Multiple sequence alignment - TraesCS1B01G084700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G084700 chr1B 100.000 5088 0 0 1 5088 69539203 69544290 0.000000e+00 9396.0
1 TraesCS1B01G084700 chr1B 85.448 268 32 5 998 1263 163100380 163100118 6.490000e-69 272.0
2 TraesCS1B01G084700 chr1A 91.727 2623 132 43 2361 4980 48980919 48983459 0.000000e+00 3563.0
3 TraesCS1B01G084700 chr1A 88.384 1386 80 28 1 1376 48978661 48979975 0.000000e+00 1592.0
4 TraesCS1B01G084700 chr1A 85.968 506 40 13 1382 1874 48980011 48980498 3.510000e-141 512.0
5 TraesCS1B01G084700 chr1A 84.701 268 34 5 998 1263 101767630 101767368 1.410000e-65 261.0
6 TraesCS1B01G084700 chr1A 87.919 149 11 2 2221 2362 48980667 48980815 8.760000e-38 169.0
7 TraesCS1B01G084700 chr1D 95.538 1860 66 5 2442 4300 49420836 49422679 0.000000e+00 2959.0
8 TraesCS1B01G084700 chr1D 90.217 2167 127 37 1 2139 49417865 49419974 0.000000e+00 2748.0
9 TraesCS1B01G084700 chr1D 85.827 508 44 13 1382 1875 49419976 49420469 9.770000e-142 514.0
10 TraesCS1B01G084700 chr1D 94.969 159 8 0 2221 2379 49420671 49420829 3.040000e-62 250.0
11 TraesCS1B01G084700 chr1D 92.079 101 7 1 4788 4888 49423091 49423190 1.910000e-29 141.0
12 TraesCS1B01G084700 chr6A 88.889 234 22 2 1902 2131 109384948 109384715 8.340000e-73 285.0
13 TraesCS1B01G084700 chr2A 85.433 254 32 4 1863 2115 493408649 493408400 5.050000e-65 259.0
14 TraesCS1B01G084700 chr2A 87.059 85 8 3 4788 4870 231349850 231349933 5.420000e-15 93.5
15 TraesCS1B01G084700 chr5D 85.271 258 29 7 1878 2131 113741610 113741358 1.820000e-64 257.0
16 TraesCS1B01G084700 chr5D 84.411 263 30 6 1872 2129 500447748 500448004 1.090000e-61 248.0
17 TraesCS1B01G084700 chr3D 85.657 251 27 9 1872 2117 942562 942316 6.540000e-64 255.0
18 TraesCS1B01G084700 chr3D 83.835 266 40 3 1866 2129 54981542 54981806 3.040000e-62 250.0
19 TraesCS1B01G084700 chr2B 83.806 247 34 3 1863 2108 433932845 433932604 3.960000e-56 230.0
20 TraesCS1B01G084700 chr2B 87.059 85 8 3 4788 4870 256951928 256952011 5.420000e-15 93.5
21 TraesCS1B01G084700 chr5A 82.397 267 32 7 1872 2131 626975042 626975300 8.580000e-53 219.0
22 TraesCS1B01G084700 chr5A 88.095 84 7 3 4788 4870 467577927 467578008 4.190000e-16 97.1
23 TraesCS1B01G084700 chr5A 75.845 207 28 10 4559 4749 520669097 520668897 9.080000e-13 86.1
24 TraesCS1B01G084700 chr7B 91.667 84 5 2 4788 4870 275461403 275461321 1.160000e-21 115.0
25 TraesCS1B01G084700 chr7A 91.667 84 5 2 4788 4870 323433874 323433956 1.160000e-21 115.0
26 TraesCS1B01G084700 chr7D 89.286 84 7 2 4788 4870 285229145 285229227 2.510000e-18 104.0
27 TraesCS1B01G084700 chr6D 89.286 84 7 2 4788 4870 141132108 141132190 2.510000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G084700 chr1B 69539203 69544290 5087 False 9396.0 9396 100.0000 1 5088 1 chr1B.!!$F1 5087
1 TraesCS1B01G084700 chr1A 48978661 48983459 4798 False 1459.0 3563 88.4995 1 4980 4 chr1A.!!$F1 4979
2 TraesCS1B01G084700 chr1D 49417865 49423190 5325 False 1322.4 2959 91.7260 1 4888 5 chr1D.!!$F1 4887

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
997 1014 0.322906 GGAAACAGAGGAAGGCAGGG 60.323 60.0 0.0 0.0 0.0 4.45 F
1889 1958 0.172803 GTACTCGCTCCATTCCACGT 59.827 55.0 0.0 0.0 0.0 4.49 F
2456 3266 0.677842 ACACGGAACAGTAGGTCCAC 59.322 55.0 0.0 0.0 0.0 4.02 F
3829 4641 0.109132 GAGTTGGCAAATTCCCGCTG 60.109 55.0 0.0 0.0 0.0 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2165 2762 0.771127 TCTGGTCAACTCTTTGGGGG 59.229 55.000 0.00 0.0 33.06 5.40 R
3454 4266 0.035725 CAAGGATGCTCTGCTCACCA 60.036 55.000 0.00 0.0 0.00 4.17 R
3916 4728 1.297819 CTGCGCCATTATGTGCACG 60.298 57.895 13.13 0.0 46.07 5.34 R
4983 5828 0.179000 CGAGCATGGCTAAGGGAAGT 59.821 55.000 0.00 0.0 39.88 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 60 5.186409 ACCCATTGACAAATCTCTTGATTGG 59.814 40.000 0.00 0.00 41.62 3.16
61 67 6.037786 ACAAATCTCTTGATTGGTCTCGTA 57.962 37.500 0.00 0.00 41.64 3.43
68 74 0.855349 GATTGGTCTCGTATGCTGCG 59.145 55.000 0.00 0.00 0.00 5.18
90 96 5.751028 GCGTCAGCTATTTAGACTTGAAGAT 59.249 40.000 0.00 0.00 41.01 2.40
198 204 1.816835 TGCGACTCTGATTACGTCCTT 59.183 47.619 0.00 0.00 0.00 3.36
210 216 0.981183 ACGTCCTTGCCCACTATCAA 59.019 50.000 0.00 0.00 0.00 2.57
282 288 2.400399 GCGGTATGCTGCGAATAACTA 58.600 47.619 0.00 0.00 41.73 2.24
333 343 6.418226 GCAAGGACGTGATAGATTAGTTAGTG 59.582 42.308 0.00 0.00 0.00 2.74
346 356 7.193595 AGATTAGTTAGTGTTGTTGTTGTTGC 58.806 34.615 0.00 0.00 0.00 4.17
358 368 2.064762 TGTTGTTGCTGTTGTTGTTGC 58.935 42.857 0.00 0.00 0.00 4.17
361 371 0.646895 GTTGCTGTTGTTGTTGCTGC 59.353 50.000 0.00 0.00 0.00 5.25
370 380 1.077140 TTGTTGCTGCTGGTGGTGA 60.077 52.632 0.00 0.00 0.00 4.02
372 382 1.174078 TGTTGCTGCTGGTGGTGATG 61.174 55.000 0.00 0.00 0.00 3.07
373 383 1.151221 TTGCTGCTGGTGGTGATGT 59.849 52.632 0.00 0.00 0.00 3.06
374 384 0.467844 TTGCTGCTGGTGGTGATGTT 60.468 50.000 0.00 0.00 0.00 2.71
375 385 1.174078 TGCTGCTGGTGGTGATGTTG 61.174 55.000 0.00 0.00 0.00 3.33
376 386 1.174712 GCTGCTGGTGGTGATGTTGT 61.175 55.000 0.00 0.00 0.00 3.32
377 387 0.877071 CTGCTGGTGGTGATGTTGTC 59.123 55.000 0.00 0.00 0.00 3.18
496 508 1.847818 TCGTTTCACGGAAGAGTGTG 58.152 50.000 0.00 0.00 42.81 3.82
497 509 1.135527 TCGTTTCACGGAAGAGTGTGT 59.864 47.619 0.00 0.00 42.81 3.72
498 510 1.521423 CGTTTCACGGAAGAGTGTGTC 59.479 52.381 0.00 0.00 42.40 3.67
499 511 1.521423 GTTTCACGGAAGAGTGTGTCG 59.479 52.381 0.00 0.00 42.40 4.35
500 512 1.026584 TTCACGGAAGAGTGTGTCGA 58.973 50.000 0.00 0.00 42.40 4.20
501 513 1.244816 TCACGGAAGAGTGTGTCGAT 58.755 50.000 0.00 0.00 42.40 3.59
502 514 1.199327 TCACGGAAGAGTGTGTCGATC 59.801 52.381 0.00 0.00 42.40 3.69
503 515 0.526662 ACGGAAGAGTGTGTCGATCC 59.473 55.000 0.00 0.00 34.38 3.36
504 516 0.526211 CGGAAGAGTGTGTCGATCCA 59.474 55.000 0.00 0.00 36.39 3.41
506 518 2.544685 GGAAGAGTGTGTCGATCCATG 58.455 52.381 0.00 0.00 36.53 3.66
507 519 2.093973 GGAAGAGTGTGTCGATCCATGT 60.094 50.000 0.00 0.00 36.53 3.21
508 520 3.130516 GGAAGAGTGTGTCGATCCATGTA 59.869 47.826 0.00 0.00 36.53 2.29
509 521 4.381612 GGAAGAGTGTGTCGATCCATGTAA 60.382 45.833 0.00 0.00 36.53 2.41
510 522 4.801330 AGAGTGTGTCGATCCATGTAAA 57.199 40.909 0.00 0.00 0.00 2.01
527 539 9.253832 TCCATGTAAAATATGGATGTTGTTCTT 57.746 29.630 2.73 0.00 46.84 2.52
544 556 9.567848 TGTTGTTCTTAAATGAGACTTTGAAAC 57.432 29.630 0.00 0.00 0.00 2.78
585 597 7.427606 CGATCTTGAGCTTTTCATATGTTTGTC 59.572 37.037 1.90 0.00 35.27 3.18
595 607 3.389656 TCATATGTTTGTCCCCAGCGATA 59.610 43.478 1.90 0.00 0.00 2.92
598 610 2.156098 TGTTTGTCCCCAGCGATAAAC 58.844 47.619 4.57 4.57 41.57 2.01
600 612 2.396590 TTGTCCCCAGCGATAAACTC 57.603 50.000 0.00 0.00 0.00 3.01
648 660 8.652810 ACTCAAAATTTTCAACTTGAGAATGG 57.347 30.769 17.89 3.13 44.93 3.16
656 668 6.968131 TTCAACTTGAGAATGGTAGATTCG 57.032 37.500 0.00 0.00 33.51 3.34
657 669 5.419542 TCAACTTGAGAATGGTAGATTCGG 58.580 41.667 0.00 0.00 33.51 4.30
667 679 1.940613 GGTAGATTCGGCGAAAATGCT 59.059 47.619 27.40 21.14 34.52 3.79
669 681 0.734889 AGATTCGGCGAAAATGCTGG 59.265 50.000 27.40 0.00 41.67 4.85
704 716 3.358118 TGATTGAATGAGAAGCATGCCA 58.642 40.909 15.66 5.32 37.28 4.92
707 719 2.028876 TGAATGAGAAGCATGCCATGG 58.971 47.619 15.66 7.63 37.28 3.66
722 734 3.071874 CCATGGTTTTCAGTGGCTCTA 57.928 47.619 2.57 0.00 0.00 2.43
735 747 6.010850 TCAGTGGCTCTAAAAGAGAAGTAGA 58.989 40.000 8.11 0.00 45.07 2.59
959 976 2.113986 GCCATAGGCGCTTCCCAT 59.886 61.111 7.64 0.00 39.62 4.00
990 1007 4.141801 TGTCGAAGAAAGGAAACAGAGGAA 60.142 41.667 0.00 0.00 39.69 3.36
991 1008 4.449405 GTCGAAGAAAGGAAACAGAGGAAG 59.551 45.833 0.00 0.00 39.69 3.46
992 1009 3.748568 CGAAGAAAGGAAACAGAGGAAGG 59.251 47.826 0.00 0.00 0.00 3.46
993 1010 3.147553 AGAAAGGAAACAGAGGAAGGC 57.852 47.619 0.00 0.00 0.00 4.35
994 1011 2.443255 AGAAAGGAAACAGAGGAAGGCA 59.557 45.455 0.00 0.00 0.00 4.75
995 1012 2.575805 AAGGAAACAGAGGAAGGCAG 57.424 50.000 0.00 0.00 0.00 4.85
996 1013 0.695347 AGGAAACAGAGGAAGGCAGG 59.305 55.000 0.00 0.00 0.00 4.85
997 1014 0.322906 GGAAACAGAGGAAGGCAGGG 60.323 60.000 0.00 0.00 0.00 4.45
1245 1268 3.934391 GACCTGCCTCAACGTCGGG 62.934 68.421 0.00 0.00 0.00 5.14
1268 1291 1.565759 CATCCCCTCCAAGGTGATTGA 59.434 52.381 0.00 0.00 41.83 2.57
1269 1292 1.985622 TCCCCTCCAAGGTGATTGAT 58.014 50.000 0.00 0.00 41.83 2.57
1270 1293 2.287584 TCCCCTCCAAGGTGATTGATT 58.712 47.619 0.00 0.00 41.83 2.57
1271 1294 2.654385 TCCCCTCCAAGGTGATTGATTT 59.346 45.455 0.00 0.00 41.83 2.17
1272 1295 3.077391 TCCCCTCCAAGGTGATTGATTTT 59.923 43.478 0.00 0.00 41.83 1.82
1273 1296 3.196254 CCCCTCCAAGGTGATTGATTTTG 59.804 47.826 0.00 0.00 41.83 2.44
1282 1305 6.276832 AGGTGATTGATTTTGATTGACTGG 57.723 37.500 0.00 0.00 0.00 4.00
1283 1306 5.776716 AGGTGATTGATTTTGATTGACTGGT 59.223 36.000 0.00 0.00 0.00 4.00
1350 1376 1.733399 GAGGTGACGCCGACTGTTC 60.733 63.158 0.00 0.00 43.70 3.18
1366 1392 4.428209 ACTGTTCTTAGATCTGTGATGCG 58.572 43.478 5.18 0.00 0.00 4.73
1380 1406 5.465390 TCTGTGATGCGTGGCTATTAATTAC 59.535 40.000 0.00 0.00 0.00 1.89
1381 1407 5.364778 TGTGATGCGTGGCTATTAATTACT 58.635 37.500 0.00 0.00 0.00 2.24
1383 1409 6.645003 TGTGATGCGTGGCTATTAATTACTAG 59.355 38.462 5.67 5.67 0.00 2.57
1384 1410 6.090898 GTGATGCGTGGCTATTAATTACTAGG 59.909 42.308 10.79 0.00 0.00 3.02
1386 1412 5.920903 TGCGTGGCTATTAATTACTAGGTT 58.079 37.500 10.79 0.00 0.00 3.50
1387 1413 5.987347 TGCGTGGCTATTAATTACTAGGTTC 59.013 40.000 10.79 0.00 0.00 3.62
1407 1463 1.382419 CTTGTCGTTCGTTGTAGCTCG 59.618 52.381 0.00 0.00 0.00 5.03
1413 1469 0.942410 TTCGTTGTAGCTCGTGTGGC 60.942 55.000 0.00 0.00 0.00 5.01
1417 1473 1.218875 TTGTAGCTCGTGTGGCGTTG 61.219 55.000 0.00 0.00 42.13 4.10
1429 1485 4.619336 CGTGTGGCGTTGCTTTTATTAATT 59.381 37.500 0.00 0.00 35.54 1.40
1430 1486 5.442649 CGTGTGGCGTTGCTTTTATTAATTG 60.443 40.000 0.00 0.00 35.54 2.32
1431 1487 5.631512 GTGTGGCGTTGCTTTTATTAATTGA 59.368 36.000 0.00 0.00 0.00 2.57
1432 1488 6.310224 GTGTGGCGTTGCTTTTATTAATTGAT 59.690 34.615 0.00 0.00 0.00 2.57
1433 1489 6.870965 TGTGGCGTTGCTTTTATTAATTGATT 59.129 30.769 0.00 0.00 0.00 2.57
1434 1490 7.148672 TGTGGCGTTGCTTTTATTAATTGATTG 60.149 33.333 0.00 0.00 0.00 2.67
1435 1491 7.062839 GTGGCGTTGCTTTTATTAATTGATTGA 59.937 33.333 0.00 0.00 0.00 2.57
1475 1534 3.191162 GCCTGTTTGTGATGCATCAACTA 59.809 43.478 30.24 16.83 38.75 2.24
1503 1562 0.679640 CAGCGGGGTAGCATTTTGGA 60.680 55.000 0.00 0.00 40.15 3.53
1509 1572 3.433031 CGGGGTAGCATTTTGGACTATGA 60.433 47.826 0.00 0.00 0.00 2.15
1511 1574 4.953579 GGGGTAGCATTTTGGACTATGAAA 59.046 41.667 0.00 0.00 0.00 2.69
1527 1590 6.164176 ACTATGAAACTAGGGTTTGAGTTCG 58.836 40.000 0.00 0.00 44.58 3.95
1548 1611 3.181506 CGCTTGATTAGAGGTCTTTTGCC 60.182 47.826 0.00 0.00 0.00 4.52
1551 1614 5.590259 GCTTGATTAGAGGTCTTTTGCCATA 59.410 40.000 0.00 0.00 0.00 2.74
1555 1618 8.034313 TGATTAGAGGTCTTTTGCCATATACT 57.966 34.615 0.00 0.00 0.00 2.12
1591 1655 8.049117 AGAGGTCTTATGCATTATCTTTTGTGA 58.951 33.333 3.54 0.00 0.00 3.58
1719 1783 1.469703 TCCAACTTGCAAGCATCATCG 59.530 47.619 26.27 7.09 0.00 3.84
1730 1794 4.570772 GCAAGCATCATCGGAGTAACTTAA 59.429 41.667 0.00 0.00 0.00 1.85
1740 1804 9.887406 TCATCGGAGTAACTTAATTTTGTTTTC 57.113 29.630 1.98 2.05 0.00 2.29
1777 1841 8.570068 TTTTTGTTCCAGTTAGACTTTGTAGT 57.430 30.769 0.00 0.00 37.31 2.73
1778 1842 8.570068 TTTTGTTCCAGTTAGACTTTGTAGTT 57.430 30.769 0.00 0.00 33.84 2.24
1779 1843 8.570068 TTTGTTCCAGTTAGACTTTGTAGTTT 57.430 30.769 0.00 0.00 33.84 2.66
1780 1844 7.548196 TGTTCCAGTTAGACTTTGTAGTTTG 57.452 36.000 0.00 0.00 33.84 2.93
1781 1845 7.107542 TGTTCCAGTTAGACTTTGTAGTTTGT 58.892 34.615 0.00 0.00 33.84 2.83
1782 1846 8.259411 TGTTCCAGTTAGACTTTGTAGTTTGTA 58.741 33.333 0.00 0.00 33.84 2.41
1814 1878 7.838771 AATTTCCGTATACACTTGTAAGGAC 57.161 36.000 3.32 2.08 34.66 3.85
1835 1904 7.725251 AGGACTTCATTTGCAATCAGTTAAAA 58.275 30.769 0.00 0.00 0.00 1.52
1836 1905 8.370182 AGGACTTCATTTGCAATCAGTTAAAAT 58.630 29.630 0.00 0.00 0.00 1.82
1837 1906 8.437742 GGACTTCATTTGCAATCAGTTAAAATG 58.562 33.333 0.00 0.00 38.82 2.32
1838 1907 8.891671 ACTTCATTTGCAATCAGTTAAAATGT 57.108 26.923 0.00 0.00 38.66 2.71
1839 1908 8.767085 ACTTCATTTGCAATCAGTTAAAATGTG 58.233 29.630 0.00 0.00 38.66 3.21
1840 1909 8.659925 TTCATTTGCAATCAGTTAAAATGTGT 57.340 26.923 0.00 0.00 38.66 3.72
1841 1910 8.296799 TCATTTGCAATCAGTTAAAATGTGTC 57.703 30.769 0.00 0.00 38.66 3.67
1842 1911 8.143193 TCATTTGCAATCAGTTAAAATGTGTCT 58.857 29.630 0.00 0.00 38.66 3.41
1843 1912 9.409312 CATTTGCAATCAGTTAAAATGTGTCTA 57.591 29.630 0.00 0.00 34.85 2.59
1844 1913 9.979578 ATTTGCAATCAGTTAAAATGTGTCTAA 57.020 25.926 0.00 0.00 0.00 2.10
1845 1914 9.979578 TTTGCAATCAGTTAAAATGTGTCTAAT 57.020 25.926 0.00 0.00 0.00 1.73
1846 1915 9.979578 TTGCAATCAGTTAAAATGTGTCTAATT 57.020 25.926 0.00 0.00 0.00 1.40
1876 1945 9.740239 TTAACCTTGCTAACAATATAGTACTCG 57.260 33.333 0.00 0.00 34.61 4.18
1888 1957 0.456221 AGTACTCGCTCCATTCCACG 59.544 55.000 0.00 0.00 0.00 4.94
1889 1958 0.172803 GTACTCGCTCCATTCCACGT 59.827 55.000 0.00 0.00 0.00 4.49
1897 1966 2.870435 GCTCCATTCCACGTTGTAGTGT 60.870 50.000 0.00 0.00 40.33 3.55
1898 1967 3.615592 GCTCCATTCCACGTTGTAGTGTA 60.616 47.826 0.00 0.00 40.33 2.90
1902 1971 5.185442 TCCATTCCACGTTGTAGTGTACATA 59.815 40.000 0.00 0.00 40.33 2.29
2151 2748 1.202405 CGTCATAAATGGGCAAAGGGC 60.202 52.381 0.00 0.00 43.74 5.19
2165 2762 3.126073 CAAAGGGCTTTCTGCAGTTTTC 58.874 45.455 14.67 2.06 45.15 2.29
2173 2770 1.703411 TCTGCAGTTTTCCCCCAAAG 58.297 50.000 14.67 0.00 0.00 2.77
2198 2795 2.637382 TGACCAGAATACTGTTCCTGCA 59.363 45.455 0.00 0.00 42.05 4.41
2203 2800 5.010012 ACCAGAATACTGTTCCTGCAAAAAG 59.990 40.000 0.00 0.00 42.05 2.27
2218 2817 6.228273 TGCAAAAAGAAGTATCAAGTCTCG 57.772 37.500 0.00 0.00 0.00 4.04
2254 2952 6.414408 ACTTGCTCTTGTTCGAGATAAATG 57.586 37.500 0.00 0.00 32.74 2.32
2267 2965 7.268199 TCGAGATAAATGTCTACACGGTAAT 57.732 36.000 0.00 0.00 0.00 1.89
2375 3185 3.008485 AGCCAACTAGAAGGGAAAGAGTG 59.992 47.826 0.00 0.00 0.00 3.51
2382 3192 4.379302 AGAAGGGAAAGAGTGCATTTCT 57.621 40.909 10.28 4.83 36.96 2.52
2385 3195 4.104383 AGGGAAAGAGTGCATTTCTTGA 57.896 40.909 14.77 0.00 36.96 3.02
2434 3244 5.322754 CCCCATATAGACCTTCTAAGTCGA 58.677 45.833 0.00 0.00 39.31 4.20
2448 3258 3.655276 AAGTCGATTACACGGAACAGT 57.345 42.857 0.00 0.00 0.00 3.55
2450 3260 4.352600 AGTCGATTACACGGAACAGTAG 57.647 45.455 0.00 0.00 0.00 2.57
2456 3266 0.677842 ACACGGAACAGTAGGTCCAC 59.322 55.000 0.00 0.00 0.00 4.02
2487 3297 4.758674 CAGCTGGAACCATATCCTAACATG 59.241 45.833 5.57 0.00 40.35 3.21
2499 3309 5.633830 ATCCTAACATGCAAAGTCAACAG 57.366 39.130 0.00 0.00 0.00 3.16
2566 3376 8.713708 AACTCTAGCATAGTTGGATACACTAT 57.286 34.615 0.00 0.00 42.52 2.12
2567 3377 8.713708 ACTCTAGCATAGTTGGATACACTATT 57.286 34.615 0.00 0.00 42.52 1.73
2568 3378 8.580720 ACTCTAGCATAGTTGGATACACTATTG 58.419 37.037 0.00 0.00 42.52 1.90
2569 3379 7.378966 TCTAGCATAGTTGGATACACTATTGC 58.621 38.462 0.00 10.43 42.52 3.56
2570 3380 7.015195 TCTAGCATAGTTGGATACACTATTGCA 59.985 37.037 15.52 0.00 42.52 4.08
2679 3491 8.948631 TTATGTTGTAGCTTAGGATTCTCTTG 57.051 34.615 0.00 0.00 0.00 3.02
2689 3501 6.714356 GCTTAGGATTCTCTTGGCATAAGATT 59.286 38.462 3.49 0.00 0.00 2.40
2789 3601 6.933514 TGGTGATATATCCTTGCAGATGTA 57.066 37.500 10.25 0.00 0.00 2.29
2818 3630 4.202430 TGGGAACACTTCTAACTTCCTTCC 60.202 45.833 0.00 0.00 33.85 3.46
2956 3768 1.968540 GGCGCAGAAAGACAAGGCT 60.969 57.895 10.83 0.00 0.00 4.58
2983 3795 4.495844 GCCGGATTAACAAAAGGAATCGAG 60.496 45.833 5.05 0.00 31.57 4.04
3118 3930 4.741321 AAACATAATCATTGCCACTGGG 57.259 40.909 0.00 0.00 37.18 4.45
3181 3993 3.843027 AGAAGATTGTCTCATCCACTGGT 59.157 43.478 0.00 0.00 0.00 4.00
3196 4008 1.785041 CTGGTGCCCTGTGTTTGTCG 61.785 60.000 0.00 0.00 0.00 4.35
3356 4168 2.862347 GAAGCAGTTCCAGCGCATGC 62.862 60.000 11.47 7.91 43.24 4.06
3449 4261 1.202806 AGCTAACACTTGAGCCTGCAA 60.203 47.619 0.00 0.00 39.65 4.08
3454 4266 0.820891 CACTTGAGCCTGCAACTGGT 60.821 55.000 0.00 0.00 0.00 4.00
3490 4302 3.509967 TCCTTGAAGCAGACATCGTTCTA 59.490 43.478 0.00 0.00 0.00 2.10
3502 4314 1.464734 TCGTTCTAGTCTCTGCTGGG 58.535 55.000 0.00 0.00 0.00 4.45
3526 4338 2.747686 CCATATACCGCCGGGCTT 59.252 61.111 18.34 6.34 36.48 4.35
3577 4389 2.586792 GCTGGCAGGATCCTCGTT 59.413 61.111 12.69 0.00 0.00 3.85
3619 4431 2.233676 TGTGAGTGGAGTGTATGCGATT 59.766 45.455 0.00 0.00 0.00 3.34
3670 4482 1.471684 CACAAAGCTGAAGAGGATGGC 59.528 52.381 0.00 0.00 0.00 4.40
3829 4641 0.109132 GAGTTGGCAAATTCCCGCTG 60.109 55.000 0.00 0.00 0.00 5.18
3883 4695 0.180406 CCGAGGGGATGGTTAAGGTG 59.820 60.000 0.00 0.00 34.06 4.00
3916 4728 2.095212 GGAAACCGACAAGATTCTTGGC 60.095 50.000 25.94 23.35 0.00 4.52
4006 4818 4.473520 AGCGAGGATGTTGCCCGG 62.474 66.667 0.00 0.00 35.94 5.73
4069 4881 1.799544 CTTGCTTGCAAACCCATTCC 58.200 50.000 9.39 0.00 0.00 3.01
4183 4995 7.370383 ACAAAAAGCGTATGATTGTCATTTCT 58.630 30.769 0.00 0.00 38.26 2.52
4184 4996 7.538678 ACAAAAAGCGTATGATTGTCATTTCTC 59.461 33.333 0.00 0.00 38.26 2.87
4336 5149 4.155462 GGAACCCGGTATTTTGAAGAAGAC 59.845 45.833 0.00 0.00 0.00 3.01
4339 5152 5.134661 ACCCGGTATTTTGAAGAAGACAAA 58.865 37.500 0.00 0.00 35.81 2.83
4478 5300 4.709886 AGGAAGGCCCATTTTTATACACAC 59.290 41.667 0.00 0.00 37.41 3.82
4545 5390 9.489084 TGCTGGAAATTCATACACATATACTAC 57.511 33.333 0.00 0.00 0.00 2.73
4571 5416 7.653311 CACAGTTATATGTACTAGCTCATTGCA 59.347 37.037 0.00 0.00 45.94 4.08
4585 5430 2.291741 TCATTGCATGCACGTTGTAACA 59.708 40.909 22.58 1.96 0.00 2.41
4637 5482 2.361757 CCAATTGTGAGTGGCTCAACAA 59.638 45.455 4.43 9.32 42.46 2.83
4644 5489 1.527311 GAGTGGCTCAACAAAGACGTC 59.473 52.381 7.70 7.70 0.00 4.34
4678 5523 6.817765 TTTTATGGTCCTTCTCACATTGAC 57.182 37.500 0.00 0.00 0.00 3.18
4689 5534 1.078709 CACATTGACGTCATCGGCTT 58.921 50.000 20.80 0.00 46.49 4.35
4697 5542 0.778815 CGTCATCGGCTTAAGATCGC 59.221 55.000 6.67 0.00 0.00 4.58
4733 5578 6.600822 GTGAAGATGATGAAAAGGGAATGAGA 59.399 38.462 0.00 0.00 0.00 3.27
4742 5587 9.401058 GATGAAAAGGGAATGAGAGATTTTAGA 57.599 33.333 0.00 0.00 0.00 2.10
4754 5599 3.942115 GAGATTTTAGAAGGAGCCCACAC 59.058 47.826 0.00 0.00 0.00 3.82
4759 5604 4.919774 TTAGAAGGAGCCCACACAAATA 57.080 40.909 0.00 0.00 0.00 1.40
4772 5617 7.621683 AGCCCACACAAATAATATTTTCCCTAA 59.378 33.333 0.00 0.00 0.00 2.69
4843 5688 7.669722 GGAGGAGCCCACATAAATAATATTTCA 59.330 37.037 0.96 0.00 0.00 2.69
4863 5708 4.703897 TCACCTAAATTAAGCCGATCCTG 58.296 43.478 0.00 0.00 0.00 3.86
4934 5779 2.620585 GTTTGATAGCCTGCATTCCCTC 59.379 50.000 0.00 0.00 0.00 4.30
4946 5791 6.347696 CCTGCATTCCCTCATCTATTATCTC 58.652 44.000 0.00 0.00 0.00 2.75
4956 5801 7.310734 CCCTCATCTATTATCTCCTTAACCCAC 60.311 44.444 0.00 0.00 0.00 4.61
4962 5807 9.053472 TCTATTATCTCCTTAACCCACTTTTCA 57.947 33.333 0.00 0.00 0.00 2.69
4963 5808 9.331282 CTATTATCTCCTTAACCCACTTTTCAG 57.669 37.037 0.00 0.00 0.00 3.02
4964 5809 5.843019 ATCTCCTTAACCCACTTTTCAGA 57.157 39.130 0.00 0.00 0.00 3.27
4975 5820 4.445735 CCCACTTTTCAGAGTTTGGTAGGA 60.446 45.833 0.00 0.00 0.00 2.94
4980 5825 7.607991 CACTTTTCAGAGTTTGGTAGGATGTAT 59.392 37.037 0.00 0.00 0.00 2.29
4981 5826 7.607991 ACTTTTCAGAGTTTGGTAGGATGTATG 59.392 37.037 0.00 0.00 0.00 2.39
4982 5827 6.867519 TTCAGAGTTTGGTAGGATGTATGA 57.132 37.500 0.00 0.00 0.00 2.15
4983 5828 6.867519 TCAGAGTTTGGTAGGATGTATGAA 57.132 37.500 0.00 0.00 0.00 2.57
4984 5829 6.640518 TCAGAGTTTGGTAGGATGTATGAAC 58.359 40.000 0.00 0.00 0.00 3.18
4985 5830 6.440647 TCAGAGTTTGGTAGGATGTATGAACT 59.559 38.462 0.00 0.00 0.00 3.01
4986 5831 7.038302 TCAGAGTTTGGTAGGATGTATGAACTT 60.038 37.037 0.00 0.00 0.00 2.66
4987 5832 7.278868 CAGAGTTTGGTAGGATGTATGAACTTC 59.721 40.741 0.00 0.00 0.00 3.01
4988 5833 6.415573 AGTTTGGTAGGATGTATGAACTTCC 58.584 40.000 2.99 2.99 45.88 3.46
4989 5834 5.367945 TTGGTAGGATGTATGAACTTCCC 57.632 43.478 6.79 0.00 46.43 3.97
4990 5835 4.631234 TGGTAGGATGTATGAACTTCCCT 58.369 43.478 6.79 0.00 46.43 4.20
4991 5836 5.036916 TGGTAGGATGTATGAACTTCCCTT 58.963 41.667 6.79 0.00 46.43 3.95
4992 5837 6.206787 TGGTAGGATGTATGAACTTCCCTTA 58.793 40.000 6.79 0.00 46.43 2.69
4993 5838 6.326583 TGGTAGGATGTATGAACTTCCCTTAG 59.673 42.308 6.79 0.00 46.43 2.18
4994 5839 5.297569 AGGATGTATGAACTTCCCTTAGC 57.702 43.478 6.79 0.00 46.43 3.09
4995 5840 4.103311 AGGATGTATGAACTTCCCTTAGCC 59.897 45.833 6.79 0.00 46.43 3.93
4996 5841 4.141482 GGATGTATGAACTTCCCTTAGCCA 60.141 45.833 0.19 0.00 41.82 4.75
4997 5842 5.456763 GGATGTATGAACTTCCCTTAGCCAT 60.457 44.000 0.19 0.00 41.82 4.40
4998 5843 4.780815 TGTATGAACTTCCCTTAGCCATG 58.219 43.478 0.00 0.00 0.00 3.66
4999 5844 2.128771 TGAACTTCCCTTAGCCATGC 57.871 50.000 0.00 0.00 0.00 4.06
5000 5845 1.635487 TGAACTTCCCTTAGCCATGCT 59.365 47.619 0.00 0.00 43.41 3.79
5001 5846 2.293170 GAACTTCCCTTAGCCATGCTC 58.707 52.381 0.00 0.00 40.44 4.26
5002 5847 0.179000 ACTTCCCTTAGCCATGCTCG 59.821 55.000 0.00 0.00 40.44 5.03
5003 5848 1.153168 TTCCCTTAGCCATGCTCGC 60.153 57.895 0.00 0.00 40.44 5.03
5004 5849 2.592861 CCCTTAGCCATGCTCGCC 60.593 66.667 0.00 0.00 40.44 5.54
5005 5850 2.507944 CCTTAGCCATGCTCGCCT 59.492 61.111 0.00 0.00 40.44 5.52
5006 5851 1.596477 CCTTAGCCATGCTCGCCTC 60.596 63.158 0.00 0.00 40.44 4.70
5007 5852 1.144716 CTTAGCCATGCTCGCCTCA 59.855 57.895 0.00 0.00 40.44 3.86
5008 5853 0.250209 CTTAGCCATGCTCGCCTCAT 60.250 55.000 0.00 0.00 40.44 2.90
5009 5854 1.001293 CTTAGCCATGCTCGCCTCATA 59.999 52.381 0.00 0.00 40.44 2.15
5010 5855 0.318441 TAGCCATGCTCGCCTCATAC 59.682 55.000 0.00 0.00 40.44 2.39
5011 5856 1.963338 GCCATGCTCGCCTCATACC 60.963 63.158 0.00 0.00 0.00 2.73
5012 5857 1.665916 CCATGCTCGCCTCATACCG 60.666 63.158 0.00 0.00 0.00 4.02
5013 5858 1.363807 CATGCTCGCCTCATACCGA 59.636 57.895 0.00 0.00 0.00 4.69
5014 5859 0.249447 CATGCTCGCCTCATACCGAA 60.249 55.000 0.00 0.00 32.56 4.30
5015 5860 0.464036 ATGCTCGCCTCATACCGAAA 59.536 50.000 0.00 0.00 32.56 3.46
5016 5861 0.459585 TGCTCGCCTCATACCGAAAC 60.460 55.000 0.00 0.00 32.56 2.78
5017 5862 0.459585 GCTCGCCTCATACCGAAACA 60.460 55.000 0.00 0.00 32.56 2.83
5018 5863 1.560923 CTCGCCTCATACCGAAACAG 58.439 55.000 0.00 0.00 32.56 3.16
5019 5864 0.892755 TCGCCTCATACCGAAACAGT 59.107 50.000 0.00 0.00 0.00 3.55
5020 5865 1.135199 TCGCCTCATACCGAAACAGTC 60.135 52.381 0.00 0.00 0.00 3.51
5021 5866 1.653151 GCCTCATACCGAAACAGTCC 58.347 55.000 0.00 0.00 0.00 3.85
5022 5867 1.066430 GCCTCATACCGAAACAGTCCA 60.066 52.381 0.00 0.00 0.00 4.02
5023 5868 2.614481 GCCTCATACCGAAACAGTCCAA 60.614 50.000 0.00 0.00 0.00 3.53
5024 5869 3.873910 CCTCATACCGAAACAGTCCAAT 58.126 45.455 0.00 0.00 0.00 3.16
5025 5870 4.682320 GCCTCATACCGAAACAGTCCAATA 60.682 45.833 0.00 0.00 0.00 1.90
5026 5871 5.050490 CCTCATACCGAAACAGTCCAATAG 58.950 45.833 0.00 0.00 0.00 1.73
5027 5872 4.439057 TCATACCGAAACAGTCCAATAGC 58.561 43.478 0.00 0.00 0.00 2.97
5028 5873 2.109425 ACCGAAACAGTCCAATAGCC 57.891 50.000 0.00 0.00 0.00 3.93
5029 5874 1.349688 ACCGAAACAGTCCAATAGCCA 59.650 47.619 0.00 0.00 0.00 4.75
5030 5875 2.026262 ACCGAAACAGTCCAATAGCCAT 60.026 45.455 0.00 0.00 0.00 4.40
5031 5876 2.355756 CCGAAACAGTCCAATAGCCATG 59.644 50.000 0.00 0.00 0.00 3.66
5032 5877 2.223340 CGAAACAGTCCAATAGCCATGC 60.223 50.000 0.00 0.00 0.00 4.06
5033 5878 2.814805 AACAGTCCAATAGCCATGCT 57.185 45.000 0.00 0.00 43.41 3.79
5034 5879 2.338577 ACAGTCCAATAGCCATGCTC 57.661 50.000 0.00 0.00 40.44 4.26
5035 5880 1.561076 ACAGTCCAATAGCCATGCTCA 59.439 47.619 0.00 0.00 40.44 4.26
5036 5881 1.945394 CAGTCCAATAGCCATGCTCAC 59.055 52.381 0.00 0.00 40.44 3.51
5037 5882 1.561076 AGTCCAATAGCCATGCTCACA 59.439 47.619 0.00 0.00 40.44 3.58
5038 5883 2.174210 AGTCCAATAGCCATGCTCACAT 59.826 45.455 0.00 0.00 40.44 3.21
5057 5902 2.291209 TGGAACATGTTGATGCAGGT 57.709 45.000 17.58 0.00 34.67 4.00
5058 5903 2.596346 TGGAACATGTTGATGCAGGTT 58.404 42.857 17.58 0.00 44.52 3.50
5060 5905 2.855180 GAACATGTTGATGCAGGTTCG 58.145 47.619 17.58 0.00 45.63 3.95
5061 5906 0.523072 ACATGTTGATGCAGGTTCGC 59.477 50.000 0.00 0.00 32.14 4.70
5062 5907 0.806868 CATGTTGATGCAGGTTCGCT 59.193 50.000 0.00 0.00 0.00 4.93
5063 5908 0.806868 ATGTTGATGCAGGTTCGCTG 59.193 50.000 0.00 0.00 0.00 5.18
5065 5910 1.302752 TTGATGCAGGTTCGCTGCT 60.303 52.632 13.52 1.32 46.95 4.24
5066 5911 1.300971 TTGATGCAGGTTCGCTGCTC 61.301 55.000 13.52 9.41 46.95 4.26
5067 5912 2.806856 GATGCAGGTTCGCTGCTCG 61.807 63.158 13.52 0.00 46.95 5.03
5068 5913 3.596066 ATGCAGGTTCGCTGCTCGT 62.596 57.895 13.52 0.00 46.95 4.18
5069 5914 3.482783 GCAGGTTCGCTGCTCGTC 61.483 66.667 6.29 0.00 43.81 4.20
5070 5915 2.811317 CAGGTTCGCTGCTCGTCC 60.811 66.667 0.00 0.00 39.67 4.79
5071 5916 3.303135 AGGTTCGCTGCTCGTCCA 61.303 61.111 0.00 0.00 39.67 4.02
5072 5917 2.125512 GGTTCGCTGCTCGTCCAT 60.126 61.111 0.00 0.00 39.67 3.41
5073 5918 2.456119 GGTTCGCTGCTCGTCCATG 61.456 63.158 0.00 0.00 39.67 3.66
5074 5919 2.815211 TTCGCTGCTCGTCCATGC 60.815 61.111 0.00 0.00 39.67 4.06
5075 5920 3.300934 TTCGCTGCTCGTCCATGCT 62.301 57.895 0.00 0.00 39.67 3.79
5076 5921 1.944234 TTCGCTGCTCGTCCATGCTA 61.944 55.000 0.00 0.00 39.67 3.49
5077 5922 1.519234 CGCTGCTCGTCCATGCTAA 60.519 57.895 0.00 0.00 0.00 3.09
5078 5923 1.485838 CGCTGCTCGTCCATGCTAAG 61.486 60.000 0.00 0.00 0.00 2.18
5079 5924 0.460987 GCTGCTCGTCCATGCTAAGT 60.461 55.000 0.00 0.00 0.00 2.24
5080 5925 2.009042 GCTGCTCGTCCATGCTAAGTT 61.009 52.381 0.00 0.00 0.00 2.66
5081 5926 1.929836 CTGCTCGTCCATGCTAAGTTC 59.070 52.381 0.00 0.00 0.00 3.01
5082 5927 0.924090 GCTCGTCCATGCTAAGTTCG 59.076 55.000 0.00 0.00 0.00 3.95
5083 5928 1.469251 GCTCGTCCATGCTAAGTTCGA 60.469 52.381 0.00 0.00 0.00 3.71
5084 5929 2.186076 CTCGTCCATGCTAAGTTCGAC 58.814 52.381 0.00 0.00 0.00 4.20
5085 5930 1.135199 TCGTCCATGCTAAGTTCGACC 60.135 52.381 0.00 0.00 0.00 4.79
5086 5931 1.135083 CGTCCATGCTAAGTTCGACCT 60.135 52.381 0.00 0.00 0.00 3.85
5087 5932 2.098607 CGTCCATGCTAAGTTCGACCTA 59.901 50.000 0.00 0.00 0.00 3.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 8.149973 ACACAAGAAGTTTACGAATGTATTGT 57.850 30.769 0.00 0.00 30.41 2.71
54 60 2.571528 CTGACGCAGCATACGAGAC 58.428 57.895 0.00 0.00 0.00 3.36
68 74 7.010923 CCACATCTTCAAGTCTAAATAGCTGAC 59.989 40.741 0.00 0.00 0.00 3.51
90 96 1.230074 TCCATATTCCCATGGCCACA 58.770 50.000 8.16 0.00 44.47 4.17
198 204 1.077787 CGGGCTTTGATAGTGGGCA 60.078 57.895 0.00 0.00 0.00 5.36
282 288 1.376543 CCTTGCTGACGCTGATTCAT 58.623 50.000 0.00 0.00 36.97 2.57
333 343 3.492756 ACAACAACAGCAACAACAACAAC 59.507 39.130 0.00 0.00 0.00 3.32
346 356 0.457035 ACCAGCAGCAACAACAACAG 59.543 50.000 0.00 0.00 0.00 3.16
358 368 0.877071 GACAACATCACCACCAGCAG 59.123 55.000 0.00 0.00 0.00 4.24
361 371 0.250295 ACCGACAACATCACCACCAG 60.250 55.000 0.00 0.00 0.00 4.00
370 380 0.817634 CACACCACCACCGACAACAT 60.818 55.000 0.00 0.00 0.00 2.71
372 382 2.830285 GCACACCACCACCGACAAC 61.830 63.158 0.00 0.00 0.00 3.32
373 383 2.515057 GCACACCACCACCGACAA 60.515 61.111 0.00 0.00 0.00 3.18
374 384 3.113514 ATGCACACCACCACCGACA 62.114 57.895 0.00 0.00 0.00 4.35
375 385 2.281484 ATGCACACCACCACCGAC 60.281 61.111 0.00 0.00 0.00 4.79
376 386 2.031919 GATGCACACCACCACCGA 59.968 61.111 0.00 0.00 0.00 4.69
377 387 3.055719 GGATGCACACCACCACCG 61.056 66.667 6.86 0.00 0.00 4.94
405 415 1.408702 CACACAAACTTCCCACCCAAG 59.591 52.381 0.00 0.00 0.00 3.61
406 416 1.272760 ACACACAAACTTCCCACCCAA 60.273 47.619 0.00 0.00 0.00 4.12
555 567 6.763135 ACATATGAAAAGCTCAAGATCGCTAA 59.237 34.615 10.38 0.00 37.67 3.09
559 571 7.246311 ACAAACATATGAAAAGCTCAAGATCG 58.754 34.615 10.38 0.00 37.67 3.69
585 597 1.949525 CCATTGAGTTTATCGCTGGGG 59.050 52.381 0.00 0.00 31.51 4.96
631 643 7.094805 CCGAATCTACCATTCTCAAGTTGAAAA 60.095 37.037 7.06 0.00 0.00 2.29
648 660 2.286418 CCAGCATTTTCGCCGAATCTAC 60.286 50.000 0.00 0.00 0.00 2.59
655 667 1.003262 CAACACCAGCATTTTCGCCG 61.003 55.000 0.00 0.00 0.00 6.46
656 668 0.313672 TCAACACCAGCATTTTCGCC 59.686 50.000 0.00 0.00 0.00 5.54
657 669 2.132740 TTCAACACCAGCATTTTCGC 57.867 45.000 0.00 0.00 0.00 4.70
667 679 6.462552 TTCAATCAATCTGTTTCAACACCA 57.537 33.333 0.00 0.00 34.70 4.17
669 681 8.077991 TCTCATTCAATCAATCTGTTTCAACAC 58.922 33.333 0.00 0.00 34.70 3.32
704 716 5.385198 TCTTTTAGAGCCACTGAAAACCAT 58.615 37.500 0.00 0.00 34.53 3.55
707 719 6.261158 ACTTCTCTTTTAGAGCCACTGAAAAC 59.739 38.462 0.00 0.00 42.04 2.43
712 724 6.151985 TCTCTACTTCTCTTTTAGAGCCACTG 59.848 42.308 0.00 0.00 42.04 3.66
869 881 2.672996 GGCGGGAATGTGTGTGCT 60.673 61.111 0.00 0.00 0.00 4.40
959 976 2.171840 CCTTTCTTCGACAGGAGAGGA 58.828 52.381 11.12 0.00 36.35 3.71
995 1012 2.794820 GATAGCCAGCGCCATCTCCC 62.795 65.000 2.29 0.00 31.20 4.30
996 1013 1.375268 GATAGCCAGCGCCATCTCC 60.375 63.158 2.29 0.00 31.20 3.71
997 1014 1.375268 GGATAGCCAGCGCCATCTC 60.375 63.158 2.29 0.00 34.01 2.75
1227 1250 2.432628 CCGACGTTGAGGCAGGTC 60.433 66.667 3.74 0.00 0.00 3.85
1245 1268 1.379044 CACCTTGGAGGGGATGCAC 60.379 63.158 0.00 0.00 43.10 4.57
1268 1291 2.228822 GGCGTCACCAGTCAATCAAAAT 59.771 45.455 0.00 0.00 38.86 1.82
1269 1292 1.606668 GGCGTCACCAGTCAATCAAAA 59.393 47.619 0.00 0.00 38.86 2.44
1270 1293 1.234821 GGCGTCACCAGTCAATCAAA 58.765 50.000 0.00 0.00 38.86 2.69
1271 1294 0.605319 GGGCGTCACCAGTCAATCAA 60.605 55.000 0.00 0.00 42.05 2.57
1272 1295 1.003839 GGGCGTCACCAGTCAATCA 60.004 57.895 0.00 0.00 42.05 2.57
1273 1296 0.741221 GAGGGCGTCACCAGTCAATC 60.741 60.000 1.64 0.00 42.05 2.67
1282 1305 2.027625 CAAACGGAGAGGGCGTCAC 61.028 63.158 10.15 2.81 0.00 3.67
1283 1306 2.035237 AACAAACGGAGAGGGCGTCA 62.035 55.000 10.15 0.00 0.00 4.35
1345 1371 4.267214 CACGCATCACAGATCTAAGAACAG 59.733 45.833 0.00 0.00 0.00 3.16
1350 1376 1.863454 GCCACGCATCACAGATCTAAG 59.137 52.381 0.00 0.00 0.00 2.18
1366 1392 8.959705 ACAAGAACCTAGTAATTAATAGCCAC 57.040 34.615 13.31 7.20 0.00 5.01
1380 1406 3.378339 ACAACGAACGACAAGAACCTAG 58.622 45.455 0.14 0.00 0.00 3.02
1381 1407 3.441496 ACAACGAACGACAAGAACCTA 57.559 42.857 0.14 0.00 0.00 3.08
1383 1409 2.097056 GCTACAACGAACGACAAGAACC 60.097 50.000 0.14 0.00 0.00 3.62
1384 1410 2.793232 AGCTACAACGAACGACAAGAAC 59.207 45.455 0.14 0.00 0.00 3.01
1386 1412 2.658285 GAGCTACAACGAACGACAAGA 58.342 47.619 0.14 0.00 0.00 3.02
1387 1413 1.382419 CGAGCTACAACGAACGACAAG 59.618 52.381 0.14 0.00 0.00 3.16
1407 1463 5.631512 TCAATTAATAAAAGCAACGCCACAC 59.368 36.000 0.00 0.00 0.00 3.82
1429 1485 6.569035 GCGCCTCATAATCAAATCATCAATCA 60.569 38.462 0.00 0.00 0.00 2.57
1430 1486 5.798934 GCGCCTCATAATCAAATCATCAATC 59.201 40.000 0.00 0.00 0.00 2.67
1431 1487 5.336213 GGCGCCTCATAATCAAATCATCAAT 60.336 40.000 22.15 0.00 0.00 2.57
1432 1488 4.022935 GGCGCCTCATAATCAAATCATCAA 60.023 41.667 22.15 0.00 0.00 2.57
1433 1489 3.503363 GGCGCCTCATAATCAAATCATCA 59.497 43.478 22.15 0.00 0.00 3.07
1434 1490 3.755378 AGGCGCCTCATAATCAAATCATC 59.245 43.478 27.08 0.00 0.00 2.92
1435 1491 3.504906 CAGGCGCCTCATAATCAAATCAT 59.495 43.478 30.29 0.00 0.00 2.45
1440 1499 2.418368 AACAGGCGCCTCATAATCAA 57.582 45.000 30.29 0.00 0.00 2.57
1450 1509 2.126346 GCATCACAAACAGGCGCC 60.126 61.111 21.89 21.89 0.00 6.53
1475 1534 2.257409 CTACCCCGCTGCAAGACCAT 62.257 60.000 0.00 0.00 34.07 3.55
1503 1562 6.164176 CGAACTCAAACCCTAGTTTCATAGT 58.836 40.000 0.00 0.00 44.47 2.12
1511 1574 2.367567 TCAAGCGAACTCAAACCCTAGT 59.632 45.455 0.00 0.00 0.00 2.57
1527 1590 3.758554 TGGCAAAAGACCTCTAATCAAGC 59.241 43.478 0.00 0.00 0.00 4.01
1548 1611 7.180322 AGACCTCTAATCATGGCAGTATATG 57.820 40.000 0.00 0.00 0.00 1.78
1551 1614 7.619050 CATAAGACCTCTAATCATGGCAGTAT 58.381 38.462 0.00 0.00 0.00 2.12
1555 1618 4.102996 TGCATAAGACCTCTAATCATGGCA 59.897 41.667 0.00 0.00 0.00 4.92
1591 1655 6.642707 TTTGACGTAATTTCAATTCTGGGT 57.357 33.333 0.00 0.00 33.03 4.51
1757 1821 7.549615 ACAAACTACAAAGTCTAACTGGAAC 57.450 36.000 0.00 0.00 33.75 3.62
1778 1842 9.762933 GTGTATACGGAAATTATAAGGGTACAA 57.237 33.333 0.00 0.00 0.00 2.41
1779 1843 9.146586 AGTGTATACGGAAATTATAAGGGTACA 57.853 33.333 0.00 0.00 0.00 2.90
1780 1844 9.987272 AAGTGTATACGGAAATTATAAGGGTAC 57.013 33.333 0.00 0.00 0.00 3.34
1781 1845 9.985730 CAAGTGTATACGGAAATTATAAGGGTA 57.014 33.333 0.00 0.00 0.00 3.69
1782 1846 8.488668 ACAAGTGTATACGGAAATTATAAGGGT 58.511 33.333 0.00 0.00 0.00 4.34
1796 1860 8.380644 CAAATGAAGTCCTTACAAGTGTATACG 58.619 37.037 0.00 0.00 0.00 3.06
1814 1878 8.767085 ACACATTTTAACTGATTGCAAATGAAG 58.233 29.630 1.71 1.23 35.41 3.02
1876 1945 1.732259 CACTACAACGTGGAATGGAGC 59.268 52.381 0.00 0.00 30.15 4.70
2108 2181 6.381994 ACGTACTCCCTCTGTTCCATAATTTA 59.618 38.462 0.00 0.00 0.00 1.40
2110 2183 4.715297 ACGTACTCCCTCTGTTCCATAATT 59.285 41.667 0.00 0.00 0.00 1.40
2128 2201 3.066203 CCCTTTGCCCATTTATGACGTAC 59.934 47.826 0.00 0.00 0.00 3.67
2131 2204 1.202405 GCCCTTTGCCCATTTATGACG 60.202 52.381 0.00 0.00 0.00 4.35
2151 2748 1.703411 TGGGGGAAAACTGCAGAAAG 58.297 50.000 23.35 0.00 0.00 2.62
2165 2762 0.771127 TCTGGTCAACTCTTTGGGGG 59.229 55.000 0.00 0.00 33.06 5.40
2203 2800 7.419204 AGCTTGTATACGAGACTTGATACTTC 58.581 38.462 22.23 1.86 0.00 3.01
2235 2933 6.752351 TGTAGACATTTATCTCGAACAAGAGC 59.248 38.462 0.00 0.00 38.12 4.09
2254 2952 6.154445 TGAGAAGTTGAATTACCGTGTAGAC 58.846 40.000 0.00 0.00 0.00 2.59
2267 2965 7.792364 TCTTCCTACCTTATGAGAAGTTGAA 57.208 36.000 0.00 0.00 36.26 2.69
2322 3027 4.030913 TCCCTACCCATCTAACTTCTGTG 58.969 47.826 0.00 0.00 0.00 3.66
2375 3185 6.515272 TTGTAAGAGGGAATCAAGAAATGC 57.485 37.500 0.00 0.00 0.00 3.56
2411 3221 5.322754 TCGACTTAGAAGGTCTATATGGGG 58.677 45.833 0.00 0.00 0.00 4.96
2413 3223 9.011095 TGTAATCGACTTAGAAGGTCTATATGG 57.989 37.037 0.00 0.00 0.00 2.74
2423 3233 5.396484 TGTTCCGTGTAATCGACTTAGAAG 58.604 41.667 0.00 0.00 0.00 2.85
2434 3244 3.056322 GTGGACCTACTGTTCCGTGTAAT 60.056 47.826 0.00 0.00 0.00 1.89
2448 3258 3.244422 CCAGCTGTTACAAAGTGGACCTA 60.244 47.826 13.81 0.00 0.00 3.08
2450 3260 1.880027 CCAGCTGTTACAAAGTGGACC 59.120 52.381 13.81 0.00 0.00 4.46
2456 3266 5.066505 GGATATGGTTCCAGCTGTTACAAAG 59.933 44.000 13.81 0.00 35.72 2.77
2487 3297 6.144577 GTCAAATTATGCTGTTGACTTTGC 57.855 37.500 8.19 0.00 44.95 3.68
2499 3309 5.393461 CCTTGTCTTGGGAGTCAAATTATGC 60.393 44.000 0.00 0.00 34.56 3.14
2569 3379 6.924111 AGTAATATCCAACCTTGCAAAGTTG 58.076 36.000 26.99 26.99 44.25 3.16
2570 3380 8.644374 TTAGTAATATCCAACCTTGCAAAGTT 57.356 30.769 7.63 7.63 44.25 2.66
2571 3381 8.823220 ATTAGTAATATCCAACCTTGCAAAGT 57.177 30.769 0.00 0.00 44.25 2.66
2689 3501 9.905713 ATGTTTAGCTTCCAGATAAAGATGTTA 57.094 29.630 0.00 0.00 38.22 2.41
2789 3601 6.940867 GGAAGTTAGAAGTGTTCCCAATAAGT 59.059 38.462 0.00 0.00 33.60 2.24
2818 3630 1.676746 CCTGGTGGATCAGAAGCATG 58.323 55.000 0.00 0.00 36.93 4.06
2956 3768 1.889829 CCTTTTGTTAATCCGGCCACA 59.110 47.619 2.24 0.00 0.00 4.17
2965 3777 3.699538 GGCCCTCGATTCCTTTTGTTAAT 59.300 43.478 0.00 0.00 0.00 1.40
2983 3795 4.827835 ACTTTGTTCTTCTTAAAGAGGCCC 59.172 41.667 0.00 0.00 42.36 5.80
3043 3855 4.036380 ACCAAATCAACCGAAACTTCTGAC 59.964 41.667 0.00 0.00 0.00 3.51
3118 3930 5.355350 CCCAGGAAGTGATTTTACATCAGAC 59.645 44.000 0.00 0.00 0.00 3.51
3181 3993 2.203280 CCCGACAAACACAGGGCA 60.203 61.111 0.00 0.00 37.07 5.36
3196 4008 8.942209 ATGACAACCATTTTCTTTGGGATACCC 61.942 40.741 0.00 0.00 45.74 3.69
3370 4182 7.025963 CCTTTGTCTTGAGCATAAACTTCATC 58.974 38.462 0.00 0.00 0.00 2.92
3449 4261 1.486997 ATGCTCTGCTCACCACCAGT 61.487 55.000 0.00 0.00 0.00 4.00
3454 4266 0.035725 CAAGGATGCTCTGCTCACCA 60.036 55.000 0.00 0.00 0.00 4.17
3490 4302 1.305718 GGTCCTCCCAGCAGAGACT 60.306 63.158 0.38 0.00 35.82 3.24
3502 4314 1.885163 CGGCGGTATATGGGGTCCTC 61.885 65.000 0.00 0.00 0.00 3.71
3670 4482 1.626654 GGAACTCGACACATGCCACG 61.627 60.000 0.00 0.00 0.00 4.94
3751 4563 3.461773 CCGACGGATGCCACCTCT 61.462 66.667 8.64 0.00 0.00 3.69
3814 4626 1.321805 CCATCAGCGGGAATTTGCCA 61.322 55.000 7.77 0.00 0.00 4.92
3883 4695 1.515521 CGGTTTCCTTGTCAGCCACC 61.516 60.000 0.00 0.00 0.00 4.61
3916 4728 1.297819 CTGCGCCATTATGTGCACG 60.298 57.895 13.13 0.00 46.07 5.34
4069 4881 5.540400 AAAATCATATGTGGATGGCCTTG 57.460 39.130 3.32 0.00 34.31 3.61
4107 4919 5.623956 TTTGGAACTTCCTGAGACAAGTA 57.376 39.130 9.31 0.00 37.46 2.24
4432 5254 3.243359 TGTTCTTTCTGGGCAAGGATT 57.757 42.857 0.00 0.00 0.00 3.01
4433 5255 2.978156 TGTTCTTTCTGGGCAAGGAT 57.022 45.000 0.00 0.00 0.00 3.24
4434 5256 2.746279 TTGTTCTTTCTGGGCAAGGA 57.254 45.000 0.00 0.00 0.00 3.36
4435 5257 3.493176 CCTTTTGTTCTTTCTGGGCAAGG 60.493 47.826 0.00 0.00 0.00 3.61
4436 5258 3.384467 TCCTTTTGTTCTTTCTGGGCAAG 59.616 43.478 0.00 0.00 0.00 4.01
4437 5259 3.370104 TCCTTTTGTTCTTTCTGGGCAA 58.630 40.909 0.00 0.00 0.00 4.52
4438 5260 3.025322 TCCTTTTGTTCTTTCTGGGCA 57.975 42.857 0.00 0.00 0.00 5.36
4545 5390 7.653311 TGCAATGAGCTAGTACATATAACTGTG 59.347 37.037 0.00 0.77 45.94 3.66
4571 5416 1.156736 GCCTCTGTTACAACGTGCAT 58.843 50.000 0.00 0.00 0.00 3.96
4585 5430 8.579850 TGAATCACTAAAATATGTTTGCCTCT 57.420 30.769 0.00 0.00 0.00 3.69
4622 5467 1.261619 CGTCTTTGTTGAGCCACTCAC 59.738 52.381 0.00 0.00 40.46 3.51
4657 5502 4.020573 ACGTCAATGTGAGAAGGACCATAA 60.021 41.667 0.00 0.00 0.00 1.90
4669 5514 0.246360 AGCCGATGACGTCAATGTGA 59.754 50.000 24.13 0.00 37.88 3.58
4675 5520 2.540973 CGATCTTAAGCCGATGACGTCA 60.541 50.000 22.48 22.48 37.88 4.35
4678 5523 0.778815 GCGATCTTAAGCCGATGACG 59.221 55.000 17.34 7.81 39.43 4.35
4689 5534 4.989044 TCACATTCTACAACGCGATCTTA 58.011 39.130 15.93 0.00 0.00 2.10
4697 5542 6.892310 TCATCATCTTCACATTCTACAACG 57.108 37.500 0.00 0.00 0.00 4.10
4733 5578 3.330701 TGTGTGGGCTCCTTCTAAAATCT 59.669 43.478 0.00 0.00 0.00 2.40
4742 5587 7.364673 GGAAAATATTATTTGTGTGGGCTCCTT 60.365 37.037 2.48 0.00 0.00 3.36
4843 5688 4.086706 CCAGGATCGGCTTAATTTAGGT 57.913 45.455 0.00 0.00 0.00 3.08
4855 5700 1.817099 GCTGTCAAGCCAGGATCGG 60.817 63.158 0.00 0.00 44.22 4.18
4856 5701 3.805267 GCTGTCAAGCCAGGATCG 58.195 61.111 0.00 0.00 44.22 3.69
4934 5779 9.853177 AAAAGTGGGTTAAGGAGATAATAGATG 57.147 33.333 0.00 0.00 0.00 2.90
4946 5791 5.221244 CCAAACTCTGAAAAGTGGGTTAAGG 60.221 44.000 0.00 0.00 0.00 2.69
4956 5801 7.824289 TCATACATCCTACCAAACTCTGAAAAG 59.176 37.037 0.00 0.00 0.00 2.27
4962 5807 6.875972 AGTTCATACATCCTACCAAACTCT 57.124 37.500 0.00 0.00 0.00 3.24
4963 5808 6.539103 GGAAGTTCATACATCCTACCAAACTC 59.461 42.308 5.01 0.00 38.75 3.01
4964 5809 6.415573 GGAAGTTCATACATCCTACCAAACT 58.584 40.000 5.01 0.00 38.75 2.66
4975 5820 5.380043 CATGGCTAAGGGAAGTTCATACAT 58.620 41.667 5.01 0.00 0.00 2.29
4980 5825 1.635487 AGCATGGCTAAGGGAAGTTCA 59.365 47.619 5.01 0.00 36.99 3.18
4981 5826 2.293170 GAGCATGGCTAAGGGAAGTTC 58.707 52.381 0.00 0.00 39.88 3.01
4982 5827 1.407437 CGAGCATGGCTAAGGGAAGTT 60.407 52.381 0.00 0.00 39.88 2.66
4983 5828 0.179000 CGAGCATGGCTAAGGGAAGT 59.821 55.000 0.00 0.00 39.88 3.01
4984 5829 1.162800 GCGAGCATGGCTAAGGGAAG 61.163 60.000 0.00 0.00 39.88 3.46
4985 5830 1.153168 GCGAGCATGGCTAAGGGAA 60.153 57.895 0.00 0.00 39.88 3.97
4986 5831 2.505982 GCGAGCATGGCTAAGGGA 59.494 61.111 0.00 0.00 39.88 4.20
4987 5832 2.592861 GGCGAGCATGGCTAAGGG 60.593 66.667 0.00 0.00 39.88 3.95
4988 5833 1.596477 GAGGCGAGCATGGCTAAGG 60.596 63.158 4.25 0.00 45.90 2.69
4989 5834 0.250209 ATGAGGCGAGCATGGCTAAG 60.250 55.000 4.25 0.00 45.90 2.18
4990 5835 1.047801 TATGAGGCGAGCATGGCTAA 58.952 50.000 4.25 0.00 45.90 3.09
4991 5836 0.318441 GTATGAGGCGAGCATGGCTA 59.682 55.000 4.25 0.00 45.90 3.93
4993 5838 1.963338 GGTATGAGGCGAGCATGGC 60.963 63.158 0.00 0.00 40.04 4.40
4994 5839 1.665916 CGGTATGAGGCGAGCATGG 60.666 63.158 0.00 0.00 0.00 3.66
4995 5840 0.249447 TTCGGTATGAGGCGAGCATG 60.249 55.000 0.00 0.00 0.00 4.06
4996 5841 0.464036 TTTCGGTATGAGGCGAGCAT 59.536 50.000 0.00 0.00 0.00 3.79
4997 5842 0.459585 GTTTCGGTATGAGGCGAGCA 60.460 55.000 0.00 0.00 0.00 4.26
4998 5843 0.459585 TGTTTCGGTATGAGGCGAGC 60.460 55.000 0.00 0.00 0.00 5.03
4999 5844 1.135083 ACTGTTTCGGTATGAGGCGAG 60.135 52.381 0.00 0.00 0.00 5.03
5000 5845 0.892755 ACTGTTTCGGTATGAGGCGA 59.107 50.000 0.00 0.00 0.00 5.54
5001 5846 1.278238 GACTGTTTCGGTATGAGGCG 58.722 55.000 0.00 0.00 0.00 5.52
5002 5847 1.066430 TGGACTGTTTCGGTATGAGGC 60.066 52.381 0.00 0.00 0.00 4.70
5003 5848 3.328382 TTGGACTGTTTCGGTATGAGG 57.672 47.619 0.00 0.00 0.00 3.86
5004 5849 4.508124 GCTATTGGACTGTTTCGGTATGAG 59.492 45.833 0.00 0.00 0.00 2.90
5005 5850 4.439057 GCTATTGGACTGTTTCGGTATGA 58.561 43.478 0.00 0.00 0.00 2.15
5006 5851 3.560068 GGCTATTGGACTGTTTCGGTATG 59.440 47.826 0.00 0.00 0.00 2.39
5007 5852 3.199071 TGGCTATTGGACTGTTTCGGTAT 59.801 43.478 0.00 0.00 0.00 2.73
5008 5853 2.568062 TGGCTATTGGACTGTTTCGGTA 59.432 45.455 0.00 0.00 0.00 4.02
5009 5854 1.349688 TGGCTATTGGACTGTTTCGGT 59.650 47.619 0.00 0.00 0.00 4.69
5010 5855 2.107950 TGGCTATTGGACTGTTTCGG 57.892 50.000 0.00 0.00 0.00 4.30
5011 5856 2.223340 GCATGGCTATTGGACTGTTTCG 60.223 50.000 0.00 0.00 0.00 3.46
5012 5857 3.019564 AGCATGGCTATTGGACTGTTTC 58.980 45.455 0.00 0.00 36.99 2.78
5013 5858 3.019564 GAGCATGGCTATTGGACTGTTT 58.980 45.455 0.00 0.00 39.88 2.83
5014 5859 2.025981 TGAGCATGGCTATTGGACTGTT 60.026 45.455 0.00 0.00 39.88 3.16
5015 5860 1.561076 TGAGCATGGCTATTGGACTGT 59.439 47.619 0.00 0.00 39.88 3.55
5016 5861 1.945394 GTGAGCATGGCTATTGGACTG 59.055 52.381 0.00 0.00 39.88 3.51
5017 5862 1.561076 TGTGAGCATGGCTATTGGACT 59.439 47.619 0.00 0.00 39.88 3.85
5018 5863 2.042686 TGTGAGCATGGCTATTGGAC 57.957 50.000 0.00 0.00 39.88 4.02
5019 5864 2.578786 CATGTGAGCATGGCTATTGGA 58.421 47.619 0.00 0.00 46.47 3.53
5029 5874 3.423749 TCAACATGTTCCATGTGAGCAT 58.576 40.909 8.48 7.41 44.74 3.79
5030 5875 2.861274 TCAACATGTTCCATGTGAGCA 58.139 42.857 8.48 3.87 38.65 4.26
5031 5876 3.766151 CATCAACATGTTCCATGTGAGC 58.234 45.455 8.48 0.00 31.80 4.26
5032 5877 3.191791 TGCATCAACATGTTCCATGTGAG 59.808 43.478 20.69 7.06 31.86 3.51
5033 5878 3.155501 TGCATCAACATGTTCCATGTGA 58.844 40.909 20.69 11.87 31.86 3.58
5034 5879 3.507786 CTGCATCAACATGTTCCATGTG 58.492 45.455 20.69 13.69 31.86 3.21
5035 5880 2.494471 CCTGCATCAACATGTTCCATGT 59.506 45.455 20.69 4.08 31.86 3.21
5036 5881 2.494471 ACCTGCATCAACATGTTCCATG 59.506 45.455 8.48 14.32 31.86 3.66
5037 5882 2.811410 ACCTGCATCAACATGTTCCAT 58.189 42.857 8.48 0.63 31.86 3.41
5038 5883 2.291209 ACCTGCATCAACATGTTCCA 57.709 45.000 8.48 0.00 31.86 3.53
5039 5884 2.414559 CGAACCTGCATCAACATGTTCC 60.415 50.000 8.48 0.00 40.18 3.62
5040 5885 2.855180 CGAACCTGCATCAACATGTTC 58.145 47.619 8.48 0.00 40.02 3.18
5041 5886 1.068333 GCGAACCTGCATCAACATGTT 60.068 47.619 4.92 4.92 32.07 2.71
5042 5887 0.523072 GCGAACCTGCATCAACATGT 59.477 50.000 0.00 0.00 31.86 3.21
5043 5888 0.806868 AGCGAACCTGCATCAACATG 59.193 50.000 0.00 0.00 37.31 3.21
5044 5889 0.806868 CAGCGAACCTGCATCAACAT 59.193 50.000 0.00 0.00 37.31 2.71
5045 5890 2.246841 CAGCGAACCTGCATCAACA 58.753 52.632 0.00 0.00 37.31 3.33
5053 5898 2.811317 GGACGAGCAGCGAACCTG 60.811 66.667 5.99 0.00 44.57 4.00
5054 5899 2.650116 ATGGACGAGCAGCGAACCT 61.650 57.895 5.99 0.00 44.57 3.50
5055 5900 2.125512 ATGGACGAGCAGCGAACC 60.126 61.111 5.99 8.88 44.57 3.62
5056 5901 3.084579 CATGGACGAGCAGCGAAC 58.915 61.111 5.99 0.00 44.57 3.95
5057 5902 1.944234 TAGCATGGACGAGCAGCGAA 61.944 55.000 5.99 0.00 44.57 4.70
5058 5903 1.944234 TTAGCATGGACGAGCAGCGA 61.944 55.000 5.99 0.00 44.57 4.93
5060 5905 0.460987 ACTTAGCATGGACGAGCAGC 60.461 55.000 0.00 0.00 0.00 5.25
5061 5906 1.929836 GAACTTAGCATGGACGAGCAG 59.070 52.381 0.00 0.00 0.00 4.24
5062 5907 1.735700 CGAACTTAGCATGGACGAGCA 60.736 52.381 0.00 0.00 0.00 4.26
5063 5908 0.924090 CGAACTTAGCATGGACGAGC 59.076 55.000 0.00 0.00 0.00 5.03
5064 5909 2.186076 GTCGAACTTAGCATGGACGAG 58.814 52.381 0.00 0.00 0.00 4.18
5065 5910 1.135199 GGTCGAACTTAGCATGGACGA 60.135 52.381 0.00 0.00 0.00 4.20
5066 5911 1.135083 AGGTCGAACTTAGCATGGACG 60.135 52.381 0.00 0.00 0.00 4.79
5067 5912 2.674796 AGGTCGAACTTAGCATGGAC 57.325 50.000 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.