Multiple sequence alignment - TraesCS1B01G042600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G042600 chr1B 100.000 2684 0 0 1 2684 22163501 22160818 0.000000e+00 4957
1 TraesCS1B01G042600 chr1B 92.606 1420 82 3 1 1398 17249840 17251258 0.000000e+00 2019
2 TraesCS1B01G042600 chr1B 92.371 1088 79 4 312 1398 22279360 22278276 0.000000e+00 1546
3 TraesCS1B01G042600 chr1B 93.548 713 42 4 688 1398 7556987 7556277 0.000000e+00 1059
4 TraesCS1B01G042600 chr1B 92.188 704 43 7 1379 2080 17251279 17251972 0.000000e+00 985
5 TraesCS1B01G042600 chr1B 91.384 708 48 7 1379 2080 7556256 7555556 0.000000e+00 957
6 TraesCS1B01G042600 chr1B 91.064 705 46 9 1379 2080 22278255 22277565 0.000000e+00 937
7 TraesCS1B01G042600 chr1B 95.035 282 14 0 1 282 22288668 22288387 6.820000e-121 444
8 TraesCS1B01G042600 chr1B 87.651 332 17 7 155 465 7557796 7557468 5.460000e-97 364
9 TraesCS1B01G042600 chr2B 91.270 126 11 0 1 126 154138663 154138788 3.550000e-39 172
10 TraesCS1B01G042600 chr1D 83.516 182 27 2 283 461 3146362 3146543 1.650000e-37 167
11 TraesCS1B01G042600 chr3B 86.232 138 18 1 1 138 177770294 177770430 5.990000e-32 148
12 TraesCS1B01G042600 chr1A 80.663 181 25 6 283 461 4547872 4548044 6.030000e-27 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G042600 chr1B 22160818 22163501 2683 True 4957.000000 4957 100.0000 1 2684 1 chr1B.!!$R1 2683
1 TraesCS1B01G042600 chr1B 17249840 17251972 2132 False 1502.000000 2019 92.3970 1 2080 2 chr1B.!!$F1 2079
2 TraesCS1B01G042600 chr1B 22277565 22279360 1795 True 1241.500000 1546 91.7175 312 2080 2 chr1B.!!$R4 1768
3 TraesCS1B01G042600 chr1B 7555556 7557796 2240 True 793.333333 1059 90.8610 155 2080 3 chr1B.!!$R3 1925

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
768 1087 0.317479 GCCAGTTAGTCACCGACAGT 59.683 55.0 0.0 0.0 34.6 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2163 2530 0.106918 TCCCGCGATGCCCTTTTTAT 60.107 50.0 8.23 0.0 0.0 1.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 5.794687 TTGATTATTAGCCGATTATGCCG 57.205 39.130 0.00 0.00 0.00 5.69
49 50 2.165641 CCGATTATGCCGGTGCTATCTA 59.834 50.000 1.90 0.00 41.91 1.98
58 59 3.005897 GCCGGTGCTATCTATTCTCTTCA 59.994 47.826 1.90 0.00 33.53 3.02
245 246 5.113502 AGATTTACAACAGAGCTTGCAAC 57.886 39.130 0.00 0.00 0.00 4.17
268 269 1.845664 TGGGGTCAACTGGCAGCTA 60.846 57.895 15.89 0.00 0.00 3.32
321 343 8.018677 TGACTCACGAGACTGAAAAATTAATC 57.981 34.615 0.00 0.00 0.00 1.75
345 367 7.461749 TCTCTTTCTTCCTTGTATTTGGTGAT 58.538 34.615 0.00 0.00 0.00 3.06
431 453 5.355596 CAAGTGGAAGTTTTGTAATGCCAA 58.644 37.500 0.00 0.00 0.00 4.52
433 455 6.909550 AGTGGAAGTTTTGTAATGCCAATA 57.090 33.333 0.00 0.00 0.00 1.90
481 503 2.088423 GTCGGTGTGGCCATTTGATTA 58.912 47.619 9.72 0.00 36.97 1.75
545 567 6.479972 TTCCTCATGATTATACTGGTTCGT 57.520 37.500 0.00 0.00 0.00 3.85
546 568 7.591421 TTCCTCATGATTATACTGGTTCGTA 57.409 36.000 0.00 0.00 0.00 3.43
582 604 4.865925 GCTGTGTACGACCATTGTATAACA 59.134 41.667 0.00 0.00 0.00 2.41
583 605 5.522460 GCTGTGTACGACCATTGTATAACAT 59.478 40.000 0.00 0.00 0.00 2.71
673 719 2.097036 CTTCTGAGCATTCCAATGGCA 58.903 47.619 0.00 0.00 36.90 4.92
683 729 0.612732 TCCAATGGCAGCCCTTCTTG 60.613 55.000 9.64 7.51 0.00 3.02
714 1033 7.381948 TGTGCTAACATTGTAAATGCAAAAGAG 59.618 33.333 0.00 0.00 31.63 2.85
730 1049 5.221303 GCAAAAGAGGCCTAATTGCATATCA 60.221 40.000 30.24 0.00 41.32 2.15
731 1050 6.517864 GCAAAAGAGGCCTAATTGCATATCAT 60.518 38.462 30.24 3.68 41.32 2.45
768 1087 0.317479 GCCAGTTAGTCACCGACAGT 59.683 55.000 0.00 0.00 34.60 3.55
783 1102 5.603596 ACCGACAGTGACAGTAATTAAACA 58.396 37.500 0.00 0.00 0.00 2.83
913 1232 1.136305 ACATGATGCATTTGCTGAGGC 59.864 47.619 0.00 0.00 42.66 4.70
918 1237 0.540133 TGCATTTGCTGAGGCCTGAA 60.540 50.000 12.00 0.00 42.66 3.02
962 1282 2.889045 CACATAGCCAAGGCATAAGCAT 59.111 45.455 14.40 0.00 44.61 3.79
963 1283 2.889045 ACATAGCCAAGGCATAAGCATG 59.111 45.455 14.40 8.59 44.61 4.06
984 1304 9.543783 AGCATGCTATATATAGACATGTGATTG 57.456 33.333 31.26 20.45 41.51 2.67
986 1306 8.771766 CATGCTATATATAGACATGTGATTGCC 58.228 37.037 27.72 10.91 38.54 4.52
993 1313 8.978874 ATATAGACATGTGATTGCCTTTGTTA 57.021 30.769 1.15 0.00 0.00 2.41
1010 1331 3.892284 TGTTACTCTCCACAGCCAAAAA 58.108 40.909 0.00 0.00 0.00 1.94
1018 1339 3.565307 TCCACAGCCAAAAACAAGAGAT 58.435 40.909 0.00 0.00 0.00 2.75
1054 1375 2.486370 GCTATTTCTTGCCCTCTCCTCC 60.486 54.545 0.00 0.00 0.00 4.30
1055 1376 1.673767 ATTTCTTGCCCTCTCCTCCA 58.326 50.000 0.00 0.00 0.00 3.86
1062 1383 1.768684 GCCCTCTCCTCCACACACAA 61.769 60.000 0.00 0.00 0.00 3.33
1063 1384 0.035458 CCCTCTCCTCCACACACAAC 59.965 60.000 0.00 0.00 0.00 3.32
1070 1391 1.855213 CTCCACACACAACCATGGCG 61.855 60.000 13.04 5.85 31.87 5.69
1079 1400 0.817013 CAACCATGGCGGCTGTTATT 59.183 50.000 13.04 0.00 39.03 1.40
1253 1574 2.757980 TTTACGAAGGTGCAGGCCCC 62.758 60.000 0.00 0.00 0.00 5.80
1344 1665 1.533338 CGTTCGAGGATCCAAGGTACG 60.533 57.143 15.82 13.44 0.00 3.67
1346 1667 1.386533 TCGAGGATCCAAGGTACGAC 58.613 55.000 15.82 0.00 0.00 4.34
1347 1668 1.100510 CGAGGATCCAAGGTACGACA 58.899 55.000 15.82 0.00 0.00 4.35
1355 1676 6.943718 AGGATCCAAGGTACGACATTTTTAAA 59.056 34.615 15.82 0.00 0.00 1.52
1544 1904 6.486056 TGGGTTATTTAAGTATGCAACTGGA 58.514 36.000 0.00 0.00 38.88 3.86
1622 1982 4.889409 ACCATCGAAGTATGCAATCCAAAT 59.111 37.500 0.00 0.00 0.00 2.32
1663 2023 6.968904 GGTCAAAGACGAACGTCATAACTATA 59.031 38.462 25.13 3.92 46.76 1.31
1664 2024 7.646922 GGTCAAAGACGAACGTCATAACTATAT 59.353 37.037 25.13 2.74 46.76 0.86
1665 2025 9.655769 GTCAAAGACGAACGTCATAACTATATA 57.344 33.333 25.13 1.59 46.76 0.86
1719 2079 0.381801 CGCATTTCCATGTACCAGCC 59.618 55.000 0.00 0.00 32.28 4.85
1722 2082 2.223876 GCATTTCCATGTACCAGCCATG 60.224 50.000 0.00 0.00 39.50 3.66
1723 2083 1.473258 TTTCCATGTACCAGCCATGC 58.527 50.000 0.00 0.00 38.67 4.06
1735 2095 1.134907 CAGCCATGCATGACCCTTTTC 60.135 52.381 28.31 6.23 0.00 2.29
1744 2104 1.337118 TGACCCTTTTCAATGGTGGC 58.663 50.000 0.00 0.00 30.97 5.01
1751 2111 3.452474 CTTTTCAATGGTGGCGTTTCAA 58.548 40.909 0.00 0.00 0.00 2.69
1778 2138 7.843490 TGTTCCCTTGTATTTTCTCTATTCG 57.157 36.000 0.00 0.00 0.00 3.34
1780 2140 6.801718 TCCCTTGTATTTTCTCTATTCGGA 57.198 37.500 0.00 0.00 0.00 4.55
1785 2145 7.928706 CCTTGTATTTTCTCTATTCGGAGTGAT 59.071 37.037 0.00 0.00 35.11 3.06
1830 2191 6.800072 TTTCAAGGTGTTACTTCCCATTTT 57.200 33.333 0.00 0.00 0.00 1.82
1851 2216 9.786105 CATTTTCATGTATTACTATGTTGTGCA 57.214 29.630 0.00 0.00 0.00 4.57
1892 2258 0.248866 GGTGGCAACCGAACAAACTG 60.249 55.000 0.00 0.00 36.51 3.16
1898 2264 4.634004 TGGCAACCGAACAAACTGATATAG 59.366 41.667 0.00 0.00 0.00 1.31
1911 2277 8.314751 ACAAACTGATATAGTGATAGTATGGGC 58.685 37.037 0.00 0.00 40.26 5.36
1937 2303 5.104485 GGACCATCTTGTTTCTACTATGGGT 60.104 44.000 0.00 0.00 35.68 4.51
1989 2355 3.006967 GGTACTTATGTGATCCAGCGGAT 59.993 47.826 9.42 9.42 46.28 4.18
2027 2393 9.515226 TTGTCTTATATAAACCATTATCCCTGC 57.485 33.333 0.00 0.00 33.75 4.85
2028 2394 8.107095 TGTCTTATATAAACCATTATCCCTGCC 58.893 37.037 0.00 0.00 33.75 4.85
2035 2401 2.218603 CCATTATCCCTGCCGTGTTAC 58.781 52.381 0.00 0.00 0.00 2.50
2045 2412 2.735134 CTGCCGTGTTACAGTCTTAACC 59.265 50.000 0.00 0.00 31.87 2.85
2046 2413 2.102757 TGCCGTGTTACAGTCTTAACCA 59.897 45.455 0.00 0.00 31.87 3.67
2053 2420 7.118680 CCGTGTTACAGTCTTAACCACATAAAT 59.881 37.037 0.00 0.00 31.87 1.40
2093 2460 9.466497 ACATATGATTTCAATGAGTTTACAGGT 57.534 29.630 10.38 0.00 0.00 4.00
2096 2463 8.641498 ATGATTTCAATGAGTTTACAGGTTCT 57.359 30.769 0.00 0.00 0.00 3.01
2097 2464 9.739276 ATGATTTCAATGAGTTTACAGGTTCTA 57.261 29.630 0.00 0.00 0.00 2.10
2098 2465 9.739276 TGATTTCAATGAGTTTACAGGTTCTAT 57.261 29.630 0.00 0.00 0.00 1.98
2099 2466 9.994432 GATTTCAATGAGTTTACAGGTTCTATG 57.006 33.333 0.00 0.00 0.00 2.23
2100 2467 9.739276 ATTTCAATGAGTTTACAGGTTCTATGA 57.261 29.630 0.00 0.00 0.00 2.15
2101 2468 9.567776 TTTCAATGAGTTTACAGGTTCTATGAA 57.432 29.630 0.00 0.00 0.00 2.57
2102 2469 9.739276 TTCAATGAGTTTACAGGTTCTATGAAT 57.261 29.630 0.00 0.00 0.00 2.57
2103 2470 9.739276 TCAATGAGTTTACAGGTTCTATGAATT 57.261 29.630 0.00 0.00 0.00 2.17
2104 2471 9.994432 CAATGAGTTTACAGGTTCTATGAATTC 57.006 33.333 0.00 0.00 0.00 2.17
2105 2472 9.739276 AATGAGTTTACAGGTTCTATGAATTCA 57.261 29.630 11.26 11.26 0.00 2.57
2106 2473 9.739276 ATGAGTTTACAGGTTCTATGAATTCAA 57.261 29.630 13.09 1.39 0.00 2.69
2107 2474 9.567776 TGAGTTTACAGGTTCTATGAATTCAAA 57.432 29.630 13.09 0.00 0.00 2.69
2110 2477 9.406828 GTTTACAGGTTCTATGAATTCAAAACC 57.593 33.333 27.25 27.25 37.10 3.27
2111 2478 8.698973 TTACAGGTTCTATGAATTCAAAACCA 57.301 30.769 31.49 19.53 38.86 3.67
2112 2479 7.781324 ACAGGTTCTATGAATTCAAAACCAT 57.219 32.000 31.49 23.32 38.86 3.55
2113 2480 8.877864 ACAGGTTCTATGAATTCAAAACCATA 57.122 30.769 31.49 14.83 38.86 2.74
2114 2481 9.479549 ACAGGTTCTATGAATTCAAAACCATAT 57.520 29.630 31.49 21.58 38.86 1.78
2123 2490 7.319646 TGAATTCAAAACCATATTGTAGTGGC 58.680 34.615 5.45 0.00 39.13 5.01
2124 2491 4.955925 TCAAAACCATATTGTAGTGGCG 57.044 40.909 0.00 0.00 39.13 5.69
2125 2492 3.692101 TCAAAACCATATTGTAGTGGCGG 59.308 43.478 0.00 0.00 39.13 6.13
2126 2493 2.341846 AACCATATTGTAGTGGCGGG 57.658 50.000 0.00 0.00 39.13 6.13
2127 2494 1.209621 ACCATATTGTAGTGGCGGGT 58.790 50.000 0.00 0.00 39.13 5.28
2128 2495 1.134220 ACCATATTGTAGTGGCGGGTG 60.134 52.381 0.00 0.00 39.13 4.61
2129 2496 1.140052 CCATATTGTAGTGGCGGGTGA 59.860 52.381 0.00 0.00 0.00 4.02
2130 2497 2.420827 CCATATTGTAGTGGCGGGTGAA 60.421 50.000 0.00 0.00 0.00 3.18
2131 2498 3.476552 CATATTGTAGTGGCGGGTGAAT 58.523 45.455 0.00 0.00 0.00 2.57
2132 2499 2.507407 ATTGTAGTGGCGGGTGAATT 57.493 45.000 0.00 0.00 0.00 2.17
2133 2500 3.637911 ATTGTAGTGGCGGGTGAATTA 57.362 42.857 0.00 0.00 0.00 1.40
2134 2501 2.389962 TGTAGTGGCGGGTGAATTAC 57.610 50.000 0.00 0.00 0.00 1.89
2135 2502 1.624312 TGTAGTGGCGGGTGAATTACA 59.376 47.619 0.00 0.00 0.00 2.41
2136 2503 2.277084 GTAGTGGCGGGTGAATTACAG 58.723 52.381 0.00 0.00 0.00 2.74
2137 2504 0.690762 AGTGGCGGGTGAATTACAGT 59.309 50.000 0.00 0.00 0.00 3.55
2138 2505 0.802494 GTGGCGGGTGAATTACAGTG 59.198 55.000 0.00 0.00 0.00 3.66
2139 2506 0.958382 TGGCGGGTGAATTACAGTGC 60.958 55.000 0.00 0.00 0.00 4.40
2140 2507 1.654023 GGCGGGTGAATTACAGTGCC 61.654 60.000 0.00 0.00 35.28 5.01
2141 2508 1.654023 GCGGGTGAATTACAGTGCCC 61.654 60.000 0.00 0.00 0.00 5.36
2142 2509 1.366111 CGGGTGAATTACAGTGCCCG 61.366 60.000 7.59 7.59 44.91 6.13
2143 2510 1.654023 GGGTGAATTACAGTGCCCGC 61.654 60.000 0.00 0.00 0.00 6.13
2144 2511 1.654023 GGTGAATTACAGTGCCCGCC 61.654 60.000 0.00 0.00 0.00 6.13
2145 2512 0.958382 GTGAATTACAGTGCCCGCCA 60.958 55.000 0.00 0.00 0.00 5.69
2146 2513 0.958382 TGAATTACAGTGCCCGCCAC 60.958 55.000 0.00 0.00 45.01 5.01
2153 2520 3.674906 GTGCCCGCCACAACATAA 58.325 55.556 0.26 0.00 44.06 1.90
2154 2521 2.188912 GTGCCCGCCACAACATAAT 58.811 52.632 0.26 0.00 44.06 1.28
2155 2522 1.384525 GTGCCCGCCACAACATAATA 58.615 50.000 0.26 0.00 44.06 0.98
2156 2523 1.333619 GTGCCCGCCACAACATAATAG 59.666 52.381 0.26 0.00 44.06 1.73
2157 2524 0.951558 GCCCGCCACAACATAATAGG 59.048 55.000 0.00 0.00 0.00 2.57
2158 2525 1.749286 GCCCGCCACAACATAATAGGT 60.749 52.381 0.00 0.00 0.00 3.08
2159 2526 2.485835 GCCCGCCACAACATAATAGGTA 60.486 50.000 0.00 0.00 0.00 3.08
2160 2527 3.811083 CCCGCCACAACATAATAGGTAA 58.189 45.455 0.00 0.00 0.00 2.85
2161 2528 4.200874 CCCGCCACAACATAATAGGTAAA 58.799 43.478 0.00 0.00 0.00 2.01
2162 2529 4.274950 CCCGCCACAACATAATAGGTAAAG 59.725 45.833 0.00 0.00 0.00 1.85
2163 2530 5.120399 CCGCCACAACATAATAGGTAAAGA 58.880 41.667 0.00 0.00 0.00 2.52
2164 2531 5.763204 CCGCCACAACATAATAGGTAAAGAT 59.237 40.000 0.00 0.00 0.00 2.40
2165 2532 6.932400 CCGCCACAACATAATAGGTAAAGATA 59.068 38.462 0.00 0.00 0.00 1.98
2166 2533 7.442969 CCGCCACAACATAATAGGTAAAGATAA 59.557 37.037 0.00 0.00 0.00 1.75
2167 2534 8.832521 CGCCACAACATAATAGGTAAAGATAAA 58.167 33.333 0.00 0.00 0.00 1.40
2174 2541 9.930158 ACATAATAGGTAAAGATAAAAAGGGCA 57.070 29.630 0.00 0.00 0.00 5.36
2177 2544 7.745620 ATAGGTAAAGATAAAAAGGGCATCG 57.254 36.000 0.00 0.00 0.00 3.84
2178 2545 4.338400 AGGTAAAGATAAAAAGGGCATCGC 59.662 41.667 0.00 0.00 0.00 4.58
2179 2546 3.420839 AAAGATAAAAAGGGCATCGCG 57.579 42.857 0.00 0.00 0.00 5.87
2180 2547 1.308998 AGATAAAAAGGGCATCGCGG 58.691 50.000 6.13 0.00 0.00 6.46
2181 2548 0.310854 GATAAAAAGGGCATCGCGGG 59.689 55.000 6.13 0.00 0.00 6.13
2182 2549 0.106918 ATAAAAAGGGCATCGCGGGA 60.107 50.000 6.13 4.03 0.00 5.14
2183 2550 0.106918 TAAAAAGGGCATCGCGGGAT 60.107 50.000 9.50 9.50 0.00 3.85
2194 2561 4.128554 CATCGCGGGATGTTATAACAAC 57.871 45.455 28.84 18.32 44.12 3.32
2195 2562 3.530265 TCGCGGGATGTTATAACAACT 57.470 42.857 21.57 6.90 43.03 3.16
2196 2563 4.652421 TCGCGGGATGTTATAACAACTA 57.348 40.909 21.57 0.00 43.03 2.24
2197 2564 4.613944 TCGCGGGATGTTATAACAACTAG 58.386 43.478 21.57 16.28 43.03 2.57
2198 2565 4.098349 TCGCGGGATGTTATAACAACTAGT 59.902 41.667 21.57 5.39 43.03 2.57
2199 2566 4.807304 CGCGGGATGTTATAACAACTAGTT 59.193 41.667 21.57 1.12 43.03 2.24
2200 2567 5.292589 CGCGGGATGTTATAACAACTAGTTT 59.707 40.000 21.57 3.91 43.03 2.66
2201 2568 6.476380 CGCGGGATGTTATAACAACTAGTTTA 59.524 38.462 21.57 0.00 43.03 2.01
2202 2569 7.515684 CGCGGGATGTTATAACAACTAGTTTAC 60.516 40.741 21.57 4.73 43.03 2.01
2203 2570 7.493645 GCGGGATGTTATAACAACTAGTTTACT 59.506 37.037 21.57 1.70 43.03 2.24
2204 2571 9.374838 CGGGATGTTATAACAACTAGTTTACTT 57.625 33.333 21.57 1.18 43.03 2.24
2213 2580 7.933215 AACAACTAGTTTACTTCCACTTGTT 57.067 32.000 5.07 0.31 38.84 2.83
2214 2581 7.549615 ACAACTAGTTTACTTCCACTTGTTC 57.450 36.000 5.07 0.00 37.01 3.18
2215 2582 6.541278 ACAACTAGTTTACTTCCACTTGTTCC 59.459 38.462 5.07 0.00 37.01 3.62
2216 2583 5.618236 ACTAGTTTACTTCCACTTGTTCCC 58.382 41.667 0.00 0.00 0.00 3.97
2217 2584 4.790718 AGTTTACTTCCACTTGTTCCCT 57.209 40.909 0.00 0.00 0.00 4.20
2218 2585 5.125367 AGTTTACTTCCACTTGTTCCCTT 57.875 39.130 0.00 0.00 0.00 3.95
2219 2586 5.516044 AGTTTACTTCCACTTGTTCCCTTT 58.484 37.500 0.00 0.00 0.00 3.11
2220 2587 5.593095 AGTTTACTTCCACTTGTTCCCTTTC 59.407 40.000 0.00 0.00 0.00 2.62
2221 2588 3.662759 ACTTCCACTTGTTCCCTTTCA 57.337 42.857 0.00 0.00 0.00 2.69
2222 2589 3.555966 ACTTCCACTTGTTCCCTTTCAG 58.444 45.455 0.00 0.00 0.00 3.02
2223 2590 3.202151 ACTTCCACTTGTTCCCTTTCAGA 59.798 43.478 0.00 0.00 0.00 3.27
2224 2591 3.943671 TCCACTTGTTCCCTTTCAGAA 57.056 42.857 0.00 0.00 0.00 3.02
2225 2592 3.551846 TCCACTTGTTCCCTTTCAGAAC 58.448 45.455 0.00 0.00 43.20 3.01
2233 2600 4.518970 TGTTCCCTTTCAGAACAGTAATGC 59.481 41.667 2.36 0.00 46.50 3.56
2234 2601 4.640771 TCCCTTTCAGAACAGTAATGCT 57.359 40.909 0.00 0.00 0.00 3.79
2235 2602 4.579869 TCCCTTTCAGAACAGTAATGCTC 58.420 43.478 0.00 0.00 0.00 4.26
2236 2603 3.691609 CCCTTTCAGAACAGTAATGCTCC 59.308 47.826 0.00 0.00 0.00 4.70
2237 2604 3.691609 CCTTTCAGAACAGTAATGCTCCC 59.308 47.826 0.00 0.00 0.00 4.30
2238 2605 2.672961 TCAGAACAGTAATGCTCCCG 57.327 50.000 0.00 0.00 0.00 5.14
2239 2606 1.009829 CAGAACAGTAATGCTCCCGC 58.990 55.000 0.00 0.00 0.00 6.13
2240 2607 0.460284 AGAACAGTAATGCTCCCGCG 60.460 55.000 0.00 0.00 39.65 6.46
2241 2608 0.459585 GAACAGTAATGCTCCCGCGA 60.460 55.000 8.23 0.00 39.65 5.87
2242 2609 0.739813 AACAGTAATGCTCCCGCGAC 60.740 55.000 8.23 0.00 39.65 5.19
2243 2610 1.153647 CAGTAATGCTCCCGCGACA 60.154 57.895 8.23 0.00 39.65 4.35
2244 2611 1.153628 AGTAATGCTCCCGCGACAC 60.154 57.895 8.23 0.00 39.65 3.67
2245 2612 1.447140 GTAATGCTCCCGCGACACA 60.447 57.895 8.23 0.00 39.65 3.72
2246 2613 0.810031 GTAATGCTCCCGCGACACAT 60.810 55.000 8.23 2.48 39.65 3.21
2247 2614 0.747852 TAATGCTCCCGCGACACATA 59.252 50.000 8.23 0.00 39.65 2.29
2248 2615 0.810031 AATGCTCCCGCGACACATAC 60.810 55.000 8.23 0.00 39.65 2.39
2249 2616 1.676678 ATGCTCCCGCGACACATACT 61.677 55.000 8.23 0.00 39.65 2.12
2250 2617 1.589196 GCTCCCGCGACACATACTC 60.589 63.158 8.23 0.00 0.00 2.59
2251 2618 1.065928 CTCCCGCGACACATACTCC 59.934 63.158 8.23 0.00 0.00 3.85
2252 2619 1.663379 CTCCCGCGACACATACTCCA 61.663 60.000 8.23 0.00 0.00 3.86
2253 2620 1.040893 TCCCGCGACACATACTCCAT 61.041 55.000 8.23 0.00 0.00 3.41
2254 2621 0.179084 CCCGCGACACATACTCCATT 60.179 55.000 8.23 0.00 0.00 3.16
2255 2622 1.067974 CCCGCGACACATACTCCATTA 59.932 52.381 8.23 0.00 0.00 1.90
2256 2623 2.288825 CCCGCGACACATACTCCATTAT 60.289 50.000 8.23 0.00 0.00 1.28
2257 2624 3.057104 CCCGCGACACATACTCCATTATA 60.057 47.826 8.23 0.00 0.00 0.98
2258 2625 3.918591 CCGCGACACATACTCCATTATAC 59.081 47.826 8.23 0.00 0.00 1.47
2259 2626 4.321008 CCGCGACACATACTCCATTATACT 60.321 45.833 8.23 0.00 0.00 2.12
2260 2627 5.220381 CGCGACACATACTCCATTATACTT 58.780 41.667 0.00 0.00 0.00 2.24
2261 2628 6.376177 CGCGACACATACTCCATTATACTTA 58.624 40.000 0.00 0.00 0.00 2.24
2262 2629 6.523546 CGCGACACATACTCCATTATACTTAG 59.476 42.308 0.00 0.00 0.00 2.18
2263 2630 6.807230 GCGACACATACTCCATTATACTTAGG 59.193 42.308 0.00 0.00 0.00 2.69
2264 2631 6.807230 CGACACATACTCCATTATACTTAGGC 59.193 42.308 0.00 0.00 0.00 3.93
2265 2632 6.688578 ACACATACTCCATTATACTTAGGCG 58.311 40.000 0.00 0.00 0.00 5.52
2266 2633 5.577164 CACATACTCCATTATACTTAGGCGC 59.423 44.000 0.00 0.00 0.00 6.53
2267 2634 3.299340 ACTCCATTATACTTAGGCGCG 57.701 47.619 0.00 0.00 0.00 6.86
2268 2635 2.029290 ACTCCATTATACTTAGGCGCGG 60.029 50.000 8.83 0.00 0.00 6.46
2269 2636 1.274167 TCCATTATACTTAGGCGCGGG 59.726 52.381 8.83 0.00 0.00 6.13
2270 2637 1.274167 CCATTATACTTAGGCGCGGGA 59.726 52.381 8.83 0.00 0.00 5.14
2271 2638 2.334838 CATTATACTTAGGCGCGGGAC 58.665 52.381 8.83 0.00 0.00 4.46
2285 2652 2.171635 GGGACGAACATGTTCAGCC 58.828 57.895 32.06 29.18 39.46 4.85
2286 2653 0.605319 GGGACGAACATGTTCAGCCA 60.605 55.000 31.54 0.00 39.46 4.75
2287 2654 1.234821 GGACGAACATGTTCAGCCAA 58.765 50.000 32.06 0.00 39.46 4.52
2288 2655 1.197721 GGACGAACATGTTCAGCCAAG 59.802 52.381 32.06 19.60 39.46 3.61
2289 2656 2.143122 GACGAACATGTTCAGCCAAGA 58.857 47.619 32.06 0.00 39.46 3.02
2290 2657 2.744202 GACGAACATGTTCAGCCAAGAT 59.256 45.455 32.06 12.15 39.46 2.40
2291 2658 3.932710 GACGAACATGTTCAGCCAAGATA 59.067 43.478 32.06 0.00 39.46 1.98
2292 2659 3.684788 ACGAACATGTTCAGCCAAGATAC 59.315 43.478 32.06 7.30 39.46 2.24
2293 2660 3.935203 CGAACATGTTCAGCCAAGATACT 59.065 43.478 32.06 0.00 39.46 2.12
2294 2661 4.393062 CGAACATGTTCAGCCAAGATACTT 59.607 41.667 32.06 0.00 39.46 2.24
2295 2662 5.633830 AACATGTTCAGCCAAGATACTTG 57.366 39.130 4.92 4.73 0.00 3.16
2296 2663 3.441572 ACATGTTCAGCCAAGATACTTGC 59.558 43.478 0.00 2.88 0.00 4.01
2297 2664 3.423539 TGTTCAGCCAAGATACTTGCT 57.576 42.857 6.04 4.81 33.52 3.91
2298 2665 3.754965 TGTTCAGCCAAGATACTTGCTT 58.245 40.909 6.04 0.00 30.08 3.91
2299 2666 3.753272 TGTTCAGCCAAGATACTTGCTTC 59.247 43.478 6.04 0.00 30.08 3.86
2300 2667 3.701205 TCAGCCAAGATACTTGCTTCA 57.299 42.857 6.04 0.00 30.08 3.02
2301 2668 3.603532 TCAGCCAAGATACTTGCTTCAG 58.396 45.455 6.04 0.00 30.08 3.02
2302 2669 3.261643 TCAGCCAAGATACTTGCTTCAGA 59.738 43.478 6.04 0.56 30.08 3.27
2303 2670 3.622163 CAGCCAAGATACTTGCTTCAGAG 59.378 47.826 6.04 0.00 30.08 3.35
2304 2671 2.941720 GCCAAGATACTTGCTTCAGAGG 59.058 50.000 6.04 0.00 0.00 3.69
2305 2672 2.941720 CCAAGATACTTGCTTCAGAGGC 59.058 50.000 0.00 0.00 0.00 4.70
2306 2673 3.370315 CCAAGATACTTGCTTCAGAGGCT 60.370 47.826 6.04 0.00 0.00 4.58
2307 2674 3.817709 AGATACTTGCTTCAGAGGCTC 57.182 47.619 6.34 6.34 0.00 4.70
2308 2675 2.433970 AGATACTTGCTTCAGAGGCTCC 59.566 50.000 11.71 0.00 0.00 4.70
2309 2676 0.905357 TACTTGCTTCAGAGGCTCCC 59.095 55.000 11.71 0.00 0.00 4.30
2310 2677 0.839853 ACTTGCTTCAGAGGCTCCCT 60.840 55.000 11.71 0.00 36.03 4.20
2311 2678 0.392729 CTTGCTTCAGAGGCTCCCTG 60.393 60.000 11.71 3.95 31.76 4.45
2312 2679 0.837691 TTGCTTCAGAGGCTCCCTGA 60.838 55.000 11.71 6.62 38.74 3.86
2313 2680 0.837691 TGCTTCAGAGGCTCCCTGAA 60.838 55.000 11.71 14.22 45.30 3.02
2314 2681 0.326264 GCTTCAGAGGCTCCCTGAAA 59.674 55.000 16.90 3.45 46.29 2.69
2315 2682 1.064832 GCTTCAGAGGCTCCCTGAAAT 60.065 52.381 16.90 0.00 46.29 2.17
2316 2683 2.620108 GCTTCAGAGGCTCCCTGAAATT 60.620 50.000 16.90 0.00 46.29 1.82
2317 2684 2.795231 TCAGAGGCTCCCTGAAATTG 57.205 50.000 11.71 0.00 37.68 2.32
2318 2685 1.101331 CAGAGGCTCCCTGAAATTGC 58.899 55.000 11.71 0.00 31.76 3.56
2319 2686 0.998145 AGAGGCTCCCTGAAATTGCT 59.002 50.000 11.71 0.00 31.76 3.91
2320 2687 1.064832 AGAGGCTCCCTGAAATTGCTC 60.065 52.381 11.71 0.00 31.76 4.26
2321 2688 0.998145 AGGCTCCCTGAAATTGCTCT 59.002 50.000 0.00 0.00 29.57 4.09
2322 2689 1.357079 AGGCTCCCTGAAATTGCTCTT 59.643 47.619 0.00 0.00 29.57 2.85
2323 2690 2.174360 GGCTCCCTGAAATTGCTCTTT 58.826 47.619 0.00 0.00 0.00 2.52
2324 2691 2.564504 GGCTCCCTGAAATTGCTCTTTT 59.435 45.455 0.00 0.00 0.00 2.27
2325 2692 3.582780 GCTCCCTGAAATTGCTCTTTTG 58.417 45.455 0.00 0.00 0.00 2.44
2326 2693 3.582780 CTCCCTGAAATTGCTCTTTTGC 58.417 45.455 0.00 0.00 0.00 3.68
2327 2694 3.233507 TCCCTGAAATTGCTCTTTTGCT 58.766 40.909 0.00 0.00 0.00 3.91
2328 2695 3.642848 TCCCTGAAATTGCTCTTTTGCTT 59.357 39.130 0.00 0.00 0.00 3.91
2329 2696 3.992427 CCCTGAAATTGCTCTTTTGCTTC 59.008 43.478 0.00 0.00 0.00 3.86
2330 2697 4.501915 CCCTGAAATTGCTCTTTTGCTTCA 60.502 41.667 0.00 0.00 0.00 3.02
2331 2698 4.446719 CCTGAAATTGCTCTTTTGCTTCAC 59.553 41.667 0.00 0.00 0.00 3.18
2332 2699 5.008619 TGAAATTGCTCTTTTGCTTCACA 57.991 34.783 0.00 0.00 0.00 3.58
2333 2700 5.045215 TGAAATTGCTCTTTTGCTTCACAG 58.955 37.500 0.00 0.00 0.00 3.66
2334 2701 3.655276 ATTGCTCTTTTGCTTCACAGG 57.345 42.857 0.00 0.00 0.00 4.00
2335 2702 2.057137 TGCTCTTTTGCTTCACAGGT 57.943 45.000 0.00 0.00 0.00 4.00
2336 2703 1.677576 TGCTCTTTTGCTTCACAGGTG 59.322 47.619 0.00 0.00 0.00 4.00
2337 2704 1.000938 GCTCTTTTGCTTCACAGGTGG 60.001 52.381 0.00 0.00 0.00 4.61
2338 2705 2.301346 CTCTTTTGCTTCACAGGTGGT 58.699 47.619 0.00 0.00 0.00 4.16
2339 2706 2.689983 CTCTTTTGCTTCACAGGTGGTT 59.310 45.455 0.00 0.00 0.00 3.67
2340 2707 3.096092 TCTTTTGCTTCACAGGTGGTTT 58.904 40.909 0.00 0.00 0.00 3.27
2341 2708 2.957491 TTTGCTTCACAGGTGGTTTG 57.043 45.000 0.00 0.00 0.00 2.93
2342 2709 2.136298 TTGCTTCACAGGTGGTTTGA 57.864 45.000 0.00 0.00 0.00 2.69
2343 2710 2.363306 TGCTTCACAGGTGGTTTGAT 57.637 45.000 0.00 0.00 0.00 2.57
2344 2711 2.665165 TGCTTCACAGGTGGTTTGATT 58.335 42.857 0.00 0.00 0.00 2.57
2345 2712 3.030291 TGCTTCACAGGTGGTTTGATTT 58.970 40.909 0.00 0.00 0.00 2.17
2346 2713 3.450457 TGCTTCACAGGTGGTTTGATTTT 59.550 39.130 0.00 0.00 0.00 1.82
2347 2714 4.051237 GCTTCACAGGTGGTTTGATTTTC 58.949 43.478 0.00 0.00 0.00 2.29
2348 2715 4.202151 GCTTCACAGGTGGTTTGATTTTCT 60.202 41.667 0.00 0.00 0.00 2.52
2349 2716 5.009610 GCTTCACAGGTGGTTTGATTTTCTA 59.990 40.000 0.00 0.00 0.00 2.10
2350 2717 6.385649 TTCACAGGTGGTTTGATTTTCTAC 57.614 37.500 0.00 0.00 0.00 2.59
2351 2718 4.513692 TCACAGGTGGTTTGATTTTCTACG 59.486 41.667 0.00 0.00 0.00 3.51
2352 2719 3.818773 ACAGGTGGTTTGATTTTCTACGG 59.181 43.478 0.00 0.00 0.00 4.02
2353 2720 4.069304 CAGGTGGTTTGATTTTCTACGGA 58.931 43.478 0.00 0.00 0.00 4.69
2354 2721 4.154195 CAGGTGGTTTGATTTTCTACGGAG 59.846 45.833 0.00 0.00 0.00 4.63
2355 2722 4.041198 AGGTGGTTTGATTTTCTACGGAGA 59.959 41.667 0.00 0.00 0.00 3.71
2356 2723 4.758165 GGTGGTTTGATTTTCTACGGAGAA 59.242 41.667 5.81 5.81 40.04 2.87
2368 2735 7.979444 TTTCTACGGAGAAAGAATTGATTGT 57.021 32.000 19.04 0.00 44.94 2.71
2370 2737 9.667107 TTTCTACGGAGAAAGAATTGATTGTAT 57.333 29.630 19.04 0.00 44.94 2.29
2371 2738 9.667107 TTCTACGGAGAAAGAATTGATTGTATT 57.333 29.630 7.89 0.00 38.80 1.89
2372 2739 9.667107 TCTACGGAGAAAGAATTGATTGTATTT 57.333 29.630 0.00 0.00 0.00 1.40
2375 2742 9.014297 ACGGAGAAAGAATTGATTGTATTTTCT 57.986 29.630 0.00 0.00 36.45 2.52
2385 2752 9.965902 AATTGATTGTATTTTCTACTCCTGAGT 57.034 29.630 5.01 5.01 45.02 3.41
2386 2753 8.777865 TTGATTGTATTTTCTACTCCTGAGTG 57.222 34.615 10.02 1.02 42.52 3.51
2387 2754 8.134202 TGATTGTATTTTCTACTCCTGAGTGA 57.866 34.615 10.02 3.25 42.52 3.41
2388 2755 8.253810 TGATTGTATTTTCTACTCCTGAGTGAG 58.746 37.037 10.02 4.28 42.52 3.51
2389 2756 5.967088 TGTATTTTCTACTCCTGAGTGAGC 58.033 41.667 10.02 0.00 42.52 4.26
2390 2757 3.577649 TTTTCTACTCCTGAGTGAGCG 57.422 47.619 10.02 0.00 42.52 5.03
2391 2758 2.491675 TTCTACTCCTGAGTGAGCGA 57.508 50.000 10.02 0.00 42.52 4.93
2392 2759 2.491675 TCTACTCCTGAGTGAGCGAA 57.508 50.000 10.02 0.00 42.52 4.70
2393 2760 2.791655 TCTACTCCTGAGTGAGCGAAA 58.208 47.619 10.02 0.00 42.52 3.46
2394 2761 3.154710 TCTACTCCTGAGTGAGCGAAAA 58.845 45.455 10.02 0.00 42.52 2.29
2395 2762 2.910688 ACTCCTGAGTGAGCGAAAAA 57.089 45.000 0.00 0.00 40.75 1.94
2418 2785 7.778470 AAAACCGAAAAAGCAATATCAAACA 57.222 28.000 0.00 0.00 0.00 2.83
2419 2786 7.778470 AAACCGAAAAAGCAATATCAAACAA 57.222 28.000 0.00 0.00 0.00 2.83
2420 2787 7.778470 AACCGAAAAAGCAATATCAAACAAA 57.222 28.000 0.00 0.00 0.00 2.83
2421 2788 7.406799 ACCGAAAAAGCAATATCAAACAAAG 57.593 32.000 0.00 0.00 0.00 2.77
2422 2789 6.423604 ACCGAAAAAGCAATATCAAACAAAGG 59.576 34.615 0.00 0.00 0.00 3.11
2423 2790 6.298853 CGAAAAAGCAATATCAAACAAAGGC 58.701 36.000 0.00 0.00 0.00 4.35
2424 2791 6.073873 CGAAAAAGCAATATCAAACAAAGGCA 60.074 34.615 0.00 0.00 0.00 4.75
2425 2792 7.518052 CGAAAAAGCAATATCAAACAAAGGCAA 60.518 33.333 0.00 0.00 0.00 4.52
2426 2793 7.565323 AAAAGCAATATCAAACAAAGGCAAA 57.435 28.000 0.00 0.00 0.00 3.68
2427 2794 7.565323 AAAGCAATATCAAACAAAGGCAAAA 57.435 28.000 0.00 0.00 0.00 2.44
2428 2795 7.565323 AAGCAATATCAAACAAAGGCAAAAA 57.435 28.000 0.00 0.00 0.00 1.94
2447 2814 4.647424 AAAATCCTGAAACTTTGCGACA 57.353 36.364 0.00 0.00 0.00 4.35
2448 2815 4.853924 AAATCCTGAAACTTTGCGACAT 57.146 36.364 0.00 0.00 0.00 3.06
2449 2816 4.425577 AATCCTGAAACTTTGCGACATC 57.574 40.909 0.00 0.00 0.00 3.06
2450 2817 2.844946 TCCTGAAACTTTGCGACATCA 58.155 42.857 0.00 0.00 0.00 3.07
2451 2818 3.210227 TCCTGAAACTTTGCGACATCAA 58.790 40.909 0.00 0.00 0.00 2.57
2452 2819 3.629855 TCCTGAAACTTTGCGACATCAAA 59.370 39.130 0.00 0.00 35.01 2.69
2453 2820 3.730715 CCTGAAACTTTGCGACATCAAAC 59.269 43.478 0.00 0.00 32.99 2.93
2454 2821 4.350346 CTGAAACTTTGCGACATCAAACA 58.650 39.130 0.00 0.00 32.99 2.83
2455 2822 4.930963 TGAAACTTTGCGACATCAAACAT 58.069 34.783 0.00 0.00 32.99 2.71
2456 2823 4.739228 TGAAACTTTGCGACATCAAACATG 59.261 37.500 0.00 0.00 32.99 3.21
2457 2824 2.664916 ACTTTGCGACATCAAACATGC 58.335 42.857 0.00 0.00 32.99 4.06
2458 2825 2.294233 ACTTTGCGACATCAAACATGCT 59.706 40.909 0.00 0.00 32.99 3.79
2459 2826 2.617250 TTGCGACATCAAACATGCTC 57.383 45.000 0.00 0.00 0.00 4.26
2460 2827 1.521580 TGCGACATCAAACATGCTCA 58.478 45.000 0.00 0.00 0.00 4.26
2461 2828 1.878734 TGCGACATCAAACATGCTCAA 59.121 42.857 0.00 0.00 0.00 3.02
2462 2829 2.292845 TGCGACATCAAACATGCTCAAA 59.707 40.909 0.00 0.00 0.00 2.69
2463 2830 3.057386 TGCGACATCAAACATGCTCAAAT 60.057 39.130 0.00 0.00 0.00 2.32
2464 2831 3.302434 GCGACATCAAACATGCTCAAATG 59.698 43.478 0.00 0.00 0.00 2.32
2465 2832 4.478699 CGACATCAAACATGCTCAAATGT 58.521 39.130 0.00 0.00 42.62 2.71
2473 2840 5.473066 AACATGCTCAAATGTTTTAGGCT 57.527 34.783 0.00 0.00 46.19 4.58
2474 2841 5.473066 ACATGCTCAAATGTTTTAGGCTT 57.527 34.783 0.00 0.00 37.50 4.35
2475 2842 5.857268 ACATGCTCAAATGTTTTAGGCTTT 58.143 33.333 0.00 0.00 37.50 3.51
2476 2843 6.290605 ACATGCTCAAATGTTTTAGGCTTTT 58.709 32.000 0.00 0.00 37.50 2.27
2477 2844 6.203338 ACATGCTCAAATGTTTTAGGCTTTTG 59.797 34.615 0.00 0.00 37.50 2.44
2478 2845 4.511082 TGCTCAAATGTTTTAGGCTTTTGC 59.489 37.500 0.00 0.00 46.64 3.68
2493 2860 4.945090 GCTTTTGCACAATTTTATCCACG 58.055 39.130 0.00 0.00 46.58 4.94
2494 2861 4.683781 GCTTTTGCACAATTTTATCCACGA 59.316 37.500 0.00 0.00 46.58 4.35
2495 2862 5.176590 GCTTTTGCACAATTTTATCCACGAA 59.823 36.000 0.00 0.00 46.58 3.85
2496 2863 6.128580 GCTTTTGCACAATTTTATCCACGAAT 60.129 34.615 0.00 0.00 46.58 3.34
2497 2864 6.702972 TTTGCACAATTTTATCCACGAATG 57.297 33.333 0.00 0.00 0.00 2.67
2498 2865 5.635417 TGCACAATTTTATCCACGAATGA 57.365 34.783 0.00 0.00 0.00 2.57
2499 2866 5.398169 TGCACAATTTTATCCACGAATGAC 58.602 37.500 0.00 0.00 0.00 3.06
2500 2867 5.048434 TGCACAATTTTATCCACGAATGACA 60.048 36.000 0.00 0.00 0.00 3.58
2501 2868 6.035843 GCACAATTTTATCCACGAATGACAT 58.964 36.000 0.00 0.00 0.00 3.06
2502 2869 6.531240 GCACAATTTTATCCACGAATGACATT 59.469 34.615 0.00 0.00 0.00 2.71
2503 2870 7.253750 GCACAATTTTATCCACGAATGACATTC 60.254 37.037 16.80 16.80 35.94 2.67
2504 2871 7.220683 CACAATTTTATCCACGAATGACATTCC 59.779 37.037 20.03 5.34 35.89 3.01
2505 2872 7.093988 ACAATTTTATCCACGAATGACATTCCA 60.094 33.333 20.03 4.79 35.89 3.53
2506 2873 6.435430 TTTTATCCACGAATGACATTCCAG 57.565 37.500 20.03 13.21 35.89 3.86
2507 2874 2.401583 TCCACGAATGACATTCCAGG 57.598 50.000 20.03 20.05 35.89 4.45
2508 2875 1.905894 TCCACGAATGACATTCCAGGA 59.094 47.619 22.83 22.83 36.78 3.86
2509 2876 2.093500 TCCACGAATGACATTCCAGGAG 60.093 50.000 22.83 12.73 35.24 3.69
2510 2877 1.667724 CACGAATGACATTCCAGGAGC 59.332 52.381 20.03 0.00 35.89 4.70
2511 2878 1.556911 ACGAATGACATTCCAGGAGCT 59.443 47.619 20.03 0.00 35.89 4.09
2512 2879 2.208431 CGAATGACATTCCAGGAGCTC 58.792 52.381 20.03 4.71 35.89 4.09
2513 2880 2.158986 CGAATGACATTCCAGGAGCTCT 60.159 50.000 20.03 0.00 35.89 4.09
2514 2881 3.204526 GAATGACATTCCAGGAGCTCTG 58.795 50.000 16.06 9.72 43.00 3.35
2515 2882 1.942776 TGACATTCCAGGAGCTCTGA 58.057 50.000 14.64 5.38 46.18 3.27
2516 2883 2.259917 TGACATTCCAGGAGCTCTGAA 58.740 47.619 14.64 13.97 46.18 3.02
2517 2884 2.027745 TGACATTCCAGGAGCTCTGAAC 60.028 50.000 14.64 0.00 46.18 3.18
2518 2885 1.980765 ACATTCCAGGAGCTCTGAACA 59.019 47.619 14.64 0.00 46.18 3.18
2519 2886 2.027377 ACATTCCAGGAGCTCTGAACAG 60.027 50.000 14.64 12.05 46.18 3.16
2520 2887 2.015456 TTCCAGGAGCTCTGAACAGA 57.985 50.000 14.64 4.45 46.18 3.41
2521 2888 2.015456 TCCAGGAGCTCTGAACAGAA 57.985 50.000 14.64 0.00 46.18 3.02
2522 2889 2.329267 TCCAGGAGCTCTGAACAGAAA 58.671 47.619 14.64 0.00 46.18 2.52
2523 2890 2.705658 TCCAGGAGCTCTGAACAGAAAA 59.294 45.455 14.64 0.00 46.18 2.29
2524 2891 3.328931 TCCAGGAGCTCTGAACAGAAAAT 59.671 43.478 14.64 0.00 46.18 1.82
2525 2892 4.077822 CCAGGAGCTCTGAACAGAAAATT 58.922 43.478 14.64 0.00 46.18 1.82
2526 2893 5.013079 TCCAGGAGCTCTGAACAGAAAATTA 59.987 40.000 14.64 0.00 46.18 1.40
2527 2894 5.123027 CCAGGAGCTCTGAACAGAAAATTAC 59.877 44.000 14.64 0.00 46.18 1.89
2528 2895 5.702670 CAGGAGCTCTGAACAGAAAATTACA 59.297 40.000 14.64 0.00 46.18 2.41
2529 2896 6.205464 CAGGAGCTCTGAACAGAAAATTACAA 59.795 38.462 14.64 0.00 46.18 2.41
2530 2897 6.772716 AGGAGCTCTGAACAGAAAATTACAAA 59.227 34.615 14.64 0.00 36.94 2.83
2531 2898 7.285401 AGGAGCTCTGAACAGAAAATTACAAAA 59.715 33.333 14.64 0.00 36.94 2.44
2532 2899 8.084684 GGAGCTCTGAACAGAAAATTACAAAAT 58.915 33.333 14.64 0.00 36.94 1.82
2533 2900 9.468532 GAGCTCTGAACAGAAAATTACAAAATT 57.531 29.630 6.43 0.00 36.94 1.82
2541 2908 9.790389 AACAGAAAATTACAAAATTACGACACA 57.210 25.926 0.00 0.00 34.12 3.72
2542 2909 9.790389 ACAGAAAATTACAAAATTACGACACAA 57.210 25.926 0.00 0.00 34.12 3.33
2552 2919 7.690224 ACAAAATTACGACACAAATGTTTTTGC 59.310 29.630 13.25 0.00 45.01 3.68
2553 2920 6.893958 AATTACGACACAAATGTTTTTGCA 57.106 29.167 0.00 0.00 45.01 4.08
2554 2921 5.688348 TTACGACACAAATGTTTTTGCAC 57.312 34.783 0.00 0.00 45.01 4.57
2555 2922 3.843999 ACGACACAAATGTTTTTGCACT 58.156 36.364 0.00 0.00 45.01 4.40
2556 2923 4.241681 ACGACACAAATGTTTTTGCACTT 58.758 34.783 0.00 0.00 45.01 3.16
2557 2924 4.688413 ACGACACAAATGTTTTTGCACTTT 59.312 33.333 0.00 0.00 45.01 2.66
2558 2925 5.178438 ACGACACAAATGTTTTTGCACTTTT 59.822 32.000 0.00 0.00 45.01 2.27
2559 2926 6.076557 CGACACAAATGTTTTTGCACTTTTT 58.923 32.000 0.00 0.00 45.01 1.94
2560 2927 6.031210 CGACACAAATGTTTTTGCACTTTTTG 59.969 34.615 0.00 0.00 45.01 2.44
2561 2928 6.963796 ACACAAATGTTTTTGCACTTTTTGA 58.036 28.000 9.40 0.00 45.01 2.69
2562 2929 7.076983 ACACAAATGTTTTTGCACTTTTTGAG 58.923 30.769 9.40 5.67 45.01 3.02
2563 2930 6.032670 CACAAATGTTTTTGCACTTTTTGAGC 59.967 34.615 9.40 0.00 45.01 4.26
2564 2931 5.876612 AATGTTTTTGCACTTTTTGAGCA 57.123 30.435 0.00 0.00 40.35 4.26
2565 2932 4.925061 TGTTTTTGCACTTTTTGAGCAG 57.075 36.364 0.00 0.00 42.74 4.24
2566 2933 4.314121 TGTTTTTGCACTTTTTGAGCAGT 58.686 34.783 0.00 0.00 42.74 4.40
2567 2934 4.152045 TGTTTTTGCACTTTTTGAGCAGTG 59.848 37.500 0.00 0.00 42.74 3.66
2568 2935 2.582728 TTGCACTTTTTGAGCAGTGG 57.417 45.000 2.25 0.00 42.74 4.00
2569 2936 0.746063 TGCACTTTTTGAGCAGTGGG 59.254 50.000 2.25 0.00 40.77 4.61
2570 2937 0.746659 GCACTTTTTGAGCAGTGGGT 59.253 50.000 2.25 0.00 40.77 4.51
2571 2938 1.136891 GCACTTTTTGAGCAGTGGGTT 59.863 47.619 2.25 0.00 40.77 4.11
2572 2939 2.418609 GCACTTTTTGAGCAGTGGGTTT 60.419 45.455 2.25 0.00 40.77 3.27
2573 2940 3.860641 CACTTTTTGAGCAGTGGGTTTT 58.139 40.909 0.00 0.00 37.37 2.43
2574 2941 4.252878 CACTTTTTGAGCAGTGGGTTTTT 58.747 39.130 0.00 0.00 37.37 1.94
2596 2963 8.506168 TTTTTATGAGCTCCTCGAATGTTATT 57.494 30.769 12.15 0.00 32.35 1.40
2597 2964 8.506168 TTTTATGAGCTCCTCGAATGTTATTT 57.494 30.769 12.15 0.00 32.35 1.40
2598 2965 8.506168 TTTATGAGCTCCTCGAATGTTATTTT 57.494 30.769 12.15 0.00 32.35 1.82
2599 2966 5.801350 TGAGCTCCTCGAATGTTATTTTG 57.199 39.130 12.15 0.00 32.35 2.44
2600 2967 5.487433 TGAGCTCCTCGAATGTTATTTTGA 58.513 37.500 12.15 0.00 32.35 2.69
2601 2968 5.582269 TGAGCTCCTCGAATGTTATTTTGAG 59.418 40.000 12.15 0.00 37.02 3.02
2602 2969 5.734720 AGCTCCTCGAATGTTATTTTGAGA 58.265 37.500 3.53 0.00 38.79 3.27
2603 2970 6.352516 AGCTCCTCGAATGTTATTTTGAGAT 58.647 36.000 3.53 0.00 38.79 2.75
2604 2971 6.481644 AGCTCCTCGAATGTTATTTTGAGATC 59.518 38.462 3.53 0.00 38.79 2.75
2605 2972 6.258727 GCTCCTCGAATGTTATTTTGAGATCA 59.741 38.462 0.00 0.00 38.79 2.92
2606 2973 7.201644 GCTCCTCGAATGTTATTTTGAGATCAA 60.202 37.037 0.00 0.00 38.79 2.57
2607 2974 8.560355 TCCTCGAATGTTATTTTGAGATCAAA 57.440 30.769 3.91 3.91 43.36 2.69
2608 2975 9.177608 TCCTCGAATGTTATTTTGAGATCAAAT 57.822 29.630 8.72 0.00 44.30 2.32
2609 2976 9.793252 CCTCGAATGTTATTTTGAGATCAAATT 57.207 29.630 8.72 8.08 44.30 1.82
2612 2979 9.679596 CGAATGTTATTTTGAGATCAAATTTGC 57.320 29.630 13.54 0.46 44.30 3.68
2616 2983 9.761504 TGTTATTTTGAGATCAAATTTGCAAGA 57.238 25.926 13.54 7.48 44.30 3.02
2619 2986 7.481275 TTTTGAGATCAAATTTGCAAGAACC 57.519 32.000 13.54 0.12 44.30 3.62
2620 2987 6.409524 TTGAGATCAAATTTGCAAGAACCT 57.590 33.333 13.54 0.00 32.11 3.50
2621 2988 7.523293 TTGAGATCAAATTTGCAAGAACCTA 57.477 32.000 13.54 0.00 32.11 3.08
2622 2989 7.523293 TGAGATCAAATTTGCAAGAACCTAA 57.477 32.000 13.54 0.00 0.00 2.69
2623 2990 7.950512 TGAGATCAAATTTGCAAGAACCTAAA 58.049 30.769 13.54 0.00 0.00 1.85
2624 2991 8.420222 TGAGATCAAATTTGCAAGAACCTAAAA 58.580 29.630 13.54 0.00 0.00 1.52
2625 2992 9.428097 GAGATCAAATTTGCAAGAACCTAAAAT 57.572 29.630 13.54 0.00 0.00 1.82
2657 3024 8.815141 TCATGTTTGATGTTGTAAAATTCCTG 57.185 30.769 0.00 0.00 0.00 3.86
2658 3025 7.871973 TCATGTTTGATGTTGTAAAATTCCTGG 59.128 33.333 0.00 0.00 0.00 4.45
2659 3026 7.353414 TGTTTGATGTTGTAAAATTCCTGGA 57.647 32.000 0.00 0.00 0.00 3.86
2660 3027 7.961351 TGTTTGATGTTGTAAAATTCCTGGAT 58.039 30.769 0.00 0.00 0.00 3.41
2661 3028 8.428063 TGTTTGATGTTGTAAAATTCCTGGATT 58.572 29.630 0.00 0.00 0.00 3.01
2662 3029 9.271828 GTTTGATGTTGTAAAATTCCTGGATTT 57.728 29.630 0.00 0.00 0.00 2.17
2663 3030 9.844257 TTTGATGTTGTAAAATTCCTGGATTTT 57.156 25.926 10.06 10.06 40.99 1.82
2664 3031 9.844257 TTGATGTTGTAAAATTCCTGGATTTTT 57.156 25.926 24.48 24.48 39.32 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.370281 AGATAGCACCGGCATAATCG 57.630 50.000 0.00 0.00 44.61 3.34
39 40 6.753180 TCACATGAAGAGAATAGATAGCACC 58.247 40.000 0.00 0.00 0.00 5.01
100 101 3.033368 GCCACGGGCTTTTGAAATAAA 57.967 42.857 7.58 0.00 46.69 1.40
126 127 7.862873 GCTAAAATAAATGATTAGAGTGCCCAC 59.137 37.037 0.00 0.00 0.00 4.61
127 128 7.779798 AGCTAAAATAAATGATTAGAGTGCCCA 59.220 33.333 0.00 0.00 0.00 5.36
169 170 7.834881 TCCTTTCGAGATACCAGTTATACAT 57.165 36.000 0.00 0.00 0.00 2.29
221 222 5.862924 TGCAAGCTCTGTTGTAAATCTAC 57.137 39.130 0.00 0.00 0.00 2.59
232 233 2.498167 CCACTTAGTTGCAAGCTCTGT 58.502 47.619 0.00 0.88 0.00 3.41
245 246 0.400213 TGCCAGTTGACCCCACTTAG 59.600 55.000 0.00 0.00 0.00 2.18
268 269 7.457561 ACATTGGTTTTAAATACCTTGCCATT 58.542 30.769 15.82 0.00 36.60 3.16
321 343 7.693969 ATCACCAAATACAAGGAAGAAAGAG 57.306 36.000 0.00 0.00 0.00 2.85
431 453 3.102972 AGCCATCTGAGACAGTGTGTAT 58.897 45.455 0.00 0.00 32.61 2.29
433 455 1.001746 CAGCCATCTGAGACAGTGTGT 59.998 52.381 0.00 0.00 42.95 3.72
481 503 1.539929 GCGATGCAGGCTCTGATAACT 60.540 52.381 5.35 0.00 32.44 2.24
537 559 3.183775 CCTGAGACGTTTTTACGAACCAG 59.816 47.826 4.55 7.56 36.85 4.00
545 567 3.188159 ACACAGCCTGAGACGTTTTTA 57.812 42.857 0.00 0.00 0.00 1.52
546 568 2.038387 ACACAGCCTGAGACGTTTTT 57.962 45.000 0.00 0.00 0.00 1.94
582 604 8.508883 AGACGAGTATACTGTTTGAGTTCTAT 57.491 34.615 10.90 0.00 35.96 1.98
583 605 7.918536 AGACGAGTATACTGTTTGAGTTCTA 57.081 36.000 10.90 0.00 35.96 2.10
596 618 5.064962 AGTGTAGTGAGCAAGACGAGTATAC 59.935 44.000 0.00 0.00 0.00 1.47
683 729 2.823196 TACAATGTTAGCACATGCGC 57.177 45.000 0.00 0.00 43.34 6.09
783 1102 9.614792 AGAGACTTAATTACTTCAAACAACAGT 57.385 29.630 0.00 0.00 0.00 3.55
833 1152 3.763360 AGTCACTGAGTTCAGAGGATCAG 59.237 47.826 15.63 6.94 46.59 2.90
913 1232 2.125350 GCGTCCAGAGGCTTCAGG 60.125 66.667 0.20 0.20 38.98 3.86
918 1237 1.893786 CTTACTGCGTCCAGAGGCT 59.106 57.895 12.96 0.00 41.77 4.58
962 1282 8.082672 AGGCAATCACATGTCTATATATAGCA 57.917 34.615 14.03 14.56 32.38 3.49
963 1283 8.954950 AAGGCAATCACATGTCTATATATAGC 57.045 34.615 14.03 10.09 33.18 2.97
969 1289 8.046708 AGTAACAAAGGCAATCACATGTCTATA 58.953 33.333 0.00 0.00 33.18 1.31
984 1304 1.807142 GCTGTGGAGAGTAACAAAGGC 59.193 52.381 0.00 0.00 0.00 4.35
986 1306 3.126001 TGGCTGTGGAGAGTAACAAAG 57.874 47.619 0.00 0.00 0.00 2.77
993 1313 2.435372 TGTTTTTGGCTGTGGAGAGT 57.565 45.000 0.00 0.00 0.00 3.24
1010 1331 3.118531 AGGTGCTTGGGATATCTCTTGT 58.881 45.455 3.79 0.00 0.00 3.16
1054 1375 2.644418 CCGCCATGGTTGTGTGTG 59.356 61.111 14.67 0.00 0.00 3.82
1055 1376 3.294493 GCCGCCATGGTTGTGTGT 61.294 61.111 14.67 0.00 41.21 3.72
1062 1383 1.204467 CAAAATAACAGCCGCCATGGT 59.796 47.619 14.67 0.00 41.21 3.55
1063 1384 1.204467 ACAAAATAACAGCCGCCATGG 59.796 47.619 7.63 7.63 42.50 3.66
1070 1391 3.649073 GGTGTTGGACAAAATAACAGCC 58.351 45.455 0.00 0.00 43.31 4.85
1079 1400 0.549950 TAACCCGGGTGTTGGACAAA 59.450 50.000 31.05 1.12 0.00 2.83
1155 1476 2.759560 ATTTGTGCCGGCCCCATC 60.760 61.111 26.77 9.75 0.00 3.51
1165 1486 1.337703 TCACAGTGGCTTGATTTGTGC 59.662 47.619 0.00 0.00 39.10 4.57
1271 1592 1.926511 GAATGTGGCTGCCTTGTCCG 61.927 60.000 21.03 0.00 0.00 4.79
1470 1830 6.294899 CCATTATCCAAGATGTTGCCCATAAG 60.295 42.308 0.00 0.00 32.56 1.73
1544 1904 5.139727 TGAACAGGAACCAAGTCAATGAAT 58.860 37.500 0.00 0.00 0.00 2.57
1622 1982 7.967854 CGTCTTTGACCTTATTTGCATCAATAA 59.032 33.333 4.05 4.05 0.00 1.40
1663 2023 8.204836 GTCCGCTTTATTATGGAGGATACATAT 58.795 37.037 0.00 0.00 41.41 1.78
1664 2024 7.179516 TGTCCGCTTTATTATGGAGGATACATA 59.820 37.037 0.00 0.00 41.41 2.29
1665 2025 6.013725 TGTCCGCTTTATTATGGAGGATACAT 60.014 38.462 0.00 0.00 41.41 2.29
1666 2026 5.305902 TGTCCGCTTTATTATGGAGGATACA 59.694 40.000 0.00 0.00 41.41 2.29
1669 2029 4.505039 GGTGTCCGCTTTATTATGGAGGAT 60.505 45.833 0.00 0.00 32.18 3.24
1672 2032 2.800544 CGGTGTCCGCTTTATTATGGAG 59.199 50.000 0.00 0.00 41.17 3.86
1686 2046 1.512156 AATGCGAACAACCGGTGTCC 61.512 55.000 8.52 0.00 40.60 4.02
1701 2061 1.473258 TGGCTGGTACATGGAAATGC 58.527 50.000 0.00 0.00 38.20 3.56
1719 2079 3.527533 CCATTGAAAAGGGTCATGCATG 58.472 45.455 21.07 21.07 44.18 4.06
1735 2095 3.129871 ACAAATTGAAACGCCACCATTG 58.870 40.909 0.00 0.00 0.00 2.82
1744 2104 7.707774 AAATACAAGGGAACAAATTGAAACG 57.292 32.000 0.00 0.00 0.00 3.60
1812 2173 5.393866 ACATGAAAATGGGAAGTAACACCT 58.606 37.500 0.00 0.00 0.00 4.00
1830 2191 7.913674 TGTTGCACAACATAGTAATACATGA 57.086 32.000 12.02 0.00 45.42 3.07
1851 2216 9.054922 CCACCAAATGAACTTTATTGATTTGTT 57.945 29.630 9.62 0.00 33.87 2.83
1892 2258 5.009811 GTCCGGCCCATACTATCACTATATC 59.990 48.000 0.00 0.00 0.00 1.63
1898 2264 0.320697 GGTCCGGCCCATACTATCAC 59.679 60.000 0.00 0.00 0.00 3.06
1909 2275 0.322546 AGAAACAAGATGGTCCGGCC 60.323 55.000 0.00 1.41 37.90 6.13
1910 2276 2.007608 GTAGAAACAAGATGGTCCGGC 58.992 52.381 0.00 0.00 0.00 6.13
1911 2277 3.611766 AGTAGAAACAAGATGGTCCGG 57.388 47.619 0.00 0.00 0.00 5.14
1921 2287 3.054655 GCCCTGACCCATAGTAGAAACAA 60.055 47.826 0.00 0.00 0.00 2.83
1937 2303 1.332195 CCTGATGTAGATCGCCCTGA 58.668 55.000 0.00 0.00 0.00 3.86
2024 2390 2.735134 GGTTAAGACTGTAACACGGCAG 59.265 50.000 8.71 0.00 35.96 4.85
2027 2393 3.719924 TGTGGTTAAGACTGTAACACGG 58.280 45.455 8.71 0.00 35.96 4.94
2028 2394 7.410800 TTTATGTGGTTAAGACTGTAACACG 57.589 36.000 8.71 0.00 35.96 4.49
2080 2447 9.739276 TTGAATTCATAGAACCTGTAAACTCAT 57.261 29.630 9.40 0.00 0.00 2.90
2081 2448 9.567776 TTTGAATTCATAGAACCTGTAAACTCA 57.432 29.630 9.40 0.00 0.00 3.41
2084 2451 9.406828 GGTTTTGAATTCATAGAACCTGTAAAC 57.593 33.333 26.06 20.08 34.08 2.01
2085 2452 9.137459 TGGTTTTGAATTCATAGAACCTGTAAA 57.863 29.630 29.47 17.53 36.00 2.01
2086 2453 8.698973 TGGTTTTGAATTCATAGAACCTGTAA 57.301 30.769 29.47 17.76 36.00 2.41
2087 2454 8.877864 ATGGTTTTGAATTCATAGAACCTGTA 57.122 30.769 29.47 19.59 36.00 2.74
2088 2455 7.781324 ATGGTTTTGAATTCATAGAACCTGT 57.219 32.000 29.47 21.85 36.00 4.00
2097 2464 7.981225 GCCACTACAATATGGTTTTGAATTCAT 59.019 33.333 9.40 0.00 38.34 2.57
2098 2465 7.319646 GCCACTACAATATGGTTTTGAATTCA 58.680 34.615 3.38 3.38 38.34 2.57
2099 2466 6.472163 CGCCACTACAATATGGTTTTGAATTC 59.528 38.462 0.00 0.00 38.34 2.17
2100 2467 6.329496 CGCCACTACAATATGGTTTTGAATT 58.671 36.000 0.00 0.00 38.34 2.17
2101 2468 5.163561 CCGCCACTACAATATGGTTTTGAAT 60.164 40.000 0.00 0.00 38.34 2.57
2102 2469 4.156922 CCGCCACTACAATATGGTTTTGAA 59.843 41.667 0.00 0.00 38.34 2.69
2103 2470 3.692101 CCGCCACTACAATATGGTTTTGA 59.308 43.478 0.00 0.00 38.34 2.69
2104 2471 3.181491 CCCGCCACTACAATATGGTTTTG 60.181 47.826 0.00 0.00 38.34 2.44
2105 2472 3.020984 CCCGCCACTACAATATGGTTTT 58.979 45.455 0.00 0.00 38.34 2.43
2106 2473 2.025699 ACCCGCCACTACAATATGGTTT 60.026 45.455 0.00 0.00 38.34 3.27
2107 2474 1.562475 ACCCGCCACTACAATATGGTT 59.438 47.619 0.00 0.00 38.34 3.67
2108 2475 1.134220 CACCCGCCACTACAATATGGT 60.134 52.381 0.00 0.00 38.34 3.55
2109 2476 1.140052 TCACCCGCCACTACAATATGG 59.860 52.381 0.00 0.00 39.16 2.74
2110 2477 2.613026 TCACCCGCCACTACAATATG 57.387 50.000 0.00 0.00 0.00 1.78
2111 2478 3.857157 ATTCACCCGCCACTACAATAT 57.143 42.857 0.00 0.00 0.00 1.28
2112 2479 3.637911 AATTCACCCGCCACTACAATA 57.362 42.857 0.00 0.00 0.00 1.90
2113 2480 2.507407 AATTCACCCGCCACTACAAT 57.493 45.000 0.00 0.00 0.00 2.71
2114 2481 2.038689 TGTAATTCACCCGCCACTACAA 59.961 45.455 0.00 0.00 0.00 2.41
2115 2482 1.624312 TGTAATTCACCCGCCACTACA 59.376 47.619 0.00 0.00 0.00 2.74
2116 2483 2.277084 CTGTAATTCACCCGCCACTAC 58.723 52.381 0.00 0.00 0.00 2.73
2117 2484 1.903860 ACTGTAATTCACCCGCCACTA 59.096 47.619 0.00 0.00 0.00 2.74
2118 2485 0.690762 ACTGTAATTCACCCGCCACT 59.309 50.000 0.00 0.00 0.00 4.00
2119 2486 0.802494 CACTGTAATTCACCCGCCAC 59.198 55.000 0.00 0.00 0.00 5.01
2120 2487 0.958382 GCACTGTAATTCACCCGCCA 60.958 55.000 0.00 0.00 0.00 5.69
2121 2488 1.654023 GGCACTGTAATTCACCCGCC 61.654 60.000 0.00 0.00 0.00 6.13
2122 2489 1.654023 GGGCACTGTAATTCACCCGC 61.654 60.000 0.00 0.00 0.00 6.13
2123 2490 2.477880 GGGCACTGTAATTCACCCG 58.522 57.895 0.00 0.00 0.00 5.28
2124 2491 1.654023 GCGGGCACTGTAATTCACCC 61.654 60.000 0.00 0.00 36.83 4.61
2125 2492 1.654023 GGCGGGCACTGTAATTCACC 61.654 60.000 0.00 0.00 36.83 4.02
2126 2493 0.958382 TGGCGGGCACTGTAATTCAC 60.958 55.000 0.00 0.00 36.83 3.18
2127 2494 0.958382 GTGGCGGGCACTGTAATTCA 60.958 55.000 25.48 0.00 36.83 2.57
2128 2495 0.958382 TGTGGCGGGCACTGTAATTC 60.958 55.000 30.89 6.89 36.83 2.17
2129 2496 0.538516 TTGTGGCGGGCACTGTAATT 60.539 50.000 30.89 0.00 36.83 1.40
2130 2497 1.074072 TTGTGGCGGGCACTGTAAT 59.926 52.632 30.89 0.00 36.83 1.89
2131 2498 1.894756 GTTGTGGCGGGCACTGTAA 60.895 57.895 30.89 17.13 36.83 2.41
2132 2499 2.281208 GTTGTGGCGGGCACTGTA 60.281 61.111 30.89 16.16 36.83 2.74
2133 2500 2.404566 TATGTTGTGGCGGGCACTGT 62.405 55.000 30.89 17.81 36.83 3.55
2134 2501 1.240641 TTATGTTGTGGCGGGCACTG 61.241 55.000 30.89 0.00 38.10 3.66
2135 2502 0.323360 ATTATGTTGTGGCGGGCACT 60.323 50.000 30.89 16.18 0.00 4.40
2136 2503 1.333619 CTATTATGTTGTGGCGGGCAC 59.666 52.381 25.93 25.93 0.00 5.01
2137 2504 1.674359 CTATTATGTTGTGGCGGGCA 58.326 50.000 0.00 0.00 0.00 5.36
2138 2505 0.951558 CCTATTATGTTGTGGCGGGC 59.048 55.000 0.00 0.00 0.00 6.13
2139 2506 2.341846 ACCTATTATGTTGTGGCGGG 57.658 50.000 0.00 0.00 0.00 6.13
2140 2507 5.120399 TCTTTACCTATTATGTTGTGGCGG 58.880 41.667 0.00 0.00 0.00 6.13
2141 2508 6.861065 ATCTTTACCTATTATGTTGTGGCG 57.139 37.500 0.00 0.00 0.00 5.69
2148 2515 9.930158 TGCCCTTTTTATCTTTACCTATTATGT 57.070 29.630 0.00 0.00 0.00 2.29
2151 2518 9.280174 CGATGCCCTTTTTATCTTTACCTATTA 57.720 33.333 0.00 0.00 0.00 0.98
2152 2519 7.255486 GCGATGCCCTTTTTATCTTTACCTATT 60.255 37.037 0.00 0.00 0.00 1.73
2153 2520 6.206829 GCGATGCCCTTTTTATCTTTACCTAT 59.793 38.462 0.00 0.00 0.00 2.57
2154 2521 5.529800 GCGATGCCCTTTTTATCTTTACCTA 59.470 40.000 0.00 0.00 0.00 3.08
2155 2522 4.338400 GCGATGCCCTTTTTATCTTTACCT 59.662 41.667 0.00 0.00 0.00 3.08
2156 2523 4.607955 GCGATGCCCTTTTTATCTTTACC 58.392 43.478 0.00 0.00 0.00 2.85
2157 2524 4.279659 CGCGATGCCCTTTTTATCTTTAC 58.720 43.478 0.00 0.00 0.00 2.01
2158 2525 3.314080 CCGCGATGCCCTTTTTATCTTTA 59.686 43.478 8.23 0.00 0.00 1.85
2159 2526 2.099098 CCGCGATGCCCTTTTTATCTTT 59.901 45.455 8.23 0.00 0.00 2.52
2160 2527 1.676006 CCGCGATGCCCTTTTTATCTT 59.324 47.619 8.23 0.00 0.00 2.40
2161 2528 1.308998 CCGCGATGCCCTTTTTATCT 58.691 50.000 8.23 0.00 0.00 1.98
2162 2529 0.310854 CCCGCGATGCCCTTTTTATC 59.689 55.000 8.23 0.00 0.00 1.75
2163 2530 0.106918 TCCCGCGATGCCCTTTTTAT 60.107 50.000 8.23 0.00 0.00 1.40
2164 2531 0.106918 ATCCCGCGATGCCCTTTTTA 60.107 50.000 8.23 0.00 0.00 1.52
2165 2532 1.379843 ATCCCGCGATGCCCTTTTT 60.380 52.632 8.23 0.00 0.00 1.94
2166 2533 2.120909 CATCCCGCGATGCCCTTTT 61.121 57.895 8.23 0.00 39.59 2.27
2167 2534 2.516930 CATCCCGCGATGCCCTTT 60.517 61.111 8.23 0.00 39.59 3.11
2173 2540 8.632941 AACTAGTTGTTATAACATCCCGCGATG 61.633 40.741 18.69 7.02 43.24 3.84
2174 2541 4.067972 AGTTGTTATAACATCCCGCGAT 57.932 40.909 18.69 0.00 38.95 4.58
2175 2542 3.530265 AGTTGTTATAACATCCCGCGA 57.470 42.857 18.69 0.00 38.95 5.87
2176 2543 4.365723 ACTAGTTGTTATAACATCCCGCG 58.634 43.478 18.69 0.00 38.95 6.46
2177 2544 6.673154 AAACTAGTTGTTATAACATCCCGC 57.327 37.500 18.69 7.58 38.95 6.13
2178 2545 8.937634 AGTAAACTAGTTGTTATAACATCCCG 57.062 34.615 18.69 13.13 38.95 5.14
2187 2554 9.623000 AACAAGTGGAAGTAAACTAGTTGTTAT 57.377 29.630 9.34 0.00 44.33 1.89
2188 2555 9.101655 GAACAAGTGGAAGTAAACTAGTTGTTA 57.898 33.333 9.34 0.00 45.29 2.41
2189 2556 7.066645 GGAACAAGTGGAAGTAAACTAGTTGTT 59.933 37.037 9.34 13.38 46.68 2.83
2190 2557 6.541278 GGAACAAGTGGAAGTAAACTAGTTGT 59.459 38.462 9.34 2.40 41.58 3.32
2191 2558 6.017357 GGGAACAAGTGGAAGTAAACTAGTTG 60.017 42.308 9.34 0.00 36.01 3.16
2192 2559 6.060136 GGGAACAAGTGGAAGTAAACTAGTT 58.940 40.000 1.12 1.12 0.00 2.24
2193 2560 5.368816 AGGGAACAAGTGGAAGTAAACTAGT 59.631 40.000 0.00 0.00 0.00 2.57
2194 2561 5.866207 AGGGAACAAGTGGAAGTAAACTAG 58.134 41.667 0.00 0.00 0.00 2.57
2195 2562 5.899631 AGGGAACAAGTGGAAGTAAACTA 57.100 39.130 0.00 0.00 0.00 2.24
2196 2563 4.790718 AGGGAACAAGTGGAAGTAAACT 57.209 40.909 0.00 0.00 0.00 2.66
2197 2564 5.358725 TGAAAGGGAACAAGTGGAAGTAAAC 59.641 40.000 0.00 0.00 0.00 2.01
2198 2565 5.511363 TGAAAGGGAACAAGTGGAAGTAAA 58.489 37.500 0.00 0.00 0.00 2.01
2199 2566 5.104277 TCTGAAAGGGAACAAGTGGAAGTAA 60.104 40.000 0.00 0.00 0.00 2.24
2200 2567 4.410883 TCTGAAAGGGAACAAGTGGAAGTA 59.589 41.667 0.00 0.00 0.00 2.24
2201 2568 3.202151 TCTGAAAGGGAACAAGTGGAAGT 59.798 43.478 0.00 0.00 0.00 3.01
2202 2569 3.820557 TCTGAAAGGGAACAAGTGGAAG 58.179 45.455 0.00 0.00 0.00 3.46
2203 2570 3.943671 TCTGAAAGGGAACAAGTGGAA 57.056 42.857 0.00 0.00 0.00 3.53
2204 2571 3.053991 TGTTCTGAAAGGGAACAAGTGGA 60.054 43.478 6.78 0.00 46.40 4.02
2205 2572 3.287222 TGTTCTGAAAGGGAACAAGTGG 58.713 45.455 6.78 0.00 46.40 4.00
2210 2577 4.518970 GCATTACTGTTCTGAAAGGGAACA 59.481 41.667 8.61 8.61 46.95 3.18
2211 2578 4.762251 AGCATTACTGTTCTGAAAGGGAAC 59.238 41.667 0.00 0.00 42.17 3.62
2212 2579 4.985538 AGCATTACTGTTCTGAAAGGGAA 58.014 39.130 0.00 0.00 0.00 3.97
2213 2580 4.565652 GGAGCATTACTGTTCTGAAAGGGA 60.566 45.833 0.00 0.00 33.48 4.20
2214 2581 3.691609 GGAGCATTACTGTTCTGAAAGGG 59.308 47.826 0.00 0.00 33.48 3.95
2215 2582 3.691609 GGGAGCATTACTGTTCTGAAAGG 59.308 47.826 0.00 0.00 33.48 3.11
2216 2583 3.372206 CGGGAGCATTACTGTTCTGAAAG 59.628 47.826 0.00 0.00 33.48 2.62
2217 2584 3.334691 CGGGAGCATTACTGTTCTGAAA 58.665 45.455 0.00 0.00 33.48 2.69
2218 2585 2.972625 CGGGAGCATTACTGTTCTGAA 58.027 47.619 0.00 0.00 33.48 3.02
2219 2586 2.672961 CGGGAGCATTACTGTTCTGA 57.327 50.000 0.00 0.00 33.48 3.27
2233 2600 1.065928 GGAGTATGTGTCGCGGGAG 59.934 63.158 6.13 0.00 0.00 4.30
2234 2601 1.040893 ATGGAGTATGTGTCGCGGGA 61.041 55.000 6.13 0.00 0.00 5.14
2235 2602 0.179084 AATGGAGTATGTGTCGCGGG 60.179 55.000 6.13 0.00 0.00 6.13
2236 2603 2.502213 TAATGGAGTATGTGTCGCGG 57.498 50.000 6.13 0.00 0.00 6.46
2237 2604 4.795268 AGTATAATGGAGTATGTGTCGCG 58.205 43.478 0.00 0.00 0.00 5.87
2238 2605 6.807230 CCTAAGTATAATGGAGTATGTGTCGC 59.193 42.308 0.00 0.00 0.00 5.19
2239 2606 6.807230 GCCTAAGTATAATGGAGTATGTGTCG 59.193 42.308 0.00 0.00 0.00 4.35
2240 2607 6.807230 CGCCTAAGTATAATGGAGTATGTGTC 59.193 42.308 0.00 0.00 0.00 3.67
2241 2608 6.688578 CGCCTAAGTATAATGGAGTATGTGT 58.311 40.000 0.00 0.00 0.00 3.72
2242 2609 5.577164 GCGCCTAAGTATAATGGAGTATGTG 59.423 44.000 0.00 0.00 0.00 3.21
2243 2610 5.621555 CGCGCCTAAGTATAATGGAGTATGT 60.622 44.000 0.00 0.00 0.00 2.29
2244 2611 4.798907 CGCGCCTAAGTATAATGGAGTATG 59.201 45.833 0.00 0.00 0.00 2.39
2245 2612 4.142227 CCGCGCCTAAGTATAATGGAGTAT 60.142 45.833 0.00 0.00 0.00 2.12
2246 2613 3.192001 CCGCGCCTAAGTATAATGGAGTA 59.808 47.826 0.00 0.00 0.00 2.59
2247 2614 2.029290 CCGCGCCTAAGTATAATGGAGT 60.029 50.000 0.00 0.00 0.00 3.85
2248 2615 2.607187 CCGCGCCTAAGTATAATGGAG 58.393 52.381 0.00 0.00 0.00 3.86
2249 2616 1.274167 CCCGCGCCTAAGTATAATGGA 59.726 52.381 0.00 0.00 0.00 3.41
2250 2617 1.274167 TCCCGCGCCTAAGTATAATGG 59.726 52.381 0.00 0.00 0.00 3.16
2251 2618 2.334838 GTCCCGCGCCTAAGTATAATG 58.665 52.381 0.00 0.00 0.00 1.90
2252 2619 1.068055 CGTCCCGCGCCTAAGTATAAT 60.068 52.381 0.00 0.00 0.00 1.28
2253 2620 0.311790 CGTCCCGCGCCTAAGTATAA 59.688 55.000 0.00 0.00 0.00 0.98
2254 2621 0.534877 TCGTCCCGCGCCTAAGTATA 60.535 55.000 0.00 0.00 41.07 1.47
2255 2622 1.386525 TTCGTCCCGCGCCTAAGTAT 61.387 55.000 0.00 0.00 41.07 2.12
2256 2623 2.045708 TTCGTCCCGCGCCTAAGTA 61.046 57.895 0.00 0.00 41.07 2.24
2257 2624 3.376078 TTCGTCCCGCGCCTAAGT 61.376 61.111 0.00 0.00 41.07 2.24
2258 2625 2.884207 GTTCGTCCCGCGCCTAAG 60.884 66.667 0.00 0.00 41.07 2.18
2259 2626 3.009192 ATGTTCGTCCCGCGCCTAA 62.009 57.895 0.00 0.00 41.07 2.69
2260 2627 3.454573 ATGTTCGTCCCGCGCCTA 61.455 61.111 0.00 0.00 41.07 3.93
2263 2630 3.362851 GAACATGTTCGTCCCGCGC 62.363 63.158 22.09 0.00 41.07 6.86
2264 2631 1.955529 CTGAACATGTTCGTCCCGCG 61.956 60.000 28.55 0.00 42.28 6.46
2265 2632 1.787847 CTGAACATGTTCGTCCCGC 59.212 57.895 28.55 8.86 42.28 6.13
2266 2633 1.635663 GGCTGAACATGTTCGTCCCG 61.636 60.000 28.55 16.87 42.28 5.14
2267 2634 0.605319 TGGCTGAACATGTTCGTCCC 60.605 55.000 30.11 27.15 42.28 4.46
2268 2635 1.197721 CTTGGCTGAACATGTTCGTCC 59.802 52.381 28.55 28.39 42.28 4.79
2269 2636 2.143122 TCTTGGCTGAACATGTTCGTC 58.857 47.619 28.55 24.20 42.28 4.20
2270 2637 2.254546 TCTTGGCTGAACATGTTCGT 57.745 45.000 28.55 0.69 42.28 3.85
2271 2638 3.935203 AGTATCTTGGCTGAACATGTTCG 59.065 43.478 28.55 23.59 42.28 3.95
2272 2639 5.634896 CAAGTATCTTGGCTGAACATGTTC 58.365 41.667 28.10 28.10 39.91 3.18
2273 2640 4.082571 GCAAGTATCTTGGCTGAACATGTT 60.083 41.667 11.78 11.78 0.00 2.71
2274 2641 3.441572 GCAAGTATCTTGGCTGAACATGT 59.558 43.478 10.76 0.00 0.00 3.21
2275 2642 3.693085 AGCAAGTATCTTGGCTGAACATG 59.307 43.478 10.76 0.00 34.83 3.21
2276 2643 3.960571 AGCAAGTATCTTGGCTGAACAT 58.039 40.909 10.76 0.00 34.83 2.71
2277 2644 3.423539 AGCAAGTATCTTGGCTGAACA 57.576 42.857 10.76 0.00 34.83 3.18
2278 2645 3.753272 TGAAGCAAGTATCTTGGCTGAAC 59.247 43.478 10.76 5.82 36.58 3.18
2279 2646 4.005650 CTGAAGCAAGTATCTTGGCTGAA 58.994 43.478 10.76 2.24 36.58 3.02
2280 2647 3.261643 TCTGAAGCAAGTATCTTGGCTGA 59.738 43.478 10.76 2.01 36.58 4.26
2281 2648 3.603532 TCTGAAGCAAGTATCTTGGCTG 58.396 45.455 10.76 0.19 36.58 4.85
2282 2649 3.370315 CCTCTGAAGCAAGTATCTTGGCT 60.370 47.826 10.76 6.24 38.45 4.75
2283 2650 2.941720 CCTCTGAAGCAAGTATCTTGGC 59.058 50.000 10.76 4.40 0.00 4.52
2284 2651 2.941720 GCCTCTGAAGCAAGTATCTTGG 59.058 50.000 10.76 0.00 0.00 3.61
2285 2652 3.870419 GAGCCTCTGAAGCAAGTATCTTG 59.130 47.826 0.52 5.28 0.00 3.02
2286 2653 3.118445 GGAGCCTCTGAAGCAAGTATCTT 60.118 47.826 0.52 0.00 0.00 2.40
2287 2654 2.433970 GGAGCCTCTGAAGCAAGTATCT 59.566 50.000 0.52 0.00 0.00 1.98
2288 2655 2.484594 GGGAGCCTCTGAAGCAAGTATC 60.485 54.545 0.52 0.00 0.00 2.24
2289 2656 1.488393 GGGAGCCTCTGAAGCAAGTAT 59.512 52.381 0.52 0.00 0.00 2.12
2290 2657 0.905357 GGGAGCCTCTGAAGCAAGTA 59.095 55.000 0.52 0.00 0.00 2.24
2291 2658 0.839853 AGGGAGCCTCTGAAGCAAGT 60.840 55.000 0.52 0.00 0.00 3.16
2292 2659 0.392729 CAGGGAGCCTCTGAAGCAAG 60.393 60.000 0.52 0.00 34.36 4.01
2293 2660 0.837691 TCAGGGAGCCTCTGAAGCAA 60.838 55.000 0.52 0.00 38.20 3.91
2294 2661 0.837691 TTCAGGGAGCCTCTGAAGCA 60.838 55.000 11.99 0.00 43.70 3.91
2295 2662 1.986413 TTCAGGGAGCCTCTGAAGC 59.014 57.895 11.99 0.00 43.70 3.86
2297 2664 2.881403 GCAATTTCAGGGAGCCTCTGAA 60.881 50.000 11.99 11.99 45.93 3.02
2298 2665 1.340405 GCAATTTCAGGGAGCCTCTGA 60.340 52.381 1.06 1.06 39.24 3.27
2299 2666 1.101331 GCAATTTCAGGGAGCCTCTG 58.899 55.000 0.00 0.00 0.00 3.35
2300 2667 0.998145 AGCAATTTCAGGGAGCCTCT 59.002 50.000 0.00 0.00 0.00 3.69
2301 2668 1.064832 AGAGCAATTTCAGGGAGCCTC 60.065 52.381 0.00 0.00 0.00 4.70
2302 2669 0.998145 AGAGCAATTTCAGGGAGCCT 59.002 50.000 0.00 0.00 0.00 4.58
2303 2670 1.844687 AAGAGCAATTTCAGGGAGCC 58.155 50.000 0.00 0.00 0.00 4.70
2304 2671 3.582780 CAAAAGAGCAATTTCAGGGAGC 58.417 45.455 0.00 0.00 0.00 4.70
2305 2672 3.257624 AGCAAAAGAGCAATTTCAGGGAG 59.742 43.478 0.00 0.00 36.85 4.30
2306 2673 3.233507 AGCAAAAGAGCAATTTCAGGGA 58.766 40.909 0.00 0.00 36.85 4.20
2307 2674 3.672767 AGCAAAAGAGCAATTTCAGGG 57.327 42.857 0.00 0.00 36.85 4.45
2308 2675 4.446719 GTGAAGCAAAAGAGCAATTTCAGG 59.553 41.667 0.00 0.00 36.85 3.86
2309 2676 5.045215 TGTGAAGCAAAAGAGCAATTTCAG 58.955 37.500 0.00 0.00 36.85 3.02
2310 2677 5.008619 TGTGAAGCAAAAGAGCAATTTCA 57.991 34.783 0.00 0.00 36.85 2.69
2311 2678 4.446719 CCTGTGAAGCAAAAGAGCAATTTC 59.553 41.667 0.00 0.00 36.85 2.17
2312 2679 4.141869 ACCTGTGAAGCAAAAGAGCAATTT 60.142 37.500 0.00 0.00 36.85 1.82
2313 2680 3.385755 ACCTGTGAAGCAAAAGAGCAATT 59.614 39.130 0.00 0.00 36.85 2.32
2314 2681 2.961062 ACCTGTGAAGCAAAAGAGCAAT 59.039 40.909 0.00 0.00 36.85 3.56
2315 2682 2.099592 CACCTGTGAAGCAAAAGAGCAA 59.900 45.455 0.00 0.00 36.85 3.91
2316 2683 1.677576 CACCTGTGAAGCAAAAGAGCA 59.322 47.619 0.00 0.00 36.85 4.26
2317 2684 1.000938 CCACCTGTGAAGCAAAAGAGC 60.001 52.381 0.00 0.00 0.00 4.09
2318 2685 2.301346 ACCACCTGTGAAGCAAAAGAG 58.699 47.619 0.00 0.00 0.00 2.85
2319 2686 2.435372 ACCACCTGTGAAGCAAAAGA 57.565 45.000 0.00 0.00 0.00 2.52
2320 2687 3.119173 TCAAACCACCTGTGAAGCAAAAG 60.119 43.478 0.00 0.00 0.00 2.27
2321 2688 2.828520 TCAAACCACCTGTGAAGCAAAA 59.171 40.909 0.00 0.00 0.00 2.44
2322 2689 2.451490 TCAAACCACCTGTGAAGCAAA 58.549 42.857 0.00 0.00 0.00 3.68
2323 2690 2.136298 TCAAACCACCTGTGAAGCAA 57.864 45.000 0.00 0.00 0.00 3.91
2324 2691 2.363306 ATCAAACCACCTGTGAAGCA 57.637 45.000 0.00 0.00 0.00 3.91
2325 2692 3.733443 AAATCAAACCACCTGTGAAGC 57.267 42.857 0.00 0.00 0.00 3.86
2326 2693 5.520376 AGAAAATCAAACCACCTGTGAAG 57.480 39.130 0.00 0.00 0.00 3.02
2327 2694 5.008217 CGTAGAAAATCAAACCACCTGTGAA 59.992 40.000 0.00 0.00 0.00 3.18
2328 2695 4.513692 CGTAGAAAATCAAACCACCTGTGA 59.486 41.667 0.00 0.00 0.00 3.58
2329 2696 4.320202 CCGTAGAAAATCAAACCACCTGTG 60.320 45.833 0.00 0.00 0.00 3.66
2330 2697 3.818773 CCGTAGAAAATCAAACCACCTGT 59.181 43.478 0.00 0.00 0.00 4.00
2331 2698 4.069304 TCCGTAGAAAATCAAACCACCTG 58.931 43.478 0.00 0.00 0.00 4.00
2332 2699 4.041198 TCTCCGTAGAAAATCAAACCACCT 59.959 41.667 0.00 0.00 0.00 4.00
2333 2700 4.320870 TCTCCGTAGAAAATCAAACCACC 58.679 43.478 0.00 0.00 0.00 4.61
2334 2701 5.934935 TTCTCCGTAGAAAATCAAACCAC 57.065 39.130 0.00 0.00 38.81 4.16
2335 2702 6.292923 TCTTTCTCCGTAGAAAATCAAACCA 58.707 36.000 4.65 0.00 45.71 3.67
2336 2703 6.796705 TCTTTCTCCGTAGAAAATCAAACC 57.203 37.500 4.65 0.00 45.71 3.27
2337 2704 9.118236 CAATTCTTTCTCCGTAGAAAATCAAAC 57.882 33.333 4.65 0.00 45.71 2.93
2338 2705 9.062524 TCAATTCTTTCTCCGTAGAAAATCAAA 57.937 29.630 4.65 0.00 45.71 2.69
2339 2706 8.615878 TCAATTCTTTCTCCGTAGAAAATCAA 57.384 30.769 4.65 0.00 45.71 2.57
2340 2707 8.792830 ATCAATTCTTTCTCCGTAGAAAATCA 57.207 30.769 4.65 0.00 45.71 2.57
2341 2708 9.495754 CAATCAATTCTTTCTCCGTAGAAAATC 57.504 33.333 4.65 0.00 45.71 2.17
2342 2709 9.014297 ACAATCAATTCTTTCTCCGTAGAAAAT 57.986 29.630 4.65 0.00 45.71 1.82
2343 2710 8.391075 ACAATCAATTCTTTCTCCGTAGAAAA 57.609 30.769 4.65 0.00 45.71 2.29
2344 2711 7.979444 ACAATCAATTCTTTCTCCGTAGAAA 57.021 32.000 2.99 2.99 45.71 2.52
2345 2712 9.667107 AATACAATCAATTCTTTCTCCGTAGAA 57.333 29.630 0.00 0.00 40.03 2.10
2346 2713 9.667107 AAATACAATCAATTCTTTCTCCGTAGA 57.333 29.630 0.00 0.00 0.00 2.59
2349 2716 9.014297 AGAAAATACAATCAATTCTTTCTCCGT 57.986 29.630 0.00 0.00 0.00 4.69
2359 2726 9.965902 ACTCAGGAGTAGAAAATACAATCAATT 57.034 29.630 0.00 0.00 40.43 2.32
2360 2727 9.388506 CACTCAGGAGTAGAAAATACAATCAAT 57.611 33.333 0.91 0.00 40.20 2.57
2361 2728 8.593679 TCACTCAGGAGTAGAAAATACAATCAA 58.406 33.333 0.91 0.00 40.20 2.57
2362 2729 8.134202 TCACTCAGGAGTAGAAAATACAATCA 57.866 34.615 0.91 0.00 40.20 2.57
2363 2730 7.223777 GCTCACTCAGGAGTAGAAAATACAATC 59.776 40.741 0.91 0.00 40.20 2.67
2364 2731 7.044798 GCTCACTCAGGAGTAGAAAATACAAT 58.955 38.462 0.91 0.00 40.20 2.71
2365 2732 6.398918 GCTCACTCAGGAGTAGAAAATACAA 58.601 40.000 0.91 0.00 40.20 2.41
2366 2733 5.393135 CGCTCACTCAGGAGTAGAAAATACA 60.393 44.000 0.91 0.00 40.20 2.29
2367 2734 5.038033 CGCTCACTCAGGAGTAGAAAATAC 58.962 45.833 0.91 0.00 40.20 1.89
2368 2735 4.948004 TCGCTCACTCAGGAGTAGAAAATA 59.052 41.667 0.91 0.00 40.20 1.40
2369 2736 3.764434 TCGCTCACTCAGGAGTAGAAAAT 59.236 43.478 0.91 0.00 40.20 1.82
2370 2737 3.154710 TCGCTCACTCAGGAGTAGAAAA 58.845 45.455 0.91 0.00 40.20 2.29
2371 2738 2.791655 TCGCTCACTCAGGAGTAGAAA 58.208 47.619 0.91 0.00 40.20 2.52
2372 2739 2.491675 TCGCTCACTCAGGAGTAGAA 57.508 50.000 0.91 0.00 40.20 2.10
2373 2740 2.491675 TTCGCTCACTCAGGAGTAGA 57.508 50.000 0.91 2.20 40.20 2.59
2374 2741 3.577649 TTTTCGCTCACTCAGGAGTAG 57.422 47.619 0.91 2.35 40.20 2.57
2376 2743 2.910688 TTTTTCGCTCACTCAGGAGT 57.089 45.000 0.00 0.00 43.61 3.85
2393 2760 8.202745 TGTTTGATATTGCTTTTTCGGTTTTT 57.797 26.923 0.00 0.00 0.00 1.94
2394 2761 7.778470 TGTTTGATATTGCTTTTTCGGTTTT 57.222 28.000 0.00 0.00 0.00 2.43
2395 2762 7.778470 TTGTTTGATATTGCTTTTTCGGTTT 57.222 28.000 0.00 0.00 0.00 3.27
2396 2763 7.042119 CCTTTGTTTGATATTGCTTTTTCGGTT 60.042 33.333 0.00 0.00 0.00 4.44
2397 2764 6.423604 CCTTTGTTTGATATTGCTTTTTCGGT 59.576 34.615 0.00 0.00 0.00 4.69
2398 2765 6.618379 GCCTTTGTTTGATATTGCTTTTTCGG 60.618 38.462 0.00 0.00 0.00 4.30
2399 2766 6.073873 TGCCTTTGTTTGATATTGCTTTTTCG 60.074 34.615 0.00 0.00 0.00 3.46
2400 2767 7.188468 TGCCTTTGTTTGATATTGCTTTTTC 57.812 32.000 0.00 0.00 0.00 2.29
2401 2768 7.565323 TTGCCTTTGTTTGATATTGCTTTTT 57.435 28.000 0.00 0.00 0.00 1.94
2402 2769 7.565323 TTTGCCTTTGTTTGATATTGCTTTT 57.435 28.000 0.00 0.00 0.00 2.27
2403 2770 7.565323 TTTTGCCTTTGTTTGATATTGCTTT 57.435 28.000 0.00 0.00 0.00 3.51
2404 2771 7.565323 TTTTTGCCTTTGTTTGATATTGCTT 57.435 28.000 0.00 0.00 0.00 3.91
2425 2792 5.004922 TGTCGCAAAGTTTCAGGATTTTT 57.995 34.783 0.00 0.00 0.00 1.94
2426 2793 4.647424 TGTCGCAAAGTTTCAGGATTTT 57.353 36.364 0.00 0.00 0.00 1.82
2427 2794 4.278170 TGATGTCGCAAAGTTTCAGGATTT 59.722 37.500 0.00 0.00 0.00 2.17
2428 2795 3.820467 TGATGTCGCAAAGTTTCAGGATT 59.180 39.130 0.00 0.00 0.00 3.01
2429 2796 3.411446 TGATGTCGCAAAGTTTCAGGAT 58.589 40.909 0.00 0.00 0.00 3.24
2430 2797 2.844946 TGATGTCGCAAAGTTTCAGGA 58.155 42.857 0.00 0.00 0.00 3.86
2431 2798 3.624326 TTGATGTCGCAAAGTTTCAGG 57.376 42.857 0.00 0.00 0.00 3.86
2432 2799 4.350346 TGTTTGATGTCGCAAAGTTTCAG 58.650 39.130 0.00 0.00 38.33 3.02
2433 2800 4.362932 TGTTTGATGTCGCAAAGTTTCA 57.637 36.364 0.00 0.00 38.33 2.69
2434 2801 4.375305 GCATGTTTGATGTCGCAAAGTTTC 60.375 41.667 0.00 0.00 38.33 2.78
2435 2802 3.490526 GCATGTTTGATGTCGCAAAGTTT 59.509 39.130 0.00 0.00 38.33 2.66
2436 2803 3.052036 GCATGTTTGATGTCGCAAAGTT 58.948 40.909 0.00 0.00 38.33 2.66
2437 2804 2.294233 AGCATGTTTGATGTCGCAAAGT 59.706 40.909 0.00 0.00 38.33 2.66
2438 2805 2.912967 GAGCATGTTTGATGTCGCAAAG 59.087 45.455 0.00 0.00 38.33 2.77
2439 2806 2.292845 TGAGCATGTTTGATGTCGCAAA 59.707 40.909 0.00 0.00 35.54 3.68
2440 2807 1.878734 TGAGCATGTTTGATGTCGCAA 59.121 42.857 0.00 0.00 0.00 4.85
2441 2808 1.521580 TGAGCATGTTTGATGTCGCA 58.478 45.000 0.00 0.00 0.00 5.10
2442 2809 2.617250 TTGAGCATGTTTGATGTCGC 57.383 45.000 0.00 0.00 0.00 5.19
2443 2810 4.478699 ACATTTGAGCATGTTTGATGTCG 58.521 39.130 0.00 0.00 33.29 4.35
2452 2819 5.473066 AAGCCTAAAACATTTGAGCATGT 57.527 34.783 0.00 0.00 39.17 3.21
2453 2820 6.595794 CAAAAGCCTAAAACATTTGAGCATG 58.404 36.000 0.00 0.00 33.86 4.06
2454 2821 5.179929 GCAAAAGCCTAAAACATTTGAGCAT 59.820 36.000 0.00 0.00 33.86 3.79
2455 2822 4.511082 GCAAAAGCCTAAAACATTTGAGCA 59.489 37.500 0.00 0.00 33.86 4.26
2456 2823 4.511082 TGCAAAAGCCTAAAACATTTGAGC 59.489 37.500 0.00 0.00 33.86 4.26
2457 2824 5.523188 TGTGCAAAAGCCTAAAACATTTGAG 59.477 36.000 0.00 0.00 33.86 3.02
2458 2825 5.423015 TGTGCAAAAGCCTAAAACATTTGA 58.577 33.333 0.00 0.00 33.86 2.69
2459 2826 5.731599 TGTGCAAAAGCCTAAAACATTTG 57.268 34.783 0.00 0.00 34.84 2.32
2460 2827 6.940831 ATTGTGCAAAAGCCTAAAACATTT 57.059 29.167 0.00 0.00 0.00 2.32
2461 2828 6.940831 AATTGTGCAAAAGCCTAAAACATT 57.059 29.167 0.00 0.00 0.00 2.71
2462 2829 6.940831 AAATTGTGCAAAAGCCTAAAACAT 57.059 29.167 0.00 0.00 0.00 2.71
2463 2830 6.749923 AAAATTGTGCAAAAGCCTAAAACA 57.250 29.167 0.00 0.00 0.00 2.83
2464 2831 8.015087 GGATAAAATTGTGCAAAAGCCTAAAAC 58.985 33.333 0.00 0.00 0.00 2.43
2465 2832 7.716998 TGGATAAAATTGTGCAAAAGCCTAAAA 59.283 29.630 0.00 0.00 0.00 1.52
2466 2833 7.172361 GTGGATAAAATTGTGCAAAAGCCTAAA 59.828 33.333 0.00 0.00 0.00 1.85
2467 2834 6.648725 GTGGATAAAATTGTGCAAAAGCCTAA 59.351 34.615 0.00 0.00 0.00 2.69
2468 2835 6.162777 GTGGATAAAATTGTGCAAAAGCCTA 58.837 36.000 0.00 0.00 0.00 3.93
2469 2836 4.996758 GTGGATAAAATTGTGCAAAAGCCT 59.003 37.500 0.00 0.00 0.00 4.58
2470 2837 4.143137 CGTGGATAAAATTGTGCAAAAGCC 60.143 41.667 0.00 0.00 0.00 4.35
2471 2838 4.683781 TCGTGGATAAAATTGTGCAAAAGC 59.316 37.500 0.00 0.00 0.00 3.51
2472 2839 6.761731 TTCGTGGATAAAATTGTGCAAAAG 57.238 33.333 0.00 0.00 0.00 2.27
2473 2840 6.925718 TCATTCGTGGATAAAATTGTGCAAAA 59.074 30.769 0.00 0.00 0.00 2.44
2474 2841 6.364706 GTCATTCGTGGATAAAATTGTGCAAA 59.635 34.615 0.00 0.00 0.00 3.68
2475 2842 5.861251 GTCATTCGTGGATAAAATTGTGCAA 59.139 36.000 0.00 0.00 0.00 4.08
2476 2843 5.048434 TGTCATTCGTGGATAAAATTGTGCA 60.048 36.000 0.00 0.00 0.00 4.57
2477 2844 5.398169 TGTCATTCGTGGATAAAATTGTGC 58.602 37.500 0.00 0.00 0.00 4.57
2478 2845 7.220683 GGAATGTCATTCGTGGATAAAATTGTG 59.779 37.037 17.37 0.00 40.17 3.33
2479 2846 7.093988 TGGAATGTCATTCGTGGATAAAATTGT 60.094 33.333 17.37 0.00 40.17 2.71
2480 2847 7.257003 TGGAATGTCATTCGTGGATAAAATTG 58.743 34.615 17.37 0.00 40.17 2.32
2481 2848 7.403312 TGGAATGTCATTCGTGGATAAAATT 57.597 32.000 17.37 0.00 40.17 1.82
2482 2849 6.039717 CCTGGAATGTCATTCGTGGATAAAAT 59.960 38.462 21.45 0.00 40.17 1.82
2483 2850 5.356751 CCTGGAATGTCATTCGTGGATAAAA 59.643 40.000 21.45 2.13 40.17 1.52
2484 2851 4.881273 CCTGGAATGTCATTCGTGGATAAA 59.119 41.667 21.45 2.89 40.17 1.40
2485 2852 4.163268 TCCTGGAATGTCATTCGTGGATAA 59.837 41.667 23.22 10.46 40.17 1.75
2486 2853 3.709141 TCCTGGAATGTCATTCGTGGATA 59.291 43.478 23.22 10.95 40.17 2.59
2487 2854 2.505407 TCCTGGAATGTCATTCGTGGAT 59.495 45.455 23.22 0.00 40.17 3.41
2488 2855 1.905894 TCCTGGAATGTCATTCGTGGA 59.094 47.619 23.22 23.22 40.17 4.02
2489 2856 2.283298 CTCCTGGAATGTCATTCGTGG 58.717 52.381 20.60 20.60 40.17 4.94
2490 2857 1.667724 GCTCCTGGAATGTCATTCGTG 59.332 52.381 17.37 12.55 40.17 4.35
2491 2858 1.556911 AGCTCCTGGAATGTCATTCGT 59.443 47.619 17.37 0.00 40.17 3.85
2492 2859 2.158986 AGAGCTCCTGGAATGTCATTCG 60.159 50.000 17.37 6.50 40.17 3.34
2493 2860 3.118482 TCAGAGCTCCTGGAATGTCATTC 60.118 47.826 16.00 16.00 43.12 2.67
2494 2861 2.842496 TCAGAGCTCCTGGAATGTCATT 59.158 45.455 10.93 0.00 43.12 2.57
2495 2862 2.475155 TCAGAGCTCCTGGAATGTCAT 58.525 47.619 10.93 0.00 43.12 3.06
2496 2863 1.942776 TCAGAGCTCCTGGAATGTCA 58.057 50.000 10.93 0.00 43.12 3.58
2497 2864 2.027745 TGTTCAGAGCTCCTGGAATGTC 60.028 50.000 10.93 1.92 43.12 3.06
2498 2865 1.980765 TGTTCAGAGCTCCTGGAATGT 59.019 47.619 10.93 0.00 43.12 2.71
2499 2866 2.235650 TCTGTTCAGAGCTCCTGGAATG 59.764 50.000 10.93 0.47 43.12 2.67
2500 2867 2.544721 TCTGTTCAGAGCTCCTGGAAT 58.455 47.619 10.93 0.00 43.12 3.01
2501 2868 2.015456 TCTGTTCAGAGCTCCTGGAA 57.985 50.000 10.93 9.47 43.12 3.53
2502 2869 2.015456 TTCTGTTCAGAGCTCCTGGA 57.985 50.000 10.93 2.91 43.12 3.86
2503 2870 2.847327 TTTCTGTTCAGAGCTCCTGG 57.153 50.000 10.93 0.10 43.12 4.45
2504 2871 5.702670 TGTAATTTTCTGTTCAGAGCTCCTG 59.297 40.000 10.93 8.42 44.27 3.86
2505 2872 5.869579 TGTAATTTTCTGTTCAGAGCTCCT 58.130 37.500 10.93 0.00 0.00 3.69
2506 2873 6.560253 TTGTAATTTTCTGTTCAGAGCTCC 57.440 37.500 10.93 0.00 0.00 4.70
2507 2874 9.468532 AATTTTGTAATTTTCTGTTCAGAGCTC 57.531 29.630 5.27 5.27 29.68 4.09
2515 2882 9.790389 TGTGTCGTAATTTTGTAATTTTCTGTT 57.210 25.926 0.00 0.00 35.61 3.16
2516 2883 9.790389 TTGTGTCGTAATTTTGTAATTTTCTGT 57.210 25.926 0.00 0.00 35.61 3.41
2526 2893 7.690224 GCAAAAACATTTGTGTCGTAATTTTGT 59.310 29.630 12.43 0.00 37.48 2.83
2527 2894 7.689812 TGCAAAAACATTTGTGTCGTAATTTTG 59.310 29.630 0.00 0.00 37.94 2.44
2528 2895 7.690224 GTGCAAAAACATTTGTGTCGTAATTTT 59.310 29.630 0.00 0.00 34.56 1.82
2529 2896 7.064016 AGTGCAAAAACATTTGTGTCGTAATTT 59.936 29.630 0.00 0.00 34.56 1.82
2530 2897 6.533367 AGTGCAAAAACATTTGTGTCGTAATT 59.467 30.769 0.00 0.00 34.56 1.40
2531 2898 6.039616 AGTGCAAAAACATTTGTGTCGTAAT 58.960 32.000 0.00 0.00 34.56 1.89
2532 2899 5.403246 AGTGCAAAAACATTTGTGTCGTAA 58.597 33.333 0.00 0.00 34.56 3.18
2533 2900 4.987832 AGTGCAAAAACATTTGTGTCGTA 58.012 34.783 0.00 0.00 34.56 3.43
2534 2901 3.843999 AGTGCAAAAACATTTGTGTCGT 58.156 36.364 0.00 0.00 34.56 4.34
2535 2902 4.838665 AAGTGCAAAAACATTTGTGTCG 57.161 36.364 0.00 0.00 34.56 4.35
2536 2903 7.074502 TCAAAAAGTGCAAAAACATTTGTGTC 58.925 30.769 0.00 0.00 33.94 3.67
2537 2904 6.963796 TCAAAAAGTGCAAAAACATTTGTGT 58.036 28.000 0.00 0.00 33.94 3.72
2538 2905 6.032670 GCTCAAAAAGTGCAAAAACATTTGTG 59.967 34.615 0.00 0.00 36.75 3.33
2539 2906 6.085573 GCTCAAAAAGTGCAAAAACATTTGT 58.914 32.000 0.00 0.00 36.75 2.83
2540 2907 6.084925 TGCTCAAAAAGTGCAAAAACATTTG 58.915 32.000 0.00 0.00 43.16 2.32
2541 2908 6.072563 ACTGCTCAAAAAGTGCAAAAACATTT 60.073 30.769 0.00 0.00 45.15 2.32
2542 2909 5.412286 ACTGCTCAAAAAGTGCAAAAACATT 59.588 32.000 0.00 0.00 45.15 2.71
2543 2910 4.937015 ACTGCTCAAAAAGTGCAAAAACAT 59.063 33.333 0.00 0.00 45.15 2.71
2544 2911 4.152045 CACTGCTCAAAAAGTGCAAAAACA 59.848 37.500 0.00 0.00 45.15 2.83
2545 2912 4.435917 CCACTGCTCAAAAAGTGCAAAAAC 60.436 41.667 0.00 0.00 45.15 2.43
2546 2913 3.683822 CCACTGCTCAAAAAGTGCAAAAA 59.316 39.130 0.00 0.00 45.15 1.94
2547 2914 3.260740 CCACTGCTCAAAAAGTGCAAAA 58.739 40.909 0.00 0.00 45.15 2.44
2548 2915 2.418471 CCCACTGCTCAAAAAGTGCAAA 60.418 45.455 0.00 0.00 45.15 3.68
2549 2916 1.136695 CCCACTGCTCAAAAAGTGCAA 59.863 47.619 0.00 0.00 45.15 4.08
2550 2917 0.746063 CCCACTGCTCAAAAAGTGCA 59.254 50.000 0.00 0.00 43.83 4.57
2551 2918 0.746659 ACCCACTGCTCAAAAAGTGC 59.253 50.000 0.00 0.00 42.03 4.40
2552 2919 3.525268 AAACCCACTGCTCAAAAAGTG 57.475 42.857 0.00 0.00 42.83 3.16
2553 2920 4.551702 AAAAACCCACTGCTCAAAAAGT 57.448 36.364 0.00 0.00 0.00 2.66
2571 2938 8.506168 AATAACATTCGAGGAGCTCATAAAAA 57.494 30.769 17.19 4.06 0.00 1.94
2572 2939 8.506168 AAATAACATTCGAGGAGCTCATAAAA 57.494 30.769 17.19 6.71 0.00 1.52
2573 2940 8.397906 CAAAATAACATTCGAGGAGCTCATAAA 58.602 33.333 17.19 7.10 0.00 1.40
2574 2941 7.768582 TCAAAATAACATTCGAGGAGCTCATAA 59.231 33.333 17.19 0.31 0.00 1.90
2575 2942 7.272244 TCAAAATAACATTCGAGGAGCTCATA 58.728 34.615 17.19 0.00 0.00 2.15
2576 2943 6.115446 TCAAAATAACATTCGAGGAGCTCAT 58.885 36.000 17.19 8.81 0.00 2.90
2577 2944 5.487433 TCAAAATAACATTCGAGGAGCTCA 58.513 37.500 17.19 0.00 0.00 4.26
2578 2945 5.812642 TCTCAAAATAACATTCGAGGAGCTC 59.187 40.000 4.71 4.71 0.00 4.09
2579 2946 5.734720 TCTCAAAATAACATTCGAGGAGCT 58.265 37.500 0.00 0.00 0.00 4.09
2580 2947 6.258727 TGATCTCAAAATAACATTCGAGGAGC 59.741 38.462 0.00 0.00 0.00 4.70
2581 2948 7.776933 TGATCTCAAAATAACATTCGAGGAG 57.223 36.000 0.00 0.00 0.00 3.69
2582 2949 8.560355 TTTGATCTCAAAATAACATTCGAGGA 57.440 30.769 2.94 0.00 42.26 3.71
2597 2964 6.409524 AGGTTCTTGCAAATTTGATCTCAA 57.590 33.333 22.31 14.10 0.00 3.02
2598 2965 7.523293 TTAGGTTCTTGCAAATTTGATCTCA 57.477 32.000 22.31 7.22 0.00 3.27
2599 2966 8.816640 TTTTAGGTTCTTGCAAATTTGATCTC 57.183 30.769 22.31 4.54 0.00 2.75
2631 2998 9.426837 CAGGAATTTTACAACATCAAACATGAT 57.573 29.630 0.00 0.00 0.00 2.45
2632 2999 7.871973 CCAGGAATTTTACAACATCAAACATGA 59.128 33.333 0.00 0.00 0.00 3.07
2633 3000 7.871973 TCCAGGAATTTTACAACATCAAACATG 59.128 33.333 0.00 0.00 0.00 3.21
2634 3001 7.961351 TCCAGGAATTTTACAACATCAAACAT 58.039 30.769 0.00 0.00 0.00 2.71
2635 3002 7.353414 TCCAGGAATTTTACAACATCAAACA 57.647 32.000 0.00 0.00 0.00 2.83
2636 3003 8.831715 AATCCAGGAATTTTACAACATCAAAC 57.168 30.769 0.00 0.00 0.00 2.93
2637 3004 9.844257 AAAATCCAGGAATTTTACAACATCAAA 57.156 25.926 0.00 0.00 37.14 2.69
2638 3005 9.844257 AAAAATCCAGGAATTTTACAACATCAA 57.156 25.926 12.88 0.00 37.75 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.