Multiple sequence alignment - TraesCS1B01G067300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G067300 chr1B 100.000 2617 0 0 1 2617 51589005 51591621 0.000000e+00 4833.0
1 TraesCS1B01G067300 chr1B 81.034 638 79 26 885 1485 51299685 51300317 1.100000e-128 470.0
2 TraesCS1B01G067300 chr1B 81.818 594 60 29 920 1485 51538827 51539400 3.070000e-124 455.0
3 TraesCS1B01G067300 chr1B 81.008 595 63 31 920 1485 51546231 51546804 6.690000e-116 427.0
4 TraesCS1B01G067300 chr1B 80.785 484 70 16 1680 2153 51942584 51943054 8.910000e-95 357.0
5 TraesCS1B01G067300 chr1B 91.379 58 5 0 201 258 591106831 591106888 2.160000e-11 80.5
6 TraesCS1B01G067300 chr1D 84.443 1382 104 59 428 1744 33711630 33712965 0.000000e+00 1258.0
7 TraesCS1B01G067300 chr1D 84.444 495 54 18 990 1470 33663720 33664205 1.420000e-127 466.0
8 TraesCS1B01G067300 chr1D 87.119 295 22 7 2333 2614 33713396 33713687 1.170000e-83 320.0
9 TraesCS1B01G067300 chr1D 84.444 270 18 11 1 257 202943245 202942987 7.230000e-61 244.0
10 TraesCS1B01G067300 chr1D 92.523 107 5 3 2221 2325 491412132 491412237 1.620000e-32 150.0
11 TraesCS1B01G067300 chr1D 83.000 100 14 1 1 97 467125417 467125318 1.290000e-13 87.9
12 TraesCS1B01G067300 chr1D 84.127 63 8 2 1801 1862 33713007 33713068 2.810000e-05 60.2
13 TraesCS1B01G067300 chr1A 82.759 1131 106 52 635 1715 32453983 32455074 0.000000e+00 926.0
14 TraesCS1B01G067300 chr1A 82.255 603 59 27 916 1474 32291238 32291836 6.550000e-131 477.0
15 TraesCS1B01G067300 chr1A 81.272 566 69 26 946 1485 32451238 32451792 8.660000e-115 424.0
16 TraesCS1B01G067300 chr1A 80.363 606 77 24 886 1478 32376199 32376775 3.110000e-114 422.0
17 TraesCS1B01G067300 chr1A 92.606 284 16 4 2333 2614 32456290 32456570 1.130000e-108 403.0
18 TraesCS1B01G067300 chr1A 86.387 382 35 10 1103 1475 32302214 32302587 4.060000e-108 401.0
19 TraesCS1B01G067300 chr1A 89.520 229 22 2 1923 2151 32455945 32456171 3.300000e-74 289.0
20 TraesCS1B01G067300 chr1A 88.235 153 6 5 429 578 32453824 32453967 3.460000e-39 172.0
21 TraesCS1B01G067300 chr6B 95.402 435 9 1 1 424 149151428 149151862 0.000000e+00 682.0
22 TraesCS1B01G067300 chr7B 85.609 271 26 6 1 258 707607296 707607026 3.320000e-69 272.0
23 TraesCS1B01G067300 chr7B 94.949 99 4 1 2236 2333 408044666 408044764 1.250000e-33 154.0
24 TraesCS1B01G067300 chr7B 93.939 99 6 0 330 428 707606886 707606788 1.620000e-32 150.0
25 TraesCS1B01G067300 chr7B 88.136 59 1 1 255 307 707607015 707606957 6.050000e-07 65.8
26 TraesCS1B01G067300 chr4D 92.896 183 10 3 79 258 82241053 82240871 2.000000e-66 263.0
27 TraesCS1B01G067300 chr3A 83.984 256 23 8 1 238 39731558 39731813 2.030000e-56 230.0
28 TraesCS1B01G067300 chr3A 94.000 100 5 1 2227 2325 469077423 469077522 1.620000e-32 150.0
29 TraesCS1B01G067300 chr3A 83.193 119 19 1 308 426 39731833 39731950 9.900000e-20 108.0
30 TraesCS1B01G067300 chr4A 84.305 223 21 8 45 254 696092981 696093202 3.410000e-49 206.0
31 TraesCS1B01G067300 chr4A 93.277 119 8 0 308 426 492384373 492384255 2.680000e-40 176.0
32 TraesCS1B01G067300 chr4A 90.909 88 6 2 168 254 118953563 118953649 1.650000e-22 117.0
33 TraesCS1B01G067300 chr5D 92.063 126 9 1 134 258 559051470 559051595 2.680000e-40 176.0
34 TraesCS1B01G067300 chr5D 93.333 105 5 2 2223 2327 76160211 76160313 1.250000e-33 154.0
35 TraesCS1B01G067300 chr5B 97.849 93 1 1 2236 2327 711422648 711422740 2.700000e-35 159.0
36 TraesCS1B01G067300 chr5B 95.050 101 3 2 2228 2327 579903498 579903399 9.700000e-35 158.0
37 TraesCS1B01G067300 chr5B 97.802 91 1 1 2236 2325 479387331 479387421 3.490000e-34 156.0
38 TraesCS1B01G067300 chr7D 92.453 106 5 3 2223 2327 150359289 150359392 5.840000e-32 148.0
39 TraesCS1B01G067300 chr3D 95.699 93 3 1 2236 2327 67437192 67437100 5.840000e-32 148.0
40 TraesCS1B01G067300 chr6A 86.232 138 14 4 122 254 36728644 36728781 7.550000e-31 145.0
41 TraesCS1B01G067300 chr2A 86.111 108 11 3 321 426 120716193 120716088 2.130000e-21 113.0
42 TraesCS1B01G067300 chr7A 87.629 97 9 1 1 94 546063203 546063299 2.750000e-20 110.0
43 TraesCS1B01G067300 chr6D 92.208 77 6 0 348 424 32412325 32412401 2.750000e-20 110.0
44 TraesCS1B01G067300 chr3B 85.567 97 11 2 1 94 805328568 805328664 5.960000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G067300 chr1B 51589005 51591621 2616 False 4833.000000 4833 100.000000 1 2617 1 chr1B.!!$F4 2616
1 TraesCS1B01G067300 chr1B 51299685 51300317 632 False 470.000000 470 81.034000 885 1485 1 chr1B.!!$F1 600
2 TraesCS1B01G067300 chr1B 51538827 51539400 573 False 455.000000 455 81.818000 920 1485 1 chr1B.!!$F2 565
3 TraesCS1B01G067300 chr1B 51546231 51546804 573 False 427.000000 427 81.008000 920 1485 1 chr1B.!!$F3 565
4 TraesCS1B01G067300 chr1D 33711630 33713687 2057 False 546.066667 1258 85.229667 428 2614 3 chr1D.!!$F3 2186
5 TraesCS1B01G067300 chr1A 32291238 32291836 598 False 477.000000 477 82.255000 916 1474 1 chr1A.!!$F1 558
6 TraesCS1B01G067300 chr1A 32451238 32456570 5332 False 442.800000 926 86.878400 429 2614 5 chr1A.!!$F4 2185
7 TraesCS1B01G067300 chr1A 32376199 32376775 576 False 422.000000 422 80.363000 886 1478 1 chr1A.!!$F3 592

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
234 235 0.037590 TGGCCGGTGCTTAATGAACT 59.962 50.0 1.9 0.0 37.74 3.01 F
279 280 0.099436 GCATCGCATGGAAGTGAACC 59.901 55.0 0.0 0.0 0.00 3.62 F
340 341 0.105039 CGCTGTGTCCCTCTATTCCC 59.895 60.0 0.0 0.0 0.00 3.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1071 3310 0.033011 GAGAGGCCTAGAGGTGGACA 60.033 60.0 4.42 0.0 34.31 4.02 R
1506 3796 0.248661 CACGGACGATCTAGTGGCTG 60.249 60.0 0.00 0.0 0.00 4.85 R
1715 4032 0.780637 ACTGACAGAGACAGAGGGGA 59.219 55.0 10.08 0.0 38.55 4.81 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 9.350357 ACTACGTATAAATTATAGTGGAATGCG 57.650 33.333 0.00 0.00 0.00 4.73
37 38 9.563898 CTACGTATAAATTATAGTGGAATGCGA 57.436 33.333 0.00 0.00 0.00 5.10
38 39 8.236084 ACGTATAAATTATAGTGGAATGCGAC 57.764 34.615 0.00 0.00 0.00 5.19
39 40 7.061441 ACGTATAAATTATAGTGGAATGCGACG 59.939 37.037 0.00 0.00 0.00 5.12
40 41 6.721571 ATAAATTATAGTGGAATGCGACGG 57.278 37.500 0.00 0.00 0.00 4.79
41 42 4.330944 AATTATAGTGGAATGCGACGGA 57.669 40.909 0.00 0.00 0.00 4.69
43 44 2.154854 ATAGTGGAATGCGACGGATG 57.845 50.000 1.48 0.00 0.00 3.51
44 45 0.529773 TAGTGGAATGCGACGGATGC 60.530 55.000 1.48 0.00 0.00 3.91
46 47 2.106074 TGGAATGCGACGGATGCAC 61.106 57.895 9.75 0.00 46.57 4.57
47 48 1.815421 GGAATGCGACGGATGCACT 60.815 57.895 9.75 0.00 46.57 4.40
48 49 0.529773 GGAATGCGACGGATGCACTA 60.530 55.000 9.75 0.00 46.57 2.74
50 51 1.867233 GAATGCGACGGATGCACTATT 59.133 47.619 1.48 0.00 46.57 1.73
51 52 2.812358 ATGCGACGGATGCACTATTA 57.188 45.000 0.00 0.00 46.57 0.98
52 53 2.812358 TGCGACGGATGCACTATTAT 57.188 45.000 0.00 0.00 37.44 1.28
53 54 3.926821 TGCGACGGATGCACTATTATA 57.073 42.857 0.00 0.00 37.44 0.98
54 55 4.450082 TGCGACGGATGCACTATTATAT 57.550 40.909 0.00 0.00 37.44 0.86
56 57 5.956642 TGCGACGGATGCACTATTATATTA 58.043 37.500 0.00 0.00 37.44 0.98
57 58 6.569780 TGCGACGGATGCACTATTATATTAT 58.430 36.000 0.00 0.00 37.44 1.28
61 62 9.302345 CGACGGATGCACTATTATATTATTCTT 57.698 33.333 0.00 0.00 0.00 2.52
80 81 7.823149 ATTCTTTGCATATTTCAGAAAGTGC 57.177 32.000 21.07 21.07 36.83 4.40
81 82 6.330004 TCTTTGCATATTTCAGAAAGTGCA 57.670 33.333 24.38 24.38 41.28 4.57
82 83 6.747125 TCTTTGCATATTTCAGAAAGTGCAA 58.253 32.000 29.62 29.62 45.67 4.08
85 86 7.966246 TTGCATATTTCAGAAAGTGCAAATT 57.034 28.000 30.42 7.50 45.04 1.82
86 87 7.585286 TGCATATTTCAGAAAGTGCAAATTC 57.415 32.000 25.30 4.90 40.59 2.17
88 89 7.329962 TGCATATTTCAGAAAGTGCAAATTCAG 59.670 33.333 25.30 7.03 40.59 3.02
89 90 7.330208 GCATATTTCAGAAAGTGCAAATTCAGT 59.670 33.333 22.18 0.00 36.52 3.41
90 91 8.644619 CATATTTCAGAAAGTGCAAATTCAGTG 58.355 33.333 13.45 5.84 0.00 3.66
103 104 6.421405 GCAAATTCAGTGCAAGTTTTAAAGG 58.579 36.000 0.00 0.00 41.80 3.11
104 105 6.037062 GCAAATTCAGTGCAAGTTTTAAAGGT 59.963 34.615 0.00 0.00 41.80 3.50
106 107 8.450180 CAAATTCAGTGCAAGTTTTAAAGGTTT 58.550 29.630 0.00 0.00 0.00 3.27
107 108 8.560355 AATTCAGTGCAAGTTTTAAAGGTTTT 57.440 26.923 0.00 0.00 0.00 2.43
108 109 7.971183 TTCAGTGCAAGTTTTAAAGGTTTTT 57.029 28.000 0.00 0.00 0.00 1.94
109 110 7.589574 TCAGTGCAAGTTTTAAAGGTTTTTC 57.410 32.000 0.00 0.00 0.00 2.29
110 111 7.382898 TCAGTGCAAGTTTTAAAGGTTTTTCT 58.617 30.769 0.00 0.00 0.00 2.52
112 113 8.503196 CAGTGCAAGTTTTAAAGGTTTTTCTTT 58.497 29.630 0.00 0.00 39.86 2.52
113 114 9.062524 AGTGCAAGTTTTAAAGGTTTTTCTTTT 57.937 25.926 0.00 0.00 37.96 2.27
114 115 9.672086 GTGCAAGTTTTAAAGGTTTTTCTTTTT 57.328 25.926 0.00 0.00 37.96 1.94
115 116 9.885934 TGCAAGTTTTAAAGGTTTTTCTTTTTC 57.114 25.926 0.00 0.00 37.96 2.29
116 117 9.885934 GCAAGTTTTAAAGGTTTTTCTTTTTCA 57.114 25.926 0.00 0.00 37.96 2.69
122 123 9.833182 TTTAAAGGTTTTTCTTTTTCATTGCAC 57.167 25.926 0.00 0.00 37.96 4.57
123 124 7.446001 AAAGGTTTTTCTTTTTCATTGCACA 57.554 28.000 0.00 0.00 33.62 4.57
124 125 7.628769 AAGGTTTTTCTTTTTCATTGCACAT 57.371 28.000 0.00 0.00 0.00 3.21
125 126 8.729805 AAGGTTTTTCTTTTTCATTGCACATA 57.270 26.923 0.00 0.00 0.00 2.29
126 127 8.907222 AGGTTTTTCTTTTTCATTGCACATAT 57.093 26.923 0.00 0.00 0.00 1.78
127 128 9.995003 AGGTTTTTCTTTTTCATTGCACATATA 57.005 25.926 0.00 0.00 0.00 0.86
132 133 9.624697 TTTCTTTTTCATTGCACATATAGTCAC 57.375 29.630 0.00 0.00 0.00 3.67
133 134 8.565896 TCTTTTTCATTGCACATATAGTCACT 57.434 30.769 0.00 0.00 0.00 3.41
134 135 9.665719 TCTTTTTCATTGCACATATAGTCACTA 57.334 29.630 0.00 0.00 0.00 2.74
138 139 9.612066 TTTCATTGCACATATAGTCACTAATGA 57.388 29.630 11.66 3.53 0.00 2.57
140 141 9.783081 TCATTGCACATATAGTCACTAATGATT 57.217 29.630 11.66 0.00 37.14 2.57
141 142 9.821662 CATTGCACATATAGTCACTAATGATTG 57.178 33.333 11.66 4.68 37.14 2.67
142 143 7.425577 TGCACATATAGTCACTAATGATTGC 57.574 36.000 11.66 11.58 37.14 3.56
143 144 6.991531 TGCACATATAGTCACTAATGATTGCA 59.008 34.615 14.44 14.44 37.14 4.08
151 152 7.076842 AGTCACTAATGATTGCATACAACAC 57.923 36.000 0.00 0.00 38.99 3.32
152 153 6.654582 AGTCACTAATGATTGCATACAACACA 59.345 34.615 0.00 0.00 38.99 3.72
153 154 7.337689 AGTCACTAATGATTGCATACAACACAT 59.662 33.333 0.00 0.00 38.99 3.21
154 155 7.970061 GTCACTAATGATTGCATACAACACATT 59.030 33.333 13.67 13.67 42.87 2.71
168 169 0.237235 CACATTGTGTTCCCGTTCGG 59.763 55.000 8.69 4.08 0.00 4.30
169 170 0.107081 ACATTGTGTTCCCGTTCGGA 59.893 50.000 13.08 0.00 39.68 4.55
170 171 1.271163 ACATTGTGTTCCCGTTCGGAT 60.271 47.619 13.08 0.00 41.63 4.18
171 172 2.027929 ACATTGTGTTCCCGTTCGGATA 60.028 45.455 13.08 0.00 41.63 2.59
172 173 2.835580 TTGTGTTCCCGTTCGGATAA 57.164 45.000 13.08 4.09 41.63 1.75
173 174 3.337694 TTGTGTTCCCGTTCGGATAAT 57.662 42.857 13.08 0.00 41.63 1.28
174 175 2.623535 TGTGTTCCCGTTCGGATAATG 58.376 47.619 13.08 0.00 41.63 1.90
175 176 1.937899 GTGTTCCCGTTCGGATAATGG 59.062 52.381 13.08 0.00 41.63 3.16
178 179 0.105964 TCCCGTTCGGATAATGGCTG 59.894 55.000 13.08 0.00 34.86 4.85
180 181 0.937304 CCGTTCGGATAATGGCTGTG 59.063 55.000 5.19 0.00 0.00 3.66
181 182 1.472552 CCGTTCGGATAATGGCTGTGA 60.473 52.381 5.19 0.00 0.00 3.58
182 183 1.593006 CGTTCGGATAATGGCTGTGAC 59.407 52.381 0.00 0.00 0.00 3.67
183 184 1.593006 GTTCGGATAATGGCTGTGACG 59.407 52.381 0.00 0.00 0.00 4.35
186 187 0.179045 GGATAATGGCTGTGACGGCT 60.179 55.000 16.87 0.00 35.82 5.52
187 188 0.940126 GATAATGGCTGTGACGGCTG 59.060 55.000 16.87 0.00 35.82 4.85
189 190 1.836999 TAATGGCTGTGACGGCTGGT 61.837 55.000 16.87 4.06 35.82 4.00
190 191 2.697147 AATGGCTGTGACGGCTGGTT 62.697 55.000 16.87 6.04 35.82 3.67
191 192 2.594592 GGCTGTGACGGCTGGTTT 60.595 61.111 16.87 0.00 35.82 3.27
192 193 2.193536 GGCTGTGACGGCTGGTTTT 61.194 57.895 16.87 0.00 35.82 2.43
193 194 1.733526 GCTGTGACGGCTGGTTTTT 59.266 52.632 9.57 0.00 32.24 1.94
194 195 0.317854 GCTGTGACGGCTGGTTTTTC 60.318 55.000 9.57 0.00 32.24 2.29
196 197 1.676006 CTGTGACGGCTGGTTTTTCTT 59.324 47.619 0.00 0.00 0.00 2.52
197 198 2.096248 TGTGACGGCTGGTTTTTCTTT 58.904 42.857 0.00 0.00 0.00 2.52
199 200 2.098443 GTGACGGCTGGTTTTTCTTTGA 59.902 45.455 0.00 0.00 0.00 2.69
200 201 2.955660 TGACGGCTGGTTTTTCTTTGAT 59.044 40.909 0.00 0.00 0.00 2.57
201 202 3.383185 TGACGGCTGGTTTTTCTTTGATT 59.617 39.130 0.00 0.00 0.00 2.57
202 203 4.580995 TGACGGCTGGTTTTTCTTTGATTA 59.419 37.500 0.00 0.00 0.00 1.75
203 204 5.067936 TGACGGCTGGTTTTTCTTTGATTAA 59.932 36.000 0.00 0.00 0.00 1.40
204 205 6.096673 ACGGCTGGTTTTTCTTTGATTAAT 57.903 33.333 0.00 0.00 0.00 1.40
206 207 7.662897 ACGGCTGGTTTTTCTTTGATTAATTA 58.337 30.769 0.00 0.00 0.00 1.40
207 208 8.145122 ACGGCTGGTTTTTCTTTGATTAATTAA 58.855 29.630 0.00 0.00 0.00 1.40
208 209 8.983724 CGGCTGGTTTTTCTTTGATTAATTAAA 58.016 29.630 1.21 5.40 0.00 1.52
220 221 8.586570 TTTGATTAATTAAATGCTAATGGCCG 57.413 30.769 1.21 0.00 40.92 6.13
221 222 6.686630 TGATTAATTAAATGCTAATGGCCGG 58.313 36.000 1.21 0.00 40.92 6.13
222 223 6.266558 TGATTAATTAAATGCTAATGGCCGGT 59.733 34.615 1.90 0.00 40.92 5.28
223 224 4.320608 AATTAAATGCTAATGGCCGGTG 57.679 40.909 1.90 0.00 40.92 4.94
225 226 0.684153 AAATGCTAATGGCCGGTGCT 60.684 50.000 1.90 0.00 40.92 4.40
226 227 0.684153 AATGCTAATGGCCGGTGCTT 60.684 50.000 1.90 0.00 40.92 3.91
227 228 0.182537 ATGCTAATGGCCGGTGCTTA 59.817 50.000 1.90 0.00 40.92 3.09
229 230 1.318576 GCTAATGGCCGGTGCTTAAT 58.681 50.000 1.90 0.00 37.74 1.40
231 232 2.571212 CTAATGGCCGGTGCTTAATGA 58.429 47.619 1.90 0.00 37.74 2.57
232 233 1.846007 AATGGCCGGTGCTTAATGAA 58.154 45.000 1.90 0.00 37.74 2.57
233 234 1.102978 ATGGCCGGTGCTTAATGAAC 58.897 50.000 1.90 0.00 37.74 3.18
234 235 0.037590 TGGCCGGTGCTTAATGAACT 59.962 50.000 1.90 0.00 37.74 3.01
235 236 1.279558 TGGCCGGTGCTTAATGAACTA 59.720 47.619 1.90 0.00 37.74 2.24
237 238 2.750712 GGCCGGTGCTTAATGAACTAAA 59.249 45.455 1.90 0.00 37.74 1.85
238 239 3.380320 GGCCGGTGCTTAATGAACTAAAT 59.620 43.478 1.90 0.00 37.74 1.40
239 240 4.351192 GCCGGTGCTTAATGAACTAAATG 58.649 43.478 1.90 0.00 33.53 2.32
240 241 4.142469 GCCGGTGCTTAATGAACTAAATGT 60.142 41.667 1.90 0.00 33.53 2.71
241 242 5.621329 GCCGGTGCTTAATGAACTAAATGTT 60.621 40.000 1.90 0.00 36.61 2.71
242 243 5.799936 CCGGTGCTTAATGAACTAAATGTTG 59.200 40.000 0.00 0.00 39.30 3.33
246 247 7.083858 GTGCTTAATGAACTAAATGTTGCTCA 58.916 34.615 0.00 0.00 39.30 4.26
247 248 7.756722 GTGCTTAATGAACTAAATGTTGCTCAT 59.243 33.333 0.00 0.00 39.30 2.90
248 249 7.756272 TGCTTAATGAACTAAATGTTGCTCATG 59.244 33.333 0.00 0.00 39.30 3.07
249 250 7.970061 GCTTAATGAACTAAATGTTGCTCATGA 59.030 33.333 0.00 0.00 39.30 3.07
250 251 9.499585 CTTAATGAACTAAATGTTGCTCATGAG 57.500 33.333 18.84 18.84 39.30 2.90
251 252 7.692460 AATGAACTAAATGTTGCTCATGAGA 57.308 32.000 27.04 8.75 39.30 3.27
253 254 7.692460 TGAACTAAATGTTGCTCATGAGATT 57.308 32.000 27.04 13.59 39.30 2.40
255 256 9.399797 TGAACTAAATGTTGCTCATGAGATTAT 57.600 29.630 27.04 11.02 39.30 1.28
256 257 9.661187 GAACTAAATGTTGCTCATGAGATTATG 57.339 33.333 27.04 13.74 39.30 1.90
258 259 6.459670 AAATGTTGCTCATGAGATTATGCA 57.540 33.333 27.04 13.77 36.81 3.96
260 261 5.432885 TGTTGCTCATGAGATTATGCATG 57.567 39.130 27.04 0.00 42.41 4.06
261 262 4.227538 GTTGCTCATGAGATTATGCATGC 58.772 43.478 27.04 11.82 41.18 4.06
262 263 3.482436 TGCTCATGAGATTATGCATGCA 58.518 40.909 27.04 25.04 41.18 3.96
265 266 4.728021 GCTCATGAGATTATGCATGCATCG 60.728 45.833 35.35 14.73 41.18 3.84
277 278 3.246403 TGCATCGCATGGAAGTGAA 57.754 47.368 0.00 0.00 31.71 3.18
278 279 0.804364 TGCATCGCATGGAAGTGAAC 59.196 50.000 0.00 0.00 31.71 3.18
279 280 0.099436 GCATCGCATGGAAGTGAACC 59.901 55.000 0.00 0.00 0.00 3.62
281 282 0.327924 ATCGCATGGAAGTGAACCCA 59.672 50.000 0.00 0.00 36.79 4.51
282 283 0.605319 TCGCATGGAAGTGAACCCAC 60.605 55.000 0.00 0.00 43.50 4.61
291 292 2.280797 TGAACCCACGTGAGCAGC 60.281 61.111 19.30 2.77 0.00 5.25
292 293 2.280797 GAACCCACGTGAGCAGCA 60.281 61.111 19.30 0.00 0.00 4.41
293 294 2.591715 AACCCACGTGAGCAGCAC 60.592 61.111 19.30 0.07 44.21 4.40
294 295 2.996168 GAACCCACGTGAGCAGCACT 62.996 60.000 19.30 0.00 45.49 4.40
295 296 1.754380 AACCCACGTGAGCAGCACTA 61.754 55.000 19.30 0.00 45.49 2.74
296 297 1.219124 CCCACGTGAGCAGCACTAT 59.781 57.895 19.30 0.00 45.49 2.12
297 298 0.459899 CCCACGTGAGCAGCACTATA 59.540 55.000 19.30 0.00 45.49 1.31
298 299 1.536922 CCCACGTGAGCAGCACTATAG 60.537 57.143 19.30 0.00 45.49 1.31
299 300 1.405463 CCACGTGAGCAGCACTATAGA 59.595 52.381 19.30 0.00 45.49 1.98
300 301 2.035193 CCACGTGAGCAGCACTATAGAT 59.965 50.000 19.30 0.00 45.49 1.98
301 302 3.304257 CACGTGAGCAGCACTATAGATC 58.696 50.000 10.90 0.00 45.49 2.75
302 303 2.952310 ACGTGAGCAGCACTATAGATCA 59.048 45.455 6.78 0.00 45.49 2.92
306 307 3.322828 TGAGCAGCACTATAGATCATGCA 59.677 43.478 6.78 0.00 40.63 3.96
307 308 4.202284 TGAGCAGCACTATAGATCATGCAA 60.202 41.667 6.78 2.00 40.63 4.08
308 309 4.907809 AGCAGCACTATAGATCATGCAAT 58.092 39.130 6.78 0.00 40.63 3.56
309 310 4.936411 AGCAGCACTATAGATCATGCAATC 59.064 41.667 6.78 0.00 40.63 2.67
310 311 4.694037 GCAGCACTATAGATCATGCAATCA 59.306 41.667 6.78 0.00 40.63 2.57
311 312 5.180680 GCAGCACTATAGATCATGCAATCAA 59.819 40.000 6.78 0.00 40.63 2.57
312 313 6.600350 CAGCACTATAGATCATGCAATCAAC 58.400 40.000 6.78 0.00 40.63 3.18
313 314 5.704515 AGCACTATAGATCATGCAATCAACC 59.295 40.000 6.78 0.00 40.63 3.77
314 315 5.106396 GCACTATAGATCATGCAATCAACCC 60.106 44.000 6.78 0.00 38.00 4.11
315 316 5.999600 CACTATAGATCATGCAATCAACCCA 59.000 40.000 6.78 0.00 0.00 4.51
317 318 7.825761 CACTATAGATCATGCAATCAACCCATA 59.174 37.037 6.78 0.00 0.00 2.74
318 319 7.826252 ACTATAGATCATGCAATCAACCCATAC 59.174 37.037 6.78 0.00 0.00 2.39
319 320 4.795469 AGATCATGCAATCAACCCATACA 58.205 39.130 0.00 0.00 0.00 2.29
321 322 5.475909 AGATCATGCAATCAACCCATACATC 59.524 40.000 0.00 0.00 0.00 3.06
323 324 1.675483 TGCAATCAACCCATACATCGC 59.325 47.619 0.00 0.00 0.00 4.58
328 329 1.277842 TCAACCCATACATCGCTGTGT 59.722 47.619 1.33 0.00 36.79 3.72
329 330 1.665679 CAACCCATACATCGCTGTGTC 59.334 52.381 1.33 0.00 36.79 3.67
330 331 0.178068 ACCCATACATCGCTGTGTCC 59.822 55.000 1.33 0.00 36.79 4.02
331 332 0.532862 CCCATACATCGCTGTGTCCC 60.533 60.000 1.33 0.00 36.79 4.46
332 333 0.465705 CCATACATCGCTGTGTCCCT 59.534 55.000 1.33 0.00 36.79 4.20
333 334 1.539065 CCATACATCGCTGTGTCCCTC 60.539 57.143 1.33 0.00 36.79 4.30
334 335 1.410517 CATACATCGCTGTGTCCCTCT 59.589 52.381 1.33 0.00 36.79 3.69
336 337 1.781786 ACATCGCTGTGTCCCTCTAT 58.218 50.000 0.00 0.00 33.22 1.98
337 338 2.111384 ACATCGCTGTGTCCCTCTATT 58.889 47.619 0.00 0.00 33.22 1.73
338 339 2.101582 ACATCGCTGTGTCCCTCTATTC 59.898 50.000 0.00 0.00 33.22 1.75
339 340 1.112113 TCGCTGTGTCCCTCTATTCC 58.888 55.000 0.00 0.00 0.00 3.01
340 341 0.105039 CGCTGTGTCCCTCTATTCCC 59.895 60.000 0.00 0.00 0.00 3.97
341 342 1.204146 GCTGTGTCCCTCTATTCCCA 58.796 55.000 0.00 0.00 0.00 4.37
342 343 1.134371 GCTGTGTCCCTCTATTCCCAC 60.134 57.143 0.00 0.00 0.00 4.61
343 344 2.472029 CTGTGTCCCTCTATTCCCACT 58.528 52.381 0.00 0.00 0.00 4.00
344 345 2.840651 CTGTGTCCCTCTATTCCCACTT 59.159 50.000 0.00 0.00 0.00 3.16
347 348 3.263425 GTGTCCCTCTATTCCCACTTGAA 59.737 47.826 0.00 0.00 0.00 2.69
349 350 2.505819 TCCCTCTATTCCCACTTGAAGC 59.494 50.000 0.00 0.00 0.00 3.86
350 351 2.239654 CCCTCTATTCCCACTTGAAGCA 59.760 50.000 0.00 0.00 0.00 3.91
351 352 3.308402 CCCTCTATTCCCACTTGAAGCAA 60.308 47.826 0.00 0.00 0.00 3.91
353 354 4.952335 CCTCTATTCCCACTTGAAGCAAAT 59.048 41.667 0.00 0.00 0.00 2.32
355 356 3.855689 ATTCCCACTTGAAGCAAATCG 57.144 42.857 0.00 0.00 0.00 3.34
357 358 2.151202 TCCCACTTGAAGCAAATCGAC 58.849 47.619 0.00 0.00 0.00 4.20
358 359 2.154462 CCCACTTGAAGCAAATCGACT 58.846 47.619 0.00 0.00 0.00 4.18
359 360 2.095567 CCCACTTGAAGCAAATCGACTG 60.096 50.000 0.00 0.00 0.00 3.51
360 361 2.807967 CCACTTGAAGCAAATCGACTGA 59.192 45.455 0.56 0.00 0.00 3.41
361 362 3.250762 CCACTTGAAGCAAATCGACTGAA 59.749 43.478 0.56 0.00 0.00 3.02
362 363 4.261155 CCACTTGAAGCAAATCGACTGAAA 60.261 41.667 0.56 0.00 0.00 2.69
363 364 4.672413 CACTTGAAGCAAATCGACTGAAAC 59.328 41.667 0.56 0.00 0.00 2.78
364 365 4.335315 ACTTGAAGCAAATCGACTGAAACA 59.665 37.500 0.56 0.00 0.00 2.83
366 367 5.242069 TGAAGCAAATCGACTGAAACAAA 57.758 34.783 0.56 0.00 0.00 2.83
367 368 5.034152 TGAAGCAAATCGACTGAAACAAAC 58.966 37.500 0.56 0.00 0.00 2.93
368 369 4.900635 AGCAAATCGACTGAAACAAACT 57.099 36.364 0.56 0.00 0.00 2.66
369 370 5.248870 AGCAAATCGACTGAAACAAACTT 57.751 34.783 0.56 0.00 0.00 2.66
370 371 5.036737 AGCAAATCGACTGAAACAAACTTG 58.963 37.500 0.56 0.00 0.00 3.16
373 374 2.993937 TCGACTGAAACAAACTTGGGT 58.006 42.857 0.00 0.00 0.00 4.51
374 375 2.940410 TCGACTGAAACAAACTTGGGTC 59.060 45.455 0.00 0.00 0.00 4.46
375 376 2.680841 CGACTGAAACAAACTTGGGTCA 59.319 45.455 0.00 0.00 0.00 4.02
376 377 3.242739 CGACTGAAACAAACTTGGGTCAG 60.243 47.826 16.83 16.83 43.28 3.51
377 378 3.697166 ACTGAAACAAACTTGGGTCAGT 58.303 40.909 17.73 17.73 44.50 3.41
379 380 2.680841 TGAAACAAACTTGGGTCAGTCG 59.319 45.455 0.00 0.00 0.00 4.18
380 381 2.702592 AACAAACTTGGGTCAGTCGA 57.297 45.000 0.00 0.00 0.00 4.20
381 382 1.949465 ACAAACTTGGGTCAGTCGAC 58.051 50.000 7.70 7.70 41.80 4.20
383 384 1.867233 CAAACTTGGGTCAGTCGACTG 59.133 52.381 34.76 34.76 45.08 3.51
394 395 3.813529 CAGTCGACTGACCCAAATTTC 57.186 47.619 36.73 0.00 46.74 2.17
396 397 3.753272 CAGTCGACTGACCCAAATTTCAT 59.247 43.478 36.73 0.00 46.74 2.57
399 400 5.301805 AGTCGACTGACCCAAATTTCATTTT 59.698 36.000 19.30 0.00 46.74 1.82
400 401 5.629435 GTCGACTGACCCAAATTTCATTTTC 59.371 40.000 8.70 0.00 39.30 2.29
403 404 6.484364 ACTGACCCAAATTTCATTTTCAGT 57.516 33.333 8.34 8.34 40.38 3.41
404 405 6.888105 ACTGACCCAAATTTCATTTTCAGTT 58.112 32.000 8.34 0.00 41.46 3.16
405 406 6.762661 ACTGACCCAAATTTCATTTTCAGTTG 59.237 34.615 8.34 0.00 41.46 3.16
406 407 6.882656 TGACCCAAATTTCATTTTCAGTTGA 58.117 32.000 0.00 0.00 0.00 3.18
407 408 7.507829 TGACCCAAATTTCATTTTCAGTTGAT 58.492 30.769 0.00 0.00 0.00 2.57
408 409 7.992033 TGACCCAAATTTCATTTTCAGTTGATT 59.008 29.630 0.00 0.00 0.00 2.57
409 410 8.156994 ACCCAAATTTCATTTTCAGTTGATTG 57.843 30.769 0.00 0.00 0.00 2.67
410 411 7.992033 ACCCAAATTTCATTTTCAGTTGATTGA 59.008 29.630 0.00 0.00 0.00 2.57
411 412 9.005777 CCCAAATTTCATTTTCAGTTGATTGAT 57.994 29.630 0.00 0.00 0.00 2.57
418 419 8.206325 TCATTTTCAGTTGATTGATCTCTAGC 57.794 34.615 0.00 0.00 0.00 3.42
419 420 6.992063 TTTTCAGTTGATTGATCTCTAGCC 57.008 37.500 0.00 0.00 0.00 3.93
420 421 4.313277 TCAGTTGATTGATCTCTAGCCG 57.687 45.455 0.00 0.00 0.00 5.52
421 422 3.068732 TCAGTTGATTGATCTCTAGCCGG 59.931 47.826 0.00 0.00 0.00 6.13
422 423 3.034635 AGTTGATTGATCTCTAGCCGGT 58.965 45.455 1.90 0.00 0.00 5.28
424 425 1.964223 TGATTGATCTCTAGCCGGTCC 59.036 52.381 1.90 0.00 0.00 4.46
425 426 1.273886 GATTGATCTCTAGCCGGTCCC 59.726 57.143 1.90 0.00 0.00 4.46
426 427 1.107538 TTGATCTCTAGCCGGTCCCG 61.108 60.000 1.90 0.00 39.44 5.14
512 2674 3.672397 CGTATGAATCTGCTTCTCATCGG 59.328 47.826 0.00 0.00 34.75 4.18
585 2747 3.889692 CCACAGCCACCCACCAGT 61.890 66.667 0.00 0.00 0.00 4.00
656 2818 1.284657 CAGCATGTGACCTCGATGAC 58.715 55.000 0.00 0.00 0.00 3.06
670 2833 4.753662 TGACCCCCGCTCGCTAGT 62.754 66.667 0.00 0.00 0.00 2.57
705 2870 3.253432 GCCATTCATCGGTAAGGAAATCC 59.747 47.826 0.00 0.00 0.00 3.01
744 2916 1.134159 TCCCTCAGTCCTACTACGCTC 60.134 57.143 0.00 0.00 0.00 5.03
780 2953 0.335019 AAGTTATTGGACCTGGGGGC 59.665 55.000 0.00 0.00 35.63 5.80
797 2970 2.993471 GCTGGCAACGTGGATTGGG 61.993 63.158 0.00 0.00 42.51 4.12
799 2972 2.988684 GGCAACGTGGATTGGGCA 60.989 61.111 0.00 0.00 0.00 5.36
800 2973 2.568090 GCAACGTGGATTGGGCAG 59.432 61.111 0.00 0.00 0.00 4.85
801 2974 2.268076 GCAACGTGGATTGGGCAGT 61.268 57.895 0.00 0.00 0.00 4.40
802 2975 0.958382 GCAACGTGGATTGGGCAGTA 60.958 55.000 0.00 0.00 0.00 2.74
803 2976 1.086696 CAACGTGGATTGGGCAGTAG 58.913 55.000 0.00 0.00 0.00 2.57
804 2977 0.690762 AACGTGGATTGGGCAGTAGT 59.309 50.000 0.00 0.00 0.00 2.73
805 2978 0.690762 ACGTGGATTGGGCAGTAGTT 59.309 50.000 0.00 0.00 0.00 2.24
806 2979 1.086696 CGTGGATTGGGCAGTAGTTG 58.913 55.000 0.00 0.00 0.00 3.16
820 2993 4.666253 GTTGCCTGCCCTGCTCCA 62.666 66.667 0.00 0.00 0.00 3.86
821 2994 3.664888 TTGCCTGCCCTGCTCCAT 61.665 61.111 0.00 0.00 0.00 3.41
822 2995 2.307942 TTGCCTGCCCTGCTCCATA 61.308 57.895 0.00 0.00 0.00 2.74
823 2996 2.203266 GCCTGCCCTGCTCCATAC 60.203 66.667 0.00 0.00 0.00 2.39
824 2997 2.750657 GCCTGCCCTGCTCCATACT 61.751 63.158 0.00 0.00 0.00 2.12
825 2998 1.147824 CCTGCCCTGCTCCATACTG 59.852 63.158 0.00 0.00 0.00 2.74
826 2999 1.525535 CTGCCCTGCTCCATACTGC 60.526 63.158 0.00 0.00 0.00 4.40
854 3027 1.094073 GCAGTATGGGTGAGCAGCAG 61.094 60.000 0.00 0.00 35.86 4.24
871 3044 3.123620 GTTGCCTGCTCTGCTCCG 61.124 66.667 0.00 0.00 0.00 4.63
875 3048 3.699894 CCTGCTCTGCTCCGGTGT 61.700 66.667 0.00 0.00 0.00 4.16
883 3056 2.342279 GCTCCGGTGTGCAGTACA 59.658 61.111 0.00 0.00 36.82 2.90
894 3073 1.121407 TGCAGTACAGGGTGAGCAGT 61.121 55.000 0.00 0.00 0.00 4.40
895 3074 0.671781 GCAGTACAGGGTGAGCAGTG 60.672 60.000 0.00 0.00 0.00 3.66
927 3110 7.458397 TCCAGAAGGACACTATGTTTGTTAAT 58.542 34.615 0.00 0.00 39.61 1.40
953 3141 4.390909 CACGACTTAAACACCCACTAATCC 59.609 45.833 0.00 0.00 0.00 3.01
977 3165 3.306780 CCGTCTGCCTATATAAACCCCAG 60.307 52.174 0.00 0.00 0.00 4.45
992 3209 2.350134 CAGCAGCCCAGCTTCTCA 59.650 61.111 0.00 0.00 43.70 3.27
995 3212 1.378250 GCAGCCCAGCTTCTCACAT 60.378 57.895 0.00 0.00 36.40 3.21
1014 3235 1.141881 CGGTGTCCATTCTCCTCCG 59.858 63.158 0.00 0.00 0.00 4.63
1017 3238 1.829222 GGTGTCCATTCTCCTCCGTTA 59.171 52.381 0.00 0.00 0.00 3.18
1077 3316 0.969894 AGTAGCTCACTGGTGTCCAC 59.030 55.000 0.00 0.00 35.62 4.02
1110 3355 0.107459 GGGTGAACCAGAGCAGATCC 60.107 60.000 1.16 0.00 39.85 3.36
1213 3467 1.603236 CTCACTCTTCCCAGCGAGCT 61.603 60.000 0.00 0.00 0.00 4.09
1214 3468 1.188219 TCACTCTTCCCAGCGAGCTT 61.188 55.000 0.00 0.00 0.00 3.74
1215 3469 0.739112 CACTCTTCCCAGCGAGCTTC 60.739 60.000 0.00 0.00 0.00 3.86
1257 3531 1.012486 GCTTACCGTGGTCTCGTTGG 61.012 60.000 0.00 0.00 0.00 3.77
1273 3547 1.131883 GTTGGTGTGCATGCAGAGATC 59.868 52.381 23.41 12.75 0.00 2.75
1504 3794 0.674534 CCTCGTCCCATGGTAGCTAC 59.325 60.000 15.88 15.88 0.00 3.58
1506 3796 0.757935 TCGTCCCATGGTAGCTACCC 60.758 60.000 34.76 19.70 45.87 3.69
1507 3797 1.046472 CGTCCCATGGTAGCTACCCA 61.046 60.000 34.76 24.24 45.87 4.51
1508 3798 0.759346 GTCCCATGGTAGCTACCCAG 59.241 60.000 34.76 26.64 45.87 4.45
1558 3848 1.876453 CTGTTCGTCAGTGCGTTCCG 61.876 60.000 6.81 0.00 39.17 4.30
1585 3875 2.882761 TCAGTAGTAGCTGTTCGTGTGT 59.117 45.455 0.00 0.00 37.70 3.72
1592 3885 0.301687 GCTGTTCGTGTGTCTGTGTG 59.698 55.000 0.00 0.00 0.00 3.82
1693 4010 5.793457 GGTAATGTAATCGTTGTTTCAGCAC 59.207 40.000 0.00 0.00 0.00 4.40
1709 4026 4.210093 ACGGACGGACGTGTGCAA 62.210 61.111 0.53 0.00 46.64 4.08
1715 4032 1.209898 CGGACGTGTGCAATGCATT 59.790 52.632 12.38 5.99 41.91 3.56
1731 4775 1.134551 GCATTCCCCTCTGTCTCTGTC 60.135 57.143 0.00 0.00 0.00 3.51
1732 4776 2.182827 CATTCCCCTCTGTCTCTGTCA 58.817 52.381 0.00 0.00 0.00 3.58
1744 4788 2.029828 GTCTCTGTCAGTGTGATCGGTT 60.030 50.000 0.00 0.00 0.00 4.44
1745 4789 2.029918 TCTCTGTCAGTGTGATCGGTTG 60.030 50.000 0.00 0.00 0.00 3.77
1746 4790 1.686587 TCTGTCAGTGTGATCGGTTGT 59.313 47.619 0.00 0.00 0.00 3.32
1747 4791 2.102420 TCTGTCAGTGTGATCGGTTGTT 59.898 45.455 0.00 0.00 0.00 2.83
1748 4792 2.872245 CTGTCAGTGTGATCGGTTGTTT 59.128 45.455 0.00 0.00 0.00 2.83
1749 4793 3.275143 TGTCAGTGTGATCGGTTGTTTT 58.725 40.909 0.00 0.00 0.00 2.43
1750 4794 3.064682 TGTCAGTGTGATCGGTTGTTTTG 59.935 43.478 0.00 0.00 0.00 2.44
1751 4795 3.064820 GTCAGTGTGATCGGTTGTTTTGT 59.935 43.478 0.00 0.00 0.00 2.83
1752 4796 3.064682 TCAGTGTGATCGGTTGTTTTGTG 59.935 43.478 0.00 0.00 0.00 3.33
1753 4797 3.013921 AGTGTGATCGGTTGTTTTGTGT 58.986 40.909 0.00 0.00 0.00 3.72
1754 4798 3.105203 GTGTGATCGGTTGTTTTGTGTG 58.895 45.455 0.00 0.00 0.00 3.82
1756 4800 3.191581 TGTGATCGGTTGTTTTGTGTGTT 59.808 39.130 0.00 0.00 0.00 3.32
1757 4801 4.395231 TGTGATCGGTTGTTTTGTGTGTTA 59.605 37.500 0.00 0.00 0.00 2.41
1787 4831 4.252073 AGCATCTACAAAGAGAACTGCTG 58.748 43.478 1.71 0.00 40.93 4.41
1853 4898 3.004629 AGCTGCGTGAACATTTCATTTGA 59.995 39.130 0.00 0.00 42.47 2.69
1862 4907 7.558137 GTGAACATTTCATTTGAACACATGAC 58.442 34.615 0.00 5.27 42.47 3.06
1901 4946 8.599876 CAAGTTGTTTGCCAAAGAAAATAAAC 57.400 30.769 0.85 0.00 34.07 2.01
1902 4947 8.450180 CAAGTTGTTTGCCAAAGAAAATAAACT 58.550 29.630 0.85 0.00 34.07 2.66
1903 4948 9.660180 AAGTTGTTTGCCAAAGAAAATAAACTA 57.340 25.926 0.85 0.00 34.07 2.24
1904 4949 9.660180 AGTTGTTTGCCAAAGAAAATAAACTAA 57.340 25.926 0.85 0.00 34.07 2.24
1905 4950 9.914923 GTTGTTTGCCAAAGAAAATAAACTAAG 57.085 29.630 0.85 0.00 34.07 2.18
1906 4951 9.877178 TTGTTTGCCAAAGAAAATAAACTAAGA 57.123 25.926 0.00 0.00 0.00 2.10
1907 4952 9.877178 TGTTTGCCAAAGAAAATAAACTAAGAA 57.123 25.926 0.00 0.00 0.00 2.52
1910 4955 9.744468 TTGCCAAAGAAAATAAACTAAGAACTC 57.256 29.630 0.00 0.00 0.00 3.01
1911 4956 8.908903 TGCCAAAGAAAATAAACTAAGAACTCA 58.091 29.630 0.00 0.00 0.00 3.41
1912 4957 9.914131 GCCAAAGAAAATAAACTAAGAACTCAT 57.086 29.630 0.00 0.00 0.00 2.90
1944 4989 8.651391 TGAGTACAAACTTTCTTTTATCACGA 57.349 30.769 0.00 0.00 35.56 4.35
2014 5059 9.394477 ACAAATCGTATTTTCTACTTTCAAAGC 57.606 29.630 0.00 0.00 0.00 3.51
2065 5112 1.816074 TGCGTAGACAACCATTTCCC 58.184 50.000 0.00 0.00 0.00 3.97
2072 5119 2.716424 AGACAACCATTTCCCTGGAAGA 59.284 45.455 0.00 0.00 39.73 2.87
2098 5145 1.228245 GGACTGCACAAGCCTCCAA 60.228 57.895 0.00 0.00 41.13 3.53
2099 5146 1.239968 GGACTGCACAAGCCTCCAAG 61.240 60.000 0.00 0.00 41.13 3.61
2100 5147 0.250467 GACTGCACAAGCCTCCAAGA 60.250 55.000 0.00 0.00 41.13 3.02
2101 5148 0.250640 ACTGCACAAGCCTCCAAGAG 60.251 55.000 0.00 0.00 41.13 2.85
2103 5150 0.250467 TGCACAAGCCTCCAAGAGTC 60.250 55.000 0.00 0.00 41.13 3.36
2147 5194 4.537433 GCGCCCTCGATGCTCCTT 62.537 66.667 0.00 0.00 38.10 3.36
2151 5198 0.392998 GCCCTCGATGCTCCTTCAAA 60.393 55.000 0.15 0.00 0.00 2.69
2154 5201 1.945394 CCTCGATGCTCCTTCAAATGG 59.055 52.381 0.00 0.00 0.00 3.16
2155 5202 1.945394 CTCGATGCTCCTTCAAATGGG 59.055 52.381 0.00 0.00 0.00 4.00
2156 5203 0.383231 CGATGCTCCTTCAAATGGGC 59.617 55.000 0.00 0.00 0.00 5.36
2172 5246 2.679716 GCTCCCAGAGGGCAACAT 59.320 61.111 0.00 0.00 43.94 2.71
2203 5279 2.002586 CACGTCCATCCAATCACACTC 58.997 52.381 0.00 0.00 0.00 3.51
2204 5280 1.902508 ACGTCCATCCAATCACACTCT 59.097 47.619 0.00 0.00 0.00 3.24
2207 5283 3.431346 CGTCCATCCAATCACACTCTGAT 60.431 47.826 0.00 0.00 41.85 2.90
2214 5290 4.402474 TCCAATCACACTCTGATCGTGTAT 59.598 41.667 4.79 0.00 43.26 2.29
2217 5293 6.199154 CCAATCACACTCTGATCGTGTATAAC 59.801 42.308 4.79 0.00 43.26 1.89
2250 5330 4.333417 AGGTACTCCCTTCGTCCG 57.667 61.111 0.00 0.00 42.73 4.79
2251 5331 1.687612 AGGTACTCCCTTCGTCCGA 59.312 57.895 0.00 0.00 42.73 4.55
2252 5332 0.038744 AGGTACTCCCTTCGTCCGAA 59.961 55.000 1.81 1.81 42.73 4.30
2253 5333 0.890683 GGTACTCCCTTCGTCCGAAA 59.109 55.000 3.52 0.00 33.34 3.46
2254 5334 1.273327 GGTACTCCCTTCGTCCGAAAA 59.727 52.381 3.52 0.00 33.34 2.29
2255 5335 2.093816 GGTACTCCCTTCGTCCGAAAAT 60.094 50.000 3.52 0.00 33.34 1.82
2256 5336 3.131046 GGTACTCCCTTCGTCCGAAAATA 59.869 47.826 3.52 0.00 33.34 1.40
2257 5337 3.242549 ACTCCCTTCGTCCGAAAATAC 57.757 47.619 3.52 0.00 33.34 1.89
2258 5338 2.830321 ACTCCCTTCGTCCGAAAATACT 59.170 45.455 3.52 0.00 33.34 2.12
2259 5339 3.260128 ACTCCCTTCGTCCGAAAATACTT 59.740 43.478 3.52 0.00 33.34 2.24
2260 5340 3.592059 TCCCTTCGTCCGAAAATACTTG 58.408 45.455 3.52 0.00 33.34 3.16
2261 5341 3.007182 TCCCTTCGTCCGAAAATACTTGT 59.993 43.478 3.52 0.00 33.34 3.16
2262 5342 3.370061 CCCTTCGTCCGAAAATACTTGTC 59.630 47.826 3.52 0.00 33.34 3.18
2263 5343 3.991773 CCTTCGTCCGAAAATACTTGTCA 59.008 43.478 3.52 0.00 33.34 3.58
2264 5344 4.630069 CCTTCGTCCGAAAATACTTGTCAT 59.370 41.667 3.52 0.00 33.34 3.06
2265 5345 5.220416 CCTTCGTCCGAAAATACTTGTCATC 60.220 44.000 3.52 0.00 33.34 2.92
2266 5346 4.811908 TCGTCCGAAAATACTTGTCATCA 58.188 39.130 0.00 0.00 0.00 3.07
2267 5347 5.231702 TCGTCCGAAAATACTTGTCATCAA 58.768 37.500 0.00 0.00 0.00 2.57
2268 5348 5.697178 TCGTCCGAAAATACTTGTCATCAAA 59.303 36.000 0.00 0.00 32.87 2.69
2269 5349 6.203145 TCGTCCGAAAATACTTGTCATCAAAA 59.797 34.615 0.00 0.00 32.87 2.44
2270 5350 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
2271 5351 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
2272 5352 8.020819 GTCCGAAAATACTTGTCATCAAAATGA 58.979 33.333 0.00 0.00 39.63 2.57
2273 5353 8.572185 TCCGAAAATACTTGTCATCAAAATGAA 58.428 29.630 0.00 0.00 43.42 2.57
2274 5354 9.357652 CCGAAAATACTTGTCATCAAAATGAAT 57.642 29.630 0.00 0.00 43.42 2.57
2319 5399 9.845214 ACTAAAATACATCTAGATACATCCCCT 57.155 33.333 4.54 0.00 0.00 4.79
2326 5406 8.152023 ACATCTAGATACATCCCCTTTTATCC 57.848 38.462 4.54 0.00 0.00 2.59
2327 5407 6.852420 TCTAGATACATCCCCTTTTATCCG 57.148 41.667 0.00 0.00 0.00 4.18
2328 5408 6.558498 TCTAGATACATCCCCTTTTATCCGA 58.442 40.000 0.00 0.00 0.00 4.55
2329 5409 7.014449 TCTAGATACATCCCCTTTTATCCGAA 58.986 38.462 0.00 0.00 0.00 4.30
2330 5410 6.509523 AGATACATCCCCTTTTATCCGAAA 57.490 37.500 0.00 0.00 0.00 3.46
2331 5411 6.906848 AGATACATCCCCTTTTATCCGAAAA 58.093 36.000 0.00 0.00 0.00 2.29
2332 5412 7.526918 AGATACATCCCCTTTTATCCGAAAAT 58.473 34.615 0.00 0.00 0.00 1.82
2333 5413 8.665906 AGATACATCCCCTTTTATCCGAAAATA 58.334 33.333 0.00 0.00 0.00 1.40
2334 5414 6.954487 ACATCCCCTTTTATCCGAAAATAC 57.046 37.500 0.00 0.00 0.00 1.89
2335 5415 6.669631 ACATCCCCTTTTATCCGAAAATACT 58.330 36.000 0.00 0.00 0.00 2.12
2336 5416 7.123383 ACATCCCCTTTTATCCGAAAATACTT 58.877 34.615 0.00 0.00 0.00 2.24
2337 5417 7.068226 ACATCCCCTTTTATCCGAAAATACTTG 59.932 37.037 0.00 0.00 0.00 3.16
2338 5418 6.486941 TCCCCTTTTATCCGAAAATACTTGT 58.513 36.000 0.00 0.00 0.00 3.16
2339 5419 7.631933 TCCCCTTTTATCCGAAAATACTTGTA 58.368 34.615 0.00 0.00 0.00 2.41
2340 5420 7.771826 TCCCCTTTTATCCGAAAATACTTGTAG 59.228 37.037 0.00 0.00 0.00 2.74
2341 5421 7.771826 CCCCTTTTATCCGAAAATACTTGTAGA 59.228 37.037 0.00 0.00 0.00 2.59
2342 5422 9.169592 CCCTTTTATCCGAAAATACTTGTAGAA 57.830 33.333 0.00 0.00 0.00 2.10
2368 5448 0.719465 CGCCTTTTCTTACGCATCGT 59.281 50.000 0.00 0.00 44.35 3.73
2440 5520 6.086371 GCAAGTAAGCAAACGATACTTCAAAC 59.914 38.462 0.00 0.00 37.68 2.93
2448 5528 3.323243 ACGATACTTCAAACAAGACCCG 58.677 45.455 0.00 0.00 0.00 5.28
2548 5629 7.417342 CCATTTGACAAAAGAACAAACCCTCTA 60.417 37.037 4.41 0.00 36.57 2.43
2605 5697 4.098914 TGCACCTACTTCCATGTTCTTT 57.901 40.909 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 9.345517 GTCGCATTCCACTATAATTTATACGTA 57.654 33.333 0.00 0.00 0.00 3.57
13 14 7.061441 CGTCGCATTCCACTATAATTTATACGT 59.939 37.037 0.00 0.00 0.00 3.57
15 16 7.543172 TCCGTCGCATTCCACTATAATTTATAC 59.457 37.037 0.00 0.00 0.00 1.47
16 17 7.604549 TCCGTCGCATTCCACTATAATTTATA 58.395 34.615 0.00 0.00 0.00 0.98
17 18 6.460781 TCCGTCGCATTCCACTATAATTTAT 58.539 36.000 0.00 0.00 0.00 1.40
18 19 5.845103 TCCGTCGCATTCCACTATAATTTA 58.155 37.500 0.00 0.00 0.00 1.40
19 20 4.699637 TCCGTCGCATTCCACTATAATTT 58.300 39.130 0.00 0.00 0.00 1.82
21 22 4.245660 CATCCGTCGCATTCCACTATAAT 58.754 43.478 0.00 0.00 0.00 1.28
22 23 3.649073 CATCCGTCGCATTCCACTATAA 58.351 45.455 0.00 0.00 0.00 0.98
25 26 0.529773 GCATCCGTCGCATTCCACTA 60.530 55.000 0.00 0.00 0.00 2.74
27 28 2.106074 TGCATCCGTCGCATTCCAC 61.106 57.895 0.00 0.00 33.55 4.02
28 29 2.106074 GTGCATCCGTCGCATTCCA 61.106 57.895 0.00 0.00 42.32 3.53
29 30 0.529773 TAGTGCATCCGTCGCATTCC 60.530 55.000 0.00 0.00 42.32 3.01
30 31 1.502231 ATAGTGCATCCGTCGCATTC 58.498 50.000 0.00 0.00 42.32 2.67
32 33 2.812358 TAATAGTGCATCCGTCGCAT 57.188 45.000 0.00 0.00 42.32 4.73
34 35 7.435488 AGAATAATATAATAGTGCATCCGTCGC 59.565 37.037 0.00 0.00 0.00 5.19
35 36 8.858003 AGAATAATATAATAGTGCATCCGTCG 57.142 34.615 0.00 0.00 0.00 5.12
38 39 9.708222 GCAAAGAATAATATAATAGTGCATCCG 57.292 33.333 0.00 0.00 0.00 4.18
54 55 9.357652 GCACTTTCTGAAATATGCAAAGAATAA 57.642 29.630 23.78 0.00 34.36 1.40
56 57 7.380536 TGCACTTTCTGAAATATGCAAAGAAT 58.619 30.769 26.80 0.00 38.60 2.40
57 58 6.747125 TGCACTTTCTGAAATATGCAAAGAA 58.253 32.000 26.80 12.69 38.60 2.52
61 62 7.656542 TGAATTTGCACTTTCTGAAATATGCAA 59.343 29.630 30.84 30.84 44.13 4.08
62 63 7.153315 TGAATTTGCACTTTCTGAAATATGCA 58.847 30.769 25.91 25.91 39.30 3.96
63 64 7.330208 ACTGAATTTGCACTTTCTGAAATATGC 59.670 33.333 22.74 22.74 34.63 3.14
65 66 7.330208 GCACTGAATTTGCACTTTCTGAAATAT 59.670 33.333 16.71 0.00 39.93 1.28
66 67 6.642131 GCACTGAATTTGCACTTTCTGAAATA 59.358 34.615 16.71 0.00 39.93 1.40
67 68 5.464389 GCACTGAATTTGCACTTTCTGAAAT 59.536 36.000 16.71 0.00 39.93 2.17
68 69 4.805192 GCACTGAATTTGCACTTTCTGAAA 59.195 37.500 16.71 2.44 39.93 2.69
79 80 6.037062 ACCTTTAAAACTTGCACTGAATTTGC 59.963 34.615 0.00 0.00 40.63 3.68
80 81 7.538303 ACCTTTAAAACTTGCACTGAATTTG 57.462 32.000 0.00 0.00 0.00 2.32
81 82 8.560355 AAACCTTTAAAACTTGCACTGAATTT 57.440 26.923 0.00 0.00 0.00 1.82
82 83 8.560355 AAAACCTTTAAAACTTGCACTGAATT 57.440 26.923 0.00 0.00 0.00 2.17
84 85 7.875554 AGAAAAACCTTTAAAACTTGCACTGAA 59.124 29.630 0.00 0.00 0.00 3.02
85 86 7.382898 AGAAAAACCTTTAAAACTTGCACTGA 58.617 30.769 0.00 0.00 0.00 3.41
86 87 7.595311 AGAAAAACCTTTAAAACTTGCACTG 57.405 32.000 0.00 0.00 0.00 3.66
88 89 9.672086 AAAAAGAAAAACCTTTAAAACTTGCAC 57.328 25.926 0.00 0.00 35.50 4.57
89 90 9.885934 GAAAAAGAAAAACCTTTAAAACTTGCA 57.114 25.926 0.00 0.00 35.50 4.08
90 91 9.885934 TGAAAAAGAAAAACCTTTAAAACTTGC 57.114 25.926 0.00 0.00 35.50 4.01
96 97 9.833182 GTGCAATGAAAAAGAAAAACCTTTAAA 57.167 25.926 0.00 0.00 35.50 1.52
97 98 9.003658 TGTGCAATGAAAAAGAAAAACCTTTAA 57.996 25.926 0.00 0.00 35.50 1.52
98 99 8.553459 TGTGCAATGAAAAAGAAAAACCTTTA 57.447 26.923 0.00 0.00 35.50 1.85
99 100 7.446001 TGTGCAATGAAAAAGAAAAACCTTT 57.554 28.000 0.00 0.00 37.94 3.11
100 101 7.628769 ATGTGCAATGAAAAAGAAAAACCTT 57.371 28.000 0.00 0.00 0.00 3.50
101 102 8.907222 ATATGTGCAATGAAAAAGAAAAACCT 57.093 26.923 0.00 0.00 0.00 3.50
106 107 9.624697 GTGACTATATGTGCAATGAAAAAGAAA 57.375 29.630 0.00 0.00 0.00 2.52
107 108 9.013229 AGTGACTATATGTGCAATGAAAAAGAA 57.987 29.630 0.00 0.00 0.00 2.52
108 109 8.565896 AGTGACTATATGTGCAATGAAAAAGA 57.434 30.769 0.00 0.00 0.00 2.52
112 113 9.612066 TCATTAGTGACTATATGTGCAATGAAA 57.388 29.630 0.00 0.00 0.00 2.69
113 114 9.783081 ATCATTAGTGACTATATGTGCAATGAA 57.217 29.630 7.10 0.00 37.14 2.57
114 115 9.783081 AATCATTAGTGACTATATGTGCAATGA 57.217 29.630 5.84 5.84 37.14 2.57
115 116 9.821662 CAATCATTAGTGACTATATGTGCAATG 57.178 33.333 0.00 0.00 37.14 2.82
116 117 8.509690 GCAATCATTAGTGACTATATGTGCAAT 58.490 33.333 16.19 0.00 37.14 3.56
117 118 7.498570 TGCAATCATTAGTGACTATATGTGCAA 59.501 33.333 18.73 10.50 37.14 4.08
118 119 6.991531 TGCAATCATTAGTGACTATATGTGCA 59.008 34.615 17.96 17.96 37.14 4.57
125 126 8.830580 GTGTTGTATGCAATCATTAGTGACTAT 58.169 33.333 0.00 0.00 37.14 2.12
126 127 7.821846 TGTGTTGTATGCAATCATTAGTGACTA 59.178 33.333 0.00 0.00 37.14 2.59
127 128 6.654582 TGTGTTGTATGCAATCATTAGTGACT 59.345 34.615 0.00 0.00 37.14 3.41
128 129 6.841119 TGTGTTGTATGCAATCATTAGTGAC 58.159 36.000 0.00 0.00 37.14 3.67
129 130 7.628769 ATGTGTTGTATGCAATCATTAGTGA 57.371 32.000 0.00 0.00 36.92 3.41
130 131 7.756272 ACAATGTGTTGTATGCAATCATTAGTG 59.244 33.333 20.09 14.99 46.37 2.74
131 132 7.756272 CACAATGTGTTGTATGCAATCATTAGT 59.244 33.333 20.09 17.75 46.49 2.24
132 133 7.756272 ACACAATGTGTTGTATGCAATCATTAG 59.244 33.333 13.98 18.14 45.08 1.73
133 134 7.600960 ACACAATGTGTTGTATGCAATCATTA 58.399 30.769 13.98 8.10 45.08 1.90
134 135 6.457355 ACACAATGTGTTGTATGCAATCATT 58.543 32.000 13.98 17.17 45.08 2.57
135 136 6.028146 ACACAATGTGTTGTATGCAATCAT 57.972 33.333 13.98 5.57 45.08 2.45
136 137 5.450592 ACACAATGTGTTGTATGCAATCA 57.549 34.783 13.98 3.41 45.08 2.57
148 149 4.695953 TCCGAACGGGAACACAATGTGT 62.696 50.000 13.98 13.98 43.62 3.72
149 150 0.237235 CCGAACGGGAACACAATGTG 59.763 55.000 12.40 12.40 38.47 3.21
151 152 2.921374 TCCGAACGGGAACACAATG 58.079 52.632 13.29 0.00 43.62 2.82
160 161 0.179056 ACAGCCATTATCCGAACGGG 60.179 55.000 13.29 0.00 35.59 5.28
162 163 1.593006 GTCACAGCCATTATCCGAACG 59.407 52.381 0.00 0.00 0.00 3.95
164 165 1.472552 CCGTCACAGCCATTATCCGAA 60.473 52.381 0.00 0.00 0.00 4.30
168 169 0.940126 CAGCCGTCACAGCCATTATC 59.060 55.000 0.00 0.00 0.00 1.75
169 170 0.464373 CCAGCCGTCACAGCCATTAT 60.464 55.000 0.00 0.00 0.00 1.28
170 171 1.078497 CCAGCCGTCACAGCCATTA 60.078 57.895 0.00 0.00 0.00 1.90
171 172 2.360350 CCAGCCGTCACAGCCATT 60.360 61.111 0.00 0.00 0.00 3.16
172 173 2.697147 AAACCAGCCGTCACAGCCAT 62.697 55.000 0.00 0.00 0.00 4.40
173 174 2.902423 AAAACCAGCCGTCACAGCCA 62.902 55.000 0.00 0.00 0.00 4.75
174 175 1.734388 AAAAACCAGCCGTCACAGCC 61.734 55.000 0.00 0.00 0.00 4.85
175 176 0.317854 GAAAAACCAGCCGTCACAGC 60.318 55.000 0.00 0.00 0.00 4.40
178 179 2.098443 TCAAAGAAAAACCAGCCGTCAC 59.902 45.455 0.00 0.00 0.00 3.67
180 181 3.643159 ATCAAAGAAAAACCAGCCGTC 57.357 42.857 0.00 0.00 0.00 4.79
181 182 5.523438 TTAATCAAAGAAAAACCAGCCGT 57.477 34.783 0.00 0.00 0.00 5.68
182 183 8.527567 TTAATTAATCAAAGAAAAACCAGCCG 57.472 30.769 0.00 0.00 0.00 5.52
193 194 9.762933 GGCCATTAGCATTTAATTAATCAAAGA 57.237 29.630 0.00 0.00 46.50 2.52
194 195 8.702438 CGGCCATTAGCATTTAATTAATCAAAG 58.298 33.333 2.24 0.00 46.50 2.77
196 197 7.151308 CCGGCCATTAGCATTTAATTAATCAA 58.849 34.615 2.24 0.00 46.50 2.57
197 198 6.266558 ACCGGCCATTAGCATTTAATTAATCA 59.733 34.615 0.00 0.00 46.50 2.57
199 200 6.454795 CACCGGCCATTAGCATTTAATTAAT 58.545 36.000 0.00 0.00 46.50 1.40
200 201 5.737635 GCACCGGCCATTAGCATTTAATTAA 60.738 40.000 0.00 0.00 46.50 1.40
201 202 4.261825 GCACCGGCCATTAGCATTTAATTA 60.262 41.667 0.00 0.00 46.50 1.40
202 203 3.492482 GCACCGGCCATTAGCATTTAATT 60.492 43.478 0.00 0.00 46.50 1.40
203 204 2.035832 GCACCGGCCATTAGCATTTAAT 59.964 45.455 0.00 0.00 46.50 1.40
204 205 1.407258 GCACCGGCCATTAGCATTTAA 59.593 47.619 0.00 0.00 46.50 1.52
206 207 0.684153 AGCACCGGCCATTAGCATTT 60.684 50.000 0.00 0.00 46.50 2.32
207 208 0.684153 AAGCACCGGCCATTAGCATT 60.684 50.000 0.00 0.00 46.50 3.56
208 209 0.182537 TAAGCACCGGCCATTAGCAT 59.817 50.000 0.00 0.00 46.50 3.79
209 210 0.034960 TTAAGCACCGGCCATTAGCA 60.035 50.000 0.00 0.00 46.50 3.49
210 211 1.001378 CATTAAGCACCGGCCATTAGC 60.001 52.381 0.00 0.08 42.56 3.09
211 212 2.571212 TCATTAAGCACCGGCCATTAG 58.429 47.619 0.00 0.00 42.56 1.73
212 213 2.685897 GTTCATTAAGCACCGGCCATTA 59.314 45.455 0.00 0.00 42.56 1.90
213 214 1.476488 GTTCATTAAGCACCGGCCATT 59.524 47.619 0.00 0.00 42.56 3.16
214 215 1.102978 GTTCATTAAGCACCGGCCAT 58.897 50.000 0.00 0.00 42.56 4.40
215 216 0.037590 AGTTCATTAAGCACCGGCCA 59.962 50.000 0.00 0.00 42.56 5.36
216 217 2.032680 TAGTTCATTAAGCACCGGCC 57.967 50.000 0.00 0.00 42.56 6.13
217 218 4.142469 ACATTTAGTTCATTAAGCACCGGC 60.142 41.667 0.00 0.00 41.61 6.13
220 221 6.389906 AGCAACATTTAGTTCATTAAGCACC 58.610 36.000 0.00 0.00 38.74 5.01
221 222 7.083858 TGAGCAACATTTAGTTCATTAAGCAC 58.916 34.615 0.00 0.00 38.74 4.40
222 223 7.213216 TGAGCAACATTTAGTTCATTAAGCA 57.787 32.000 0.00 0.00 38.74 3.91
223 224 7.970061 TCATGAGCAACATTTAGTTCATTAAGC 59.030 33.333 0.00 0.00 38.74 3.09
225 226 9.230122 TCTCATGAGCAACATTTAGTTCATTAA 57.770 29.630 18.36 0.00 38.74 1.40
226 227 8.791327 TCTCATGAGCAACATTTAGTTCATTA 57.209 30.769 18.36 0.00 38.74 1.90
227 228 7.692460 TCTCATGAGCAACATTTAGTTCATT 57.308 32.000 18.36 0.00 38.74 2.57
229 230 7.692460 AATCTCATGAGCAACATTTAGTTCA 57.308 32.000 18.36 0.00 38.74 3.18
231 232 8.133627 GCATAATCTCATGAGCAACATTTAGTT 58.866 33.333 18.36 2.87 42.42 2.24
232 233 7.283807 TGCATAATCTCATGAGCAACATTTAGT 59.716 33.333 18.36 0.00 37.07 2.24
233 234 7.645402 TGCATAATCTCATGAGCAACATTTAG 58.355 34.615 18.36 9.12 37.07 1.85
234 235 7.571080 TGCATAATCTCATGAGCAACATTTA 57.429 32.000 18.36 8.65 37.07 1.40
235 236 6.459670 TGCATAATCTCATGAGCAACATTT 57.540 33.333 18.36 6.90 37.07 2.32
237 238 5.564848 GCATGCATAATCTCATGAGCAACAT 60.565 40.000 18.36 11.62 41.82 2.71
238 239 4.261447 GCATGCATAATCTCATGAGCAACA 60.261 41.667 18.36 9.93 41.82 3.33
239 240 4.227538 GCATGCATAATCTCATGAGCAAC 58.772 43.478 18.36 5.58 41.82 4.17
240 241 3.886505 TGCATGCATAATCTCATGAGCAA 59.113 39.130 18.46 1.80 41.82 3.91
241 242 3.482436 TGCATGCATAATCTCATGAGCA 58.518 40.909 18.46 12.47 41.82 4.26
242 243 4.663166 GATGCATGCATAATCTCATGAGC 58.337 43.478 32.27 12.07 41.82 4.26
246 247 3.078837 TGCGATGCATGCATAATCTCAT 58.921 40.909 32.27 9.74 37.44 2.90
247 248 2.496111 TGCGATGCATGCATAATCTCA 58.504 42.857 32.27 19.31 37.44 3.27
260 261 0.099436 GGTTCACTTCCATGCGATGC 59.901 55.000 0.00 0.00 0.00 3.91
261 262 0.734889 GGGTTCACTTCCATGCGATG 59.265 55.000 0.00 0.00 0.00 3.84
262 263 0.327924 TGGGTTCACTTCCATGCGAT 59.672 50.000 0.00 0.00 0.00 4.58
265 266 0.889186 ACGTGGGTTCACTTCCATGC 60.889 55.000 0.00 0.00 42.25 4.06
268 269 0.105964 CTCACGTGGGTTCACTTCCA 59.894 55.000 17.00 0.00 41.53 3.53
269 270 1.228657 GCTCACGTGGGTTCACTTCC 61.229 60.000 18.43 0.00 41.53 3.46
272 273 1.069765 CTGCTCACGTGGGTTCACT 59.930 57.895 18.43 0.00 41.53 3.41
273 274 2.607892 GCTGCTCACGTGGGTTCAC 61.608 63.158 18.43 0.00 40.36 3.18
276 277 2.591715 GTGCTGCTCACGTGGGTT 60.592 61.111 18.43 0.00 35.76 4.11
283 284 3.679025 GCATGATCTATAGTGCTGCTCAC 59.321 47.826 0.00 2.11 45.98 3.51
285 286 3.922910 TGCATGATCTATAGTGCTGCTC 58.077 45.455 12.65 0.00 38.37 4.26
286 287 4.347360 TTGCATGATCTATAGTGCTGCT 57.653 40.909 12.65 0.00 38.37 4.24
287 288 4.694037 TGATTGCATGATCTATAGTGCTGC 59.306 41.667 12.65 11.43 38.37 5.25
288 289 6.348295 GGTTGATTGCATGATCTATAGTGCTG 60.348 42.308 12.65 3.36 38.37 4.41
289 290 5.704515 GGTTGATTGCATGATCTATAGTGCT 59.295 40.000 12.65 0.00 38.37 4.40
291 292 5.999600 TGGGTTGATTGCATGATCTATAGTG 59.000 40.000 0.00 0.00 0.00 2.74
292 293 6.191657 TGGGTTGATTGCATGATCTATAGT 57.808 37.500 0.00 0.00 0.00 2.12
293 294 7.825761 TGTATGGGTTGATTGCATGATCTATAG 59.174 37.037 0.00 0.00 0.00 1.31
294 295 7.688343 TGTATGGGTTGATTGCATGATCTATA 58.312 34.615 0.00 0.00 0.00 1.31
295 296 6.545567 TGTATGGGTTGATTGCATGATCTAT 58.454 36.000 0.00 0.00 0.00 1.98
296 297 5.939447 TGTATGGGTTGATTGCATGATCTA 58.061 37.500 0.00 0.00 0.00 1.98
297 298 4.795469 TGTATGGGTTGATTGCATGATCT 58.205 39.130 0.00 0.00 0.00 2.75
298 299 5.618418 CGATGTATGGGTTGATTGCATGATC 60.618 44.000 0.00 0.00 0.00 2.92
299 300 4.216902 CGATGTATGGGTTGATTGCATGAT 59.783 41.667 0.00 0.00 0.00 2.45
300 301 3.565063 CGATGTATGGGTTGATTGCATGA 59.435 43.478 0.00 0.00 0.00 3.07
301 302 3.854414 GCGATGTATGGGTTGATTGCATG 60.854 47.826 0.00 0.00 0.00 4.06
302 303 2.294233 GCGATGTATGGGTTGATTGCAT 59.706 45.455 0.00 0.00 0.00 3.96
306 307 2.945008 CACAGCGATGTATGGGTTGATT 59.055 45.455 5.75 0.00 0.00 2.57
307 308 2.092968 ACACAGCGATGTATGGGTTGAT 60.093 45.455 5.75 0.00 24.85 2.57
308 309 1.277842 ACACAGCGATGTATGGGTTGA 59.722 47.619 5.75 0.00 24.85 3.18
309 310 1.665679 GACACAGCGATGTATGGGTTG 59.334 52.381 5.75 0.00 31.84 3.77
310 311 1.406887 GGACACAGCGATGTATGGGTT 60.407 52.381 5.75 0.00 31.84 4.11
311 312 0.178068 GGACACAGCGATGTATGGGT 59.822 55.000 5.75 0.00 35.23 4.51
312 313 0.532862 GGGACACAGCGATGTATGGG 60.533 60.000 5.75 0.00 31.24 4.00
313 314 0.465705 AGGGACACAGCGATGTATGG 59.534 55.000 5.75 0.00 31.24 2.74
314 315 1.410517 AGAGGGACACAGCGATGTATG 59.589 52.381 5.75 0.00 31.24 2.39
315 316 1.781786 AGAGGGACACAGCGATGTAT 58.218 50.000 5.75 0.00 31.24 2.29
317 318 1.781786 ATAGAGGGACACAGCGATGT 58.218 50.000 0.00 0.00 34.78 3.06
318 319 2.546795 GGAATAGAGGGACACAGCGATG 60.547 54.545 0.00 0.00 0.00 3.84
319 320 1.689273 GGAATAGAGGGACACAGCGAT 59.311 52.381 0.00 0.00 0.00 4.58
321 322 0.105039 GGGAATAGAGGGACACAGCG 59.895 60.000 0.00 0.00 0.00 5.18
323 324 2.472029 AGTGGGAATAGAGGGACACAG 58.528 52.381 0.00 0.00 0.00 3.66
328 329 2.505819 GCTTCAAGTGGGAATAGAGGGA 59.494 50.000 0.00 0.00 0.00 4.20
329 330 2.239654 TGCTTCAAGTGGGAATAGAGGG 59.760 50.000 0.00 0.00 0.00 4.30
330 331 3.634397 TGCTTCAAGTGGGAATAGAGG 57.366 47.619 0.00 0.00 0.00 3.69
331 332 5.220739 CGATTTGCTTCAAGTGGGAATAGAG 60.221 44.000 0.00 0.00 0.00 2.43
332 333 4.635765 CGATTTGCTTCAAGTGGGAATAGA 59.364 41.667 0.00 0.00 0.00 1.98
333 334 4.635765 TCGATTTGCTTCAAGTGGGAATAG 59.364 41.667 0.00 0.00 0.00 1.73
334 335 4.394920 GTCGATTTGCTTCAAGTGGGAATA 59.605 41.667 0.00 0.00 0.00 1.75
336 337 2.552315 GTCGATTTGCTTCAAGTGGGAA 59.448 45.455 0.00 0.00 0.00 3.97
337 338 2.151202 GTCGATTTGCTTCAAGTGGGA 58.849 47.619 0.00 0.00 0.00 4.37
338 339 2.095567 CAGTCGATTTGCTTCAAGTGGG 60.096 50.000 0.00 0.00 0.00 4.61
339 340 2.807967 TCAGTCGATTTGCTTCAAGTGG 59.192 45.455 0.00 0.00 0.00 4.00
340 341 4.472691 TTCAGTCGATTTGCTTCAAGTG 57.527 40.909 0.00 0.00 0.00 3.16
341 342 4.335315 TGTTTCAGTCGATTTGCTTCAAGT 59.665 37.500 0.00 0.00 0.00 3.16
342 343 4.847633 TGTTTCAGTCGATTTGCTTCAAG 58.152 39.130 0.00 0.00 0.00 3.02
343 344 4.891627 TGTTTCAGTCGATTTGCTTCAA 57.108 36.364 0.00 0.00 0.00 2.69
344 345 4.891627 TTGTTTCAGTCGATTTGCTTCA 57.108 36.364 0.00 0.00 0.00 3.02
347 348 4.900635 AGTTTGTTTCAGTCGATTTGCT 57.099 36.364 0.00 0.00 0.00 3.91
349 350 4.739716 CCCAAGTTTGTTTCAGTCGATTTG 59.260 41.667 0.00 0.00 0.00 2.32
350 351 4.401202 ACCCAAGTTTGTTTCAGTCGATTT 59.599 37.500 0.00 0.00 0.00 2.17
351 352 3.951680 ACCCAAGTTTGTTTCAGTCGATT 59.048 39.130 0.00 0.00 0.00 3.34
353 354 2.940410 GACCCAAGTTTGTTTCAGTCGA 59.060 45.455 0.00 0.00 0.00 4.20
355 356 3.694566 ACTGACCCAAGTTTGTTTCAGTC 59.305 43.478 14.89 5.25 41.07 3.51
357 358 3.242739 CGACTGACCCAAGTTTGTTTCAG 60.243 47.826 13.99 13.99 39.34 3.02
358 359 2.680841 CGACTGACCCAAGTTTGTTTCA 59.319 45.455 0.00 0.00 0.00 2.69
359 360 2.940410 TCGACTGACCCAAGTTTGTTTC 59.060 45.455 0.00 0.00 0.00 2.78
360 361 2.681344 GTCGACTGACCCAAGTTTGTTT 59.319 45.455 8.70 0.00 39.30 2.83
361 362 2.093128 AGTCGACTGACCCAAGTTTGTT 60.093 45.455 19.30 0.00 46.74 2.83
362 363 1.485066 AGTCGACTGACCCAAGTTTGT 59.515 47.619 19.30 0.00 46.74 2.83
363 364 1.867233 CAGTCGACTGACCCAAGTTTG 59.133 52.381 36.73 9.11 46.74 2.93
364 365 2.240493 CAGTCGACTGACCCAAGTTT 57.760 50.000 36.73 0.00 46.74 2.66
373 374 5.976794 AATGAAATTTGGGTCAGTCGACTGA 60.977 40.000 37.87 37.87 41.79 3.41
374 375 3.138304 TGAAATTTGGGTCAGTCGACTG 58.862 45.455 34.76 34.76 45.08 3.51
375 376 3.485463 TGAAATTTGGGTCAGTCGACT 57.515 42.857 13.58 13.58 42.21 4.18
376 377 4.766404 AATGAAATTTGGGTCAGTCGAC 57.234 40.909 7.70 7.70 35.35 4.20
392 393 8.671921 GCTAGAGATCAATCAACTGAAAATGAA 58.328 33.333 0.00 0.00 0.00 2.57
393 394 7.281774 GGCTAGAGATCAATCAACTGAAAATGA 59.718 37.037 0.00 0.00 0.00 2.57
394 395 7.416022 GGCTAGAGATCAATCAACTGAAAATG 58.584 38.462 0.00 0.00 0.00 2.32
396 397 5.582269 CGGCTAGAGATCAATCAACTGAAAA 59.418 40.000 0.00 0.00 0.00 2.29
399 400 3.068732 CCGGCTAGAGATCAATCAACTGA 59.931 47.826 0.00 0.00 0.00 3.41
400 401 3.181471 ACCGGCTAGAGATCAATCAACTG 60.181 47.826 0.00 0.00 0.00 3.16
403 404 2.365617 GGACCGGCTAGAGATCAATCAA 59.634 50.000 0.00 0.00 0.00 2.57
404 405 1.964223 GGACCGGCTAGAGATCAATCA 59.036 52.381 0.00 0.00 0.00 2.57
405 406 1.273886 GGGACCGGCTAGAGATCAATC 59.726 57.143 0.00 0.00 0.00 2.67
406 407 1.343069 GGGACCGGCTAGAGATCAAT 58.657 55.000 0.00 0.00 0.00 2.57
407 408 1.107538 CGGGACCGGCTAGAGATCAA 61.108 60.000 0.00 0.00 35.56 2.57
408 409 1.528542 CGGGACCGGCTAGAGATCA 60.529 63.158 0.00 0.00 35.56 2.92
409 410 0.822532 TTCGGGACCGGCTAGAGATC 60.823 60.000 11.27 0.00 40.25 2.75
410 411 0.178958 ATTCGGGACCGGCTAGAGAT 60.179 55.000 11.27 0.00 40.25 2.75
411 412 0.822532 GATTCGGGACCGGCTAGAGA 60.823 60.000 11.27 0.00 40.25 3.10
415 416 1.822990 GATATGATTCGGGACCGGCTA 59.177 52.381 11.27 0.00 40.25 3.93
416 417 0.608640 GATATGATTCGGGACCGGCT 59.391 55.000 11.27 0.00 40.25 5.52
417 418 0.320374 TGATATGATTCGGGACCGGC 59.680 55.000 11.27 0.00 40.25 6.13
418 419 3.733988 CGTATGATATGATTCGGGACCGG 60.734 52.174 11.27 0.00 40.25 5.28
419 420 3.435566 CGTATGATATGATTCGGGACCG 58.564 50.000 3.96 3.96 41.35 4.79
420 421 3.187700 GCGTATGATATGATTCGGGACC 58.812 50.000 3.65 0.00 0.00 4.46
421 422 2.852413 CGCGTATGATATGATTCGGGAC 59.148 50.000 11.44 0.00 34.23 4.46
422 423 2.159296 CCGCGTATGATATGATTCGGGA 60.159 50.000 16.72 0.00 34.23 5.14
424 425 3.145212 TCCGCGTATGATATGATTCGG 57.855 47.619 4.92 4.19 37.21 4.30
425 426 4.798387 TGAATCCGCGTATGATATGATTCG 59.202 41.667 18.74 0.00 40.41 3.34
426 427 5.275927 CGTGAATCCGCGTATGATATGATTC 60.276 44.000 17.82 17.82 41.03 2.52
512 2674 2.089980 TGTACGCCTAGTCACTCCTTC 58.910 52.381 0.00 0.00 0.00 3.46
656 2818 4.208686 GACACTAGCGAGCGGGGG 62.209 72.222 0.00 0.00 0.00 5.40
705 2870 2.359354 TGGTCATTTCACGGGCCG 60.359 61.111 27.06 27.06 0.00 6.13
780 2953 2.993471 GCCCAATCCACGTTGCCAG 61.993 63.158 0.00 0.00 0.00 4.85
803 2976 2.556840 TATGGAGCAGGGCAGGCAAC 62.557 60.000 0.00 0.00 0.00 4.17
804 2977 2.307942 TATGGAGCAGGGCAGGCAA 61.308 57.895 0.00 0.00 0.00 4.52
805 2978 2.691996 TATGGAGCAGGGCAGGCA 60.692 61.111 0.00 0.00 0.00 4.75
806 2979 2.203266 GTATGGAGCAGGGCAGGC 60.203 66.667 0.00 0.00 0.00 4.85
854 3027 3.123620 CGGAGCAGAGCAGGCAAC 61.124 66.667 0.00 0.00 0.00 4.17
859 3032 2.433838 CACACCGGAGCAGAGCAG 60.434 66.667 9.46 0.00 0.00 4.24
871 3044 0.320771 CTCACCCTGTACTGCACACC 60.321 60.000 0.00 0.00 32.33 4.16
875 3048 1.121407 ACTGCTCACCCTGTACTGCA 61.121 55.000 0.00 0.00 0.00 4.41
883 3056 3.266772 TGGATTTAATCACTGCTCACCCT 59.733 43.478 7.29 0.00 0.00 4.34
894 3073 7.861629 ACATAGTGTCCTTCTGGATTTAATCA 58.138 34.615 7.29 0.00 45.29 2.57
895 3074 8.738645 AACATAGTGTCCTTCTGGATTTAATC 57.261 34.615 0.00 0.00 45.29 1.75
917 3096 6.318144 TGTTTAAGTCGTGGGATTAACAAACA 59.682 34.615 0.00 0.00 31.75 2.83
927 3110 1.129917 TGGGTGTTTAAGTCGTGGGA 58.870 50.000 0.00 0.00 0.00 4.37
953 3141 2.334838 GGTTTATATAGGCAGACGGCG 58.665 52.381 4.80 4.80 46.16 6.46
977 3165 1.375098 GATGTGAGAAGCTGGGCTGC 61.375 60.000 0.00 0.00 39.62 5.25
987 3184 2.567169 AGAATGGACACCGATGTGAGAA 59.433 45.455 0.00 0.00 45.76 2.87
992 3209 1.482593 GAGGAGAATGGACACCGATGT 59.517 52.381 0.00 0.00 43.71 3.06
995 3212 1.320344 CGGAGGAGAATGGACACCGA 61.320 60.000 0.00 0.00 41.09 4.69
1058 3293 0.969894 GTGGACACCAGTGAGCTACT 59.030 55.000 4.48 0.00 41.36 2.57
1070 3309 0.324830 AGAGGCCTAGAGGTGGACAC 60.325 60.000 4.42 0.00 34.31 3.67
1071 3310 0.033011 GAGAGGCCTAGAGGTGGACA 60.033 60.000 4.42 0.00 34.31 4.02
1072 3311 1.104577 CGAGAGGCCTAGAGGTGGAC 61.105 65.000 4.42 0.00 37.57 4.02
1074 3313 3.849064 CGAGAGGCCTAGAGGTGG 58.151 66.667 4.42 0.00 37.57 4.61
1086 3325 1.216710 GCTCTGGTTCACCCGAGAG 59.783 63.158 18.76 13.42 46.43 3.20
1213 3467 0.824109 AGCATCGTCGAGGGAATGAA 59.176 50.000 9.19 0.00 0.00 2.57
1214 3468 0.824109 AAGCATCGTCGAGGGAATGA 59.176 50.000 9.19 0.00 0.00 2.57
1215 3469 2.223829 ACTAAGCATCGTCGAGGGAATG 60.224 50.000 9.19 4.01 0.00 2.67
1257 3531 1.434622 CCCGATCTCTGCATGCACAC 61.435 60.000 18.46 5.60 0.00 3.82
1372 3646 2.665185 AAGTTCTCGGTGCGGCAC 60.665 61.111 24.43 24.43 0.00 5.01
1487 3777 2.816746 GGTAGCTACCATGGGACGA 58.183 57.895 33.64 0.00 45.73 4.20
1504 3794 1.742768 GGACGATCTAGTGGCTGGG 59.257 63.158 0.00 0.00 0.00 4.45
1506 3796 0.248661 CACGGACGATCTAGTGGCTG 60.249 60.000 0.00 0.00 0.00 4.85
1507 3797 2.005960 GCACGGACGATCTAGTGGCT 62.006 60.000 0.00 0.00 35.35 4.75
1508 3798 1.589196 GCACGGACGATCTAGTGGC 60.589 63.158 0.00 0.00 35.35 5.01
1509 3799 1.065928 GGCACGGACGATCTAGTGG 59.934 63.158 0.00 0.00 35.35 4.00
1510 3800 4.711980 GGCACGGACGATCTAGTG 57.288 61.111 0.00 0.16 37.63 2.74
1558 3848 3.500014 GAACAGCTACTACTGACGAACC 58.500 50.000 0.00 0.00 40.25 3.62
1585 3875 4.463539 TCCTACTTTATTACGGCACACAGA 59.536 41.667 0.00 0.00 0.00 3.41
1592 3885 6.510638 CGGTTGATTTCCTACTTTATTACGGC 60.511 42.308 0.00 0.00 0.00 5.68
1649 3950 2.176369 CACACAAAGCAGACACAAACG 58.824 47.619 0.00 0.00 0.00 3.60
1656 3957 5.682943 TTACATTACCACACAAAGCAGAC 57.317 39.130 0.00 0.00 0.00 3.51
1657 3958 5.121611 CGATTACATTACCACACAAAGCAGA 59.878 40.000 0.00 0.00 0.00 4.26
1693 4010 2.736995 ATTGCACACGTCCGTCCG 60.737 61.111 0.00 0.00 0.00 4.79
1709 4026 1.489649 CAGAGACAGAGGGGAATGCAT 59.510 52.381 0.00 0.00 0.00 3.96
1715 4032 0.780637 ACTGACAGAGACAGAGGGGA 59.219 55.000 10.08 0.00 38.55 4.81
1731 4775 3.181501 ACACAAAACAACCGATCACACTG 60.182 43.478 0.00 0.00 0.00 3.66
1732 4776 3.013921 ACACAAAACAACCGATCACACT 58.986 40.909 0.00 0.00 0.00 3.55
1744 4788 9.190858 GATGCTGATTTAATAACACACAAAACA 57.809 29.630 0.00 0.00 0.00 2.83
1745 4789 9.410556 AGATGCTGATTTAATAACACACAAAAC 57.589 29.630 0.00 0.00 0.00 2.43
1748 4792 9.225436 TGTAGATGCTGATTTAATAACACACAA 57.775 29.630 0.00 0.00 0.00 3.33
1749 4793 8.785329 TGTAGATGCTGATTTAATAACACACA 57.215 30.769 0.00 0.00 0.00 3.72
1757 4801 9.678260 AGTTCTCTTTGTAGATGCTGATTTAAT 57.322 29.630 0.00 0.00 0.00 1.40
1772 4816 5.822519 TCACAATAACAGCAGTTCTCTTTGT 59.177 36.000 0.00 2.74 39.15 2.83
1876 4921 8.450180 AGTTTATTTTCTTTGGCAAACAACTTG 58.550 29.630 8.93 0.00 39.19 3.16
1886 4931 9.914131 ATGAGTTCTTAGTTTATTTTCTTTGGC 57.086 29.630 0.00 0.00 0.00 4.52
1909 4954 7.907389 AGAAAGTTTGTACTCATAGTCCATGA 58.093 34.615 0.00 0.00 41.52 3.07
1910 4955 8.553459 AAGAAAGTTTGTACTCATAGTCCATG 57.447 34.615 0.00 0.00 31.99 3.66
1911 4956 9.574516 AAAAGAAAGTTTGTACTCATAGTCCAT 57.425 29.630 0.00 0.00 31.99 3.41
1912 4957 8.974060 AAAAGAAAGTTTGTACTCATAGTCCA 57.026 30.769 0.00 0.00 31.99 4.02
1918 4963 9.268268 TCGTGATAAAAGAAAGTTTGTACTCAT 57.732 29.630 0.00 0.00 31.99 2.90
1919 4964 8.651391 TCGTGATAAAAGAAAGTTTGTACTCA 57.349 30.769 0.00 0.00 31.99 3.41
1920 4965 9.925268 TTTCGTGATAAAAGAAAGTTTGTACTC 57.075 29.630 0.00 0.00 32.25 2.59
1942 4987 9.694520 CTGAATACACATAAGACATTCTTTTCG 57.305 33.333 0.00 0.00 37.89 3.46
1977 5022 6.663944 AAATACGATTTGTAGAGCAGGTTC 57.336 37.500 0.00 0.00 36.25 3.62
2065 5112 2.746362 GCAGTCCAGATTGTTCTTCCAG 59.254 50.000 0.00 0.00 0.00 3.86
2072 5119 1.610522 GCTTGTGCAGTCCAGATTGTT 59.389 47.619 0.00 0.00 39.41 2.83
2098 5145 2.635915 TGTTTCCATACGGTTGGACTCT 59.364 45.455 7.99 0.00 45.42 3.24
2099 5146 3.048337 TGTTTCCATACGGTTGGACTC 57.952 47.619 7.99 5.62 45.42 3.36
2100 5147 3.713826 ATGTTTCCATACGGTTGGACT 57.286 42.857 7.99 0.00 45.42 3.85
2101 5148 4.481463 CAAATGTTTCCATACGGTTGGAC 58.519 43.478 7.99 0.47 45.42 4.02
2103 5150 3.367910 CCCAAATGTTTCCATACGGTTGG 60.368 47.826 0.00 0.00 35.72 3.77
2126 5173 2.817423 GAGCATCGAGGGCGCTTTG 61.817 63.158 7.64 4.90 35.75 2.77
2147 5194 2.001803 CCTCTGGGAGCCCATTTGA 58.998 57.895 9.03 2.28 46.15 2.69
2214 5290 6.888632 AGTACCTCTCTAAACATCTTCCGTTA 59.111 38.462 0.00 0.00 0.00 3.18
2217 5293 5.221087 GGAGTACCTCTCTAAACATCTTCCG 60.221 48.000 0.00 0.00 42.40 4.30
2219 5295 6.151663 GGGAGTACCTCTCTAAACATCTTC 57.848 45.833 0.00 0.00 42.40 2.87
2240 5320 3.332034 ACAAGTATTTTCGGACGAAGGG 58.668 45.455 7.25 0.00 35.38 3.95
2241 5321 3.991773 TGACAAGTATTTTCGGACGAAGG 59.008 43.478 7.25 0.00 35.38 3.46
2242 5322 5.347635 TGATGACAAGTATTTTCGGACGAAG 59.652 40.000 7.25 0.00 35.38 3.79
2243 5323 5.231702 TGATGACAAGTATTTTCGGACGAA 58.768 37.500 2.62 2.62 0.00 3.85
2244 5324 4.811908 TGATGACAAGTATTTTCGGACGA 58.188 39.130 0.00 0.00 0.00 4.20
2245 5325 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
2246 5326 8.020819 TCATTTTGATGACAAGTATTTTCGGAC 58.979 33.333 0.00 0.00 37.32 4.79
2247 5327 8.105097 TCATTTTGATGACAAGTATTTTCGGA 57.895 30.769 0.00 0.00 37.32 4.55
2248 5328 8.741101 TTCATTTTGATGACAAGTATTTTCGG 57.259 30.769 0.00 0.00 37.32 4.30
2293 5373 9.845214 AGGGGATGTATCTAGATGTATTTTAGT 57.155 33.333 15.79 0.00 0.00 2.24
2300 5380 9.268282 GGATAAAAGGGGATGTATCTAGATGTA 57.732 37.037 15.79 4.44 0.00 2.29
2301 5381 7.093289 CGGATAAAAGGGGATGTATCTAGATGT 60.093 40.741 15.79 1.25 0.00 3.06
2302 5382 7.124298 TCGGATAAAAGGGGATGTATCTAGATG 59.876 40.741 15.79 0.00 0.00 2.90
2303 5383 7.189794 TCGGATAAAAGGGGATGTATCTAGAT 58.810 38.462 10.73 10.73 0.00 1.98
2304 5384 6.558498 TCGGATAAAAGGGGATGTATCTAGA 58.442 40.000 0.00 0.00 0.00 2.43
2305 5385 6.852420 TCGGATAAAAGGGGATGTATCTAG 57.148 41.667 0.00 0.00 0.00 2.43
2306 5386 7.621006 TTTCGGATAAAAGGGGATGTATCTA 57.379 36.000 0.00 0.00 0.00 1.98
2307 5387 6.509523 TTTCGGATAAAAGGGGATGTATCT 57.490 37.500 0.00 0.00 0.00 1.98
2308 5388 7.761038 ATTTTCGGATAAAAGGGGATGTATC 57.239 36.000 0.00 0.00 0.00 2.24
2309 5389 8.445588 AGTATTTTCGGATAAAAGGGGATGTAT 58.554 33.333 0.00 0.00 0.00 2.29
2310 5390 7.808218 AGTATTTTCGGATAAAAGGGGATGTA 58.192 34.615 0.00 0.00 0.00 2.29
2311 5391 6.669631 AGTATTTTCGGATAAAAGGGGATGT 58.330 36.000 0.00 0.00 0.00 3.06
2312 5392 7.068226 ACAAGTATTTTCGGATAAAAGGGGATG 59.932 37.037 0.00 0.00 0.00 3.51
2313 5393 7.123383 ACAAGTATTTTCGGATAAAAGGGGAT 58.877 34.615 0.00 0.00 0.00 3.85
2314 5394 6.486941 ACAAGTATTTTCGGATAAAAGGGGA 58.513 36.000 0.00 0.00 0.00 4.81
2315 5395 6.769134 ACAAGTATTTTCGGATAAAAGGGG 57.231 37.500 0.00 0.00 0.00 4.79
2316 5396 8.726870 TCTACAAGTATTTTCGGATAAAAGGG 57.273 34.615 0.00 0.00 0.00 3.95
2324 5404 8.658609 CGGTTTATTTCTACAAGTATTTTCGGA 58.341 33.333 0.00 0.00 0.00 4.55
2325 5405 7.427318 GCGGTTTATTTCTACAAGTATTTTCGG 59.573 37.037 0.00 0.00 0.00 4.30
2326 5406 7.427318 GGCGGTTTATTTCTACAAGTATTTTCG 59.573 37.037 0.00 0.00 0.00 3.46
2327 5407 8.456471 AGGCGGTTTATTTCTACAAGTATTTTC 58.544 33.333 0.00 0.00 0.00 2.29
2328 5408 8.344446 AGGCGGTTTATTTCTACAAGTATTTT 57.656 30.769 0.00 0.00 0.00 1.82
2329 5409 7.933215 AGGCGGTTTATTTCTACAAGTATTT 57.067 32.000 0.00 0.00 0.00 1.40
2330 5410 7.933215 AAGGCGGTTTATTTCTACAAGTATT 57.067 32.000 0.00 0.00 0.00 1.89
2331 5411 7.933215 AAAGGCGGTTTATTTCTACAAGTAT 57.067 32.000 0.00 0.00 0.00 2.12
2332 5412 7.662669 AGAAAAGGCGGTTTATTTCTACAAGTA 59.337 33.333 0.00 0.00 39.61 2.24
2333 5413 6.489022 AGAAAAGGCGGTTTATTTCTACAAGT 59.511 34.615 0.00 0.00 39.61 3.16
2334 5414 6.909909 AGAAAAGGCGGTTTATTTCTACAAG 58.090 36.000 0.00 0.00 39.61 3.16
2335 5415 6.887626 AGAAAAGGCGGTTTATTTCTACAA 57.112 33.333 0.00 0.00 39.61 2.41
2336 5416 6.887626 AAGAAAAGGCGGTTTATTTCTACA 57.112 33.333 0.00 0.00 40.28 2.74
2337 5417 6.957635 CGTAAGAAAAGGCGGTTTATTTCTAC 59.042 38.462 0.00 0.00 40.28 2.59
2338 5418 6.402442 GCGTAAGAAAAGGCGGTTTATTTCTA 60.402 38.462 0.00 0.00 40.28 2.10
2339 5419 5.618418 GCGTAAGAAAAGGCGGTTTATTTCT 60.618 40.000 2.70 0.00 42.30 2.52
2340 5420 4.556135 GCGTAAGAAAAGGCGGTTTATTTC 59.444 41.667 2.70 0.00 43.02 2.17
2341 5421 4.023021 TGCGTAAGAAAAGGCGGTTTATTT 60.023 37.500 2.70 0.00 43.02 1.40
2342 5422 3.502979 TGCGTAAGAAAAGGCGGTTTATT 59.497 39.130 2.90 2.90 43.02 1.40
2425 5505 4.212636 CGGGTCTTGTTTGAAGTATCGTTT 59.787 41.667 0.00 0.00 0.00 3.60
2432 5512 1.937899 CGAACGGGTCTTGTTTGAAGT 59.062 47.619 0.00 0.00 33.39 3.01
2440 5520 3.847105 GCTTGTAAAACGAACGGGTCTTG 60.847 47.826 0.00 0.00 0.00 3.02
2448 5528 2.031420 GGGAGGTGCTTGTAAAACGAAC 60.031 50.000 0.00 0.00 0.00 3.95
2523 5604 6.340522 AGAGGGTTTGTTCTTTTGTCAAATG 58.659 36.000 0.00 1.83 34.41 2.32
2526 5607 6.460953 GCATAGAGGGTTTGTTCTTTTGTCAA 60.461 38.462 0.00 0.00 0.00 3.18
2548 5629 1.559682 ACGTGGAACTTATGAGGGCAT 59.440 47.619 0.00 0.00 34.59 4.40
2576 5657 3.670625 TGGAAGTAGGTGCATACAACAC 58.329 45.455 0.00 0.00 35.21 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.