Multiple sequence alignment - TraesCS1B01G059200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G059200 chr1B 100.000 2648 0 0 1 2648 41793167 41795814 0.000000e+00 4891
1 TraesCS1B01G059200 chrUn 97.386 1377 7 1 1 1377 299179350 299178003 0.000000e+00 2316
2 TraesCS1B01G059200 chrUn 97.386 1377 7 1 1 1377 310334145 310332798 0.000000e+00 2316
3 TraesCS1B01G059200 chr1D 90.335 1045 74 13 749 1781 26256050 26257079 0.000000e+00 1345
4 TraesCS1B01G059200 chr1D 93.370 362 18 5 1 357 26255565 26255925 5.020000e-147 531
5 TraesCS1B01G059200 chr1D 90.303 330 18 6 1779 2105 26257420 26257738 1.130000e-113 420
6 TraesCS1B01G059200 chr1D 96.296 243 9 0 507 749 448103378 448103136 1.480000e-107 399
7 TraesCS1B01G059200 chr4A 97.119 243 7 0 507 749 615435273 615435031 6.820000e-111 411
8 TraesCS1B01G059200 chr4A 93.085 188 11 2 2227 2414 7403692 7403877 9.340000e-70 274
9 TraesCS1B01G059200 chr2D 95.618 251 11 0 507 757 541547530 541547280 1.140000e-108 403
10 TraesCS1B01G059200 chr7B 94.510 255 13 1 507 761 10581491 10581744 2.470000e-105 392
11 TraesCS1B01G059200 chr7B 82.482 137 23 1 2501 2637 579504871 579504736 4.630000e-23 119
12 TraesCS1B01G059200 chr4D 95.161 248 11 1 507 754 303952636 303952390 8.890000e-105 390
13 TraesCS1B01G059200 chr3D 94.118 255 14 1 503 756 532558117 532557863 1.150000e-103 387
14 TraesCS1B01G059200 chr3A 94.048 252 15 0 498 749 300127479 300127730 1.490000e-102 383
15 TraesCS1B01G059200 chr4B 93.583 187 11 1 2227 2413 576200769 576200584 7.220000e-71 278
16 TraesCS1B01G059200 chr4B 83.200 125 20 1 2501 2625 547580513 547580636 2.150000e-21 113
17 TraesCS1B01G059200 chr7A 84.800 125 18 1 2501 2625 125241603 125241726 9.950000e-25 124
18 TraesCS1B01G059200 chr7A 83.721 129 19 2 2497 2625 686159327 686159453 1.290000e-23 121
19 TraesCS1B01G059200 chr7A 84.298 121 18 1 2501 2621 611002235 611002116 1.670000e-22 117
20 TraesCS1B01G059200 chr3B 84.800 125 18 1 2501 2625 747747282 747747159 9.950000e-25 124
21 TraesCS1B01G059200 chr3B 84.615 117 18 0 2532 2648 82299704 82299820 1.670000e-22 117
22 TraesCS1B01G059200 chr6B 83.200 125 20 1 2501 2625 146650815 146650692 2.150000e-21 113
23 TraesCS1B01G059200 chr2B 81.746 126 20 3 2500 2625 91167086 91167208 4.660000e-18 102


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G059200 chr1B 41793167 41795814 2647 False 4891.000000 4891 100.000 1 2648 1 chr1B.!!$F1 2647
1 TraesCS1B01G059200 chrUn 299178003 299179350 1347 True 2316.000000 2316 97.386 1 1377 1 chrUn.!!$R1 1376
2 TraesCS1B01G059200 chrUn 310332798 310334145 1347 True 2316.000000 2316 97.386 1 1377 1 chrUn.!!$R2 1376
3 TraesCS1B01G059200 chr1D 26255565 26257738 2173 False 765.333333 1345 91.336 1 2105 3 chr1D.!!$F1 2104

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
350 384 3.815401 AGCAAATATATCGGCACTGAACC 59.185 43.478 10.21 0.0 0.0 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2186 2579 0.03101 AGGGCTAGTTACCTGGAGGG 60.031 60.0 0.0 0.0 40.27 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
201 207 7.768120 TGCCTTTAATGAGCAAGAAAAGAAAAA 59.232 29.630 0.00 0.00 32.56 1.94
202 208 8.777413 GCCTTTAATGAGCAAGAAAAGAAAAAT 58.223 29.630 0.00 0.00 30.44 1.82
210 216 9.381033 TGAGCAAGAAAAGAAAAATCAAAATCA 57.619 25.926 0.00 0.00 0.00 2.57
350 384 3.815401 AGCAAATATATCGGCACTGAACC 59.185 43.478 10.21 0.00 0.00 3.62
750 785 5.716094 TGCACGTACACATTGACTAGTAAT 58.284 37.500 0.00 0.00 0.00 1.89
776 811 5.896073 AAGGTACTAGGATGGGATTTCTG 57.104 43.478 0.00 0.00 38.49 3.02
1407 1452 4.128388 CGCCCCGGTTTTGATGGC 62.128 66.667 0.00 2.64 38.74 4.40
1425 1470 2.185867 GGGAACTATGTCGGCGCA 59.814 61.111 10.83 3.90 0.00 6.09
1472 1517 2.125326 CCGGTGGTAGATGCGAGGA 61.125 63.158 0.00 0.00 0.00 3.71
1491 1536 1.401905 GATGCGTTCAAGGGGATCAAC 59.598 52.381 0.00 0.00 32.05 3.18
1503 1548 1.679032 GGGATCAACAAGAAGTCCCCG 60.679 57.143 0.00 0.00 42.19 5.73
1535 1580 5.128335 ACATAGATCAACAGATGACAGAGCA 59.872 40.000 0.00 0.00 41.93 4.26
1536 1581 4.757019 AGATCAACAGATGACAGAGCAT 57.243 40.909 0.00 0.00 41.93 3.79
1548 1593 3.422303 GAGCATTGTGGCGTCGCA 61.422 61.111 20.50 0.00 39.27 5.10
1594 1639 9.599866 TTATACACAAGTGATCTGTCCTAAATG 57.400 33.333 7.28 0.00 0.00 2.32
1602 1649 8.088463 AGTGATCTGTCCTAAATGAATCTCTT 57.912 34.615 0.00 0.00 0.00 2.85
1618 1665 9.941325 ATGAATCTCTTCTCATATGTACAATCC 57.059 33.333 0.00 0.00 30.43 3.01
1631 1678 4.456535 TGTACAATCCCCCGTCAATAATG 58.543 43.478 0.00 0.00 0.00 1.90
1635 1682 4.584325 ACAATCCCCCGTCAATAATGAATG 59.416 41.667 0.00 0.00 37.30 2.67
1636 1683 4.722526 ATCCCCCGTCAATAATGAATGA 57.277 40.909 0.00 0.00 37.30 2.57
1659 1706 5.688807 AGCAGGTCATCTAGCAACATATTT 58.311 37.500 0.00 0.00 0.00 1.40
1665 1712 6.238759 GGTCATCTAGCAACATATTTTGGTCC 60.239 42.308 9.45 1.24 38.20 4.46
1672 1719 4.685924 CAACATATTTTGGTCCTGGATGC 58.314 43.478 0.00 0.00 0.00 3.91
1673 1720 3.979911 ACATATTTTGGTCCTGGATGCA 58.020 40.909 0.00 0.00 0.00 3.96
1674 1721 3.956199 ACATATTTTGGTCCTGGATGCAG 59.044 43.478 7.35 7.35 0.00 4.41
1675 1722 2.610438 ATTTTGGTCCTGGATGCAGT 57.390 45.000 13.65 0.00 0.00 4.40
1686 1733 3.181507 CCTGGATGCAGTTGTGAATTACG 60.182 47.826 13.65 0.00 0.00 3.18
1687 1734 2.746904 TGGATGCAGTTGTGAATTACGG 59.253 45.455 0.00 0.00 0.00 4.02
1699 1746 5.057819 TGTGAATTACGGAGCTTAACAACA 58.942 37.500 0.00 0.00 0.00 3.33
1702 1749 5.527951 TGAATTACGGAGCTTAACAACACAA 59.472 36.000 0.00 0.00 0.00 3.33
1728 1775 3.901844 AGAACAGTCTTACCAACTAGGCA 59.098 43.478 0.00 0.00 43.14 4.75
1762 1809 4.445545 GCCGAAAGCGACCAAGCG 62.446 66.667 0.00 0.00 43.00 4.68
1800 2190 3.672397 CGACATATGTGCACTGATCTAGC 59.328 47.826 19.41 0.09 0.00 3.42
1801 2191 4.625028 GACATATGTGCACTGATCTAGCA 58.375 43.478 19.41 3.69 35.63 3.49
1851 2243 3.118261 AGTTCCATAGCACCAGGTACATG 60.118 47.826 0.00 0.00 0.00 3.21
1854 2246 3.134623 TCCATAGCACCAGGTACATGAAG 59.865 47.826 9.54 1.92 0.00 3.02
1862 2254 4.455877 CACCAGGTACATGAAGAAAAGGAC 59.544 45.833 9.54 0.00 0.00 3.85
1874 2266 1.365894 AAAAGGACCCCCTCCCGTTT 61.366 55.000 0.00 0.00 43.48 3.60
1900 2292 0.322187 GCAATCCCACACGGTAAGGT 60.322 55.000 0.00 0.00 0.00 3.50
1910 2302 0.319405 ACGGTAAGGTTGTTCCCTCG 59.681 55.000 0.00 0.00 36.75 4.63
1943 2336 8.448816 CCAATCCTAAAGAGGTATTAAGGGATT 58.551 37.037 0.00 0.00 44.19 3.01
1952 2345 5.681639 AGGTATTAAGGGATTCAAAGGTCG 58.318 41.667 0.00 0.00 0.00 4.79
1959 2352 5.532664 AGGGATTCAAAGGTCGTATACTC 57.467 43.478 0.56 0.00 0.00 2.59
1990 2383 2.036346 ACAAAATGAGACAAAGGCCAGC 59.964 45.455 5.01 0.00 0.00 4.85
2015 2408 8.362639 GCCACAAAATATCAGATCATAACCAAT 58.637 33.333 0.00 0.00 0.00 3.16
2045 2438 7.951591 ACAGGTGCATTCTTTTTAAGTTGTAT 58.048 30.769 0.00 0.00 0.00 2.29
2046 2439 9.073475 ACAGGTGCATTCTTTTTAAGTTGTATA 57.927 29.630 0.00 0.00 0.00 1.47
2047 2440 9.906660 CAGGTGCATTCTTTTTAAGTTGTATAA 57.093 29.630 0.00 0.00 0.00 0.98
2183 2576 2.647529 AAAAATTCTAAAGCGCCGGG 57.352 45.000 2.29 0.00 0.00 5.73
2184 2577 0.815095 AAAATTCTAAAGCGCCGGGG 59.185 50.000 15.40 15.40 0.00 5.73
2185 2578 1.035385 AAATTCTAAAGCGCCGGGGG 61.035 55.000 21.35 6.75 0.00 5.40
2186 2579 4.789123 TTCTAAAGCGCCGGGGGC 62.789 66.667 26.94 26.94 46.75 5.80
2198 2591 3.417779 GGGGGCCCTCCAGGTAAC 61.418 72.222 24.38 0.03 38.26 2.50
2218 2611 2.270527 GCCCTCTGCTCCTCCAAC 59.729 66.667 0.00 0.00 36.87 3.77
2219 2612 2.993853 CCCTCTGCTCCTCCAACC 59.006 66.667 0.00 0.00 0.00 3.77
2220 2613 2.581354 CCTCTGCTCCTCCAACCG 59.419 66.667 0.00 0.00 0.00 4.44
2221 2614 1.984570 CCTCTGCTCCTCCAACCGA 60.985 63.158 0.00 0.00 0.00 4.69
2222 2615 1.544825 CCTCTGCTCCTCCAACCGAA 61.545 60.000 0.00 0.00 0.00 4.30
2223 2616 0.108424 CTCTGCTCCTCCAACCGAAG 60.108 60.000 0.00 0.00 0.00 3.79
2224 2617 1.743252 CTGCTCCTCCAACCGAAGC 60.743 63.158 0.00 0.00 0.00 3.86
2225 2618 2.436824 GCTCCTCCAACCGAAGCC 60.437 66.667 0.00 0.00 0.00 4.35
2226 2619 2.960688 GCTCCTCCAACCGAAGCCT 61.961 63.158 0.00 0.00 0.00 4.58
2227 2620 1.614241 GCTCCTCCAACCGAAGCCTA 61.614 60.000 0.00 0.00 0.00 3.93
2228 2621 1.123928 CTCCTCCAACCGAAGCCTAT 58.876 55.000 0.00 0.00 0.00 2.57
2229 2622 0.830648 TCCTCCAACCGAAGCCTATG 59.169 55.000 0.00 0.00 0.00 2.23
2230 2623 0.541863 CCTCCAACCGAAGCCTATGT 59.458 55.000 0.00 0.00 0.00 2.29
2231 2624 1.656652 CTCCAACCGAAGCCTATGTG 58.343 55.000 0.00 0.00 0.00 3.21
2232 2625 0.981183 TCCAACCGAAGCCTATGTGT 59.019 50.000 0.00 0.00 0.00 3.72
2233 2626 1.349688 TCCAACCGAAGCCTATGTGTT 59.650 47.619 0.00 0.00 0.00 3.32
2234 2627 2.159382 CCAACCGAAGCCTATGTGTTT 58.841 47.619 0.00 0.00 0.00 2.83
2235 2628 2.556622 CCAACCGAAGCCTATGTGTTTT 59.443 45.455 0.00 0.00 0.00 2.43
2236 2629 3.365969 CCAACCGAAGCCTATGTGTTTTC 60.366 47.826 0.00 0.00 0.00 2.29
2237 2630 2.433436 ACCGAAGCCTATGTGTTTTCC 58.567 47.619 0.00 0.00 0.00 3.13
2238 2631 2.039879 ACCGAAGCCTATGTGTTTTCCT 59.960 45.455 0.00 0.00 0.00 3.36
2239 2632 3.081804 CCGAAGCCTATGTGTTTTCCTT 58.918 45.455 0.00 0.00 0.00 3.36
2240 2633 3.506067 CCGAAGCCTATGTGTTTTCCTTT 59.494 43.478 0.00 0.00 0.00 3.11
2241 2634 4.698304 CCGAAGCCTATGTGTTTTCCTTTA 59.302 41.667 0.00 0.00 0.00 1.85
2242 2635 5.391629 CCGAAGCCTATGTGTTTTCCTTTAC 60.392 44.000 0.00 0.00 0.00 2.01
2243 2636 5.411669 CGAAGCCTATGTGTTTTCCTTTACT 59.588 40.000 0.00 0.00 0.00 2.24
2244 2637 6.402226 CGAAGCCTATGTGTTTTCCTTTACTC 60.402 42.308 0.00 0.00 0.00 2.59
2245 2638 5.876357 AGCCTATGTGTTTTCCTTTACTCA 58.124 37.500 0.00 0.00 0.00 3.41
2246 2639 6.485171 AGCCTATGTGTTTTCCTTTACTCAT 58.515 36.000 0.00 0.00 34.16 2.90
2247 2640 7.630082 AGCCTATGTGTTTTCCTTTACTCATA 58.370 34.615 0.00 0.00 32.57 2.15
2248 2641 7.553044 AGCCTATGTGTTTTCCTTTACTCATAC 59.447 37.037 0.00 0.00 32.57 2.39
2249 2642 7.335924 GCCTATGTGTTTTCCTTTACTCATACA 59.664 37.037 0.00 0.00 32.57 2.29
2250 2643 9.396022 CCTATGTGTTTTCCTTTACTCATACAT 57.604 33.333 0.00 0.00 32.57 2.29
2253 2646 8.918202 TGTGTTTTCCTTTACTCATACATCTT 57.082 30.769 0.00 0.00 0.00 2.40
2254 2647 8.783093 TGTGTTTTCCTTTACTCATACATCTTG 58.217 33.333 0.00 0.00 0.00 3.02
2255 2648 8.237267 GTGTTTTCCTTTACTCATACATCTTGG 58.763 37.037 0.00 0.00 0.00 3.61
2256 2649 7.942341 TGTTTTCCTTTACTCATACATCTTGGT 59.058 33.333 0.00 0.00 0.00 3.67
2257 2650 8.793592 GTTTTCCTTTACTCATACATCTTGGTT 58.206 33.333 0.00 0.00 0.00 3.67
2258 2651 8.934023 TTTCCTTTACTCATACATCTTGGTTT 57.066 30.769 0.00 0.00 0.00 3.27
2259 2652 8.934023 TTCCTTTACTCATACATCTTGGTTTT 57.066 30.769 0.00 0.00 0.00 2.43
2260 2653 8.335532 TCCTTTACTCATACATCTTGGTTTTG 57.664 34.615 0.00 0.00 0.00 2.44
2261 2654 7.942341 TCCTTTACTCATACATCTTGGTTTTGT 59.058 33.333 0.00 0.00 0.00 2.83
2262 2655 8.576442 CCTTTACTCATACATCTTGGTTTTGTT 58.424 33.333 0.00 0.00 0.00 2.83
2279 2672 9.169592 TGGTTTTGTTAATATACTTAGTGCTCC 57.830 33.333 0.00 0.00 0.00 4.70
2280 2673 9.169592 GGTTTTGTTAATATACTTAGTGCTCCA 57.830 33.333 0.00 0.00 0.00 3.86
2284 2677 9.817809 TTGTTAATATACTTAGTGCTCCAGAAG 57.182 33.333 0.00 0.00 0.00 2.85
2285 2678 9.197306 TGTTAATATACTTAGTGCTCCAGAAGA 57.803 33.333 0.00 0.00 0.00 2.87
2286 2679 9.465985 GTTAATATACTTAGTGCTCCAGAAGAC 57.534 37.037 0.00 0.00 0.00 3.01
2287 2680 7.661536 AATATACTTAGTGCTCCAGAAGACA 57.338 36.000 0.00 0.00 0.00 3.41
2288 2681 7.847711 ATATACTTAGTGCTCCAGAAGACAT 57.152 36.000 0.00 0.00 0.00 3.06
2289 2682 8.941995 ATATACTTAGTGCTCCAGAAGACATA 57.058 34.615 0.00 0.00 0.00 2.29
2290 2683 5.590530 ACTTAGTGCTCCAGAAGACATAG 57.409 43.478 0.00 0.00 0.00 2.23
2291 2684 5.020132 ACTTAGTGCTCCAGAAGACATAGT 58.980 41.667 0.00 0.00 0.00 2.12
2292 2685 5.482175 ACTTAGTGCTCCAGAAGACATAGTT 59.518 40.000 0.00 0.00 0.00 2.24
2293 2686 4.899352 AGTGCTCCAGAAGACATAGTTT 57.101 40.909 0.00 0.00 0.00 2.66
2294 2687 4.826556 AGTGCTCCAGAAGACATAGTTTC 58.173 43.478 0.00 0.00 0.00 2.78
2295 2688 3.935828 GTGCTCCAGAAGACATAGTTTCC 59.064 47.826 0.00 0.00 0.00 3.13
2296 2689 3.840666 TGCTCCAGAAGACATAGTTTCCT 59.159 43.478 0.00 0.00 0.00 3.36
2297 2690 4.287067 TGCTCCAGAAGACATAGTTTCCTT 59.713 41.667 0.00 0.00 0.00 3.36
2298 2691 5.483937 TGCTCCAGAAGACATAGTTTCCTTA 59.516 40.000 0.00 0.00 0.00 2.69
2299 2692 5.813157 GCTCCAGAAGACATAGTTTCCTTAC 59.187 44.000 0.00 0.00 0.00 2.34
2300 2693 6.574465 GCTCCAGAAGACATAGTTTCCTTACA 60.574 42.308 0.00 0.00 0.00 2.41
2301 2694 6.936279 TCCAGAAGACATAGTTTCCTTACAG 58.064 40.000 0.00 0.00 0.00 2.74
2302 2695 6.497259 TCCAGAAGACATAGTTTCCTTACAGT 59.503 38.462 0.00 0.00 0.00 3.55
2303 2696 7.672660 TCCAGAAGACATAGTTTCCTTACAGTA 59.327 37.037 0.00 0.00 0.00 2.74
2304 2697 7.760340 CCAGAAGACATAGTTTCCTTACAGTAC 59.240 40.741 0.00 0.00 0.00 2.73
2305 2698 8.524487 CAGAAGACATAGTTTCCTTACAGTACT 58.476 37.037 0.00 0.00 0.00 2.73
2306 2699 8.741841 AGAAGACATAGTTTCCTTACAGTACTC 58.258 37.037 0.00 0.00 0.00 2.59
2307 2700 8.653036 AAGACATAGTTTCCTTACAGTACTCT 57.347 34.615 0.00 0.00 0.00 3.24
2308 2701 9.750783 AAGACATAGTTTCCTTACAGTACTCTA 57.249 33.333 0.00 0.00 0.00 2.43
2309 2702 9.176460 AGACATAGTTTCCTTACAGTACTCTAC 57.824 37.037 0.00 0.00 0.00 2.59
2310 2703 9.176460 GACATAGTTTCCTTACAGTACTCTACT 57.824 37.037 0.00 0.00 40.28 2.57
2311 2704 9.176460 ACATAGTTTCCTTACAGTACTCTACTC 57.824 37.037 0.00 0.00 36.76 2.59
2312 2705 6.740411 AGTTTCCTTACAGTACTCTACTCG 57.260 41.667 0.00 0.00 36.76 4.18
2313 2706 6.237154 AGTTTCCTTACAGTACTCTACTCGT 58.763 40.000 0.00 0.00 36.76 4.18
2314 2707 6.149142 AGTTTCCTTACAGTACTCTACTCGTG 59.851 42.308 0.00 0.00 36.76 4.35
2315 2708 5.411831 TCCTTACAGTACTCTACTCGTGA 57.588 43.478 0.00 0.00 36.76 4.35
2316 2709 5.798132 TCCTTACAGTACTCTACTCGTGAA 58.202 41.667 0.00 0.00 36.76 3.18
2317 2710 6.233434 TCCTTACAGTACTCTACTCGTGAAA 58.767 40.000 0.00 0.00 36.76 2.69
2318 2711 6.883217 TCCTTACAGTACTCTACTCGTGAAAT 59.117 38.462 0.00 0.00 36.76 2.17
2319 2712 6.967767 CCTTACAGTACTCTACTCGTGAAATG 59.032 42.308 0.00 0.00 36.76 2.32
2320 2713 7.148289 CCTTACAGTACTCTACTCGTGAAATGA 60.148 40.741 0.00 0.00 36.76 2.57
2321 2714 6.570672 ACAGTACTCTACTCGTGAAATGAA 57.429 37.500 0.00 0.00 36.76 2.57
2322 2715 6.978338 ACAGTACTCTACTCGTGAAATGAAA 58.022 36.000 0.00 0.00 36.76 2.69
2323 2716 7.603651 ACAGTACTCTACTCGTGAAATGAAAT 58.396 34.615 0.00 0.00 36.76 2.17
2324 2717 7.542477 ACAGTACTCTACTCGTGAAATGAAATG 59.458 37.037 0.00 0.00 36.76 2.32
2325 2718 5.786401 ACTCTACTCGTGAAATGAAATGC 57.214 39.130 0.00 0.00 0.00 3.56
2326 2719 5.237815 ACTCTACTCGTGAAATGAAATGCA 58.762 37.500 0.00 0.00 0.00 3.96
2327 2720 5.349817 ACTCTACTCGTGAAATGAAATGCAG 59.650 40.000 0.00 0.00 0.00 4.41
2328 2721 3.837213 ACTCGTGAAATGAAATGCAGG 57.163 42.857 0.00 0.00 0.00 4.85
2329 2722 3.411446 ACTCGTGAAATGAAATGCAGGA 58.589 40.909 0.00 0.00 0.00 3.86
2330 2723 4.012374 ACTCGTGAAATGAAATGCAGGAT 58.988 39.130 0.00 0.00 29.92 3.24
2331 2724 4.095483 ACTCGTGAAATGAAATGCAGGATC 59.905 41.667 0.00 0.00 29.92 3.36
2332 2725 4.264253 TCGTGAAATGAAATGCAGGATCT 58.736 39.130 0.00 0.00 0.00 2.75
2333 2726 4.701651 TCGTGAAATGAAATGCAGGATCTT 59.298 37.500 0.00 0.00 0.00 2.40
2334 2727 5.183713 TCGTGAAATGAAATGCAGGATCTTT 59.816 36.000 0.00 0.00 0.00 2.52
2335 2728 5.287752 CGTGAAATGAAATGCAGGATCTTTG 59.712 40.000 0.00 0.00 0.00 2.77
2336 2729 6.392354 GTGAAATGAAATGCAGGATCTTTGA 58.608 36.000 0.00 0.00 0.00 2.69
2337 2730 7.039882 GTGAAATGAAATGCAGGATCTTTGAT 58.960 34.615 0.00 0.00 0.00 2.57
2338 2731 7.548075 GTGAAATGAAATGCAGGATCTTTGATT 59.452 33.333 0.00 0.00 0.00 2.57
2339 2732 7.762615 TGAAATGAAATGCAGGATCTTTGATTC 59.237 33.333 0.00 0.05 0.00 2.52
2340 2733 5.587388 TGAAATGCAGGATCTTTGATTCC 57.413 39.130 0.00 0.00 0.00 3.01
2341 2734 4.096833 TGAAATGCAGGATCTTTGATTCCG 59.903 41.667 0.00 0.00 37.10 4.30
2342 2735 2.042686 TGCAGGATCTTTGATTCCGG 57.957 50.000 0.00 0.00 37.10 5.14
2343 2736 0.665298 GCAGGATCTTTGATTCCGGC 59.335 55.000 0.00 0.00 44.03 6.13
2344 2737 2.042686 CAGGATCTTTGATTCCGGCA 57.957 50.000 0.00 0.00 37.10 5.69
2345 2738 2.368439 CAGGATCTTTGATTCCGGCAA 58.632 47.619 0.00 0.00 37.10 4.52
2346 2739 2.754552 CAGGATCTTTGATTCCGGCAAA 59.245 45.455 0.00 0.38 37.10 3.68
2347 2740 2.755103 AGGATCTTTGATTCCGGCAAAC 59.245 45.455 0.00 0.00 37.10 2.93
2348 2741 2.491693 GGATCTTTGATTCCGGCAAACA 59.508 45.455 0.00 0.00 32.35 2.83
2349 2742 3.501950 GATCTTTGATTCCGGCAAACAC 58.498 45.455 0.00 0.00 32.35 3.32
2350 2743 2.582052 TCTTTGATTCCGGCAAACACT 58.418 42.857 0.00 0.00 32.35 3.55
2351 2744 2.293122 TCTTTGATTCCGGCAAACACTG 59.707 45.455 0.00 0.00 32.35 3.66
2352 2745 1.974265 TTGATTCCGGCAAACACTGA 58.026 45.000 0.00 0.00 0.00 3.41
2353 2746 2.198827 TGATTCCGGCAAACACTGAT 57.801 45.000 0.00 0.00 0.00 2.90
2354 2747 2.513753 TGATTCCGGCAAACACTGATT 58.486 42.857 0.00 0.00 0.00 2.57
2355 2748 2.890311 TGATTCCGGCAAACACTGATTT 59.110 40.909 0.00 0.00 0.00 2.17
2356 2749 3.320541 TGATTCCGGCAAACACTGATTTT 59.679 39.130 0.00 0.00 0.00 1.82
2357 2750 2.791383 TCCGGCAAACACTGATTTTG 57.209 45.000 0.00 0.00 37.07 2.44
2358 2751 1.339610 TCCGGCAAACACTGATTTTGG 59.660 47.619 0.00 0.00 34.97 3.28
2360 2753 1.139163 GGCAAACACTGATTTTGGCG 58.861 50.000 13.31 0.00 45.88 5.69
2361 2754 1.269517 GGCAAACACTGATTTTGGCGA 60.270 47.619 13.31 0.00 45.88 5.54
2362 2755 2.610232 GGCAAACACTGATTTTGGCGAT 60.610 45.455 13.31 0.00 45.88 4.58
2363 2756 3.059166 GCAAACACTGATTTTGGCGATT 58.941 40.909 0.00 0.00 34.97 3.34
2364 2757 3.121778 GCAAACACTGATTTTGGCGATTC 59.878 43.478 0.00 0.00 34.97 2.52
2365 2758 4.297510 CAAACACTGATTTTGGCGATTCA 58.702 39.130 0.00 0.00 31.44 2.57
2366 2759 4.582701 AACACTGATTTTGGCGATTCAA 57.417 36.364 0.00 0.00 0.00 2.69
2367 2760 4.789012 ACACTGATTTTGGCGATTCAAT 57.211 36.364 0.00 0.00 0.00 2.57
2368 2761 4.487948 ACACTGATTTTGGCGATTCAATG 58.512 39.130 0.00 0.00 0.00 2.82
2369 2762 4.218200 ACACTGATTTTGGCGATTCAATGA 59.782 37.500 4.31 0.00 0.00 2.57
2370 2763 5.105635 ACACTGATTTTGGCGATTCAATGAT 60.106 36.000 4.31 0.00 0.00 2.45
2371 2764 5.808540 CACTGATTTTGGCGATTCAATGATT 59.191 36.000 0.00 0.00 0.00 2.57
2372 2765 6.020121 CACTGATTTTGGCGATTCAATGATTC 60.020 38.462 0.00 0.00 0.00 2.52
2373 2766 5.350633 TGATTTTGGCGATTCAATGATTCC 58.649 37.500 0.22 0.00 0.00 3.01
2374 2767 4.797800 TTTTGGCGATTCAATGATTCCA 57.202 36.364 0.22 0.00 0.00 3.53
2375 2768 4.797800 TTTGGCGATTCAATGATTCCAA 57.202 36.364 0.22 1.88 0.00 3.53
2376 2769 4.374843 TTGGCGATTCAATGATTCCAAG 57.625 40.909 0.22 0.00 0.00 3.61
2377 2770 2.099592 TGGCGATTCAATGATTCCAAGC 59.900 45.455 0.22 0.00 0.00 4.01
2378 2771 2.099592 GGCGATTCAATGATTCCAAGCA 59.900 45.455 0.22 0.00 0.00 3.91
2379 2772 3.111098 GCGATTCAATGATTCCAAGCAC 58.889 45.455 0.22 0.00 0.00 4.40
2380 2773 3.181493 GCGATTCAATGATTCCAAGCACT 60.181 43.478 0.22 0.00 0.00 4.40
2381 2774 4.035558 GCGATTCAATGATTCCAAGCACTA 59.964 41.667 0.22 0.00 0.00 2.74
2382 2775 5.745514 CGATTCAATGATTCCAAGCACTAG 58.254 41.667 0.22 0.00 0.00 2.57
2383 2776 5.295292 CGATTCAATGATTCCAAGCACTAGT 59.705 40.000 0.00 0.00 0.00 2.57
2384 2777 5.885230 TTCAATGATTCCAAGCACTAGTG 57.115 39.130 18.93 18.93 0.00 2.74
2385 2778 5.164620 TCAATGATTCCAAGCACTAGTGA 57.835 39.130 27.08 4.49 0.00 3.41
2386 2779 5.181009 TCAATGATTCCAAGCACTAGTGAG 58.819 41.667 27.08 14.26 0.00 3.51
2387 2780 5.046376 TCAATGATTCCAAGCACTAGTGAGA 60.046 40.000 27.08 13.26 0.00 3.27
2388 2781 5.627182 ATGATTCCAAGCACTAGTGAGAT 57.373 39.130 27.08 8.41 0.00 2.75
2389 2782 5.016051 TGATTCCAAGCACTAGTGAGATC 57.984 43.478 27.08 16.84 0.00 2.75
2390 2783 4.467438 TGATTCCAAGCACTAGTGAGATCA 59.533 41.667 27.08 18.81 0.00 2.92
2391 2784 4.890158 TTCCAAGCACTAGTGAGATCAA 57.110 40.909 27.08 9.64 0.00 2.57
2392 2785 4.890158 TCCAAGCACTAGTGAGATCAAA 57.110 40.909 27.08 2.12 0.00 2.69
2393 2786 5.227569 TCCAAGCACTAGTGAGATCAAAA 57.772 39.130 27.08 0.63 0.00 2.44
2394 2787 4.997395 TCCAAGCACTAGTGAGATCAAAAC 59.003 41.667 27.08 5.18 0.00 2.43
2395 2788 4.154918 CCAAGCACTAGTGAGATCAAAACC 59.845 45.833 27.08 4.44 0.00 3.27
2396 2789 4.623932 AGCACTAGTGAGATCAAAACCA 57.376 40.909 27.08 0.00 0.00 3.67
2397 2790 4.973168 AGCACTAGTGAGATCAAAACCAA 58.027 39.130 27.08 0.00 0.00 3.67
2398 2791 4.999950 AGCACTAGTGAGATCAAAACCAAG 59.000 41.667 27.08 0.00 0.00 3.61
2399 2792 4.378874 GCACTAGTGAGATCAAAACCAAGC 60.379 45.833 27.08 0.82 0.00 4.01
2400 2793 4.154918 CACTAGTGAGATCAAAACCAAGCC 59.845 45.833 18.45 0.00 0.00 4.35
2401 2794 2.154462 AGTGAGATCAAAACCAAGCCG 58.846 47.619 0.00 0.00 0.00 5.52
2402 2795 1.200020 GTGAGATCAAAACCAAGCCGG 59.800 52.381 0.00 0.00 42.50 6.13
2403 2796 1.073125 TGAGATCAAAACCAAGCCGGA 59.927 47.619 5.05 0.00 38.63 5.14
2404 2797 2.290896 TGAGATCAAAACCAAGCCGGAT 60.291 45.455 5.05 0.00 38.63 4.18
2405 2798 2.094675 AGATCAAAACCAAGCCGGATG 58.905 47.619 5.05 2.46 38.63 3.51
2406 2799 1.134946 GATCAAAACCAAGCCGGATGG 59.865 52.381 21.48 21.48 43.84 3.51
2416 2809 2.758327 CCGGATGGTCGGGAGTGA 60.758 66.667 0.00 0.00 45.78 3.41
2417 2810 2.494918 CGGATGGTCGGGAGTGAC 59.505 66.667 0.00 0.00 38.17 3.67
2423 2816 4.098847 GTCGGGAGTGACCTGTCT 57.901 61.111 0.00 0.00 44.89 3.41
2424 2817 3.261250 GTCGGGAGTGACCTGTCTA 57.739 57.895 0.00 0.00 44.89 2.59
2425 2818 1.765230 GTCGGGAGTGACCTGTCTAT 58.235 55.000 0.00 0.00 44.89 1.98
2426 2819 2.928334 GTCGGGAGTGACCTGTCTATA 58.072 52.381 0.00 0.00 44.89 1.31
2427 2820 3.285484 GTCGGGAGTGACCTGTCTATAA 58.715 50.000 0.00 0.00 44.89 0.98
2428 2821 3.315749 GTCGGGAGTGACCTGTCTATAAG 59.684 52.174 0.00 0.00 44.89 1.73
2429 2822 2.623889 CGGGAGTGACCTGTCTATAAGG 59.376 54.545 0.00 0.00 40.03 2.69
2460 2853 7.416964 AAGTGACTCATATATGCTCTATCCC 57.583 40.000 7.92 0.00 0.00 3.85
2461 2854 6.497640 AGTGACTCATATATGCTCTATCCCA 58.502 40.000 7.92 0.00 0.00 4.37
2462 2855 7.131451 AGTGACTCATATATGCTCTATCCCAT 58.869 38.462 7.92 0.00 0.00 4.00
2463 2856 7.287466 AGTGACTCATATATGCTCTATCCCATC 59.713 40.741 7.92 0.00 0.00 3.51
2464 2857 7.287466 GTGACTCATATATGCTCTATCCCATCT 59.713 40.741 7.92 0.00 0.00 2.90
2465 2858 7.287235 TGACTCATATATGCTCTATCCCATCTG 59.713 40.741 7.92 0.00 0.00 2.90
2466 2859 7.360643 ACTCATATATGCTCTATCCCATCTGA 58.639 38.462 7.92 0.00 0.00 3.27
2467 2860 8.011883 ACTCATATATGCTCTATCCCATCTGAT 58.988 37.037 7.92 0.00 0.00 2.90
2468 2861 8.419922 TCATATATGCTCTATCCCATCTGATC 57.580 38.462 7.92 0.00 0.00 2.92
2469 2862 8.008922 TCATATATGCTCTATCCCATCTGATCA 58.991 37.037 7.92 0.00 0.00 2.92
2470 2863 8.817876 CATATATGCTCTATCCCATCTGATCAT 58.182 37.037 0.00 0.00 0.00 2.45
2471 2864 7.693533 ATATGCTCTATCCCATCTGATCATT 57.306 36.000 0.00 0.00 0.00 2.57
2472 2865 5.837770 TGCTCTATCCCATCTGATCATTT 57.162 39.130 0.00 0.00 0.00 2.32
2473 2866 5.802465 TGCTCTATCCCATCTGATCATTTC 58.198 41.667 0.00 0.00 0.00 2.17
2474 2867 5.184711 GCTCTATCCCATCTGATCATTTCC 58.815 45.833 0.00 0.00 0.00 3.13
2475 2868 5.743117 CTCTATCCCATCTGATCATTTCCC 58.257 45.833 0.00 0.00 0.00 3.97
2476 2869 5.418654 TCTATCCCATCTGATCATTTCCCT 58.581 41.667 0.00 0.00 0.00 4.20
2477 2870 3.870538 TCCCATCTGATCATTTCCCTG 57.129 47.619 0.00 0.00 0.00 4.45
2478 2871 3.125656 TCCCATCTGATCATTTCCCTGT 58.874 45.455 0.00 0.00 0.00 4.00
2479 2872 3.528905 TCCCATCTGATCATTTCCCTGTT 59.471 43.478 0.00 0.00 0.00 3.16
2480 2873 4.017222 TCCCATCTGATCATTTCCCTGTTT 60.017 41.667 0.00 0.00 0.00 2.83
2481 2874 4.098960 CCCATCTGATCATTTCCCTGTTTG 59.901 45.833 0.00 0.00 0.00 2.93
2482 2875 4.098960 CCATCTGATCATTTCCCTGTTTGG 59.901 45.833 0.00 0.00 0.00 3.28
2493 2886 0.948678 CCTGTTTGGGTACAACGTGG 59.051 55.000 0.00 0.00 36.06 4.94
2494 2887 0.948678 CTGTTTGGGTACAACGTGGG 59.051 55.000 0.00 0.00 36.06 4.61
2495 2888 0.545171 TGTTTGGGTACAACGTGGGA 59.455 50.000 0.00 0.00 36.06 4.37
2496 2889 1.232119 GTTTGGGTACAACGTGGGAG 58.768 55.000 0.00 0.00 36.06 4.30
2497 2890 0.108963 TTTGGGTACAACGTGGGAGG 59.891 55.000 0.00 0.00 36.06 4.30
2498 2891 0.763604 TTGGGTACAACGTGGGAGGA 60.764 55.000 0.00 0.00 0.00 3.71
2499 2892 1.189524 TGGGTACAACGTGGGAGGAG 61.190 60.000 0.00 0.00 0.00 3.69
2500 2893 1.595357 GGTACAACGTGGGAGGAGG 59.405 63.158 0.00 0.00 0.00 4.30
2501 2894 0.901580 GGTACAACGTGGGAGGAGGA 60.902 60.000 0.00 0.00 0.00 3.71
2502 2895 0.531200 GTACAACGTGGGAGGAGGAG 59.469 60.000 0.00 0.00 0.00 3.69
2503 2896 0.113776 TACAACGTGGGAGGAGGAGT 59.886 55.000 0.00 0.00 0.00 3.85
2504 2897 0.113776 ACAACGTGGGAGGAGGAGTA 59.886 55.000 0.00 0.00 0.00 2.59
2505 2898 1.273098 ACAACGTGGGAGGAGGAGTAT 60.273 52.381 0.00 0.00 0.00 2.12
2506 2899 1.831736 CAACGTGGGAGGAGGAGTATT 59.168 52.381 0.00 0.00 0.00 1.89
2507 2900 2.236395 CAACGTGGGAGGAGGAGTATTT 59.764 50.000 0.00 0.00 0.00 1.40
2508 2901 3.393426 ACGTGGGAGGAGGAGTATTTA 57.607 47.619 0.00 0.00 0.00 1.40
2509 2902 3.716431 ACGTGGGAGGAGGAGTATTTAA 58.284 45.455 0.00 0.00 0.00 1.52
2510 2903 3.450096 ACGTGGGAGGAGGAGTATTTAAC 59.550 47.826 0.00 0.00 0.00 2.01
2511 2904 3.449737 CGTGGGAGGAGGAGTATTTAACA 59.550 47.826 0.00 0.00 0.00 2.41
2512 2905 4.081309 CGTGGGAGGAGGAGTATTTAACAA 60.081 45.833 0.00 0.00 0.00 2.83
2513 2906 5.570034 CGTGGGAGGAGGAGTATTTAACAAA 60.570 44.000 0.00 0.00 0.00 2.83
2514 2907 6.243148 GTGGGAGGAGGAGTATTTAACAAAA 58.757 40.000 0.00 0.00 0.00 2.44
2515 2908 6.717997 GTGGGAGGAGGAGTATTTAACAAAAA 59.282 38.462 0.00 0.00 0.00 1.94
2533 2926 3.974871 AAAAACTACCACATTTCGCGT 57.025 38.095 5.77 0.00 0.00 6.01
2535 2928 5.421212 AAAAACTACCACATTTCGCGTAA 57.579 34.783 5.77 2.31 0.00 3.18
2536 2929 4.394099 AAACTACCACATTTCGCGTAAC 57.606 40.909 5.77 0.00 0.00 2.50
2537 2930 2.340337 ACTACCACATTTCGCGTAACC 58.660 47.619 5.77 0.00 0.00 2.85
2538 2931 2.288948 ACTACCACATTTCGCGTAACCA 60.289 45.455 5.77 0.00 0.00 3.67
2539 2932 1.816074 ACCACATTTCGCGTAACCAT 58.184 45.000 5.77 0.00 0.00 3.55
2540 2933 1.466950 ACCACATTTCGCGTAACCATG 59.533 47.619 5.77 0.52 0.00 3.66
2541 2934 1.534028 CACATTTCGCGTAACCATGC 58.466 50.000 5.77 0.00 0.00 4.06
2542 2935 0.450184 ACATTTCGCGTAACCATGCC 59.550 50.000 5.77 0.00 32.68 4.40
2543 2936 0.732571 CATTTCGCGTAACCATGCCT 59.267 50.000 5.77 0.00 32.68 4.75
2544 2937 1.937223 CATTTCGCGTAACCATGCCTA 59.063 47.619 5.77 0.00 32.68 3.93
2545 2938 1.361793 TTTCGCGTAACCATGCCTAC 58.638 50.000 5.77 0.00 32.68 3.18
2546 2939 0.246910 TTCGCGTAACCATGCCTACA 59.753 50.000 5.77 0.00 32.68 2.74
2547 2940 0.246910 TCGCGTAACCATGCCTACAA 59.753 50.000 5.77 0.00 32.68 2.41
2548 2941 0.650512 CGCGTAACCATGCCTACAAG 59.349 55.000 0.00 0.00 32.68 3.16
2549 2942 0.377203 GCGTAACCATGCCTACAAGC 59.623 55.000 0.00 0.00 0.00 4.01
2550 2943 2.012051 GCGTAACCATGCCTACAAGCT 61.012 52.381 0.00 0.00 0.00 3.74
2551 2944 2.740580 GCGTAACCATGCCTACAAGCTA 60.741 50.000 0.00 0.00 0.00 3.32
2552 2945 2.864343 CGTAACCATGCCTACAAGCTAC 59.136 50.000 0.00 0.00 0.00 3.58
2553 2946 2.420058 AACCATGCCTACAAGCTACC 57.580 50.000 0.00 0.00 0.00 3.18
2554 2947 1.285280 ACCATGCCTACAAGCTACCA 58.715 50.000 0.00 0.00 0.00 3.25
2555 2948 1.065418 ACCATGCCTACAAGCTACCAC 60.065 52.381 0.00 0.00 0.00 4.16
2556 2949 1.210478 CCATGCCTACAAGCTACCACT 59.790 52.381 0.00 0.00 0.00 4.00
2557 2950 2.356125 CCATGCCTACAAGCTACCACTT 60.356 50.000 0.00 0.00 0.00 3.16
2558 2951 3.347216 CATGCCTACAAGCTACCACTTT 58.653 45.455 0.00 0.00 0.00 2.66
2559 2952 2.778299 TGCCTACAAGCTACCACTTTG 58.222 47.619 0.00 0.00 0.00 2.77
2560 2953 1.468914 GCCTACAAGCTACCACTTTGC 59.531 52.381 0.00 0.00 0.00 3.68
2561 2954 2.778299 CCTACAAGCTACCACTTTGCA 58.222 47.619 0.00 0.00 0.00 4.08
2562 2955 3.146066 CCTACAAGCTACCACTTTGCAA 58.854 45.455 0.00 0.00 0.00 4.08
2563 2956 3.568007 CCTACAAGCTACCACTTTGCAAA 59.432 43.478 12.14 12.14 0.00 3.68
2564 2957 4.218417 CCTACAAGCTACCACTTTGCAAAT 59.782 41.667 13.23 0.00 0.00 2.32
2565 2958 4.670896 ACAAGCTACCACTTTGCAAATT 57.329 36.364 13.23 3.91 0.00 1.82
2566 2959 5.022282 ACAAGCTACCACTTTGCAAATTT 57.978 34.783 13.23 0.00 0.00 1.82
2567 2960 4.810491 ACAAGCTACCACTTTGCAAATTTG 59.190 37.500 13.23 14.03 0.00 2.32
2568 2961 4.670896 AGCTACCACTTTGCAAATTTGT 57.329 36.364 19.03 11.58 0.00 2.83
2569 2962 4.370917 AGCTACCACTTTGCAAATTTGTG 58.629 39.130 19.03 16.40 0.00 3.33
2570 2963 3.059665 GCTACCACTTTGCAAATTTGTGC 60.060 43.478 19.03 14.31 45.15 4.57
2571 2964 2.287769 ACCACTTTGCAAATTTGTGCC 58.712 42.857 19.03 3.88 44.26 5.01
2572 2965 1.261089 CCACTTTGCAAATTTGTGCCG 59.739 47.619 19.03 8.64 44.26 5.69
2573 2966 2.200067 CACTTTGCAAATTTGTGCCGA 58.800 42.857 19.03 0.44 44.26 5.54
2574 2967 2.606725 CACTTTGCAAATTTGTGCCGAA 59.393 40.909 19.03 8.10 44.26 4.30
2575 2968 3.063180 CACTTTGCAAATTTGTGCCGAAA 59.937 39.130 19.03 9.62 44.26 3.46
2576 2969 3.686726 ACTTTGCAAATTTGTGCCGAAAA 59.313 34.783 19.03 9.52 44.26 2.29
2577 2970 3.665173 TTGCAAATTTGTGCCGAAAAC 57.335 38.095 19.03 0.40 44.26 2.43
2578 2971 2.898705 TGCAAATTTGTGCCGAAAACT 58.101 38.095 19.03 0.00 44.26 2.66
2579 2972 4.046938 TGCAAATTTGTGCCGAAAACTA 57.953 36.364 19.03 0.00 44.26 2.24
2580 2973 3.799420 TGCAAATTTGTGCCGAAAACTAC 59.201 39.130 19.03 0.00 44.26 2.73
2581 2974 3.183574 GCAAATTTGTGCCGAAAACTACC 59.816 43.478 19.03 0.00 38.66 3.18
2582 2975 4.363999 CAAATTTGTGCCGAAAACTACCA 58.636 39.130 10.15 0.00 0.00 3.25
2583 2976 4.864704 AATTTGTGCCGAAAACTACCAT 57.135 36.364 0.00 0.00 0.00 3.55
2584 2977 4.864704 ATTTGTGCCGAAAACTACCATT 57.135 36.364 0.00 0.00 0.00 3.16
2585 2978 4.657436 TTTGTGCCGAAAACTACCATTT 57.343 36.364 0.00 0.00 0.00 2.32
2586 2979 4.657436 TTGTGCCGAAAACTACCATTTT 57.343 36.364 0.00 0.00 34.46 1.82
2587 2980 4.657436 TGTGCCGAAAACTACCATTTTT 57.343 36.364 0.00 0.00 31.90 1.94
2617 3010 7.797038 AATCTTTGACTAAAAACTACCGTGT 57.203 32.000 0.00 0.00 0.00 4.49
2618 3011 6.833342 TCTTTGACTAAAAACTACCGTGTC 57.167 37.500 0.00 0.00 0.00 3.67
2619 3012 6.576185 TCTTTGACTAAAAACTACCGTGTCT 58.424 36.000 0.00 0.00 0.00 3.41
2620 3013 6.477688 TCTTTGACTAAAAACTACCGTGTCTG 59.522 38.462 0.00 0.00 0.00 3.51
2621 3014 5.518848 TGACTAAAAACTACCGTGTCTGA 57.481 39.130 0.00 0.00 0.00 3.27
2622 3015 5.904941 TGACTAAAAACTACCGTGTCTGAA 58.095 37.500 0.00 0.00 0.00 3.02
2623 3016 6.339730 TGACTAAAAACTACCGTGTCTGAAA 58.660 36.000 0.00 0.00 0.00 2.69
2624 3017 6.817641 TGACTAAAAACTACCGTGTCTGAAAA 59.182 34.615 0.00 0.00 0.00 2.29
2625 3018 7.010738 TGACTAAAAACTACCGTGTCTGAAAAG 59.989 37.037 0.00 0.00 0.00 2.27
2626 3019 6.820152 ACTAAAAACTACCGTGTCTGAAAAGT 59.180 34.615 0.00 0.00 0.00 2.66
2627 3020 5.479716 AAAACTACCGTGTCTGAAAAGTG 57.520 39.130 0.00 0.00 0.00 3.16
2628 3021 3.107642 ACTACCGTGTCTGAAAAGTGG 57.892 47.619 0.00 0.00 0.00 4.00
2629 3022 1.798813 CTACCGTGTCTGAAAAGTGGC 59.201 52.381 0.00 0.00 0.00 5.01
2630 3023 0.180406 ACCGTGTCTGAAAAGTGGCT 59.820 50.000 0.00 0.00 0.00 4.75
2631 3024 0.588252 CCGTGTCTGAAAAGTGGCTG 59.412 55.000 0.00 0.00 0.00 4.85
2632 3025 1.581934 CGTGTCTGAAAAGTGGCTGA 58.418 50.000 0.00 0.00 0.00 4.26
2633 3026 2.146342 CGTGTCTGAAAAGTGGCTGAT 58.854 47.619 0.00 0.00 0.00 2.90
2634 3027 2.549754 CGTGTCTGAAAAGTGGCTGATT 59.450 45.455 0.00 0.00 0.00 2.57
2635 3028 3.364366 CGTGTCTGAAAAGTGGCTGATTC 60.364 47.826 0.00 0.00 0.00 2.52
2636 3029 2.807967 TGTCTGAAAAGTGGCTGATTCG 59.192 45.455 0.00 0.00 0.00 3.34
2637 3030 2.160417 GTCTGAAAAGTGGCTGATTCGG 59.840 50.000 0.00 0.00 0.00 4.30
2638 3031 0.881118 TGAAAAGTGGCTGATTCGGC 59.119 50.000 9.07 9.07 34.56 5.54
2639 3032 1.168714 GAAAAGTGGCTGATTCGGCT 58.831 50.000 16.73 0.00 35.82 5.52
2640 3033 2.290008 TGAAAAGTGGCTGATTCGGCTA 60.290 45.455 16.73 8.48 35.82 3.93
2641 3034 2.029838 AAAGTGGCTGATTCGGCTAG 57.970 50.000 16.73 0.00 35.82 3.42
2642 3035 0.905357 AAGTGGCTGATTCGGCTAGT 59.095 50.000 16.73 11.13 35.82 2.57
2643 3036 0.461961 AGTGGCTGATTCGGCTAGTC 59.538 55.000 16.73 0.74 35.82 2.59
2644 3037 0.461961 GTGGCTGATTCGGCTAGTCT 59.538 55.000 16.73 0.00 35.82 3.24
2645 3038 1.681793 GTGGCTGATTCGGCTAGTCTA 59.318 52.381 16.73 0.00 35.82 2.59
2646 3039 2.100916 GTGGCTGATTCGGCTAGTCTAA 59.899 50.000 16.73 0.00 35.82 2.10
2647 3040 2.764010 TGGCTGATTCGGCTAGTCTAAA 59.236 45.455 16.73 0.00 35.82 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
750 785 6.447084 AGAAATCCCATCCTAGTACCTTTTCA 59.553 38.462 0.00 0.00 0.00 2.69
1401 1446 0.104120 CGACATAGTTCCCGCCATCA 59.896 55.000 0.00 0.00 0.00 3.07
1407 1452 2.960129 GCGCCGACATAGTTCCCG 60.960 66.667 0.00 0.00 0.00 5.14
1425 1470 1.882352 GCACCCAACACGAGATTCCTT 60.882 52.381 0.00 0.00 0.00 3.36
1472 1517 1.271871 TGTTGATCCCCTTGAACGCAT 60.272 47.619 0.00 0.00 0.00 4.73
1491 1536 0.107831 TTGTCACCGGGGACTTCTTG 59.892 55.000 35.49 8.32 38.61 3.02
1503 1548 6.595326 TCATCTGTTGATCTATGTTTGTCACC 59.405 38.462 0.00 0.00 0.00 4.02
1535 1580 3.049674 CACCTGCGACGCCACAAT 61.050 61.111 18.69 0.00 0.00 2.71
1536 1581 3.741830 TTCACCTGCGACGCCACAA 62.742 57.895 18.69 0.00 0.00 3.33
1548 1593 1.707427 AGAAGGCCAATGAGTTCACCT 59.293 47.619 5.01 0.00 0.00 4.00
1594 1639 7.821846 GGGGATTGTACATATGAGAAGAGATTC 59.178 40.741 10.38 0.00 0.00 2.52
1602 1649 3.576982 GACGGGGGATTGTACATATGAGA 59.423 47.826 10.38 0.00 0.00 3.27
1612 1659 3.943671 TCATTATTGACGGGGGATTGT 57.056 42.857 0.00 0.00 0.00 2.71
1618 1665 3.213506 TGCTCATTCATTATTGACGGGG 58.786 45.455 0.00 0.00 0.00 5.73
1631 1678 3.465742 TGCTAGATGACCTGCTCATTC 57.534 47.619 0.00 0.00 39.96 2.67
1635 1682 2.680312 TGTTGCTAGATGACCTGCTC 57.320 50.000 0.00 0.00 0.00 4.26
1636 1683 4.970860 ATATGTTGCTAGATGACCTGCT 57.029 40.909 0.00 0.00 0.00 4.24
1659 1706 0.478072 ACAACTGCATCCAGGACCAA 59.522 50.000 0.00 0.00 43.53 3.67
1665 1712 3.181507 CCGTAATTCACAACTGCATCCAG 60.182 47.826 0.00 0.00 44.80 3.86
1672 1719 5.178623 TGTTAAGCTCCGTAATTCACAACTG 59.821 40.000 0.00 0.00 0.00 3.16
1673 1720 5.302360 TGTTAAGCTCCGTAATTCACAACT 58.698 37.500 0.00 0.00 0.00 3.16
1674 1721 5.600908 TGTTAAGCTCCGTAATTCACAAC 57.399 39.130 0.00 0.00 0.00 3.32
1675 1722 5.527951 TGTTGTTAAGCTCCGTAATTCACAA 59.472 36.000 0.00 0.00 0.00 3.33
1702 1749 6.262496 GCCTAGTTGGTAAGACTGTTCTTTTT 59.738 38.462 0.00 0.00 37.13 1.94
1707 1754 4.267349 TGCCTAGTTGGTAAGACTGTTC 57.733 45.455 0.00 0.00 38.35 3.18
1728 1775 1.549170 CGGCACTAGAGTACCCAAGTT 59.451 52.381 0.00 0.00 0.00 2.66
1762 1809 3.284323 TGTCGAAATAGGAGCTATCGC 57.716 47.619 0.00 0.00 0.00 4.58
1772 1819 6.644181 AGATCAGTGCACATATGTCGAAATAG 59.356 38.462 21.04 0.00 0.00 1.73
1774 1821 5.363101 AGATCAGTGCACATATGTCGAAAT 58.637 37.500 21.04 0.00 0.00 2.17
1800 2190 5.212194 CGAGACTAAATTGTTGGTTTGGTG 58.788 41.667 0.00 0.00 31.59 4.17
1801 2191 4.277423 CCGAGACTAAATTGTTGGTTTGGT 59.723 41.667 0.00 0.00 33.70 3.67
1803 2193 5.008217 TGACCGAGACTAAATTGTTGGTTTG 59.992 40.000 0.00 0.00 0.00 2.93
1804 2194 5.008316 GTGACCGAGACTAAATTGTTGGTTT 59.992 40.000 0.00 0.00 0.00 3.27
1851 2243 0.331954 GGGAGGGGGTCCTTTTCTTC 59.668 60.000 0.00 0.00 46.06 2.87
1854 2246 1.786407 AACGGGAGGGGGTCCTTTTC 61.786 60.000 0.00 0.00 46.06 2.29
1862 2254 0.106149 CGAGATTAAACGGGAGGGGG 59.894 60.000 0.00 0.00 0.00 5.40
1874 2266 1.472552 CCGTGTGGGATTGCGAGATTA 60.473 52.381 0.00 0.00 38.47 1.75
1900 2292 3.278668 TTGGTTGTTACGAGGGAACAA 57.721 42.857 2.12 2.12 42.88 2.83
1943 2336 2.429610 GGCCTGAGTATACGACCTTTGA 59.570 50.000 0.00 0.00 0.00 2.69
1952 2345 3.887621 TTGTGACTGGCCTGAGTATAC 57.112 47.619 17.64 9.45 0.00 1.47
1959 2352 2.227388 GTCTCATTTTGTGACTGGCCTG 59.773 50.000 8.29 8.29 37.75 4.85
2015 2408 9.660180 AACTTAAAAAGAATGCACCTGTAAAAA 57.340 25.926 0.00 0.00 0.00 1.94
2067 2460 8.924303 GGGCCATTGACTACATGTATATATCTA 58.076 37.037 4.39 0.42 0.00 1.98
2068 2461 7.625280 AGGGCCATTGACTACATGTATATATCT 59.375 37.037 6.18 0.00 0.00 1.98
2069 2462 7.796054 AGGGCCATTGACTACATGTATATATC 58.204 38.462 6.18 3.20 0.00 1.63
2070 2463 7.147479 GGAGGGCCATTGACTACATGTATATAT 60.147 40.741 6.18 0.00 0.00 0.86
2071 2464 6.156256 GGAGGGCCATTGACTACATGTATATA 59.844 42.308 6.18 0.00 0.00 0.86
2088 2481 2.280308 AATAGTTACCTGGAGGGCCA 57.720 50.000 6.18 0.00 43.47 5.36
2164 2557 1.203758 CCCCGGCGCTTTAGAATTTTT 59.796 47.619 7.64 0.00 0.00 1.94
2165 2558 0.815095 CCCCGGCGCTTTAGAATTTT 59.185 50.000 7.64 0.00 0.00 1.82
2166 2559 1.035385 CCCCCGGCGCTTTAGAATTT 61.035 55.000 7.64 0.00 0.00 1.82
2167 2560 1.453197 CCCCCGGCGCTTTAGAATT 60.453 57.895 7.64 0.00 0.00 2.17
2168 2561 2.192175 CCCCCGGCGCTTTAGAAT 59.808 61.111 7.64 0.00 0.00 2.40
2169 2562 4.789123 GCCCCCGGCGCTTTAGAA 62.789 66.667 7.64 0.00 39.62 2.10
2181 2574 2.556608 TAGTTACCTGGAGGGCCCCC 62.557 65.000 21.43 20.35 40.27 5.40
2182 2575 1.003835 TAGTTACCTGGAGGGCCCC 59.996 63.158 21.43 10.33 40.27 5.80
2183 2576 1.697082 GCTAGTTACCTGGAGGGCCC 61.697 65.000 16.46 16.46 40.27 5.80
2184 2577 1.697082 GGCTAGTTACCTGGAGGGCC 61.697 65.000 0.00 0.00 40.27 5.80
2185 2578 1.697082 GGGCTAGTTACCTGGAGGGC 61.697 65.000 0.00 0.00 40.27 5.19
2186 2579 0.031010 AGGGCTAGTTACCTGGAGGG 60.031 60.000 0.00 0.00 40.27 4.30
2187 2580 1.062810 AGAGGGCTAGTTACCTGGAGG 60.063 57.143 0.00 0.00 37.18 4.30
2188 2581 2.035632 CAGAGGGCTAGTTACCTGGAG 58.964 57.143 0.00 0.00 37.18 3.86
2189 2582 1.965318 GCAGAGGGCTAGTTACCTGGA 60.965 57.143 0.00 0.00 37.18 3.86
2190 2583 0.466124 GCAGAGGGCTAGTTACCTGG 59.534 60.000 7.39 0.00 37.18 4.45
2201 2594 2.270527 GTTGGAGGAGCAGAGGGC 59.729 66.667 0.00 0.00 45.30 5.19
2202 2595 2.993853 GGTTGGAGGAGCAGAGGG 59.006 66.667 0.00 0.00 0.00 4.30
2203 2596 1.544825 TTCGGTTGGAGGAGCAGAGG 61.545 60.000 0.00 0.00 0.00 3.69
2204 2597 0.108424 CTTCGGTTGGAGGAGCAGAG 60.108 60.000 0.00 0.00 0.00 3.35
2205 2598 1.975327 CTTCGGTTGGAGGAGCAGA 59.025 57.895 0.00 0.00 0.00 4.26
2206 2599 1.743252 GCTTCGGTTGGAGGAGCAG 60.743 63.158 0.00 0.00 0.00 4.24
2207 2600 2.347490 GCTTCGGTTGGAGGAGCA 59.653 61.111 0.00 0.00 0.00 4.26
2208 2601 1.614241 TAGGCTTCGGTTGGAGGAGC 61.614 60.000 0.00 0.00 0.00 4.70
2209 2602 1.123928 ATAGGCTTCGGTTGGAGGAG 58.876 55.000 0.00 0.00 0.00 3.69
2210 2603 0.830648 CATAGGCTTCGGTTGGAGGA 59.169 55.000 0.00 0.00 0.00 3.71
2211 2604 0.541863 ACATAGGCTTCGGTTGGAGG 59.458 55.000 0.00 0.00 0.00 4.30
2212 2605 1.066143 ACACATAGGCTTCGGTTGGAG 60.066 52.381 0.00 0.00 0.00 3.86
2213 2606 0.981183 ACACATAGGCTTCGGTTGGA 59.019 50.000 0.00 0.00 0.00 3.53
2214 2607 1.821216 AACACATAGGCTTCGGTTGG 58.179 50.000 0.00 0.00 0.00 3.77
2215 2608 3.365969 GGAAAACACATAGGCTTCGGTTG 60.366 47.826 0.00 0.00 0.00 3.77
2216 2609 2.817844 GGAAAACACATAGGCTTCGGTT 59.182 45.455 0.00 0.00 0.00 4.44
2217 2610 2.039879 AGGAAAACACATAGGCTTCGGT 59.960 45.455 0.00 0.00 0.00 4.69
2218 2611 2.711542 AGGAAAACACATAGGCTTCGG 58.288 47.619 0.00 0.00 0.00 4.30
2219 2612 4.766404 AAAGGAAAACACATAGGCTTCG 57.234 40.909 0.00 0.00 0.00 3.79
2220 2613 6.430000 TGAGTAAAGGAAAACACATAGGCTTC 59.570 38.462 0.00 0.00 0.00 3.86
2221 2614 6.303839 TGAGTAAAGGAAAACACATAGGCTT 58.696 36.000 0.00 0.00 0.00 4.35
2222 2615 5.876357 TGAGTAAAGGAAAACACATAGGCT 58.124 37.500 0.00 0.00 0.00 4.58
2223 2616 6.759497 ATGAGTAAAGGAAAACACATAGGC 57.241 37.500 0.00 0.00 0.00 3.93
2224 2617 8.786826 TGTATGAGTAAAGGAAAACACATAGG 57.213 34.615 0.00 0.00 32.32 2.57
2227 2620 9.520515 AAGATGTATGAGTAAAGGAAAACACAT 57.479 29.630 0.00 0.00 32.71 3.21
2228 2621 8.783093 CAAGATGTATGAGTAAAGGAAAACACA 58.217 33.333 0.00 0.00 0.00 3.72
2229 2622 8.237267 CCAAGATGTATGAGTAAAGGAAAACAC 58.763 37.037 0.00 0.00 0.00 3.32
2230 2623 7.942341 ACCAAGATGTATGAGTAAAGGAAAACA 59.058 33.333 0.00 0.00 0.00 2.83
2231 2624 8.336801 ACCAAGATGTATGAGTAAAGGAAAAC 57.663 34.615 0.00 0.00 0.00 2.43
2232 2625 8.934023 AACCAAGATGTATGAGTAAAGGAAAA 57.066 30.769 0.00 0.00 0.00 2.29
2233 2626 8.934023 AAACCAAGATGTATGAGTAAAGGAAA 57.066 30.769 0.00 0.00 0.00 3.13
2234 2627 8.792633 CAAAACCAAGATGTATGAGTAAAGGAA 58.207 33.333 0.00 0.00 0.00 3.36
2235 2628 7.942341 ACAAAACCAAGATGTATGAGTAAAGGA 59.058 33.333 0.00 0.00 0.00 3.36
2236 2629 8.110860 ACAAAACCAAGATGTATGAGTAAAGG 57.889 34.615 0.00 0.00 0.00 3.11
2253 2646 9.169592 GGAGCACTAAGTATATTAACAAAACCA 57.830 33.333 0.00 0.00 0.00 3.67
2254 2647 9.169592 TGGAGCACTAAGTATATTAACAAAACC 57.830 33.333 0.00 0.00 0.00 3.27
2258 2651 9.817809 CTTCTGGAGCACTAAGTATATTAACAA 57.182 33.333 0.00 0.00 0.00 2.83
2259 2652 9.197306 TCTTCTGGAGCACTAAGTATATTAACA 57.803 33.333 0.00 0.00 0.00 2.41
2260 2653 9.465985 GTCTTCTGGAGCACTAAGTATATTAAC 57.534 37.037 0.00 0.00 0.00 2.01
2261 2654 9.197306 TGTCTTCTGGAGCACTAAGTATATTAA 57.803 33.333 0.00 0.00 0.00 1.40
2262 2655 8.762481 TGTCTTCTGGAGCACTAAGTATATTA 57.238 34.615 0.00 0.00 0.00 0.98
2263 2656 7.661536 TGTCTTCTGGAGCACTAAGTATATT 57.338 36.000 0.00 0.00 0.00 1.28
2264 2657 7.847711 ATGTCTTCTGGAGCACTAAGTATAT 57.152 36.000 0.00 0.00 0.00 0.86
2265 2658 7.999545 ACTATGTCTTCTGGAGCACTAAGTATA 59.000 37.037 0.00 0.00 0.00 1.47
2266 2659 6.836527 ACTATGTCTTCTGGAGCACTAAGTAT 59.163 38.462 0.00 0.00 0.00 2.12
2267 2660 6.188407 ACTATGTCTTCTGGAGCACTAAGTA 58.812 40.000 0.00 0.00 0.00 2.24
2268 2661 5.020132 ACTATGTCTTCTGGAGCACTAAGT 58.980 41.667 0.00 0.00 0.00 2.24
2269 2662 5.590530 ACTATGTCTTCTGGAGCACTAAG 57.409 43.478 0.00 0.00 0.00 2.18
2270 2663 6.360370 AAACTATGTCTTCTGGAGCACTAA 57.640 37.500 0.00 0.00 0.00 2.24
2271 2664 5.105310 GGAAACTATGTCTTCTGGAGCACTA 60.105 44.000 0.00 0.00 0.00 2.74
2272 2665 4.323104 GGAAACTATGTCTTCTGGAGCACT 60.323 45.833 0.00 0.00 0.00 4.40
2273 2666 3.935828 GGAAACTATGTCTTCTGGAGCAC 59.064 47.826 0.00 0.00 0.00 4.40
2274 2667 3.840666 AGGAAACTATGTCTTCTGGAGCA 59.159 43.478 0.00 0.00 40.61 4.26
2275 2668 4.479786 AGGAAACTATGTCTTCTGGAGC 57.520 45.455 0.00 0.00 40.61 4.70
2276 2669 6.936279 TGTAAGGAAACTATGTCTTCTGGAG 58.064 40.000 0.00 0.00 42.68 3.86
2277 2670 6.497259 ACTGTAAGGAAACTATGTCTTCTGGA 59.503 38.462 0.00 0.00 42.68 3.86
2278 2671 6.702329 ACTGTAAGGAAACTATGTCTTCTGG 58.298 40.000 0.00 0.00 42.68 3.86
2279 2672 8.524487 AGTACTGTAAGGAAACTATGTCTTCTG 58.476 37.037 0.00 0.00 42.68 3.02
2280 2673 8.653036 AGTACTGTAAGGAAACTATGTCTTCT 57.347 34.615 0.00 0.00 42.68 2.85
2281 2674 8.741841 AGAGTACTGTAAGGAAACTATGTCTTC 58.258 37.037 0.00 0.00 42.68 2.87
2282 2675 8.653036 AGAGTACTGTAAGGAAACTATGTCTT 57.347 34.615 0.00 0.00 42.68 3.01
2283 2676 9.176460 GTAGAGTACTGTAAGGAAACTATGTCT 57.824 37.037 0.00 0.00 42.68 3.41
2284 2677 9.176460 AGTAGAGTACTGTAAGGAAACTATGTC 57.824 37.037 0.00 0.00 37.38 3.06
2285 2678 9.176460 GAGTAGAGTACTGTAAGGAAACTATGT 57.824 37.037 0.00 0.00 38.59 2.29
2286 2679 8.336806 CGAGTAGAGTACTGTAAGGAAACTATG 58.663 40.741 0.00 0.00 38.59 2.23
2287 2680 8.046107 ACGAGTAGAGTACTGTAAGGAAACTAT 58.954 37.037 0.00 0.00 38.59 2.12
2288 2681 7.332926 CACGAGTAGAGTACTGTAAGGAAACTA 59.667 40.741 0.00 0.00 38.59 2.24
2289 2682 6.149142 CACGAGTAGAGTACTGTAAGGAAACT 59.851 42.308 0.00 0.00 40.68 2.66
2290 2683 6.148480 TCACGAGTAGAGTACTGTAAGGAAAC 59.852 42.308 0.00 0.00 39.59 2.78
2291 2684 6.233434 TCACGAGTAGAGTACTGTAAGGAAA 58.767 40.000 0.00 0.00 39.59 3.13
2292 2685 5.798132 TCACGAGTAGAGTACTGTAAGGAA 58.202 41.667 0.00 0.00 39.59 3.36
2293 2686 5.411831 TCACGAGTAGAGTACTGTAAGGA 57.588 43.478 0.00 0.00 39.59 3.36
2294 2687 6.492007 TTTCACGAGTAGAGTACTGTAAGG 57.508 41.667 0.00 0.00 39.59 2.69
2295 2688 7.749808 TCATTTCACGAGTAGAGTACTGTAAG 58.250 38.462 0.00 0.00 39.59 2.34
2296 2689 7.677454 TCATTTCACGAGTAGAGTACTGTAA 57.323 36.000 0.00 0.00 39.59 2.41
2297 2690 7.677454 TTCATTTCACGAGTAGAGTACTGTA 57.323 36.000 0.00 0.00 39.59 2.74
2298 2691 6.570672 TTCATTTCACGAGTAGAGTACTGT 57.429 37.500 0.00 0.00 39.59 3.55
2299 2692 7.463383 GCATTTCATTTCACGAGTAGAGTACTG 60.463 40.741 0.00 0.00 39.59 2.74
2300 2693 6.531948 GCATTTCATTTCACGAGTAGAGTACT 59.468 38.462 0.00 0.00 42.86 2.73
2301 2694 6.310467 TGCATTTCATTTCACGAGTAGAGTAC 59.690 38.462 0.00 0.00 0.00 2.73
2302 2695 6.394809 TGCATTTCATTTCACGAGTAGAGTA 58.605 36.000 0.00 0.00 0.00 2.59
2303 2696 5.237815 TGCATTTCATTTCACGAGTAGAGT 58.762 37.500 0.00 0.00 0.00 3.24
2304 2697 5.220548 CCTGCATTTCATTTCACGAGTAGAG 60.221 44.000 0.00 0.00 0.00 2.43
2305 2698 4.631377 CCTGCATTTCATTTCACGAGTAGA 59.369 41.667 0.00 0.00 0.00 2.59
2306 2699 4.631377 TCCTGCATTTCATTTCACGAGTAG 59.369 41.667 0.00 0.00 0.00 2.57
2307 2700 4.574892 TCCTGCATTTCATTTCACGAGTA 58.425 39.130 0.00 0.00 0.00 2.59
2308 2701 3.411446 TCCTGCATTTCATTTCACGAGT 58.589 40.909 0.00 0.00 0.00 4.18
2309 2702 4.334759 AGATCCTGCATTTCATTTCACGAG 59.665 41.667 0.00 0.00 0.00 4.18
2310 2703 4.264253 AGATCCTGCATTTCATTTCACGA 58.736 39.130 0.00 0.00 0.00 4.35
2311 2704 4.627611 AGATCCTGCATTTCATTTCACG 57.372 40.909 0.00 0.00 0.00 4.35
2312 2705 6.392354 TCAAAGATCCTGCATTTCATTTCAC 58.608 36.000 0.00 0.00 0.00 3.18
2313 2706 6.593268 TCAAAGATCCTGCATTTCATTTCA 57.407 33.333 0.00 0.00 0.00 2.69
2314 2707 7.224167 GGAATCAAAGATCCTGCATTTCATTTC 59.776 37.037 0.00 0.00 32.75 2.17
2315 2708 7.046033 GGAATCAAAGATCCTGCATTTCATTT 58.954 34.615 0.00 0.00 32.75 2.32
2316 2709 6.579865 GGAATCAAAGATCCTGCATTTCATT 58.420 36.000 0.00 0.00 32.75 2.57
2317 2710 5.221185 CGGAATCAAAGATCCTGCATTTCAT 60.221 40.000 0.00 0.00 33.36 2.57
2318 2711 4.096833 CGGAATCAAAGATCCTGCATTTCA 59.903 41.667 0.00 0.00 33.36 2.69
2319 2712 4.498682 CCGGAATCAAAGATCCTGCATTTC 60.499 45.833 0.00 0.00 33.36 2.17
2320 2713 3.382546 CCGGAATCAAAGATCCTGCATTT 59.617 43.478 0.00 0.00 33.36 2.32
2321 2714 2.954318 CCGGAATCAAAGATCCTGCATT 59.046 45.455 0.00 0.00 33.36 3.56
2322 2715 2.579873 CCGGAATCAAAGATCCTGCAT 58.420 47.619 0.00 0.00 33.36 3.96
2323 2716 2.018644 GCCGGAATCAAAGATCCTGCA 61.019 52.381 5.05 0.00 43.16 4.41
2324 2717 0.665298 GCCGGAATCAAAGATCCTGC 59.335 55.000 5.05 0.00 38.49 4.85
2325 2718 2.042686 TGCCGGAATCAAAGATCCTG 57.957 50.000 5.05 0.00 33.36 3.86
2326 2719 2.755103 GTTTGCCGGAATCAAAGATCCT 59.245 45.455 5.05 0.00 34.50 3.24
2327 2720 2.491693 TGTTTGCCGGAATCAAAGATCC 59.508 45.455 5.05 0.00 34.50 3.36
2328 2721 3.191371 AGTGTTTGCCGGAATCAAAGATC 59.809 43.478 5.05 0.76 34.50 2.75
2329 2722 3.057315 CAGTGTTTGCCGGAATCAAAGAT 60.057 43.478 5.05 0.00 34.50 2.40
2330 2723 2.293122 CAGTGTTTGCCGGAATCAAAGA 59.707 45.455 5.05 1.62 34.50 2.52
2331 2724 2.293122 TCAGTGTTTGCCGGAATCAAAG 59.707 45.455 5.05 0.00 34.50 2.77
2332 2725 2.302260 TCAGTGTTTGCCGGAATCAAA 58.698 42.857 5.05 3.12 0.00 2.69
2333 2726 1.974265 TCAGTGTTTGCCGGAATCAA 58.026 45.000 5.05 0.00 0.00 2.57
2334 2727 2.198827 ATCAGTGTTTGCCGGAATCA 57.801 45.000 5.05 0.00 0.00 2.57
2335 2728 3.575965 AAATCAGTGTTTGCCGGAATC 57.424 42.857 5.05 0.00 0.00 2.52
2336 2729 3.554752 CCAAAATCAGTGTTTGCCGGAAT 60.555 43.478 5.05 0.00 35.13 3.01
2337 2730 2.223923 CCAAAATCAGTGTTTGCCGGAA 60.224 45.455 5.05 0.00 35.13 4.30
2338 2731 1.339610 CCAAAATCAGTGTTTGCCGGA 59.660 47.619 5.05 0.00 35.13 5.14
2339 2732 1.782044 CCAAAATCAGTGTTTGCCGG 58.218 50.000 0.00 0.00 35.13 6.13
2340 2733 1.139163 GCCAAAATCAGTGTTTGCCG 58.861 50.000 1.59 0.00 35.13 5.69
2341 2734 1.139163 CGCCAAAATCAGTGTTTGCC 58.861 50.000 1.59 0.00 35.13 4.52
2342 2735 2.132740 TCGCCAAAATCAGTGTTTGC 57.867 45.000 1.59 0.00 35.13 3.68
2343 2736 4.297510 TGAATCGCCAAAATCAGTGTTTG 58.702 39.130 0.35 0.35 36.03 2.93
2344 2737 4.582701 TGAATCGCCAAAATCAGTGTTT 57.417 36.364 0.00 0.00 0.00 2.83
2345 2738 4.582701 TTGAATCGCCAAAATCAGTGTT 57.417 36.364 0.00 0.00 0.00 3.32
2346 2739 4.218200 TCATTGAATCGCCAAAATCAGTGT 59.782 37.500 0.00 0.00 33.04 3.55
2347 2740 4.735985 TCATTGAATCGCCAAAATCAGTG 58.264 39.130 0.00 0.00 32.66 3.66
2348 2741 5.587388 ATCATTGAATCGCCAAAATCAGT 57.413 34.783 0.00 0.00 0.00 3.41
2349 2742 5.461078 GGAATCATTGAATCGCCAAAATCAG 59.539 40.000 0.00 0.00 0.00 2.90
2350 2743 5.105432 TGGAATCATTGAATCGCCAAAATCA 60.105 36.000 0.00 0.00 0.00 2.57
2351 2744 5.350633 TGGAATCATTGAATCGCCAAAATC 58.649 37.500 0.00 0.00 0.00 2.17
2352 2745 5.341872 TGGAATCATTGAATCGCCAAAAT 57.658 34.783 0.00 0.00 0.00 1.82
2353 2746 4.797800 TGGAATCATTGAATCGCCAAAA 57.202 36.364 0.00 0.00 0.00 2.44
2354 2747 4.746729 CTTGGAATCATTGAATCGCCAAA 58.253 39.130 11.47 0.00 33.96 3.28
2355 2748 3.429272 GCTTGGAATCATTGAATCGCCAA 60.429 43.478 0.00 0.00 33.37 4.52
2356 2749 2.099592 GCTTGGAATCATTGAATCGCCA 59.900 45.455 0.00 0.00 0.00 5.69
2357 2750 2.099592 TGCTTGGAATCATTGAATCGCC 59.900 45.455 0.00 0.00 0.00 5.54
2358 2751 3.111098 GTGCTTGGAATCATTGAATCGC 58.889 45.455 0.00 0.00 0.00 4.58
2359 2752 4.627611 AGTGCTTGGAATCATTGAATCG 57.372 40.909 0.00 0.00 0.00 3.34
2360 2753 6.317140 TCACTAGTGCTTGGAATCATTGAATC 59.683 38.462 18.45 0.00 0.00 2.52
2361 2754 6.182627 TCACTAGTGCTTGGAATCATTGAAT 58.817 36.000 18.45 0.00 0.00 2.57
2362 2755 5.559770 TCACTAGTGCTTGGAATCATTGAA 58.440 37.500 18.45 0.00 0.00 2.69
2363 2756 5.046376 TCTCACTAGTGCTTGGAATCATTGA 60.046 40.000 18.45 0.00 0.00 2.57
2364 2757 5.181009 TCTCACTAGTGCTTGGAATCATTG 58.819 41.667 18.45 0.00 0.00 2.82
2365 2758 5.426689 TCTCACTAGTGCTTGGAATCATT 57.573 39.130 18.45 0.00 0.00 2.57
2366 2759 5.129980 TGATCTCACTAGTGCTTGGAATCAT 59.870 40.000 18.45 0.66 0.00 2.45
2367 2760 4.467438 TGATCTCACTAGTGCTTGGAATCA 59.533 41.667 18.45 15.00 0.00 2.57
2368 2761 5.016051 TGATCTCACTAGTGCTTGGAATC 57.984 43.478 18.45 12.97 0.00 2.52
2369 2762 5.426689 TTGATCTCACTAGTGCTTGGAAT 57.573 39.130 18.45 4.84 0.00 3.01
2370 2763 4.890158 TTGATCTCACTAGTGCTTGGAA 57.110 40.909 18.45 5.32 0.00 3.53
2371 2764 4.890158 TTTGATCTCACTAGTGCTTGGA 57.110 40.909 18.45 12.77 0.00 3.53
2372 2765 4.154918 GGTTTTGATCTCACTAGTGCTTGG 59.845 45.833 18.45 8.09 0.00 3.61
2373 2766 4.756642 TGGTTTTGATCTCACTAGTGCTTG 59.243 41.667 18.45 10.47 0.00 4.01
2374 2767 4.973168 TGGTTTTGATCTCACTAGTGCTT 58.027 39.130 18.45 4.92 0.00 3.91
2375 2768 4.623932 TGGTTTTGATCTCACTAGTGCT 57.376 40.909 18.45 5.11 0.00 4.40
2376 2769 4.378874 GCTTGGTTTTGATCTCACTAGTGC 60.379 45.833 18.45 4.65 0.00 4.40
2377 2770 4.154918 GGCTTGGTTTTGATCTCACTAGTG 59.845 45.833 17.17 17.17 0.00 2.74
2378 2771 4.327680 GGCTTGGTTTTGATCTCACTAGT 58.672 43.478 0.00 0.00 0.00 2.57
2379 2772 3.372206 CGGCTTGGTTTTGATCTCACTAG 59.628 47.826 0.00 0.00 0.00 2.57
2380 2773 3.334691 CGGCTTGGTTTTGATCTCACTA 58.665 45.455 0.00 0.00 0.00 2.74
2381 2774 2.154462 CGGCTTGGTTTTGATCTCACT 58.846 47.619 0.00 0.00 0.00 3.41
2382 2775 1.200020 CCGGCTTGGTTTTGATCTCAC 59.800 52.381 0.00 0.00 0.00 3.51
2383 2776 1.073125 TCCGGCTTGGTTTTGATCTCA 59.927 47.619 0.00 0.00 39.52 3.27
2384 2777 1.821216 TCCGGCTTGGTTTTGATCTC 58.179 50.000 0.00 0.00 39.52 2.75
2385 2778 2.094675 CATCCGGCTTGGTTTTGATCT 58.905 47.619 0.00 0.00 39.52 2.75
2386 2779 1.134946 CCATCCGGCTTGGTTTTGATC 59.865 52.381 13.55 0.00 39.52 2.92
2387 2780 1.185315 CCATCCGGCTTGGTTTTGAT 58.815 50.000 13.55 0.00 39.52 2.57
2388 2781 0.178975 ACCATCCGGCTTGGTTTTGA 60.179 50.000 19.79 0.00 45.19 2.69
2389 2782 2.350738 ACCATCCGGCTTGGTTTTG 58.649 52.632 19.79 0.74 45.19 2.44
2390 2783 4.943373 ACCATCCGGCTTGGTTTT 57.057 50.000 19.79 1.86 45.19 2.43
2400 2793 2.494918 GTCACTCCCGACCATCCG 59.505 66.667 0.00 0.00 0.00 4.18
2406 2799 1.765230 ATAGACAGGTCACTCCCGAC 58.235 55.000 1.84 0.00 36.75 4.79
2407 2800 3.552875 CTTATAGACAGGTCACTCCCGA 58.447 50.000 1.84 0.00 36.75 5.14
2408 2801 2.623889 CCTTATAGACAGGTCACTCCCG 59.376 54.545 1.84 0.00 36.75 5.14
2409 2802 3.644335 ACCTTATAGACAGGTCACTCCC 58.356 50.000 1.84 0.00 41.08 4.30
2410 2803 6.786967 TTTACCTTATAGACAGGTCACTCC 57.213 41.667 1.84 0.00 44.08 3.85
2434 2827 8.972127 GGGATAGAGCATATATGAGTCACTTTA 58.028 37.037 17.10 3.89 0.00 1.85
2435 2828 7.455953 TGGGATAGAGCATATATGAGTCACTTT 59.544 37.037 17.10 1.82 0.00 2.66
2436 2829 6.956435 TGGGATAGAGCATATATGAGTCACTT 59.044 38.462 17.10 1.80 0.00 3.16
2437 2830 6.497640 TGGGATAGAGCATATATGAGTCACT 58.502 40.000 17.10 3.28 0.00 3.41
2438 2831 6.782082 TGGGATAGAGCATATATGAGTCAC 57.218 41.667 17.10 7.52 0.00 3.67
2439 2832 7.287235 CAGATGGGATAGAGCATATATGAGTCA 59.713 40.741 17.10 0.00 0.00 3.41
2440 2833 7.505248 TCAGATGGGATAGAGCATATATGAGTC 59.495 40.741 17.10 11.43 0.00 3.36
2441 2834 7.360643 TCAGATGGGATAGAGCATATATGAGT 58.639 38.462 17.10 2.27 0.00 3.41
2442 2835 7.836479 TCAGATGGGATAGAGCATATATGAG 57.164 40.000 17.10 0.00 0.00 2.90
2443 2836 8.008922 TGATCAGATGGGATAGAGCATATATGA 58.991 37.037 17.10 0.00 0.00 2.15
2444 2837 8.191534 TGATCAGATGGGATAGAGCATATATG 57.808 38.462 8.45 8.45 0.00 1.78
2445 2838 8.975925 ATGATCAGATGGGATAGAGCATATAT 57.024 34.615 0.09 0.00 35.59 0.86
2446 2839 8.794364 AATGATCAGATGGGATAGAGCATATA 57.206 34.615 0.09 0.00 36.24 0.86
2447 2840 7.693533 AATGATCAGATGGGATAGAGCATAT 57.306 36.000 0.09 0.00 36.24 1.78
2448 2841 7.365384 GGAAATGATCAGATGGGATAGAGCATA 60.365 40.741 0.09 0.00 36.24 3.14
2449 2842 6.390048 AAATGATCAGATGGGATAGAGCAT 57.610 37.500 0.09 0.00 38.61 3.79
2450 2843 5.280368 GGAAATGATCAGATGGGATAGAGCA 60.280 44.000 0.09 0.00 0.00 4.26
2451 2844 5.184711 GGAAATGATCAGATGGGATAGAGC 58.815 45.833 0.09 0.00 0.00 4.09
2452 2845 5.488203 AGGGAAATGATCAGATGGGATAGAG 59.512 44.000 0.09 0.00 0.00 2.43
2453 2846 5.250082 CAGGGAAATGATCAGATGGGATAGA 59.750 44.000 0.09 0.00 0.00 1.98
2454 2847 5.013913 ACAGGGAAATGATCAGATGGGATAG 59.986 44.000 0.09 0.00 0.00 2.08
2455 2848 4.915809 ACAGGGAAATGATCAGATGGGATA 59.084 41.667 0.09 0.00 0.00 2.59
2456 2849 3.725797 ACAGGGAAATGATCAGATGGGAT 59.274 43.478 0.09 0.00 0.00 3.85
2457 2850 3.125656 ACAGGGAAATGATCAGATGGGA 58.874 45.455 0.09 0.00 0.00 4.37
2458 2851 3.589951 ACAGGGAAATGATCAGATGGG 57.410 47.619 0.09 0.00 0.00 4.00
2459 2852 4.098960 CCAAACAGGGAAATGATCAGATGG 59.901 45.833 0.09 0.00 0.00 3.51
2460 2853 5.258456 CCAAACAGGGAAATGATCAGATG 57.742 43.478 0.09 0.00 0.00 2.90
2474 2867 0.948678 CCACGTTGTACCCAAACAGG 59.051 55.000 0.00 0.00 30.94 4.00
2475 2868 0.948678 CCCACGTTGTACCCAAACAG 59.051 55.000 0.00 0.00 30.94 3.16
2476 2869 0.545171 TCCCACGTTGTACCCAAACA 59.455 50.000 0.00 0.00 30.94 2.83
2477 2870 1.232119 CTCCCACGTTGTACCCAAAC 58.768 55.000 0.00 0.00 30.94 2.93
2478 2871 0.108963 CCTCCCACGTTGTACCCAAA 59.891 55.000 0.00 0.00 30.94 3.28
2479 2872 0.763604 TCCTCCCACGTTGTACCCAA 60.764 55.000 0.00 0.00 0.00 4.12
2480 2873 1.152290 TCCTCCCACGTTGTACCCA 60.152 57.895 0.00 0.00 0.00 4.51
2481 2874 1.595357 CTCCTCCCACGTTGTACCC 59.405 63.158 0.00 0.00 0.00 3.69
2482 2875 0.901580 TCCTCCTCCCACGTTGTACC 60.902 60.000 0.00 0.00 0.00 3.34
2483 2876 0.531200 CTCCTCCTCCCACGTTGTAC 59.469 60.000 0.00 0.00 0.00 2.90
2484 2877 0.113776 ACTCCTCCTCCCACGTTGTA 59.886 55.000 0.00 0.00 0.00 2.41
2485 2878 0.113776 TACTCCTCCTCCCACGTTGT 59.886 55.000 0.00 0.00 0.00 3.32
2486 2879 1.486211 ATACTCCTCCTCCCACGTTG 58.514 55.000 0.00 0.00 0.00 4.10
2487 2880 2.249309 AATACTCCTCCTCCCACGTT 57.751 50.000 0.00 0.00 0.00 3.99
2488 2881 2.249309 AAATACTCCTCCTCCCACGT 57.751 50.000 0.00 0.00 0.00 4.49
2489 2882 3.449737 TGTTAAATACTCCTCCTCCCACG 59.550 47.826 0.00 0.00 0.00 4.94
2490 2883 5.431179 TTGTTAAATACTCCTCCTCCCAC 57.569 43.478 0.00 0.00 0.00 4.61
2491 2884 6.457159 TTTTGTTAAATACTCCTCCTCCCA 57.543 37.500 0.00 0.00 0.00 4.37
2513 2906 3.974871 ACGCGAAATGTGGTAGTTTTT 57.025 38.095 15.93 0.00 0.00 1.94
2514 2907 4.319694 GGTTACGCGAAATGTGGTAGTTTT 60.320 41.667 15.93 0.00 0.00 2.43
2515 2908 3.187022 GGTTACGCGAAATGTGGTAGTTT 59.813 43.478 15.93 0.00 0.00 2.66
2516 2909 2.738314 GGTTACGCGAAATGTGGTAGTT 59.262 45.455 15.93 0.00 0.00 2.24
2517 2910 2.288948 TGGTTACGCGAAATGTGGTAGT 60.289 45.455 15.93 0.00 0.00 2.73
2518 2911 2.339418 TGGTTACGCGAAATGTGGTAG 58.661 47.619 15.93 0.00 0.00 3.18
2519 2912 2.452295 TGGTTACGCGAAATGTGGTA 57.548 45.000 15.93 0.00 0.00 3.25
2520 2913 1.466950 CATGGTTACGCGAAATGTGGT 59.533 47.619 15.93 0.00 0.00 4.16
2521 2914 1.793714 GCATGGTTACGCGAAATGTGG 60.794 52.381 15.93 0.00 0.00 4.17
2522 2915 1.534028 GCATGGTTACGCGAAATGTG 58.466 50.000 15.93 5.42 0.00 3.21
2523 2916 0.450184 GGCATGGTTACGCGAAATGT 59.550 50.000 15.93 0.00 0.00 2.71
2524 2917 0.732571 AGGCATGGTTACGCGAAATG 59.267 50.000 15.93 9.82 0.00 2.32
2525 2918 1.937899 GTAGGCATGGTTACGCGAAAT 59.062 47.619 15.93 0.00 0.00 2.17
2526 2919 1.337917 TGTAGGCATGGTTACGCGAAA 60.338 47.619 15.93 0.00 0.00 3.46
2527 2920 0.246910 TGTAGGCATGGTTACGCGAA 59.753 50.000 15.93 0.00 0.00 4.70
2528 2921 0.246910 TTGTAGGCATGGTTACGCGA 59.753 50.000 15.93 0.00 0.00 5.87
2529 2922 0.650512 CTTGTAGGCATGGTTACGCG 59.349 55.000 3.53 3.53 0.00 6.01
2530 2923 0.377203 GCTTGTAGGCATGGTTACGC 59.623 55.000 0.00 0.00 0.00 4.42
2531 2924 2.024176 AGCTTGTAGGCATGGTTACG 57.976 50.000 0.00 0.00 34.17 3.18
2532 2925 3.203716 GGTAGCTTGTAGGCATGGTTAC 58.796 50.000 0.00 0.00 33.49 2.50
2533 2926 2.841266 TGGTAGCTTGTAGGCATGGTTA 59.159 45.455 0.00 0.00 33.49 2.85
2534 2927 1.633432 TGGTAGCTTGTAGGCATGGTT 59.367 47.619 0.00 0.00 33.49 3.67
2535 2928 1.065418 GTGGTAGCTTGTAGGCATGGT 60.065 52.381 0.00 0.00 35.24 3.55
2536 2929 1.210478 AGTGGTAGCTTGTAGGCATGG 59.790 52.381 0.00 0.00 34.17 3.66
2537 2930 2.698855 AGTGGTAGCTTGTAGGCATG 57.301 50.000 0.00 0.00 34.17 4.06
2538 2931 3.347216 CAAAGTGGTAGCTTGTAGGCAT 58.653 45.455 0.00 0.00 34.17 4.40
2539 2932 2.778299 CAAAGTGGTAGCTTGTAGGCA 58.222 47.619 0.00 0.00 34.17 4.75
2540 2933 1.468914 GCAAAGTGGTAGCTTGTAGGC 59.531 52.381 0.00 0.00 0.00 3.93
2541 2934 2.778299 TGCAAAGTGGTAGCTTGTAGG 58.222 47.619 0.00 0.00 0.00 3.18
2542 2935 4.829064 TTTGCAAAGTGGTAGCTTGTAG 57.171 40.909 8.05 0.00 0.00 2.74
2543 2936 5.782893 AATTTGCAAAGTGGTAGCTTGTA 57.217 34.783 18.19 0.00 0.00 2.41
2544 2937 4.670896 AATTTGCAAAGTGGTAGCTTGT 57.329 36.364 18.19 0.00 0.00 3.16
2545 2938 4.810491 ACAAATTTGCAAAGTGGTAGCTTG 59.190 37.500 17.65 10.28 0.00 4.01
2546 2939 4.810491 CACAAATTTGCAAAGTGGTAGCTT 59.190 37.500 18.58 2.09 0.00 3.74
2547 2940 4.370917 CACAAATTTGCAAAGTGGTAGCT 58.629 39.130 18.58 0.00 0.00 3.32
2548 2941 3.059665 GCACAAATTTGCAAAGTGGTAGC 60.060 43.478 18.58 18.64 42.49 3.58
2549 2942 3.494251 GGCACAAATTTGCAAAGTGGTAG 59.506 43.478 18.58 13.77 44.94 3.18
2550 2943 3.462021 GGCACAAATTTGCAAAGTGGTA 58.538 40.909 18.58 0.00 44.94 3.25
2551 2944 2.287769 GGCACAAATTTGCAAAGTGGT 58.712 42.857 23.57 19.62 44.94 4.16
2552 2945 1.261089 CGGCACAAATTTGCAAAGTGG 59.739 47.619 23.57 19.04 44.94 4.00
2553 2946 2.200067 TCGGCACAAATTTGCAAAGTG 58.800 42.857 18.19 19.32 44.94 3.16
2554 2947 2.593346 TCGGCACAAATTTGCAAAGT 57.407 40.000 18.19 12.65 44.94 2.66
2555 2948 3.940657 TTTCGGCACAAATTTGCAAAG 57.059 38.095 18.19 6.69 44.94 2.77
2556 2949 3.686726 AGTTTTCGGCACAAATTTGCAAA 59.313 34.783 18.12 15.44 44.94 3.68
2557 2950 3.265791 AGTTTTCGGCACAAATTTGCAA 58.734 36.364 18.12 0.00 44.94 4.08
2558 2951 2.898705 AGTTTTCGGCACAAATTTGCA 58.101 38.095 18.12 0.00 44.94 4.08
2559 2952 3.183574 GGTAGTTTTCGGCACAAATTTGC 59.816 43.478 18.12 5.80 42.18 3.68
2560 2953 4.363999 TGGTAGTTTTCGGCACAAATTTG 58.636 39.130 16.67 16.67 0.00 2.32
2561 2954 4.657436 TGGTAGTTTTCGGCACAAATTT 57.343 36.364 0.00 0.00 0.00 1.82
2562 2955 4.864704 ATGGTAGTTTTCGGCACAAATT 57.135 36.364 0.00 0.00 0.00 1.82
2563 2956 4.864704 AATGGTAGTTTTCGGCACAAAT 57.135 36.364 0.00 0.00 0.00 2.32
2564 2957 4.657436 AAATGGTAGTTTTCGGCACAAA 57.343 36.364 0.00 0.00 0.00 2.83
2565 2958 4.657436 AAAATGGTAGTTTTCGGCACAA 57.343 36.364 0.00 0.00 0.00 3.33
2566 2959 4.657436 AAAAATGGTAGTTTTCGGCACA 57.343 36.364 0.00 0.00 31.29 4.57
2591 2984 9.328845 ACACGGTAGTTTTTAGTCAAAGATTAA 57.671 29.630 0.00 0.00 0.00 1.40
2592 2985 8.891671 ACACGGTAGTTTTTAGTCAAAGATTA 57.108 30.769 0.00 0.00 0.00 1.75
2593 2986 7.713942 AGACACGGTAGTTTTTAGTCAAAGATT 59.286 33.333 0.00 0.00 0.00 2.40
2594 2987 7.170998 CAGACACGGTAGTTTTTAGTCAAAGAT 59.829 37.037 0.00 0.00 0.00 2.40
2595 2988 6.477688 CAGACACGGTAGTTTTTAGTCAAAGA 59.522 38.462 0.00 0.00 0.00 2.52
2596 2989 6.477688 TCAGACACGGTAGTTTTTAGTCAAAG 59.522 38.462 0.00 0.00 0.00 2.77
2597 2990 6.339730 TCAGACACGGTAGTTTTTAGTCAAA 58.660 36.000 0.00 0.00 0.00 2.69
2598 2991 5.904941 TCAGACACGGTAGTTTTTAGTCAA 58.095 37.500 0.00 0.00 0.00 3.18
2599 2992 5.518848 TCAGACACGGTAGTTTTTAGTCA 57.481 39.130 0.00 0.00 0.00 3.41
2600 2993 6.833342 TTTCAGACACGGTAGTTTTTAGTC 57.167 37.500 0.00 0.00 0.00 2.59
2601 2994 6.820152 ACTTTTCAGACACGGTAGTTTTTAGT 59.180 34.615 0.00 0.00 0.00 2.24
2602 2995 7.123830 CACTTTTCAGACACGGTAGTTTTTAG 58.876 38.462 0.00 0.00 0.00 1.85
2603 2996 6.037391 CCACTTTTCAGACACGGTAGTTTTTA 59.963 38.462 0.00 0.00 0.00 1.52
2604 2997 5.163693 CCACTTTTCAGACACGGTAGTTTTT 60.164 40.000 0.00 0.00 0.00 1.94
2605 2998 4.334481 CCACTTTTCAGACACGGTAGTTTT 59.666 41.667 0.00 0.00 0.00 2.43
2606 2999 3.875134 CCACTTTTCAGACACGGTAGTTT 59.125 43.478 0.00 0.00 0.00 2.66
2607 3000 3.463944 CCACTTTTCAGACACGGTAGTT 58.536 45.455 0.00 0.00 0.00 2.24
2608 3001 2.805657 GCCACTTTTCAGACACGGTAGT 60.806 50.000 0.00 0.00 0.00 2.73
2609 3002 1.798813 GCCACTTTTCAGACACGGTAG 59.201 52.381 0.00 0.00 0.00 3.18
2610 3003 1.414919 AGCCACTTTTCAGACACGGTA 59.585 47.619 0.00 0.00 0.00 4.02
2611 3004 0.180406 AGCCACTTTTCAGACACGGT 59.820 50.000 0.00 0.00 0.00 4.83
2612 3005 0.588252 CAGCCACTTTTCAGACACGG 59.412 55.000 0.00 0.00 0.00 4.94
2613 3006 1.581934 TCAGCCACTTTTCAGACACG 58.418 50.000 0.00 0.00 0.00 4.49
2614 3007 3.364366 CGAATCAGCCACTTTTCAGACAC 60.364 47.826 0.00 0.00 0.00 3.67
2615 3008 2.807967 CGAATCAGCCACTTTTCAGACA 59.192 45.455 0.00 0.00 0.00 3.41
2616 3009 2.160417 CCGAATCAGCCACTTTTCAGAC 59.840 50.000 0.00 0.00 0.00 3.51
2617 3010 2.426522 CCGAATCAGCCACTTTTCAGA 58.573 47.619 0.00 0.00 0.00 3.27
2618 3011 1.135575 GCCGAATCAGCCACTTTTCAG 60.136 52.381 0.00 0.00 0.00 3.02
2619 3012 0.881118 GCCGAATCAGCCACTTTTCA 59.119 50.000 0.00 0.00 0.00 2.69
2620 3013 1.168714 AGCCGAATCAGCCACTTTTC 58.831 50.000 0.00 0.00 0.00 2.29
2621 3014 2.290323 ACTAGCCGAATCAGCCACTTTT 60.290 45.455 0.00 0.00 0.00 2.27
2622 3015 1.279271 ACTAGCCGAATCAGCCACTTT 59.721 47.619 0.00 0.00 0.00 2.66
2623 3016 0.905357 ACTAGCCGAATCAGCCACTT 59.095 50.000 0.00 0.00 0.00 3.16
2624 3017 0.461961 GACTAGCCGAATCAGCCACT 59.538 55.000 0.00 0.00 0.00 4.00
2625 3018 0.461961 AGACTAGCCGAATCAGCCAC 59.538 55.000 0.00 0.00 0.00 5.01
2626 3019 2.067365 TAGACTAGCCGAATCAGCCA 57.933 50.000 0.00 0.00 0.00 4.75
2627 3020 3.454371 TTTAGACTAGCCGAATCAGCC 57.546 47.619 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.