Multiple sequence alignment - TraesCS1B01G017400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G017400 chr1B 100.000 1462 0 0 1414 2875 8395773 8394312 0.000000e+00 2700.0
1 TraesCS1B01G017400 chr1B 100.000 1108 0 0 1 1108 8397186 8396079 0.000000e+00 2047.0
2 TraesCS1B01G017400 chr1B 93.377 302 19 1 387 687 484457856 484457555 2.030000e-121 446.0
3 TraesCS1B01G017400 chr1D 87.424 1479 85 37 1454 2875 6280888 6279454 0.000000e+00 1607.0
4 TraesCS1B01G017400 chr1D 86.801 447 30 12 686 1108 6281336 6280895 3.350000e-129 472.0
5 TraesCS1B01G017400 chr1D 91.892 148 7 1 1 143 6281966 6281819 4.860000e-48 202.0
6 TraesCS1B01G017400 chr2D 93.729 303 17 2 387 687 618294475 618294777 1.210000e-123 453.0
7 TraesCS1B01G017400 chr2D 90.566 53 3 2 143 195 246254775 246254725 5.140000e-08 69.4
8 TraesCS1B01G017400 chr7B 93.421 304 17 3 387 687 218525646 218525949 5.650000e-122 448.0
9 TraesCS1B01G017400 chr5D 93.137 306 20 1 383 687 504790558 504790863 5.650000e-122 448.0
10 TraesCS1B01G017400 chr5D 90.385 52 3 2 144 195 202695072 202695023 1.850000e-07 67.6
11 TraesCS1B01G017400 chr3B 93.399 303 19 1 386 687 31124688 31124990 5.650000e-122 448.0
12 TraesCS1B01G017400 chr3D 93.645 299 17 2 390 687 156197878 156197581 2.030000e-121 446.0
13 TraesCS1B01G017400 chr7D 93.069 303 19 2 387 687 82851436 82851134 2.630000e-120 442.0
14 TraesCS1B01G017400 chr7D 93.069 303 20 1 387 688 141345336 141345638 2.630000e-120 442.0
15 TraesCS1B01G017400 chr7D 89.091 55 4 2 141 195 374621337 374621389 1.850000e-07 67.6
16 TraesCS1B01G017400 chr6A 93.092 304 17 3 387 688 36496125 36495824 2.630000e-120 442.0
17 TraesCS1B01G017400 chr6A 85.417 144 14 3 3 141 346432649 346432790 2.990000e-30 143.0
18 TraesCS1B01G017400 chr5B 82.530 332 48 8 360 687 592716080 592716405 1.690000e-72 283.0
19 TraesCS1B01G017400 chr1A 79.000 400 36 25 700 1086 7526726 7526362 2.230000e-56 230.0
20 TraesCS1B01G017400 chr6B 87.500 144 13 1 3 141 338017827 338017684 8.240000e-36 161.0
21 TraesCS1B01G017400 chrUn 90.909 55 3 2 141 195 271902137 271902085 3.970000e-09 73.1
22 TraesCS1B01G017400 chrUn 90.909 55 3 2 141 195 271918299 271918247 3.970000e-09 73.1
23 TraesCS1B01G017400 chr6D 90.909 55 3 2 141 195 220478671 220478619 3.970000e-09 73.1
24 TraesCS1B01G017400 chr6D 90.385 52 3 2 144 195 170966336 170966287 1.850000e-07 67.6
25 TraesCS1B01G017400 chr6D 90.385 52 3 2 144 195 207707342 207707293 1.850000e-07 67.6
26 TraesCS1B01G017400 chr2B 89.091 55 4 2 141 195 399370191 399370243 1.850000e-07 67.6
27 TraesCS1B01G017400 chr2A 100.000 28 0 0 1531 1558 30240508 30240481 5.000000e-03 52.8
28 TraesCS1B01G017400 chr2A 100.000 28 0 0 1531 1558 30265416 30265389 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G017400 chr1B 8394312 8397186 2874 True 2373.500000 2700 100.000000 1 2875 2 chr1B.!!$R2 2874
1 TraesCS1B01G017400 chr1D 6279454 6281966 2512 True 760.333333 1607 88.705667 1 2875 3 chr1D.!!$R1 2874

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
544 811 0.028902 CGTCGACGATGATGTGCCTA 59.971 55.0 33.35 0.0 43.02 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2206 2530 0.248336 GCGTGATCATGGACGACGTA 60.248 55.0 16.59 0.0 37.81 3.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 101 2.594536 AAGGAGAAGGATCCCCATCA 57.405 50.000 8.55 0.00 40.53 3.07
98 104 3.800924 AGGAGAAGGATCCCCATCATAG 58.199 50.000 8.55 0.00 40.53 2.23
105 111 6.389278 AGAAGGATCCCCATCATAGGATTATG 59.611 42.308 8.55 0.00 43.08 1.90
153 192 5.878406 ATCTAGATCACCTTACCTTGTGG 57.122 43.478 0.00 0.00 39.83 4.17
155 194 3.983044 AGATCACCTTACCTTGTGGTC 57.017 47.619 0.00 0.00 44.78 4.02
156 195 2.572104 AGATCACCTTACCTTGTGGTCC 59.428 50.000 0.00 0.00 44.78 4.46
160 199 3.203487 TCACCTTACCTTGTGGTCCTTTT 59.797 43.478 0.00 0.00 44.78 2.27
165 204 2.945456 ACCTTGTGGTCCTTTTCCTTC 58.055 47.619 0.00 0.00 44.78 3.46
169 208 2.294074 TGTGGTCCTTTTCCTTCGTTG 58.706 47.619 0.00 0.00 0.00 4.10
172 211 3.129813 GTGGTCCTTTTCCTTCGTTGTTT 59.870 43.478 0.00 0.00 0.00 2.83
196 235 5.554437 TGTACCTTGTGGATCTTGTGTAA 57.446 39.130 0.00 0.00 37.04 2.41
201 240 6.539173 ACCTTGTGGATCTTGTGTAAATGTA 58.461 36.000 0.00 0.00 37.04 2.29
229 496 2.268298 AGTCTGTCACGTGTTTGTGTC 58.732 47.619 16.51 2.06 40.74 3.67
232 499 0.993532 TGTCACGTGTTTGTGTCGAC 59.006 50.000 16.51 9.11 40.74 4.20
233 500 0.993532 GTCACGTGTTTGTGTCGACA 59.006 50.000 15.76 15.76 40.74 4.35
234 501 1.006391 GTCACGTGTTTGTGTCGACAG 60.006 52.381 20.73 7.88 40.74 3.51
240 507 3.123804 GTGTTTGTGTCGACAGATGTCT 58.876 45.455 20.73 0.00 42.66 3.41
268 535 3.814005 ATTTCAGCCTGATTTGCATCC 57.186 42.857 0.00 0.00 0.00 3.51
276 543 3.181469 GCCTGATTTGCATCCACATGAAT 60.181 43.478 0.00 0.00 30.57 2.57
281 548 7.407393 TGATTTGCATCCACATGAATAAGAA 57.593 32.000 0.00 0.00 30.57 2.52
284 551 8.657074 ATTTGCATCCACATGAATAAGAAATG 57.343 30.769 0.00 0.00 30.57 2.32
325 592 4.838486 GTCTGGCGCTCGGACTCG 62.838 72.222 22.82 0.19 45.85 4.18
353 620 2.117423 CCCCAACAACCTCCCACC 59.883 66.667 0.00 0.00 0.00 4.61
355 622 2.983592 CCAACAACCTCCCACCGC 60.984 66.667 0.00 0.00 0.00 5.68
356 623 2.983592 CAACAACCTCCCACCGCC 60.984 66.667 0.00 0.00 0.00 6.13
357 624 3.494254 AACAACCTCCCACCGCCA 61.494 61.111 0.00 0.00 0.00 5.69
363 630 3.000819 CTCCCACCGCCACCTGTA 61.001 66.667 0.00 0.00 0.00 2.74
364 631 3.310860 CTCCCACCGCCACCTGTAC 62.311 68.421 0.00 0.00 0.00 2.90
365 632 4.404098 CCCACCGCCACCTGTACC 62.404 72.222 0.00 0.00 0.00 3.34
366 633 3.632080 CCACCGCCACCTGTACCA 61.632 66.667 0.00 0.00 0.00 3.25
367 634 2.668632 CACCGCCACCTGTACCAT 59.331 61.111 0.00 0.00 0.00 3.55
368 635 1.002624 CACCGCCACCTGTACCATT 60.003 57.895 0.00 0.00 0.00 3.16
369 636 0.608035 CACCGCCACCTGTACCATTT 60.608 55.000 0.00 0.00 0.00 2.32
370 637 0.985760 ACCGCCACCTGTACCATTTA 59.014 50.000 0.00 0.00 0.00 1.40
371 638 1.351683 ACCGCCACCTGTACCATTTAA 59.648 47.619 0.00 0.00 0.00 1.52
372 639 2.025699 ACCGCCACCTGTACCATTTAAT 60.026 45.455 0.00 0.00 0.00 1.40
373 640 3.020984 CCGCCACCTGTACCATTTAATT 58.979 45.455 0.00 0.00 0.00 1.40
374 641 3.066203 CCGCCACCTGTACCATTTAATTC 59.934 47.826 0.00 0.00 0.00 2.17
375 642 3.692101 CGCCACCTGTACCATTTAATTCA 59.308 43.478 0.00 0.00 0.00 2.57
376 643 4.338118 CGCCACCTGTACCATTTAATTCAT 59.662 41.667 0.00 0.00 0.00 2.57
377 644 5.591099 GCCACCTGTACCATTTAATTCATG 58.409 41.667 0.00 0.00 0.00 3.07
378 645 5.591099 CCACCTGTACCATTTAATTCATGC 58.409 41.667 0.00 0.00 0.00 4.06
379 646 5.126869 CCACCTGTACCATTTAATTCATGCA 59.873 40.000 0.00 0.00 0.00 3.96
380 647 6.183360 CCACCTGTACCATTTAATTCATGCAT 60.183 38.462 0.00 0.00 0.00 3.96
381 648 6.919662 CACCTGTACCATTTAATTCATGCATC 59.080 38.462 0.00 0.00 0.00 3.91
382 649 6.144854 CCTGTACCATTTAATTCATGCATCG 58.855 40.000 0.00 0.00 0.00 3.84
383 650 6.017192 CCTGTACCATTTAATTCATGCATCGA 60.017 38.462 0.00 0.00 0.00 3.59
384 651 6.958255 TGTACCATTTAATTCATGCATCGAG 58.042 36.000 0.00 0.00 0.00 4.04
385 652 5.443185 ACCATTTAATTCATGCATCGAGG 57.557 39.130 0.00 0.00 0.00 4.63
386 653 4.279169 ACCATTTAATTCATGCATCGAGGG 59.721 41.667 0.00 0.00 0.00 4.30
387 654 3.988379 TTTAATTCATGCATCGAGGGC 57.012 42.857 0.00 1.55 0.00 5.19
388 655 1.511850 TAATTCATGCATCGAGGGCG 58.488 50.000 0.00 0.00 39.35 6.13
397 664 2.920912 TCGAGGGCGAACCAACCT 60.921 61.111 0.00 0.00 44.78 3.50
398 665 2.742372 CGAGGGCGAACCAACCTG 60.742 66.667 0.00 0.00 43.89 4.00
399 666 3.056328 GAGGGCGAACCAACCTGC 61.056 66.667 0.00 0.00 43.89 4.85
410 677 2.843545 AACCTGCGGTTGGATGGT 59.156 55.556 11.39 0.00 45.07 3.55
411 678 1.152830 AACCTGCGGTTGGATGGTT 59.847 52.632 11.39 0.00 45.07 3.67
412 679 0.402504 AACCTGCGGTTGGATGGTTA 59.597 50.000 11.39 0.00 45.07 2.85
413 680 0.035439 ACCTGCGGTTGGATGGTTAG 60.035 55.000 0.00 0.00 27.29 2.34
414 681 0.251916 CCTGCGGTTGGATGGTTAGA 59.748 55.000 0.00 0.00 0.00 2.10
415 682 1.656652 CTGCGGTTGGATGGTTAGAG 58.343 55.000 0.00 0.00 0.00 2.43
416 683 0.251916 TGCGGTTGGATGGTTAGAGG 59.748 55.000 0.00 0.00 0.00 3.69
417 684 0.463833 GCGGTTGGATGGTTAGAGGG 60.464 60.000 0.00 0.00 0.00 4.30
418 685 1.200519 CGGTTGGATGGTTAGAGGGA 58.799 55.000 0.00 0.00 0.00 4.20
419 686 1.134491 CGGTTGGATGGTTAGAGGGAC 60.134 57.143 0.00 0.00 0.00 4.46
421 688 2.092914 GGTTGGATGGTTAGAGGGACTG 60.093 54.545 0.00 0.00 41.55 3.51
422 689 2.572104 GTTGGATGGTTAGAGGGACTGT 59.428 50.000 0.00 0.00 41.55 3.55
423 690 2.187958 TGGATGGTTAGAGGGACTGTG 58.812 52.381 0.00 0.00 41.55 3.66
424 691 1.486726 GGATGGTTAGAGGGACTGTGG 59.513 57.143 0.00 0.00 41.55 4.17
425 692 2.188817 GATGGTTAGAGGGACTGTGGT 58.811 52.381 0.00 0.00 41.55 4.16
426 693 3.371965 GATGGTTAGAGGGACTGTGGTA 58.628 50.000 0.00 0.00 41.55 3.25
427 694 3.484953 TGGTTAGAGGGACTGTGGTAT 57.515 47.619 0.00 0.00 41.55 2.73
428 695 3.371965 TGGTTAGAGGGACTGTGGTATC 58.628 50.000 0.00 0.00 41.55 2.24
429 696 2.699321 GGTTAGAGGGACTGTGGTATCC 59.301 54.545 0.00 0.00 41.55 2.59
434 701 1.527370 GGACTGTGGTATCCCCAGC 59.473 63.158 0.00 0.00 46.45 4.85
435 702 1.271840 GGACTGTGGTATCCCCAGCA 61.272 60.000 0.00 0.00 46.45 4.41
436 703 0.107654 GACTGTGGTATCCCCAGCAC 60.108 60.000 0.00 0.00 46.45 4.40
438 705 4.637771 GTGGTATCCCCAGCACAC 57.362 61.111 0.88 0.00 46.45 3.82
439 706 1.077716 GTGGTATCCCCAGCACACC 60.078 63.158 0.88 0.00 46.45 4.16
440 707 1.540118 TGGTATCCCCAGCACACCA 60.540 57.895 0.00 0.00 38.72 4.17
441 708 1.224592 GGTATCCCCAGCACACCAG 59.775 63.158 0.00 0.00 0.00 4.00
442 709 1.224592 GTATCCCCAGCACACCAGG 59.775 63.158 0.00 0.00 0.00 4.45
443 710 2.000701 TATCCCCAGCACACCAGGG 61.001 63.158 0.00 0.00 42.44 4.45
444 711 2.781258 TATCCCCAGCACACCAGGGT 62.781 60.000 0.00 0.00 41.16 4.34
445 712 3.902112 CCCCAGCACACCAGGGTT 61.902 66.667 0.00 0.00 41.16 4.11
446 713 2.282462 CCCAGCACACCAGGGTTC 60.282 66.667 0.00 0.00 37.81 3.62
447 714 2.515398 CCAGCACACCAGGGTTCA 59.485 61.111 0.00 0.00 0.00 3.18
448 715 1.152777 CCAGCACACCAGGGTTCAA 60.153 57.895 0.00 0.00 0.00 2.69
449 716 1.174712 CCAGCACACCAGGGTTCAAG 61.175 60.000 0.00 0.00 0.00 3.02
450 717 0.466189 CAGCACACCAGGGTTCAAGT 60.466 55.000 0.00 0.00 0.00 3.16
451 718 0.179018 AGCACACCAGGGTTCAAGTC 60.179 55.000 0.00 0.00 0.00 3.01
452 719 0.465460 GCACACCAGGGTTCAAGTCA 60.465 55.000 0.00 0.00 0.00 3.41
453 720 1.819305 GCACACCAGGGTTCAAGTCAT 60.819 52.381 0.00 0.00 0.00 3.06
454 721 1.881973 CACACCAGGGTTCAAGTCATG 59.118 52.381 0.00 0.00 0.00 3.07
455 722 1.202927 ACACCAGGGTTCAAGTCATGG 60.203 52.381 0.00 0.00 0.00 3.66
456 723 1.149101 ACCAGGGTTCAAGTCATGGT 58.851 50.000 0.00 0.00 36.24 3.55
457 724 1.202927 ACCAGGGTTCAAGTCATGGTG 60.203 52.381 0.00 0.00 39.51 4.17
458 725 0.883833 CAGGGTTCAAGTCATGGTGC 59.116 55.000 0.00 0.00 0.00 5.01
459 726 0.773644 AGGGTTCAAGTCATGGTGCT 59.226 50.000 0.00 0.00 0.00 4.40
460 727 1.168714 GGGTTCAAGTCATGGTGCTC 58.831 55.000 0.00 0.00 0.00 4.26
461 728 0.798776 GGTTCAAGTCATGGTGCTCG 59.201 55.000 0.00 0.00 0.00 5.03
462 729 0.166814 GTTCAAGTCATGGTGCTCGC 59.833 55.000 0.00 0.00 0.00 5.03
463 730 0.250252 TTCAAGTCATGGTGCTCGCA 60.250 50.000 0.00 0.00 0.00 5.10
464 731 0.036105 TCAAGTCATGGTGCTCGCAT 60.036 50.000 0.00 0.00 0.00 4.73
465 732 0.806868 CAAGTCATGGTGCTCGCATT 59.193 50.000 0.00 0.00 0.00 3.56
466 733 1.200716 CAAGTCATGGTGCTCGCATTT 59.799 47.619 0.00 0.00 0.00 2.32
467 734 2.401583 AGTCATGGTGCTCGCATTTA 57.598 45.000 0.00 0.00 0.00 1.40
468 735 2.923121 AGTCATGGTGCTCGCATTTAT 58.077 42.857 0.00 0.00 0.00 1.40
469 736 3.282021 AGTCATGGTGCTCGCATTTATT 58.718 40.909 0.00 0.00 0.00 1.40
470 737 3.313526 AGTCATGGTGCTCGCATTTATTC 59.686 43.478 0.00 0.00 0.00 1.75
471 738 2.618241 TCATGGTGCTCGCATTTATTCC 59.382 45.455 0.00 0.00 0.00 3.01
472 739 2.418368 TGGTGCTCGCATTTATTCCT 57.582 45.000 0.00 0.00 0.00 3.36
473 740 2.016318 TGGTGCTCGCATTTATTCCTG 58.984 47.619 0.00 0.00 0.00 3.86
474 741 2.288666 GGTGCTCGCATTTATTCCTGA 58.711 47.619 0.00 0.00 0.00 3.86
475 742 2.682856 GGTGCTCGCATTTATTCCTGAA 59.317 45.455 0.00 0.00 0.00 3.02
476 743 3.316308 GGTGCTCGCATTTATTCCTGAAT 59.684 43.478 0.00 0.00 34.93 2.57
477 744 4.202050 GGTGCTCGCATTTATTCCTGAATT 60.202 41.667 0.00 0.00 32.50 2.17
478 745 5.343249 GTGCTCGCATTTATTCCTGAATTT 58.657 37.500 0.00 0.00 32.50 1.82
479 746 6.459573 GGTGCTCGCATTTATTCCTGAATTTA 60.460 38.462 0.00 0.00 32.50 1.40
480 747 7.141363 GTGCTCGCATTTATTCCTGAATTTAT 58.859 34.615 0.00 0.00 32.50 1.40
481 748 7.649306 GTGCTCGCATTTATTCCTGAATTTATT 59.351 33.333 0.00 0.00 32.50 1.40
482 749 8.196771 TGCTCGCATTTATTCCTGAATTTATTT 58.803 29.630 0.00 0.00 32.50 1.40
483 750 8.694394 GCTCGCATTTATTCCTGAATTTATTTC 58.306 33.333 0.00 0.00 34.72 2.17
484 751 9.734620 CTCGCATTTATTCCTGAATTTATTTCA 57.265 29.630 0.00 0.00 42.09 2.69
495 762 5.901552 TGAATTTATTTCAGGATTTCCGGC 58.098 37.500 0.00 0.00 39.44 6.13
496 763 4.568152 ATTTATTTCAGGATTTCCGGCG 57.432 40.909 0.00 0.00 42.08 6.46
497 764 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
498 765 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
499 766 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
500 767 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
501 768 1.819208 CAGGATTTCCGGCGATGCA 60.819 57.895 9.30 0.00 42.08 3.96
502 769 1.819632 AGGATTTCCGGCGATGCAC 60.820 57.895 9.30 0.00 42.08 4.57
503 770 2.112198 GGATTTCCGGCGATGCACA 61.112 57.895 9.30 0.00 0.00 4.57
504 771 1.447317 GGATTTCCGGCGATGCACAT 61.447 55.000 9.30 0.00 0.00 3.21
505 772 0.381801 GATTTCCGGCGATGCACATT 59.618 50.000 9.30 0.00 0.00 2.71
506 773 0.381801 ATTTCCGGCGATGCACATTC 59.618 50.000 9.30 0.00 0.00 2.67
507 774 0.957888 TTTCCGGCGATGCACATTCA 60.958 50.000 9.30 0.00 0.00 2.57
508 775 1.368345 TTCCGGCGATGCACATTCAG 61.368 55.000 9.30 0.00 0.00 3.02
509 776 2.108514 CCGGCGATGCACATTCAGT 61.109 57.895 9.30 0.00 0.00 3.41
519 786 2.393271 CACATTCAGTGGGAGGAGAC 57.607 55.000 0.00 0.00 44.69 3.36
520 787 0.898320 ACATTCAGTGGGAGGAGACG 59.102 55.000 0.00 0.00 0.00 4.18
521 788 0.898320 CATTCAGTGGGAGGAGACGT 59.102 55.000 0.00 0.00 0.00 4.34
522 789 1.276421 CATTCAGTGGGAGGAGACGTT 59.724 52.381 0.00 0.00 0.00 3.99
523 790 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
535 802 2.177531 ACGTTCCCGTCGACGATG 59.822 61.111 37.65 26.71 46.28 3.84
536 803 2.327343 ACGTTCCCGTCGACGATGA 61.327 57.895 37.65 28.41 46.28 2.92
537 804 1.063649 CGTTCCCGTCGACGATGAT 59.936 57.895 37.65 0.00 41.53 2.45
538 805 1.200474 CGTTCCCGTCGACGATGATG 61.200 60.000 37.65 22.14 41.53 3.07
539 806 0.179145 GTTCCCGTCGACGATGATGT 60.179 55.000 37.65 0.00 43.02 3.06
540 807 0.179148 TTCCCGTCGACGATGATGTG 60.179 55.000 37.65 19.12 43.02 3.21
541 808 2.230940 CCCGTCGACGATGATGTGC 61.231 63.158 37.65 0.00 43.02 4.57
542 809 2.230940 CCGTCGACGATGATGTGCC 61.231 63.158 37.65 0.00 43.02 5.01
543 810 1.226688 CGTCGACGATGATGTGCCT 60.227 57.895 33.35 0.00 43.02 4.75
544 811 0.028902 CGTCGACGATGATGTGCCTA 59.971 55.000 33.35 0.00 43.02 3.93
545 812 1.478137 GTCGACGATGATGTGCCTAC 58.522 55.000 0.00 0.00 0.00 3.18
546 813 0.028902 TCGACGATGATGTGCCTACG 59.971 55.000 0.00 0.00 0.00 3.51
547 814 0.934901 CGACGATGATGTGCCTACGG 60.935 60.000 0.00 0.00 0.00 4.02
548 815 0.102481 GACGATGATGTGCCTACGGT 59.898 55.000 0.00 0.00 0.00 4.83
549 816 0.179111 ACGATGATGTGCCTACGGTG 60.179 55.000 0.00 0.00 0.00 4.94
550 817 0.102300 CGATGATGTGCCTACGGTGA 59.898 55.000 0.00 0.00 0.00 4.02
551 818 1.571919 GATGATGTGCCTACGGTGAC 58.428 55.000 0.00 0.00 0.00 3.67
552 819 1.137086 GATGATGTGCCTACGGTGACT 59.863 52.381 0.00 0.00 0.00 3.41
553 820 0.530744 TGATGTGCCTACGGTGACTC 59.469 55.000 0.00 0.00 0.00 3.36
554 821 0.530744 GATGTGCCTACGGTGACTCA 59.469 55.000 0.00 0.00 0.00 3.41
555 822 1.137086 GATGTGCCTACGGTGACTCAT 59.863 52.381 0.00 0.00 0.00 2.90
556 823 0.973632 TGTGCCTACGGTGACTCATT 59.026 50.000 0.00 0.00 0.00 2.57
557 824 2.172679 TGTGCCTACGGTGACTCATTA 58.827 47.619 0.00 0.00 0.00 1.90
558 825 2.563620 TGTGCCTACGGTGACTCATTAA 59.436 45.455 0.00 0.00 0.00 1.40
559 826 3.196901 TGTGCCTACGGTGACTCATTAAT 59.803 43.478 0.00 0.00 0.00 1.40
560 827 4.189231 GTGCCTACGGTGACTCATTAATT 58.811 43.478 0.00 0.00 0.00 1.40
561 828 4.634443 GTGCCTACGGTGACTCATTAATTT 59.366 41.667 0.00 0.00 0.00 1.82
562 829 4.873827 TGCCTACGGTGACTCATTAATTTC 59.126 41.667 0.00 0.00 0.00 2.17
563 830 4.873827 GCCTACGGTGACTCATTAATTTCA 59.126 41.667 0.00 0.00 0.00 2.69
564 831 5.353123 GCCTACGGTGACTCATTAATTTCAA 59.647 40.000 0.00 0.00 0.00 2.69
565 832 6.456988 GCCTACGGTGACTCATTAATTTCAAG 60.457 42.308 0.00 0.00 0.00 3.02
566 833 6.816640 CCTACGGTGACTCATTAATTTCAAGA 59.183 38.462 0.00 0.00 0.00 3.02
567 834 7.495934 CCTACGGTGACTCATTAATTTCAAGAT 59.504 37.037 0.00 0.00 0.00 2.40
568 835 7.076842 ACGGTGACTCATTAATTTCAAGATG 57.923 36.000 0.00 0.00 0.00 2.90
569 836 6.878923 ACGGTGACTCATTAATTTCAAGATGA 59.121 34.615 0.00 0.00 0.00 2.92
570 837 7.554118 ACGGTGACTCATTAATTTCAAGATGAT 59.446 33.333 0.00 0.00 0.00 2.45
571 838 9.045223 CGGTGACTCATTAATTTCAAGATGATA 57.955 33.333 0.00 0.00 0.00 2.15
575 842 9.837525 GACTCATTAATTTCAAGATGATATGCC 57.162 33.333 0.00 0.00 0.00 4.40
576 843 8.509690 ACTCATTAATTTCAAGATGATATGCCG 58.490 33.333 0.00 0.00 0.00 5.69
577 844 7.819644 TCATTAATTTCAAGATGATATGCCGG 58.180 34.615 0.00 0.00 0.00 6.13
578 845 4.510038 AATTTCAAGATGATATGCCGGC 57.490 40.909 22.73 22.73 0.00 6.13
579 846 2.936919 TTCAAGATGATATGCCGGCT 57.063 45.000 29.70 15.76 0.00 5.52
580 847 2.462456 TCAAGATGATATGCCGGCTC 57.538 50.000 29.70 17.89 0.00 4.70
581 848 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
582 849 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
583 850 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
584 851 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
585 852 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
586 853 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
587 854 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
588 855 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
589 856 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
590 857 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
591 858 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
592 859 1.292223 CCGGCTCAGTCTTTCGGAA 59.708 57.895 0.00 0.00 42.94 4.30
593 860 0.737715 CCGGCTCAGTCTTTCGGAAG 60.738 60.000 0.00 0.00 42.94 3.46
594 861 0.038159 CGGCTCAGTCTTTCGGAAGT 60.038 55.000 2.72 0.00 34.41 3.01
595 862 1.433534 GGCTCAGTCTTTCGGAAGTG 58.566 55.000 2.72 0.00 34.41 3.16
596 863 0.793250 GCTCAGTCTTTCGGAAGTGC 59.207 55.000 2.72 0.00 34.41 4.40
597 864 1.606737 GCTCAGTCTTTCGGAAGTGCT 60.607 52.381 2.72 0.46 34.41 4.40
598 865 2.333014 CTCAGTCTTTCGGAAGTGCTC 58.667 52.381 2.72 0.00 34.41 4.26
599 866 1.686587 TCAGTCTTTCGGAAGTGCTCA 59.313 47.619 2.72 0.00 34.41 4.26
600 867 2.300152 TCAGTCTTTCGGAAGTGCTCAT 59.700 45.455 2.72 0.00 34.41 2.90
601 868 3.509967 TCAGTCTTTCGGAAGTGCTCATA 59.490 43.478 2.72 0.00 34.41 2.15
602 869 3.862267 CAGTCTTTCGGAAGTGCTCATAG 59.138 47.826 2.72 0.00 34.41 2.23
603 870 3.118956 AGTCTTTCGGAAGTGCTCATAGG 60.119 47.826 2.72 0.00 34.41 2.57
604 871 2.168521 TCTTTCGGAAGTGCTCATAGGG 59.831 50.000 2.72 0.00 34.41 3.53
605 872 1.860641 TTCGGAAGTGCTCATAGGGA 58.139 50.000 0.00 0.00 0.00 4.20
606 873 2.088104 TCGGAAGTGCTCATAGGGAT 57.912 50.000 0.00 0.00 0.00 3.85
607 874 3.238788 TCGGAAGTGCTCATAGGGATA 57.761 47.619 0.00 0.00 0.00 2.59
608 875 3.157881 TCGGAAGTGCTCATAGGGATAG 58.842 50.000 0.00 0.00 0.00 2.08
609 876 3.157881 CGGAAGTGCTCATAGGGATAGA 58.842 50.000 0.00 0.00 0.00 1.98
610 877 3.192422 CGGAAGTGCTCATAGGGATAGAG 59.808 52.174 0.00 0.00 0.00 2.43
611 878 4.156477 GGAAGTGCTCATAGGGATAGAGT 58.844 47.826 0.00 0.00 0.00 3.24
612 879 4.021544 GGAAGTGCTCATAGGGATAGAGTG 60.022 50.000 0.00 0.00 0.00 3.51
613 880 4.191804 AGTGCTCATAGGGATAGAGTGT 57.808 45.455 0.00 0.00 0.00 3.55
614 881 3.894427 AGTGCTCATAGGGATAGAGTGTG 59.106 47.826 0.00 0.00 0.00 3.82
615 882 2.630098 TGCTCATAGGGATAGAGTGTGC 59.370 50.000 0.00 0.00 0.00 4.57
616 883 2.352225 GCTCATAGGGATAGAGTGTGCG 60.352 54.545 0.00 0.00 0.00 5.34
617 884 2.887783 CTCATAGGGATAGAGTGTGCGT 59.112 50.000 0.00 0.00 0.00 5.24
618 885 2.623416 TCATAGGGATAGAGTGTGCGTG 59.377 50.000 0.00 0.00 0.00 5.34
619 886 2.139323 TAGGGATAGAGTGTGCGTGT 57.861 50.000 0.00 0.00 0.00 4.49
620 887 0.532573 AGGGATAGAGTGTGCGTGTG 59.467 55.000 0.00 0.00 0.00 3.82
621 888 0.246635 GGGATAGAGTGTGCGTGTGT 59.753 55.000 0.00 0.00 0.00 3.72
622 889 1.350193 GGATAGAGTGTGCGTGTGTG 58.650 55.000 0.00 0.00 0.00 3.82
623 890 0.716108 GATAGAGTGTGCGTGTGTGC 59.284 55.000 0.00 0.00 0.00 4.57
624 891 1.008875 ATAGAGTGTGCGTGTGTGCG 61.009 55.000 0.00 0.00 37.81 5.34
625 892 2.344521 TAGAGTGTGCGTGTGTGCGT 62.345 55.000 0.00 0.00 37.81 5.24
626 893 2.808958 GAGTGTGCGTGTGTGCGTT 61.809 57.895 0.00 0.00 37.81 4.84
627 894 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
628 895 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
629 896 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
630 897 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
631 898 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
632 899 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
633 900 1.011968 GCGTGTGTGCGTTCATAGGA 61.012 55.000 0.00 0.00 0.00 2.94
634 901 1.424403 CGTGTGTGCGTTCATAGGAA 58.576 50.000 0.00 0.00 0.00 3.36
635 902 1.999735 CGTGTGTGCGTTCATAGGAAT 59.000 47.619 0.00 0.00 35.05 3.01
636 903 2.222796 CGTGTGTGCGTTCATAGGAATG 60.223 50.000 4.97 4.97 41.92 2.67
637 904 3.000041 GTGTGTGCGTTCATAGGAATGA 59.000 45.455 13.33 0.00 41.62 2.57
638 905 3.062639 GTGTGTGCGTTCATAGGAATGAG 59.937 47.826 13.33 0.26 42.97 2.90
639 906 3.262420 GTGTGCGTTCATAGGAATGAGT 58.738 45.455 13.33 0.00 42.97 3.41
640 907 3.062639 GTGTGCGTTCATAGGAATGAGTG 59.937 47.826 13.33 0.00 42.97 3.51
641 908 3.262420 GTGCGTTCATAGGAATGAGTGT 58.738 45.455 13.33 0.00 42.97 3.55
642 909 4.081917 TGTGCGTTCATAGGAATGAGTGTA 60.082 41.667 13.33 0.00 42.97 2.90
643 910 5.050490 GTGCGTTCATAGGAATGAGTGTAT 58.950 41.667 13.33 0.00 42.97 2.29
644 911 5.049828 TGCGTTCATAGGAATGAGTGTATG 58.950 41.667 13.33 0.00 42.97 2.39
645 912 4.084328 GCGTTCATAGGAATGAGTGTATGC 60.084 45.833 13.33 0.00 42.97 3.14
646 913 5.049828 CGTTCATAGGAATGAGTGTATGCA 58.950 41.667 3.19 0.00 42.97 3.96
647 914 5.050769 CGTTCATAGGAATGAGTGTATGCAC 60.051 44.000 5.71 5.71 42.97 4.57
648 915 5.050769 GTTCATAGGAATGAGTGTATGCACG 60.051 44.000 8.36 0.00 42.97 5.34
649 916 7.394880 GTTCATAGGAATGAGTGTATGCACGT 61.395 42.308 8.36 0.00 42.97 4.49
650 917 9.299239 GTTCATAGGAATGAGTGTATGCACGTG 62.299 44.444 12.28 12.28 42.97 4.49
659 926 4.631133 GTGTATGCACGTGTATATGAGC 57.369 45.455 25.81 15.09 35.75 4.26
660 927 3.119628 GTGTATGCACGTGTATATGAGCG 59.880 47.826 25.81 0.00 35.75 5.03
661 928 1.139989 ATGCACGTGTATATGAGCGC 58.860 50.000 18.03 0.00 32.85 5.92
662 929 0.102300 TGCACGTGTATATGAGCGCT 59.898 50.000 11.27 11.27 32.85 5.92
663 930 1.209128 GCACGTGTATATGAGCGCTT 58.791 50.000 13.26 0.00 0.00 4.68
664 931 1.071239 GCACGTGTATATGAGCGCTTG 60.071 52.381 13.26 2.09 0.00 4.01
665 932 1.071239 CACGTGTATATGAGCGCTTGC 60.071 52.381 13.26 0.00 39.58 4.01
666 933 0.159554 CGTGTATATGAGCGCTTGCG 59.840 55.000 13.26 10.90 45.69 4.85
667 934 1.209128 GTGTATATGAGCGCTTGCGT 58.791 50.000 13.26 3.24 45.69 5.24
668 935 1.190323 GTGTATATGAGCGCTTGCGTC 59.810 52.381 13.26 12.36 45.69 5.19
669 936 1.067060 TGTATATGAGCGCTTGCGTCT 59.933 47.619 13.26 13.17 45.69 4.18
670 937 1.453524 GTATATGAGCGCTTGCGTCTG 59.546 52.381 13.26 0.00 45.69 3.51
671 938 0.179100 ATATGAGCGCTTGCGTCTGT 60.179 50.000 13.26 7.66 45.69 3.41
672 939 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74
673 940 1.078759 ATGAGCGCTTGCGTCTGTAC 61.079 55.000 13.26 0.00 45.69 2.90
674 941 1.444553 GAGCGCTTGCGTCTGTACT 60.445 57.895 13.26 3.73 45.69 2.73
675 942 1.678269 GAGCGCTTGCGTCTGTACTG 61.678 60.000 13.26 0.00 45.69 2.74
676 943 2.022129 GCGCTTGCGTCTGTACTGT 61.022 57.895 16.38 0.00 0.00 3.55
677 944 1.775344 CGCTTGCGTCTGTACTGTG 59.225 57.895 6.86 0.00 0.00 3.66
678 945 0.939577 CGCTTGCGTCTGTACTGTGT 60.940 55.000 6.86 0.00 0.00 3.72
679 946 1.217882 GCTTGCGTCTGTACTGTGTT 58.782 50.000 0.00 0.00 0.00 3.32
680 947 2.400399 GCTTGCGTCTGTACTGTGTTA 58.600 47.619 0.00 0.00 0.00 2.41
681 948 2.798283 GCTTGCGTCTGTACTGTGTTAA 59.202 45.455 0.00 0.00 0.00 2.01
682 949 3.246699 GCTTGCGTCTGTACTGTGTTAAA 59.753 43.478 0.00 0.00 0.00 1.52
683 950 4.260456 GCTTGCGTCTGTACTGTGTTAAAA 60.260 41.667 0.00 0.00 0.00 1.52
684 951 5.728344 GCTTGCGTCTGTACTGTGTTAAAAA 60.728 40.000 0.00 0.00 0.00 1.94
708 975 3.866582 CGCATGGAGGAGGTCCCC 61.867 72.222 0.00 0.00 46.31 4.81
732 999 6.314784 CAAATCCTCTTGCTACCGTTTAAAG 58.685 40.000 0.00 0.00 0.00 1.85
757 1024 7.394359 AGAAAGCAAATCAATTCCAGCTAGTAA 59.606 33.333 0.00 0.00 0.00 2.24
760 1028 7.542025 AGCAAATCAATTCCAGCTAGTAAAAG 58.458 34.615 0.00 0.00 0.00 2.27
763 1031 9.912634 CAAATCAATTCCAGCTAGTAAAAGAAA 57.087 29.630 0.00 0.00 0.00 2.52
775 1043 8.657729 AGCTAGTAAAAGAAAAAGATAAGCGAC 58.342 33.333 0.00 0.00 0.00 5.19
782 1050 2.240493 AAAGATAAGCGACGGGGATG 57.760 50.000 0.00 0.00 0.00 3.51
788 1056 4.580551 GCGACGGGGATGGGTACG 62.581 72.222 0.00 0.00 0.00 3.67
856 1133 9.125026 CCAATGCTAAAATTAGGACTTATGACT 57.875 33.333 2.61 0.00 33.85 3.41
910 1187 3.467803 CGCCTCCACCCTCTATTTAAAG 58.532 50.000 0.00 0.00 0.00 1.85
911 1188 3.744530 CGCCTCCACCCTCTATTTAAAGG 60.745 52.174 0.00 0.00 0.00 3.11
912 1189 3.458487 GCCTCCACCCTCTATTTAAAGGA 59.542 47.826 0.00 0.00 34.35 3.36
913 1190 4.079958 GCCTCCACCCTCTATTTAAAGGAA 60.080 45.833 0.00 0.00 34.35 3.36
962 1239 3.873361 CGCATAGCCAAGAAGAGATCAAA 59.127 43.478 0.00 0.00 0.00 2.69
963 1240 4.260538 CGCATAGCCAAGAAGAGATCAAAC 60.261 45.833 0.00 0.00 0.00 2.93
964 1241 4.637534 GCATAGCCAAGAAGAGATCAAACA 59.362 41.667 0.00 0.00 0.00 2.83
965 1242 5.298777 GCATAGCCAAGAAGAGATCAAACAT 59.701 40.000 0.00 0.00 0.00 2.71
1013 1308 0.600557 CTTGGCATGGCGTTTACCAA 59.399 50.000 15.27 6.65 44.65 3.67
1032 1327 1.961277 GAGGAACACAGGCGTGGTG 60.961 63.158 11.67 9.05 45.39 4.17
1076 1371 0.251474 ATGGCCACTGTGATGCTGTT 60.251 50.000 8.16 0.00 0.00 3.16
1078 1373 0.607489 GGCCACTGTGATGCTGTTCT 60.607 55.000 9.86 0.00 0.00 3.01
1484 1779 8.908786 ATATTATCTGACCGACATGTGATTTT 57.091 30.769 1.15 0.00 0.00 1.82
1494 1789 5.352293 CCGACATGTGATTTTCTTCTCATCA 59.648 40.000 1.15 0.00 29.75 3.07
1495 1790 6.037940 CCGACATGTGATTTTCTTCTCATCAT 59.962 38.462 1.15 0.00 29.75 2.45
1496 1791 7.225341 CCGACATGTGATTTTCTTCTCATCATA 59.775 37.037 1.15 0.00 29.75 2.15
1497 1792 8.771766 CGACATGTGATTTTCTTCTCATCATAT 58.228 33.333 1.15 0.00 31.10 1.78
1518 1813 8.363390 TCATATATCTGCCTCTGTAAAACTCTG 58.637 37.037 0.00 0.00 0.00 3.35
1519 1814 3.685139 TCTGCCTCTGTAAAACTCTGG 57.315 47.619 0.00 0.00 0.00 3.86
1522 1817 2.288825 TGCCTCTGTAAAACTCTGGACG 60.289 50.000 0.00 0.00 0.00 4.79
1537 1832 3.572255 TCTGGACGCAAGCCTTTTAAAAT 59.428 39.130 0.09 0.00 45.62 1.82
1613 1933 7.890515 TCCAACAAGATATTGTTTGTATGCAA 58.109 30.769 15.55 0.00 42.69 4.08
1625 1945 2.083774 TGTATGCAAGTACCAGCAAGC 58.916 47.619 13.04 9.61 44.88 4.01
1631 1951 2.098117 GCAAGTACCAGCAAGCTATTGG 59.902 50.000 8.97 8.97 36.88 3.16
1659 1979 5.661458 AGTACCAATCTACAAACTGATCCG 58.339 41.667 0.00 0.00 0.00 4.18
1766 2086 3.368822 TGCAAGGAAGCATGTGCC 58.631 55.556 0.57 0.00 43.38 5.01
1772 2092 2.531522 AGGAAGCATGTGCCAAAAAC 57.468 45.000 0.57 0.00 43.38 2.43
1792 2112 2.173996 ACAATACCCCAAATAGACCCCG 59.826 50.000 0.00 0.00 0.00 5.73
1823 2143 2.726989 CGTGACTGATGAATGCTGTTGC 60.727 50.000 0.00 0.00 40.20 4.17
1877 2197 2.120232 GTCGTCCGTCATGCTTGATAG 58.880 52.381 5.49 3.68 33.56 2.08
1903 2223 5.841957 AGCCTTGATTCATTATTGGACAC 57.158 39.130 0.00 0.00 0.00 3.67
1924 2244 1.004745 ACATTGTGGGGTGATCAGGAC 59.995 52.381 0.00 0.00 0.00 3.85
1931 2251 2.439135 TGGGGTGATCAGGACATGTATG 59.561 50.000 0.00 0.62 0.00 2.39
1933 2253 3.646162 GGGGTGATCAGGACATGTATGTA 59.354 47.826 0.00 0.00 41.95 2.29
1934 2254 4.287067 GGGGTGATCAGGACATGTATGTAT 59.713 45.833 0.00 0.00 41.95 2.29
1975 2299 7.798801 TCAGCAATTGCATTTTGAATAACAAG 58.201 30.769 30.89 1.92 45.16 3.16
1991 2315 9.352784 TGAATAACAAGAAAACACAAAAGAGTG 57.647 29.630 0.00 0.00 44.93 3.51
1992 2316 7.755582 ATAACAAGAAAACACAAAAGAGTGC 57.244 32.000 0.00 0.00 43.23 4.40
1999 2323 6.477688 AGAAAACACAAAAGAGTGCATCATTG 59.522 34.615 0.00 2.01 43.23 2.82
2016 2340 6.746364 GCATCATTGTTCTGAGTTTGAGATTC 59.254 38.462 0.00 0.00 0.00 2.52
2024 2348 5.164233 TCTGAGTTTGAGATTCGTCATGTC 58.836 41.667 0.00 0.00 0.00 3.06
2031 2355 2.604914 GAGATTCGTCATGTCGCAATGT 59.395 45.455 7.51 7.06 0.00 2.71
2042 2366 6.254804 GTCATGTCGCAATGTACTTGTACATA 59.745 38.462 21.93 9.60 39.49 2.29
2053 2377 5.763698 TGTACTTGTACATATCTCTCTCCCG 59.236 44.000 9.28 0.00 0.00 5.14
2055 2379 2.515854 TGTACATATCTCTCTCCCGGC 58.484 52.381 0.00 0.00 0.00 6.13
2087 2411 2.101082 GGTCTCTCGTCTTCCCCAATAC 59.899 54.545 0.00 0.00 0.00 1.89
2098 2422 1.611977 TCCCCAATACGTATGCTCTCG 59.388 52.381 9.24 0.00 0.00 4.04
2109 2433 1.548357 ATGCTCTCGTCCTTGCCACT 61.548 55.000 0.00 0.00 0.00 4.00
2127 2451 2.198980 CCCTCCCCTACCCTCTCG 59.801 72.222 0.00 0.00 0.00 4.04
2153 2477 1.118965 TCTCTTCTGGCACCGGTTCA 61.119 55.000 2.97 5.69 0.00 3.18
2180 2504 1.698506 GACCGATCCAGAGTCTCCAT 58.301 55.000 0.00 0.00 0.00 3.41
2182 2506 0.678395 CCGATCCAGAGTCTCCATGG 59.322 60.000 4.97 4.97 35.30 3.66
2183 2507 1.697284 CGATCCAGAGTCTCCATGGA 58.303 55.000 15.27 15.27 46.69 3.41
2184 2508 1.339610 CGATCCAGAGTCTCCATGGAC 59.660 57.143 11.44 2.30 45.53 4.02
2185 2509 2.392662 GATCCAGAGTCTCCATGGACA 58.607 52.381 11.44 0.00 45.53 4.02
2186 2510 2.325661 TCCAGAGTCTCCATGGACAA 57.674 50.000 11.44 0.00 38.19 3.18
2187 2511 2.837947 TCCAGAGTCTCCATGGACAAT 58.162 47.619 11.44 0.00 38.19 2.71
2189 2513 3.963374 TCCAGAGTCTCCATGGACAATAG 59.037 47.826 11.44 0.12 38.19 1.73
2190 2514 3.494048 CCAGAGTCTCCATGGACAATAGC 60.494 52.174 11.44 0.00 38.57 2.97
2191 2515 2.363680 AGAGTCTCCATGGACAATAGCG 59.636 50.000 11.44 0.00 38.57 4.26
2197 2521 1.726791 CCATGGACAATAGCGCGTATC 59.273 52.381 5.56 0.00 0.00 2.24
2198 2522 1.726791 CATGGACAATAGCGCGTATCC 59.273 52.381 8.43 7.02 0.00 2.59
2199 2523 0.318360 TGGACAATAGCGCGTATCCG 60.318 55.000 8.43 0.00 37.07 4.18
2215 2539 4.849329 CGCAGGGCTACGTCGTCC 62.849 72.222 1.75 1.75 0.00 4.79
2228 2552 1.599419 CGTCGTCCATGATCACGCATA 60.599 52.381 0.00 0.00 35.93 3.14
2277 2601 4.992951 TCAAAGTACGTAAGCTTTTCCTCC 59.007 41.667 3.20 0.00 45.62 4.30
2298 2622 2.071778 AAGTGTGGCATGGTGAAAGT 57.928 45.000 0.00 0.00 0.00 2.66
2339 2664 5.691754 GTGAGGCCATCTTTTTGTTTGTTAG 59.308 40.000 5.01 0.00 0.00 2.34
2370 2695 2.644299 TCTGAACCATGGTTGTGGAGAT 59.356 45.455 34.47 8.16 42.02 2.75
2395 2720 0.098905 GACAGCGAGATGAGCGTGTA 59.901 55.000 0.00 0.00 40.04 2.90
2396 2721 0.741326 ACAGCGAGATGAGCGTGTAT 59.259 50.000 0.00 0.00 40.04 2.29
2397 2722 1.947456 ACAGCGAGATGAGCGTGTATA 59.053 47.619 0.00 0.00 40.04 1.47
2398 2723 2.554462 ACAGCGAGATGAGCGTGTATAT 59.446 45.455 0.00 0.00 40.04 0.86
2413 2738 8.225603 AGCGTGTATATGAAATTCCAAAAGAT 57.774 30.769 0.00 0.00 0.00 2.40
2422 2747 8.986477 ATGAAATTCCAAAAGATAGAAAACGG 57.014 30.769 0.00 0.00 0.00 4.44
2461 2786 5.036117 AGAAGCAAGGAGGCGATAATTAA 57.964 39.130 0.00 0.00 39.27 1.40
2512 2837 8.392372 CCTAAAATTAGGCAGGTAGTTAATCC 57.608 38.462 6.30 0.00 43.43 3.01
2518 2843 2.036089 GGCAGGTAGTTAATCCTCTCCG 59.964 54.545 0.00 0.00 30.91 4.63
2534 2863 3.881783 CCGTAAACGCCATAAACGG 57.118 52.632 0.00 0.00 46.04 4.44
2551 2880 2.515071 GGAGGCAGGCTGGATCGAT 61.515 63.158 17.64 0.00 0.00 3.59
2561 2890 1.871408 GCTGGATCGATCTGCGTGATT 60.871 52.381 23.96 0.00 41.80 2.57
2574 2903 1.270358 GCGTGATTACATCTCCCCCTC 60.270 57.143 0.00 0.00 0.00 4.30
2598 2927 7.295930 TCTATATAACGAGCTATGTCAACACG 58.704 38.462 0.00 0.00 0.00 4.49
2621 2950 2.232452 CGCCCCAATATCAAACCACAAA 59.768 45.455 0.00 0.00 0.00 2.83
2664 2993 2.487532 GGCCATGATGCTGTCCTGC 61.488 63.158 0.00 0.00 0.00 4.85
2745 3090 5.831997 AGCTTTTTGTTCCATTCTGTGTAC 58.168 37.500 0.00 0.00 0.00 2.90
2746 3091 5.594317 AGCTTTTTGTTCCATTCTGTGTACT 59.406 36.000 0.00 0.00 0.00 2.73
2747 3092 6.770785 AGCTTTTTGTTCCATTCTGTGTACTA 59.229 34.615 0.00 0.00 0.00 1.82
2748 3093 7.041098 AGCTTTTTGTTCCATTCTGTGTACTAG 60.041 37.037 0.00 0.00 0.00 2.57
2749 3094 6.554334 TTTTGTTCCATTCTGTGTACTAGC 57.446 37.500 0.00 0.00 0.00 3.42
2752 3097 5.865085 TGTTCCATTCTGTGTACTAGCTTT 58.135 37.500 0.00 0.00 0.00 3.51
2753 3098 6.296026 TGTTCCATTCTGTGTACTAGCTTTT 58.704 36.000 0.00 0.00 0.00 2.27
2754 3099 6.770785 TGTTCCATTCTGTGTACTAGCTTTTT 59.229 34.615 0.00 0.00 0.00 1.94
2755 3100 6.801539 TCCATTCTGTGTACTAGCTTTTTG 57.198 37.500 0.00 0.00 0.00 2.44
2756 3101 5.181245 TCCATTCTGTGTACTAGCTTTTTGC 59.819 40.000 0.00 0.00 43.29 3.68
2771 3120 3.634568 TTTTGCGTTGACACTATTGGG 57.365 42.857 0.00 0.00 0.00 4.12
2781 3130 1.004277 ACACTATTGGGAACACCGCAT 59.996 47.619 0.00 0.00 44.64 4.73
2787 3136 1.698506 TGGGAACACCGCATCTTTTT 58.301 45.000 0.00 0.00 44.64 1.94
2806 3155 5.970317 TTTTTGCATGACTGATGACAGAT 57.030 34.783 0.00 0.00 46.03 2.90
2823 3172 7.041635 TGACAGATGTTGTTGTGATTTTGAT 57.958 32.000 0.00 0.00 41.05 2.57
2849 3198 2.047274 CATGCCCAAGGTCGACGT 60.047 61.111 9.92 7.31 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 6.181190 GGAGGTACAAGGAGAAAAGCTAAAT 58.819 40.000 0.00 0.00 0.00 1.40
95 101 6.507568 CCTAGGGAGGTCTTCATAATCCTAT 58.492 44.000 0.00 0.00 38.16 2.57
98 104 3.841255 CCCTAGGGAGGTCTTCATAATCC 59.159 52.174 24.99 0.00 41.95 3.01
126 132 9.521841 CACAAGGTAAGGTGATCTAGATAGATA 57.478 37.037 4.89 0.00 42.79 1.98
153 192 6.068473 ACATAAACAACGAAGGAAAAGGAC 57.932 37.500 0.00 0.00 0.00 3.85
155 194 6.206048 AGGTACATAAACAACGAAGGAAAAGG 59.794 38.462 0.00 0.00 0.00 3.11
156 195 7.198306 AGGTACATAAACAACGAAGGAAAAG 57.802 36.000 0.00 0.00 0.00 2.27
160 199 5.467399 CACAAGGTACATAAACAACGAAGGA 59.533 40.000 0.00 0.00 0.00 3.36
165 204 5.642063 AGATCCACAAGGTACATAAACAACG 59.358 40.000 0.00 0.00 35.89 4.10
169 208 6.430000 ACACAAGATCCACAAGGTACATAAAC 59.570 38.462 0.00 0.00 35.89 2.01
172 211 5.755409 ACACAAGATCCACAAGGTACATA 57.245 39.130 0.00 0.00 35.89 2.29
209 476 2.268298 GACACAAACACGTGACAGACT 58.732 47.619 25.01 0.00 39.34 3.24
233 500 5.045286 AGGCTGAAATTTAGGACAGACATCT 60.045 40.000 11.78 1.13 40.42 2.90
234 501 5.065731 CAGGCTGAAATTTAGGACAGACATC 59.934 44.000 9.42 0.00 40.42 3.06
240 507 5.336690 GCAAATCAGGCTGAAATTTAGGACA 60.337 40.000 22.84 0.00 0.00 4.02
268 535 5.030295 GCGTGTCCATTTCTTATTCATGTG 58.970 41.667 0.00 0.00 0.00 3.21
276 543 1.434555 CACGGCGTGTCCATTTCTTA 58.565 50.000 30.56 0.00 34.01 2.10
281 548 2.359850 ATGCACGGCGTGTCCATT 60.360 55.556 36.68 17.07 35.75 3.16
304 571 4.193334 TCCGAGCGCCAGACATCG 62.193 66.667 2.29 5.50 35.02 3.84
361 628 6.373779 CCTCGATGCATGAATTAAATGGTAC 58.626 40.000 2.46 0.00 0.00 3.34
363 630 4.279169 CCCTCGATGCATGAATTAAATGGT 59.721 41.667 2.46 0.00 0.00 3.55
364 631 4.801891 CCCTCGATGCATGAATTAAATGG 58.198 43.478 2.46 0.00 0.00 3.16
365 632 4.232221 GCCCTCGATGCATGAATTAAATG 58.768 43.478 2.46 0.00 0.00 2.32
366 633 3.058016 CGCCCTCGATGCATGAATTAAAT 60.058 43.478 2.46 0.00 38.10 1.40
367 634 2.290367 CGCCCTCGATGCATGAATTAAA 59.710 45.455 2.46 0.00 38.10 1.52
368 635 1.872952 CGCCCTCGATGCATGAATTAA 59.127 47.619 2.46 0.00 38.10 1.40
369 636 1.069978 TCGCCCTCGATGCATGAATTA 59.930 47.619 2.46 0.00 40.21 1.40
370 637 0.179048 TCGCCCTCGATGCATGAATT 60.179 50.000 2.46 0.00 40.21 2.17
371 638 0.179048 TTCGCCCTCGATGCATGAAT 60.179 50.000 2.46 0.00 45.04 2.57
372 639 1.089481 GTTCGCCCTCGATGCATGAA 61.089 55.000 2.46 0.00 45.04 2.57
373 640 1.521457 GTTCGCCCTCGATGCATGA 60.521 57.895 2.46 0.89 45.04 3.07
374 641 2.537560 GGTTCGCCCTCGATGCATG 61.538 63.158 2.46 0.00 45.04 4.06
375 642 2.203070 GGTTCGCCCTCGATGCAT 60.203 61.111 0.00 0.00 45.04 3.96
376 643 3.247056 TTGGTTCGCCCTCGATGCA 62.247 57.895 7.70 0.00 45.04 3.96
377 644 2.435938 TTGGTTCGCCCTCGATGC 60.436 61.111 0.00 0.00 45.04 3.91
378 645 2.106683 GGTTGGTTCGCCCTCGATG 61.107 63.158 0.00 0.00 45.04 3.84
379 646 2.267961 GGTTGGTTCGCCCTCGAT 59.732 61.111 0.00 0.00 45.04 3.59
380 647 2.920912 AGGTTGGTTCGCCCTCGA 60.921 61.111 0.00 0.00 43.89 4.04
381 648 2.742372 CAGGTTGGTTCGCCCTCG 60.742 66.667 0.00 0.00 36.08 4.63
382 649 3.056328 GCAGGTTGGTTCGCCCTC 61.056 66.667 0.00 0.00 36.08 4.30
396 663 1.656652 CTCTAACCATCCAACCGCAG 58.343 55.000 0.00 0.00 0.00 5.18
397 664 0.251916 CCTCTAACCATCCAACCGCA 59.748 55.000 0.00 0.00 0.00 5.69
398 665 0.463833 CCCTCTAACCATCCAACCGC 60.464 60.000 0.00 0.00 0.00 5.68
399 666 1.134491 GTCCCTCTAACCATCCAACCG 60.134 57.143 0.00 0.00 0.00 4.44
400 667 2.092914 CAGTCCCTCTAACCATCCAACC 60.093 54.545 0.00 0.00 0.00 3.77
401 668 2.572104 ACAGTCCCTCTAACCATCCAAC 59.428 50.000 0.00 0.00 0.00 3.77
402 669 2.571653 CACAGTCCCTCTAACCATCCAA 59.428 50.000 0.00 0.00 0.00 3.53
403 670 2.187958 CACAGTCCCTCTAACCATCCA 58.812 52.381 0.00 0.00 0.00 3.41
404 671 1.486726 CCACAGTCCCTCTAACCATCC 59.513 57.143 0.00 0.00 0.00 3.51
405 672 2.188817 ACCACAGTCCCTCTAACCATC 58.811 52.381 0.00 0.00 0.00 3.51
406 673 2.344093 ACCACAGTCCCTCTAACCAT 57.656 50.000 0.00 0.00 0.00 3.55
407 674 3.371965 GATACCACAGTCCCTCTAACCA 58.628 50.000 0.00 0.00 0.00 3.67
408 675 2.699321 GGATACCACAGTCCCTCTAACC 59.301 54.545 0.00 0.00 0.00 2.85
424 691 1.224592 CCTGGTGTGCTGGGGATAC 59.775 63.158 0.00 0.00 0.00 2.24
425 692 2.000701 CCCTGGTGTGCTGGGGATA 61.001 63.158 0.00 0.00 41.25 2.59
426 693 3.341629 CCCTGGTGTGCTGGGGAT 61.342 66.667 0.00 0.00 41.25 3.85
427 694 4.918360 ACCCTGGTGTGCTGGGGA 62.918 66.667 3.72 0.00 44.97 4.81
428 695 3.868200 GAACCCTGGTGTGCTGGGG 62.868 68.421 0.00 0.00 44.97 4.96
429 696 2.282462 GAACCCTGGTGTGCTGGG 60.282 66.667 0.00 0.00 46.07 4.45
430 697 1.152777 TTGAACCCTGGTGTGCTGG 60.153 57.895 0.00 0.00 0.00 4.85
431 698 0.466189 ACTTGAACCCTGGTGTGCTG 60.466 55.000 0.00 0.00 0.00 4.41
432 699 0.179018 GACTTGAACCCTGGTGTGCT 60.179 55.000 0.00 0.00 0.00 4.40
433 700 0.465460 TGACTTGAACCCTGGTGTGC 60.465 55.000 0.00 0.00 0.00 4.57
434 701 1.881973 CATGACTTGAACCCTGGTGTG 59.118 52.381 0.00 0.00 0.00 3.82
435 702 1.202927 CCATGACTTGAACCCTGGTGT 60.203 52.381 0.00 0.00 0.00 4.16
436 703 1.202927 ACCATGACTTGAACCCTGGTG 60.203 52.381 0.00 0.00 35.73 4.17
437 704 1.149101 ACCATGACTTGAACCCTGGT 58.851 50.000 0.00 0.00 32.28 4.00
438 705 1.538047 CACCATGACTTGAACCCTGG 58.462 55.000 0.00 0.00 0.00 4.45
439 706 0.883833 GCACCATGACTTGAACCCTG 59.116 55.000 0.00 0.00 0.00 4.45
440 707 0.773644 AGCACCATGACTTGAACCCT 59.226 50.000 0.00 0.00 0.00 4.34
441 708 1.168714 GAGCACCATGACTTGAACCC 58.831 55.000 0.00 0.00 0.00 4.11
442 709 0.798776 CGAGCACCATGACTTGAACC 59.201 55.000 0.00 0.00 0.00 3.62
443 710 0.166814 GCGAGCACCATGACTTGAAC 59.833 55.000 0.00 0.00 0.00 3.18
444 711 0.250252 TGCGAGCACCATGACTTGAA 60.250 50.000 0.00 0.00 0.00 2.69
445 712 0.036105 ATGCGAGCACCATGACTTGA 60.036 50.000 0.00 0.00 0.00 3.02
446 713 0.806868 AATGCGAGCACCATGACTTG 59.193 50.000 0.00 0.00 0.00 3.16
447 714 1.538047 AAATGCGAGCACCATGACTT 58.462 45.000 0.00 0.00 0.00 3.01
448 715 2.401583 TAAATGCGAGCACCATGACT 57.598 45.000 0.00 0.00 0.00 3.41
449 716 3.548818 GGAATAAATGCGAGCACCATGAC 60.549 47.826 0.00 0.00 0.00 3.06
450 717 2.618241 GGAATAAATGCGAGCACCATGA 59.382 45.455 0.00 0.00 0.00 3.07
451 718 2.620115 AGGAATAAATGCGAGCACCATG 59.380 45.455 0.00 0.00 0.00 3.66
452 719 2.620115 CAGGAATAAATGCGAGCACCAT 59.380 45.455 0.00 0.00 0.00 3.55
453 720 2.016318 CAGGAATAAATGCGAGCACCA 58.984 47.619 0.00 0.00 0.00 4.17
454 721 2.288666 TCAGGAATAAATGCGAGCACC 58.711 47.619 0.00 0.00 0.00 5.01
455 722 4.558538 ATTCAGGAATAAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
456 723 5.581126 AAATTCAGGAATAAATGCGAGCA 57.419 34.783 0.00 0.00 0.00 4.26
457 724 8.579682 AAATAAATTCAGGAATAAATGCGAGC 57.420 30.769 0.00 0.00 0.00 5.03
458 725 9.734620 TGAAATAAATTCAGGAATAAATGCGAG 57.265 29.630 0.00 0.00 43.08 5.03
472 739 5.449862 CGCCGGAAATCCTGAAATAAATTCA 60.450 40.000 5.05 0.00 45.71 2.57
473 740 4.976116 CGCCGGAAATCCTGAAATAAATTC 59.024 41.667 5.05 0.00 38.60 2.17
474 741 4.642885 TCGCCGGAAATCCTGAAATAAATT 59.357 37.500 5.05 0.00 0.00 1.82
475 742 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
476 743 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
477 744 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
478 745 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
479 746 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
480 747 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
481 748 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
482 749 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
483 750 1.819208 TGCATCGCCGGAAATCCTG 60.819 57.895 5.05 0.00 0.00 3.86
484 751 1.819632 GTGCATCGCCGGAAATCCT 60.820 57.895 5.05 0.00 0.00 3.24
485 752 1.447317 ATGTGCATCGCCGGAAATCC 61.447 55.000 5.05 0.00 0.00 3.01
486 753 0.381801 AATGTGCATCGCCGGAAATC 59.618 50.000 5.05 0.00 0.00 2.17
487 754 0.381801 GAATGTGCATCGCCGGAAAT 59.618 50.000 5.05 0.00 0.00 2.17
488 755 0.957888 TGAATGTGCATCGCCGGAAA 60.958 50.000 5.05 0.00 0.00 3.13
489 756 1.368345 CTGAATGTGCATCGCCGGAA 61.368 55.000 5.05 0.00 0.00 4.30
490 757 1.815003 CTGAATGTGCATCGCCGGA 60.815 57.895 5.05 0.00 0.00 5.14
491 758 2.108514 ACTGAATGTGCATCGCCGG 61.109 57.895 0.00 0.00 0.00 6.13
492 759 1.061411 CACTGAATGTGCATCGCCG 59.939 57.895 0.00 0.00 40.06 6.46
493 760 1.430632 CCACTGAATGTGCATCGCC 59.569 57.895 0.00 0.00 44.92 5.54
494 761 1.026182 TCCCACTGAATGTGCATCGC 61.026 55.000 0.00 0.00 44.92 4.58
495 762 1.012086 CTCCCACTGAATGTGCATCG 58.988 55.000 0.00 0.00 44.92 3.84
496 763 1.065199 TCCTCCCACTGAATGTGCATC 60.065 52.381 0.00 0.00 44.92 3.91
497 764 0.994247 TCCTCCCACTGAATGTGCAT 59.006 50.000 0.00 0.00 44.92 3.96
498 765 0.325933 CTCCTCCCACTGAATGTGCA 59.674 55.000 0.00 0.00 44.92 4.57
499 766 0.615331 TCTCCTCCCACTGAATGTGC 59.385 55.000 0.00 0.00 44.92 4.57
500 767 1.404717 CGTCTCCTCCCACTGAATGTG 60.405 57.143 0.00 0.00 45.80 3.21
501 768 0.898320 CGTCTCCTCCCACTGAATGT 59.102 55.000 0.00 0.00 0.00 2.71
502 769 0.898320 ACGTCTCCTCCCACTGAATG 59.102 55.000 0.00 0.00 0.00 2.67
503 770 1.550976 GAACGTCTCCTCCCACTGAAT 59.449 52.381 0.00 0.00 0.00 2.57
504 771 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
505 772 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
506 773 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
507 774 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
520 787 0.179145 ACATCATCGTCGACGGGAAC 60.179 55.000 35.05 0.00 40.29 3.62
521 788 0.179148 CACATCATCGTCGACGGGAA 60.179 55.000 35.05 21.24 40.29 3.97
522 789 1.431845 CACATCATCGTCGACGGGA 59.568 57.895 35.05 30.41 40.29 5.14
523 790 2.230940 GCACATCATCGTCGACGGG 61.231 63.158 35.05 26.75 40.29 5.28
524 791 2.230940 GGCACATCATCGTCGACGG 61.231 63.158 35.05 21.47 40.29 4.79
525 792 0.028902 TAGGCACATCATCGTCGACG 59.971 55.000 31.30 31.30 41.45 5.12
526 793 1.478137 GTAGGCACATCATCGTCGAC 58.522 55.000 5.18 5.18 0.00 4.20
527 794 0.028902 CGTAGGCACATCATCGTCGA 59.971 55.000 0.00 0.00 0.00 4.20
528 795 0.934901 CCGTAGGCACATCATCGTCG 60.935 60.000 0.00 0.00 46.14 5.12
529 796 2.886859 CCGTAGGCACATCATCGTC 58.113 57.895 0.00 0.00 46.14 4.20
542 809 7.827819 TCTTGAAATTAATGAGTCACCGTAG 57.172 36.000 0.00 0.00 0.00 3.51
543 810 8.038351 TCATCTTGAAATTAATGAGTCACCGTA 58.962 33.333 0.00 0.00 0.00 4.02
544 811 6.878923 TCATCTTGAAATTAATGAGTCACCGT 59.121 34.615 0.00 0.00 0.00 4.83
545 812 7.307493 TCATCTTGAAATTAATGAGTCACCG 57.693 36.000 0.00 0.00 0.00 4.94
549 816 9.837525 GGCATATCATCTTGAAATTAATGAGTC 57.162 33.333 0.00 0.00 32.09 3.36
550 817 8.509690 CGGCATATCATCTTGAAATTAATGAGT 58.490 33.333 0.00 0.00 32.09 3.41
551 818 7.966753 CCGGCATATCATCTTGAAATTAATGAG 59.033 37.037 0.00 0.00 32.09 2.90
552 819 7.575532 GCCGGCATATCATCTTGAAATTAATGA 60.576 37.037 24.80 0.00 33.04 2.57
553 820 6.529125 GCCGGCATATCATCTTGAAATTAATG 59.471 38.462 24.80 0.00 0.00 1.90
554 821 6.435277 AGCCGGCATATCATCTTGAAATTAAT 59.565 34.615 31.54 0.00 0.00 1.40
555 822 5.769662 AGCCGGCATATCATCTTGAAATTAA 59.230 36.000 31.54 0.00 0.00 1.40
556 823 5.316167 AGCCGGCATATCATCTTGAAATTA 58.684 37.500 31.54 0.00 0.00 1.40
557 824 4.147321 AGCCGGCATATCATCTTGAAATT 58.853 39.130 31.54 0.00 0.00 1.82
558 825 3.755378 GAGCCGGCATATCATCTTGAAAT 59.245 43.478 31.54 0.06 0.00 2.17
559 826 3.141398 GAGCCGGCATATCATCTTGAAA 58.859 45.455 31.54 0.00 0.00 2.69
560 827 2.104622 TGAGCCGGCATATCATCTTGAA 59.895 45.455 31.54 0.00 0.00 2.69
561 828 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
562 829 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
563 830 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
564 831 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
565 832 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
566 833 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
567 834 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
568 835 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
569 836 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
570 837 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
571 838 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
572 839 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
573 840 2.781595 TTCCGAAAGACTGAGCCGGC 62.782 60.000 21.89 21.89 39.96 6.13
574 841 0.737715 CTTCCGAAAGACTGAGCCGG 60.738 60.000 0.00 0.00 41.36 6.13
575 842 0.038159 ACTTCCGAAAGACTGAGCCG 60.038 55.000 0.00 0.00 36.30 5.52
576 843 1.433534 CACTTCCGAAAGACTGAGCC 58.566 55.000 0.00 0.00 36.30 4.70
577 844 0.793250 GCACTTCCGAAAGACTGAGC 59.207 55.000 0.00 0.00 36.30 4.26
578 845 2.288457 TGAGCACTTCCGAAAGACTGAG 60.288 50.000 0.00 0.00 36.30 3.35
579 846 1.686587 TGAGCACTTCCGAAAGACTGA 59.313 47.619 0.00 0.00 36.30 3.41
580 847 2.154854 TGAGCACTTCCGAAAGACTG 57.845 50.000 0.00 0.00 36.30 3.51
581 848 3.118956 CCTATGAGCACTTCCGAAAGACT 60.119 47.826 0.00 0.00 36.30 3.24
582 849 3.190874 CCTATGAGCACTTCCGAAAGAC 58.809 50.000 0.00 0.00 36.30 3.01
583 850 2.168521 CCCTATGAGCACTTCCGAAAGA 59.831 50.000 0.00 0.00 36.30 2.52
584 851 2.168521 TCCCTATGAGCACTTCCGAAAG 59.831 50.000 0.00 0.00 38.54 2.62
585 852 2.184533 TCCCTATGAGCACTTCCGAAA 58.815 47.619 0.00 0.00 0.00 3.46
586 853 1.860641 TCCCTATGAGCACTTCCGAA 58.139 50.000 0.00 0.00 0.00 4.30
587 854 2.088104 ATCCCTATGAGCACTTCCGA 57.912 50.000 0.00 0.00 0.00 4.55
588 855 3.157881 TCTATCCCTATGAGCACTTCCG 58.842 50.000 0.00 0.00 0.00 4.30
589 856 4.021544 CACTCTATCCCTATGAGCACTTCC 60.022 50.000 0.00 0.00 0.00 3.46
590 857 4.586841 ACACTCTATCCCTATGAGCACTTC 59.413 45.833 0.00 0.00 0.00 3.01
591 858 4.343526 CACACTCTATCCCTATGAGCACTT 59.656 45.833 0.00 0.00 0.00 3.16
592 859 3.894427 CACACTCTATCCCTATGAGCACT 59.106 47.826 0.00 0.00 0.00 4.40
593 860 3.553922 GCACACTCTATCCCTATGAGCAC 60.554 52.174 0.00 0.00 0.00 4.40
594 861 2.630098 GCACACTCTATCCCTATGAGCA 59.370 50.000 0.00 0.00 0.00 4.26
595 862 2.352225 CGCACACTCTATCCCTATGAGC 60.352 54.545 0.00 0.00 0.00 4.26
596 863 2.887783 ACGCACACTCTATCCCTATGAG 59.112 50.000 0.00 0.00 0.00 2.90
597 864 2.623416 CACGCACACTCTATCCCTATGA 59.377 50.000 0.00 0.00 0.00 2.15
598 865 2.362397 ACACGCACACTCTATCCCTATG 59.638 50.000 0.00 0.00 0.00 2.23
599 866 2.362397 CACACGCACACTCTATCCCTAT 59.638 50.000 0.00 0.00 0.00 2.57
600 867 1.749063 CACACGCACACTCTATCCCTA 59.251 52.381 0.00 0.00 0.00 3.53
601 868 0.532573 CACACGCACACTCTATCCCT 59.467 55.000 0.00 0.00 0.00 4.20
602 869 0.246635 ACACACGCACACTCTATCCC 59.753 55.000 0.00 0.00 0.00 3.85
603 870 1.350193 CACACACGCACACTCTATCC 58.650 55.000 0.00 0.00 0.00 2.59
604 871 0.716108 GCACACACGCACACTCTATC 59.284 55.000 0.00 0.00 0.00 2.08
605 872 1.008875 CGCACACACGCACACTCTAT 61.009 55.000 0.00 0.00 0.00 1.98
606 873 1.660264 CGCACACACGCACACTCTA 60.660 57.895 0.00 0.00 0.00 2.43
607 874 2.961721 CGCACACACGCACACTCT 60.962 61.111 0.00 0.00 0.00 3.24
608 875 2.680427 GAACGCACACACGCACACTC 62.680 60.000 0.00 0.00 36.19 3.51
609 876 2.808958 GAACGCACACACGCACACT 61.809 57.895 0.00 0.00 36.19 3.55
610 877 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
611 878 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
612 879 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
613 880 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
614 881 1.011968 TCCTATGAACGCACACACGC 61.012 55.000 0.00 0.00 36.19 5.34
615 882 1.424403 TTCCTATGAACGCACACACG 58.576 50.000 0.00 0.00 39.50 4.49
616 883 3.000041 TCATTCCTATGAACGCACACAC 59.000 45.455 0.00 0.00 37.83 3.82
617 884 3.261580 CTCATTCCTATGAACGCACACA 58.738 45.455 0.00 0.00 40.17 3.72
618 885 3.062639 CACTCATTCCTATGAACGCACAC 59.937 47.826 0.00 0.00 40.17 3.82
619 886 3.261580 CACTCATTCCTATGAACGCACA 58.738 45.455 0.00 0.00 40.17 4.57
620 887 3.262420 ACACTCATTCCTATGAACGCAC 58.738 45.455 0.00 0.00 40.17 5.34
621 888 3.610040 ACACTCATTCCTATGAACGCA 57.390 42.857 0.00 0.00 40.17 5.24
622 889 4.084328 GCATACACTCATTCCTATGAACGC 60.084 45.833 0.00 0.00 40.17 4.84
623 890 5.049828 TGCATACACTCATTCCTATGAACG 58.950 41.667 0.00 0.00 40.17 3.95
624 891 5.050769 CGTGCATACACTCATTCCTATGAAC 60.051 44.000 0.00 0.00 45.10 3.18
625 892 5.049828 CGTGCATACACTCATTCCTATGAA 58.950 41.667 0.00 0.00 45.10 2.57
626 893 4.099419 ACGTGCATACACTCATTCCTATGA 59.901 41.667 0.00 0.00 45.10 2.15
627 894 4.209911 CACGTGCATACACTCATTCCTATG 59.790 45.833 0.82 0.00 45.10 2.23
628 895 4.141937 ACACGTGCATACACTCATTCCTAT 60.142 41.667 17.22 0.00 45.10 2.57
629 896 3.194755 ACACGTGCATACACTCATTCCTA 59.805 43.478 17.22 0.00 45.10 2.94
630 897 2.028112 ACACGTGCATACACTCATTCCT 60.028 45.455 17.22 0.00 45.10 3.36
631 898 2.346803 ACACGTGCATACACTCATTCC 58.653 47.619 17.22 0.00 45.10 3.01
632 899 6.640907 TCATATACACGTGCATACACTCATTC 59.359 38.462 17.22 0.00 45.10 2.67
633 900 6.512297 TCATATACACGTGCATACACTCATT 58.488 36.000 17.22 0.00 45.10 2.57
634 901 6.084326 TCATATACACGTGCATACACTCAT 57.916 37.500 17.22 0.00 45.10 2.90
635 902 5.508200 TCATATACACGTGCATACACTCA 57.492 39.130 17.22 0.00 45.10 3.41
636 903 4.383052 GCTCATATACACGTGCATACACTC 59.617 45.833 17.22 0.27 45.10 3.51
637 904 4.299155 GCTCATATACACGTGCATACACT 58.701 43.478 17.22 0.00 45.10 3.55
638 905 3.119628 CGCTCATATACACGTGCATACAC 59.880 47.826 17.22 2.67 43.76 2.90
639 906 3.305110 CGCTCATATACACGTGCATACA 58.695 45.455 17.22 2.39 0.00 2.29
640 907 2.090658 GCGCTCATATACACGTGCATAC 59.909 50.000 17.22 0.00 33.41 2.39
641 908 2.030274 AGCGCTCATATACACGTGCATA 60.030 45.455 17.22 13.68 35.49 3.14
642 909 1.139989 GCGCTCATATACACGTGCAT 58.860 50.000 17.22 11.52 33.41 3.96
643 910 0.102300 AGCGCTCATATACACGTGCA 59.898 50.000 17.22 2.06 35.49 4.57
644 911 1.071239 CAAGCGCTCATATACACGTGC 60.071 52.381 17.22 0.00 0.00 5.34
645 912 1.071239 GCAAGCGCTCATATACACGTG 60.071 52.381 12.06 15.48 34.30 4.49
646 913 1.209128 GCAAGCGCTCATATACACGT 58.791 50.000 12.06 0.00 34.30 4.49
647 914 0.159554 CGCAAGCGCTCATATACACG 59.840 55.000 12.06 2.00 35.30 4.49
648 915 1.190323 GACGCAAGCGCTCATATACAC 59.810 52.381 12.06 0.00 44.19 2.90
649 916 1.067060 AGACGCAAGCGCTCATATACA 59.933 47.619 12.06 0.00 44.19 2.29
650 917 1.453524 CAGACGCAAGCGCTCATATAC 59.546 52.381 12.06 1.00 44.19 1.47
651 918 1.067060 ACAGACGCAAGCGCTCATATA 59.933 47.619 12.06 0.00 44.19 0.86
652 919 0.179100 ACAGACGCAAGCGCTCATAT 60.179 50.000 12.06 0.00 44.19 1.78
653 920 0.454196 TACAGACGCAAGCGCTCATA 59.546 50.000 12.06 5.16 44.19 2.15
654 921 1.078759 GTACAGACGCAAGCGCTCAT 61.079 55.000 12.06 0.00 44.19 2.90
655 922 1.733041 GTACAGACGCAAGCGCTCA 60.733 57.895 12.06 0.83 44.19 4.26
656 923 1.444553 AGTACAGACGCAAGCGCTC 60.445 57.895 12.06 11.06 44.19 5.03
657 924 1.734477 CAGTACAGACGCAAGCGCT 60.734 57.895 15.09 2.64 44.19 5.92
658 925 2.022129 ACAGTACAGACGCAAGCGC 61.022 57.895 15.09 0.00 44.19 5.92
659 926 0.939577 ACACAGTACAGACGCAAGCG 60.940 55.000 13.50 13.50 46.03 4.68
660 927 1.217882 AACACAGTACAGACGCAAGC 58.782 50.000 0.00 0.00 45.62 4.01
662 929 5.798015 TTTTTAACACAGTACAGACGCAA 57.202 34.783 0.00 0.00 0.00 4.85
682 949 2.493278 CCTCCTCCATGCGTGAATTTTT 59.507 45.455 7.72 0.00 0.00 1.94
683 950 2.094675 CCTCCTCCATGCGTGAATTTT 58.905 47.619 7.72 0.00 0.00 1.82
684 951 1.004745 ACCTCCTCCATGCGTGAATTT 59.995 47.619 7.72 0.00 0.00 1.82
708 975 5.873179 TTAAACGGTAGCAAGAGGATTTG 57.127 39.130 0.00 0.00 0.00 2.32
732 999 5.958955 ACTAGCTGGAATTGATTTGCTTTC 58.041 37.500 3.17 0.00 32.72 2.62
757 1024 3.439129 CCCCGTCGCTTATCTTTTTCTTT 59.561 43.478 0.00 0.00 0.00 2.52
760 1028 2.624636 TCCCCGTCGCTTATCTTTTTC 58.375 47.619 0.00 0.00 0.00 2.29
763 1031 1.202651 CCATCCCCGTCGCTTATCTTT 60.203 52.381 0.00 0.00 0.00 2.52
769 1037 2.364579 TACCCATCCCCGTCGCTT 60.365 61.111 0.00 0.00 0.00 4.68
775 1043 0.523072 CGTATACGTACCCATCCCCG 59.477 60.000 17.16 0.00 34.11 5.73
856 1133 7.420214 GGAAGATTGGTCCTCCATGAGTTTATA 60.420 40.741 0.00 0.00 43.91 0.98
863 1140 1.846439 GGGAAGATTGGTCCTCCATGA 59.154 52.381 0.00 0.00 43.91 3.07
877 1154 3.706373 GAGGCGCACAGGGGAAGA 61.706 66.667 10.83 0.00 0.00 2.87
884 1161 4.767255 GAGGGTGGAGGCGCACAG 62.767 72.222 10.83 0.00 0.00 3.66
910 1187 1.066787 AGCTCCTTTCGCTAGTGTTCC 60.067 52.381 2.66 0.00 35.63 3.62
911 1188 1.996191 CAGCTCCTTTCGCTAGTGTTC 59.004 52.381 2.66 0.00 35.63 3.18
912 1189 1.344763 ACAGCTCCTTTCGCTAGTGTT 59.655 47.619 2.66 0.00 35.63 3.32
913 1190 0.969894 ACAGCTCCTTTCGCTAGTGT 59.030 50.000 2.66 0.00 35.63 3.55
945 1222 5.809001 TGTATGTTTGATCTCTTCTTGGCT 58.191 37.500 0.00 0.00 0.00 4.75
1013 1308 2.140792 ACCACGCCTGTGTTCCTCT 61.141 57.895 0.00 0.00 44.92 3.69
1076 1371 0.904649 ACCTGATTCGGCATCACAGA 59.095 50.000 0.00 0.00 36.94 3.41
1078 1373 2.236146 ACTAACCTGATTCGGCATCACA 59.764 45.455 0.00 0.00 36.94 3.58
1458 1753 9.996554 AAAATCACATGTCGGTCAGATAATATA 57.003 29.630 0.00 0.00 0.00 0.86
1459 1754 8.908786 AAAATCACATGTCGGTCAGATAATAT 57.091 30.769 0.00 0.00 0.00 1.28
1460 1755 8.204160 AGAAAATCACATGTCGGTCAGATAATA 58.796 33.333 0.00 0.00 0.00 0.98
1461 1756 7.050377 AGAAAATCACATGTCGGTCAGATAAT 58.950 34.615 0.00 0.00 0.00 1.28
1462 1757 6.406370 AGAAAATCACATGTCGGTCAGATAA 58.594 36.000 0.00 0.00 0.00 1.75
1466 1761 4.692625 AGAAGAAAATCACATGTCGGTCAG 59.307 41.667 0.00 0.00 0.00 3.51
1484 1779 6.952938 ACAGAGGCAGATATATGATGAGAAGA 59.047 38.462 0.39 0.00 0.00 2.87
1494 1789 7.510685 TCCAGAGTTTTACAGAGGCAGATATAT 59.489 37.037 0.00 0.00 0.00 0.86
1495 1790 6.839134 TCCAGAGTTTTACAGAGGCAGATATA 59.161 38.462 0.00 0.00 0.00 0.86
1496 1791 5.663106 TCCAGAGTTTTACAGAGGCAGATAT 59.337 40.000 0.00 0.00 0.00 1.63
1497 1792 5.023452 TCCAGAGTTTTACAGAGGCAGATA 58.977 41.667 0.00 0.00 0.00 1.98
1498 1793 3.840666 TCCAGAGTTTTACAGAGGCAGAT 59.159 43.478 0.00 0.00 0.00 2.90
1499 1794 3.006967 GTCCAGAGTTTTACAGAGGCAGA 59.993 47.826 0.00 0.00 0.00 4.26
1518 1813 3.649073 ACATTTTAAAAGGCTTGCGTCC 58.351 40.909 12.27 0.00 0.00 4.79
1519 1814 4.546570 AGACATTTTAAAAGGCTTGCGTC 58.453 39.130 12.27 2.10 0.00 5.19
1603 1898 3.057596 GCTTGCTGGTACTTGCATACAAA 60.058 43.478 12.51 0.00 38.12 2.83
1613 1933 3.244911 ACAACCAATAGCTTGCTGGTACT 60.245 43.478 12.85 0.00 42.72 2.73
1637 1957 5.416947 ACGGATCAGTTTGTAGATTGGTAC 58.583 41.667 0.00 0.00 0.00 3.34
1638 1958 5.670792 ACGGATCAGTTTGTAGATTGGTA 57.329 39.130 0.00 0.00 0.00 3.25
1639 1959 4.553330 ACGGATCAGTTTGTAGATTGGT 57.447 40.909 0.00 0.00 0.00 3.67
1652 1972 8.696374 AGGTATGGATTATATACAACGGATCAG 58.304 37.037 0.00 0.00 33.66 2.90
1656 1976 9.496873 CAAAAGGTATGGATTATATACAACGGA 57.503 33.333 0.00 0.00 33.66 4.69
1757 2077 3.556843 GGGTATTGTTTTTGGCACATGCT 60.557 43.478 3.48 0.00 39.30 3.79
1766 2086 6.403049 GGGTCTATTTGGGGTATTGTTTTTG 58.597 40.000 0.00 0.00 0.00 2.44
1772 2092 2.858745 CGGGGTCTATTTGGGGTATTG 58.141 52.381 0.00 0.00 0.00 1.90
1877 2197 6.016024 TGTCCAATAATGAATCAAGGCTATGC 60.016 38.462 0.00 0.00 0.00 3.14
1882 2202 5.105797 TGTGTGTCCAATAATGAATCAAGGC 60.106 40.000 0.00 0.00 0.00 4.35
1889 2209 5.047448 CCCACAATGTGTGTCCAATAATGAA 60.047 40.000 12.79 0.00 46.45 2.57
1903 2223 1.004628 TCCTGATCACCCCACAATGTG 59.995 52.381 6.37 6.37 0.00 3.21
1911 2231 2.439507 ACATACATGTCCTGATCACCCC 59.560 50.000 0.00 0.00 35.87 4.95
1912 2232 3.845781 ACATACATGTCCTGATCACCC 57.154 47.619 0.00 0.00 35.87 4.61
1913 2233 6.536582 GCATATACATACATGTCCTGATCACC 59.463 42.308 0.00 0.00 41.97 4.02
1949 2273 7.354025 TGTTATTCAAAATGCAATTGCTGAG 57.646 32.000 29.37 15.27 42.66 3.35
1975 2299 6.256321 ACAATGATGCACTCTTTTGTGTTTTC 59.744 34.615 0.00 0.00 39.89 2.29
1991 2315 5.618056 TCTCAAACTCAGAACAATGATGC 57.382 39.130 0.00 0.00 0.00 3.91
1992 2316 6.959871 CGAATCTCAAACTCAGAACAATGATG 59.040 38.462 0.00 0.00 0.00 3.07
1999 2323 5.406780 ACATGACGAATCTCAAACTCAGAAC 59.593 40.000 0.00 0.00 0.00 3.01
2016 2340 2.411748 ACAAGTACATTGCGACATGACG 59.588 45.455 13.27 13.27 43.15 4.35
2031 2355 5.314529 CCGGGAGAGAGATATGTACAAGTA 58.685 45.833 0.00 0.00 0.00 2.24
2042 2366 3.532155 GCGTGCCGGGAGAGAGAT 61.532 66.667 2.18 0.00 0.00 2.75
2055 2379 4.363990 AGAGACCTGCGGTGCGTG 62.364 66.667 4.94 0.00 35.25 5.34
2061 2385 1.137825 GAAGACGAGAGACCTGCGG 59.862 63.158 0.00 0.00 0.00 5.69
2087 2411 0.872021 GGCAAGGACGAGAGCATACG 60.872 60.000 0.00 0.00 0.00 3.06
2098 2422 2.671682 GGAGGGAGTGGCAAGGAC 59.328 66.667 0.00 0.00 0.00 3.85
2109 2433 2.392816 CGAGAGGGTAGGGGAGGGA 61.393 68.421 0.00 0.00 0.00 4.20
2153 2477 3.080765 TGGATCGGTCGGGTGCAT 61.081 61.111 0.00 0.00 0.00 3.96
2180 2504 3.580904 GGATACGCGCTATTGTCCA 57.419 52.632 5.73 0.00 0.00 4.02
2197 2521 4.849329 GACGACGTAGCCCTGCGG 62.849 72.222 0.00 0.00 42.92 5.69
2198 2522 4.849329 GGACGACGTAGCCCTGCG 62.849 72.222 0.00 4.25 44.18 5.18
2199 2523 3.077519 ATGGACGACGTAGCCCTGC 62.078 63.158 0.00 0.00 0.00 4.85
2200 2524 1.226974 CATGGACGACGTAGCCCTG 60.227 63.158 0.00 0.00 0.00 4.45
2201 2525 0.755698 ATCATGGACGACGTAGCCCT 60.756 55.000 0.00 0.00 0.00 5.19
2202 2526 0.318784 GATCATGGACGACGTAGCCC 60.319 60.000 0.00 0.00 0.00 5.19
2203 2527 0.384309 TGATCATGGACGACGTAGCC 59.616 55.000 0.00 0.00 0.00 3.93
2204 2528 1.478137 GTGATCATGGACGACGTAGC 58.522 55.000 0.00 0.00 0.00 3.58
2205 2529 1.743182 CGTGATCATGGACGACGTAG 58.257 55.000 7.06 0.00 37.81 3.51
2206 2530 0.248336 GCGTGATCATGGACGACGTA 60.248 55.000 16.59 0.00 37.81 3.57
2207 2531 1.516386 GCGTGATCATGGACGACGT 60.516 57.895 16.59 0.00 37.81 4.34
2208 2532 0.871592 ATGCGTGATCATGGACGACG 60.872 55.000 16.59 6.18 37.81 5.12
2209 2533 1.787155 GTATGCGTGATCATGGACGAC 59.213 52.381 16.59 11.44 37.81 4.34
2210 2534 1.681264 AGTATGCGTGATCATGGACGA 59.319 47.619 16.59 3.09 37.81 4.20
2211 2535 2.140065 AGTATGCGTGATCATGGACG 57.860 50.000 16.59 8.00 38.63 4.79
2212 2536 2.032549 GCAAGTATGCGTGATCATGGAC 60.033 50.000 16.59 3.17 43.83 4.02
2213 2537 2.212652 GCAAGTATGCGTGATCATGGA 58.787 47.619 16.59 14.34 43.83 3.41
2214 2538 2.675767 GCAAGTATGCGTGATCATGG 57.324 50.000 16.59 4.79 43.83 3.66
2257 2581 4.612264 TGGAGGAAAAGCTTACGTACTT 57.388 40.909 0.00 0.00 0.00 2.24
2277 2601 2.101249 ACTTTCACCATGCCACACTTTG 59.899 45.455 0.00 0.00 0.00 2.77
2288 2612 0.951558 GCACCGTCAACTTTCACCAT 59.048 50.000 0.00 0.00 0.00 3.55
2298 2622 1.528076 ACTTGCATGGCACCGTCAA 60.528 52.632 4.44 0.00 38.71 3.18
2339 2664 4.379652 ACCATGGTTCAGATTGCAAAAAC 58.620 39.130 13.00 6.05 0.00 2.43
2370 2695 0.813821 CTCATCTCGCTGTCCACTCA 59.186 55.000 0.00 0.00 0.00 3.41
2397 2722 8.802267 TCCGTTTTCTATCTTTTGGAATTTCAT 58.198 29.630 0.00 0.00 0.00 2.57
2398 2723 8.172352 TCCGTTTTCTATCTTTTGGAATTTCA 57.828 30.769 0.00 0.00 0.00 2.69
2422 2747 9.298774 CCTTGCTTCTTAGAATGAAAATTGATC 57.701 33.333 0.00 0.00 0.00 2.92
2433 2758 2.501723 TCGCCTCCTTGCTTCTTAGAAT 59.498 45.455 0.00 0.00 0.00 2.40
2438 2763 3.567478 ATTATCGCCTCCTTGCTTCTT 57.433 42.857 0.00 0.00 0.00 2.52
2512 2837 2.280708 CGTTTATGGCGTTTACGGAGAG 59.719 50.000 4.29 0.00 40.23 3.20
2518 2843 1.063027 GCCTCCGTTTATGGCGTTTAC 59.937 52.381 0.00 0.00 37.11 2.01
2534 2863 1.005156 GATCGATCCAGCCTGCCTC 60.005 63.158 14.76 0.00 0.00 4.70
2561 2890 6.647461 TCGTTATATAGAGGGGGAGATGTA 57.353 41.667 0.00 0.00 0.00 2.29
2574 2903 7.076362 ACGTGTTGACATAGCTCGTTATATAG 58.924 38.462 0.00 0.00 36.55 1.31
2598 2927 1.404035 GTGGTTTGATATTGGGGCGAC 59.596 52.381 0.00 0.00 0.00 5.19
2633 2962 4.829968 CATCATGGCCGATCTAAGATCTT 58.170 43.478 13.56 13.56 0.00 2.40
2664 2993 0.249120 TTCACCGACTGTAGGCATGG 59.751 55.000 6.88 0.00 0.00 3.66
2745 3090 3.609103 AGTGTCAACGCAAAAAGCTAG 57.391 42.857 0.00 0.00 42.61 3.42
2746 3091 5.448438 CAATAGTGTCAACGCAAAAAGCTA 58.552 37.500 0.00 0.00 42.61 3.32
2747 3092 4.290155 CAATAGTGTCAACGCAAAAAGCT 58.710 39.130 0.00 0.00 42.61 3.74
2748 3093 3.425193 CCAATAGTGTCAACGCAAAAAGC 59.575 43.478 0.00 0.00 40.87 3.51
2749 3094 3.980775 CCCAATAGTGTCAACGCAAAAAG 59.019 43.478 0.00 0.00 0.00 2.27
2752 3097 2.852449 TCCCAATAGTGTCAACGCAAA 58.148 42.857 0.00 0.00 0.00 3.68
2753 3098 2.550606 GTTCCCAATAGTGTCAACGCAA 59.449 45.455 0.00 0.00 0.00 4.85
2754 3099 2.147958 GTTCCCAATAGTGTCAACGCA 58.852 47.619 0.00 0.00 0.00 5.24
2755 3100 2.095919 GTGTTCCCAATAGTGTCAACGC 60.096 50.000 0.00 0.00 0.00 4.84
2756 3101 2.482721 GGTGTTCCCAATAGTGTCAACG 59.517 50.000 0.00 0.00 0.00 4.10
2757 3102 2.482721 CGGTGTTCCCAATAGTGTCAAC 59.517 50.000 0.00 0.00 0.00 3.18
2763 3108 1.559682 AGATGCGGTGTTCCCAATAGT 59.440 47.619 0.00 0.00 0.00 2.12
2764 3109 2.332063 AGATGCGGTGTTCCCAATAG 57.668 50.000 0.00 0.00 0.00 1.73
2766 3111 1.923356 AAAGATGCGGTGTTCCCAAT 58.077 45.000 0.00 0.00 0.00 3.16
2767 3112 1.698506 AAAAGATGCGGTGTTCCCAA 58.301 45.000 0.00 0.00 0.00 4.12
2787 3136 3.946606 ACATCTGTCATCAGTCATGCAA 58.053 40.909 0.00 0.00 41.91 4.08
2788 3137 3.622166 ACATCTGTCATCAGTCATGCA 57.378 42.857 0.00 0.00 41.91 3.96
2789 3138 3.688185 ACAACATCTGTCATCAGTCATGC 59.312 43.478 0.00 0.00 41.91 4.06
2790 3139 5.180680 ACAACAACATCTGTCATCAGTCATG 59.819 40.000 0.00 0.00 41.91 3.07
2801 3150 6.449698 GGATCAAAATCACAACAACATCTGT 58.550 36.000 0.00 0.00 34.90 3.41
2806 3155 5.128499 ACTTGGGATCAAAATCACAACAACA 59.872 36.000 0.00 0.00 45.99 3.33
2823 3172 1.383799 CTTGGGCATGGACTTGGGA 59.616 57.895 0.00 0.00 0.00 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.