTCATCACCCT 59.609 43.478 0.00 0.00 0.00 4.34
2908 5151 3.498397 CACAGTACAAACACTCATCACCC 59.502 47.826 0.00 0.00 0.00 4.61
2909 5152 4.127171 ACACAGTACAAACACTCATCACC 58.873 43.478 0.00 0.00 0.00 4.02
2910 5153 5.734855 AACACAGTACAAACACTCATCAC 57.265 39.130 0.00 0.00 0.00 3.06
2911 5154 7.766738 TCTTTAACACAGTACAAACACTCATCA 59.233 33.333 0.00 0.00 0.00 3.07
2912 5155 8.138365 TCTTTAACACAGTACAAACACTCATC 57.862 34.615 0.00 0.00 0.00 2.92
2913 5156 8.500753 TTCTTTAACACAGTACAAACACTCAT 57.499 30.769 0.00 0.00 0.00 2.90
2914 5157 7.908827 TTCTTTAACACAGTACAAACACTCA 57.091 32.000 0.00 0.00 0.00 3.41
2915 5158 9.058424 GTTTTCTTTAACACAGTACAAACACTC 57.942 33.333 0.00 0.00 0.00 3.51
2916 5159 8.789762 AGTTTTCTTTAACACAGTACAAACACT 58.210 29.630 0.00 0.00 0.00 3.55
2917 5160 8.959734 AGTTTTCTTTAACACAGTACAAACAC 57.040 30.769 0.00 0.00 0.00 3.32
2918 5161 8.238631 GGAGTTTTCTTTAACACAGTACAAACA 58.761 33.333 0.00 0.00 0.00 2.83
2919 5162 8.238631 TGGAGTTTTCTTTAACACAGTACAAAC 58.761 33.333 0.00 0.00 0.00 2.93
2920 5163 8.338072 TGGAGTTTTCTTTAACACAGTACAAA 57.662 30.769 0.00 0.00 0.00 2.83
2921 5164 7.925043 TGGAGTTTTCTTTAACACAGTACAA 57.075 32.000 0.00 0.00 0.00 2.41
2922 5165 7.925043 TTGGAGTTTTCTTTAACACAGTACA 57.075 32.000 0.00 0.00 0.00 2.90
2923 5166 9.797556 ATTTTGGAGTTTTCTTTAACACAGTAC 57.202 29.630 0.00 0.00 0.00 2.73
2932 5175 9.582648 AGGCTAGTAATTTTGGAGTTTTCTTTA 57.417 29.630 0.00 0.00 0.00 1.85
2933 5176 8.478775 AGGCTAGTAATTTTGGAGTTTTCTTT 57.521 30.769 0.00 0.00 0.00 2.52
2934 5177 7.724061 TGAGGCTAGTAATTTTGGAGTTTTCTT 59.276 33.333 0.00 0.00 0.00 2.52
2935 5178 7.231467 TGAGGCTAGTAATTTTGGAGTTTTCT 58.769 34.615 0.00 0.00 0.00 2.52
2936 5179 7.448748 TGAGGCTAGTAATTTTGGAGTTTTC 57.551 36.000 0.00 0.00 0.00 2.29
2937 5180 7.093771 CCATGAGGCTAGTAATTTTGGAGTTTT 60.094 37.037 0.00 0.00 0.00 2.43
2938 5181 6.378280 CCATGAGGCTAGTAATTTTGGAGTTT 59.622 38.462 0.00 0.00 0.00 2.66
2939 5182 5.888161 CCATGAGGCTAGTAATTTTGGAGTT 59.112 40.000 0.00 0.00 0.00 3.01
2940 5183 5.191722 TCCATGAGGCTAGTAATTTTGGAGT 59.808 40.000 0.00 0.00 33.74 3.85
2941 5184 5.529060 GTCCATGAGGCTAGTAATTTTGGAG 59.471 44.000 0.00 0.00 31.77 3.86
2942 5185 5.045213 TGTCCATGAGGCTAGTAATTTTGGA 60.045 40.000 0.00 0.00 33.74 3.53
2943 5186 5.192927 TGTCCATGAGGCTAGTAATTTTGG 58.807 41.667 0.00 0.00 33.74 3.28
2944 5187 6.732154 CATGTCCATGAGGCTAGTAATTTTG 58.268 40.000 0.87 0.00 41.20 2.44
2945 5188 5.300286 GCATGTCCATGAGGCTAGTAATTTT 59.700 40.000 11.35 0.00 41.20 1.82
2946 5189 4.823989 GCATGTCCATGAGGCTAGTAATTT 59.176 41.667 11.35 0.00 41.20 1.82
2947 5190 4.141413 TGCATGTCCATGAGGCTAGTAATT 60.141 41.667 11.35 0.00 41.20 1.40
2948 5191 3.392285 TGCATGTCCATGAGGCTAGTAAT 59.608 43.478 11.35 0.00 41.20 1.89
2949 5192 2.771372 TGCATGTCCATGAGGCTAGTAA 59.229 45.455 11.35 0.00 41.20 2.24
2950 5193 2.397597 TGCATGTCCATGAGGCTAGTA 58.602 47.619 11.35 0.00 41.20 1.82
2951 5194 1.206878 TGCATGTCCATGAGGCTAGT 58.793 50.000 11.35 0.00 41.20 2.57
2952 5195 2.336945 TTGCATGTCCATGAGGCTAG 57.663 50.000 11.35 0.00 41.20 3.42
2953 5196 2.804986 TTTGCATGTCCATGAGGCTA 57.195 45.000 11.35 0.00 41.20 3.93
2954 5197 1.927487 TTTTGCATGTCCATGAGGCT 58.073 45.000 11.35 0.00 41.20 4.58
2955 5198 2.747396 TTTTTGCATGTCCATGAGGC 57.253 45.000 11.35 0.00 41.20 4.70
2971 5214 4.160252 AGCTCGGTATTCATTGGCATTTTT 59.840 37.500 0.00 0.00 0.00 1.94
2972 5215 3.701040 AGCTCGGTATTCATTGGCATTTT 59.299 39.130 0.00 0.00 0.00 1.82
2973 5216 3.290710 AGCTCGGTATTCATTGGCATTT 58.709 40.909 0.00 0.00 0.00 2.32
2974 5217 2.880890 GAGCTCGGTATTCATTGGCATT 59.119 45.455 0.00 0.00 0.00 3.56
2975 5218 2.498167 GAGCTCGGTATTCATTGGCAT 58.502 47.619 0.00 0.00 0.00 4.40
2976 5219 1.475034 GGAGCTCGGTATTCATTGGCA 60.475 52.381 7.83 0.00 0.00 4.92
2977 5220 1.230324 GGAGCTCGGTATTCATTGGC 58.770 55.000 7.83 0.00 0.00 4.52
2978 5221 2.158900 ACTGGAGCTCGGTATTCATTGG 60.159 50.000 7.83 0.00 32.15 3.16
2979 5222 2.868583 CACTGGAGCTCGGTATTCATTG 59.131 50.000 7.83 0.00 32.77 2.82
2980 5223 2.766263 TCACTGGAGCTCGGTATTCATT 59.234 45.455 7.83 0.00 32.77 2.57
2981 5224 2.363680 CTCACTGGAGCTCGGTATTCAT 59.636 50.000 7.83 0.00 33.67 2.57
2982 5225 1.751351 CTCACTGGAGCTCGGTATTCA 59.249 52.381 7.83 0.00 33.67 2.57
2983 5226 2.500509 CTCACTGGAGCTCGGTATTC 57.499 55.000 7.83 0.00 33.67 1.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.