Multiple sequence alignment - TraesCS1A01G431700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G431700 chr1A 100.000 2708 0 0 1 2708 583897352 583894645 0.000000e+00 5001.0
1 TraesCS1A01G431700 chr1A 84.887 311 41 5 425 731 86643325 86643017 2.620000e-80 309.0
2 TraesCS1A01G431700 chr1A 86.175 217 19 1 213 418 583895526 583895742 9.760000e-55 224.0
3 TraesCS1A01G431700 chr1A 86.175 217 19 1 1611 1827 583896935 583897140 9.760000e-55 224.0
4 TraesCS1A01G431700 chr1D 90.234 1280 74 22 730 1997 486196049 486197289 0.000000e+00 1624.0
5 TraesCS1A01G431700 chr1D 91.396 616 37 10 2099 2707 486158207 486157601 0.000000e+00 830.0
6 TraesCS1A01G431700 chr1D 83.755 277 22 13 2087 2358 486245389 486245131 9.690000e-60 241.0
7 TraesCS1A01G431700 chr1D 81.068 206 20 3 213 418 486197124 486196938 2.170000e-31 147.0
8 TraesCS1A01G431700 chr1D 94.595 37 1 1 1996 2032 486196061 486196026 3.770000e-04 56.5
9 TraesCS1A01G431700 chr1B 89.515 1154 90 14 764 1914 677130902 677132027 0.000000e+00 1432.0
10 TraesCS1A01G431700 chr1B 91.599 619 43 4 2099 2708 677093694 677093076 0.000000e+00 846.0
11 TraesCS1A01G431700 chr1B 90.038 261 22 2 2102 2358 677257723 677257463 4.320000e-88 335.0
12 TraesCS1A01G431700 chr1B 79.048 210 35 8 214 418 677131955 677131750 4.700000e-28 135.0
13 TraesCS1A01G431700 chr5D 85.577 312 43 2 426 735 65117455 65117144 2.600000e-85 326.0
14 TraesCS1A01G431700 chr5D 83.819 309 41 5 427 732 256701341 256701039 4.410000e-73 285.0
15 TraesCS1A01G431700 chr3D 85.948 306 41 1 426 729 475868469 475868774 2.600000e-85 326.0
16 TraesCS1A01G431700 chr7A 84.691 307 41 5 426 729 503216922 503216619 4.380000e-78 302.0
17 TraesCS1A01G431700 chr4A 83.117 308 47 5 425 729 491719855 491720160 2.660000e-70 276.0
18 TraesCS1A01G431700 chr2A 83.172 309 45 5 426 729 240785885 240785579 2.660000e-70 276.0
19 TraesCS1A01G431700 chr7D 82.958 311 45 7 425 731 182834072 182833766 9.550000e-70 274.0
20 TraesCS1A01G431700 chr3A 80.449 312 55 5 425 733 585478806 585478498 1.620000e-57 233.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G431700 chr1A 583894645 583897352 2707 True 5001 5001 100.000 1 2708 1 chr1A.!!$R2 2707
1 TraesCS1A01G431700 chr1A 583895526 583897140 1614 False 224 224 86.175 213 1827 2 chr1A.!!$F1 1614
2 TraesCS1A01G431700 chr1D 486196049 486197289 1240 False 1624 1624 90.234 730 1997 1 chr1D.!!$F1 1267
3 TraesCS1A01G431700 chr1D 486157601 486158207 606 True 830 830 91.396 2099 2707 1 chr1D.!!$R1 608
4 TraesCS1A01G431700 chr1B 677130902 677132027 1125 False 1432 1432 89.515 764 1914 1 chr1B.!!$F1 1150
5 TraesCS1A01G431700 chr1B 677093076 677093694 618 True 846 846 91.599 2099 2708 1 chr1B.!!$R1 609

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
749 761 0.179018 AGCCGATTTATGGGGTGCTC 60.179 55.0 0.0 0.0 35.01 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2386 3309 0.036388 TTGAGAAGTCGGCCATGTCC 60.036 55.0 2.24 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.634163 GTGTTAATTAATTCACCGGAAAGATTT 57.366 29.630 9.46 8.39 36.43 2.17
27 28 9.632807 TGTTAATTAATTCACCGGAAAGATTTG 57.367 29.630 9.46 0.00 36.43 2.32
28 29 9.083080 GTTAATTAATTCACCGGAAAGATTTGG 57.917 33.333 9.46 0.00 36.43 3.28
29 30 7.475137 AATTAATTCACCGGAAAGATTTGGA 57.525 32.000 9.46 0.00 36.43 3.53
30 31 6.902771 TTAATTCACCGGAAAGATTTGGAA 57.097 33.333 9.46 0.00 36.43 3.53
31 32 5.799827 AATTCACCGGAAAGATTTGGAAA 57.200 34.783 9.46 0.00 36.43 3.13
32 33 4.846779 TTCACCGGAAAGATTTGGAAAG 57.153 40.909 9.46 0.00 0.00 2.62
33 34 3.827722 TCACCGGAAAGATTTGGAAAGT 58.172 40.909 9.46 0.00 0.00 2.66
34 35 3.568007 TCACCGGAAAGATTTGGAAAGTG 59.432 43.478 9.46 0.00 0.00 3.16
35 36 2.296190 ACCGGAAAGATTTGGAAAGTGC 59.704 45.455 9.46 0.00 0.00 4.40
36 37 2.558359 CCGGAAAGATTTGGAAAGTGCT 59.442 45.455 0.00 0.00 0.00 4.40
37 38 3.756434 CCGGAAAGATTTGGAAAGTGCTA 59.244 43.478 0.00 0.00 0.00 3.49
38 39 4.142600 CCGGAAAGATTTGGAAAGTGCTAG 60.143 45.833 0.00 0.00 0.00 3.42
39 40 4.455877 CGGAAAGATTTGGAAAGTGCTAGT 59.544 41.667 0.00 0.00 0.00 2.57
40 41 5.390991 CGGAAAGATTTGGAAAGTGCTAGTC 60.391 44.000 0.00 0.00 0.00 2.59
41 42 5.707764 GGAAAGATTTGGAAAGTGCTAGTCT 59.292 40.000 0.00 0.00 0.00 3.24
42 43 6.128145 GGAAAGATTTGGAAAGTGCTAGTCTC 60.128 42.308 0.00 0.00 0.00 3.36
43 44 4.837972 AGATTTGGAAAGTGCTAGTCTCC 58.162 43.478 0.00 0.00 0.00 3.71
44 45 4.534103 AGATTTGGAAAGTGCTAGTCTCCT 59.466 41.667 0.00 0.00 0.00 3.69
45 46 3.963428 TTGGAAAGTGCTAGTCTCCTC 57.037 47.619 0.00 0.00 0.00 3.71
46 47 3.176924 TGGAAAGTGCTAGTCTCCTCT 57.823 47.619 0.00 0.00 0.00 3.69
47 48 4.317530 TGGAAAGTGCTAGTCTCCTCTA 57.682 45.455 0.00 0.00 0.00 2.43
48 49 4.673968 TGGAAAGTGCTAGTCTCCTCTAA 58.326 43.478 0.00 0.00 0.00 2.10
49 50 5.273208 TGGAAAGTGCTAGTCTCCTCTAAT 58.727 41.667 0.00 0.00 0.00 1.73
50 51 5.361285 TGGAAAGTGCTAGTCTCCTCTAATC 59.639 44.000 0.00 0.00 0.00 1.75
51 52 5.221362 GGAAAGTGCTAGTCTCCTCTAATCC 60.221 48.000 0.00 0.00 0.00 3.01
52 53 4.528076 AGTGCTAGTCTCCTCTAATCCA 57.472 45.455 0.00 0.00 0.00 3.41
53 54 5.073437 AGTGCTAGTCTCCTCTAATCCAT 57.927 43.478 0.00 0.00 0.00 3.41
54 55 6.207509 AGTGCTAGTCTCCTCTAATCCATA 57.792 41.667 0.00 0.00 0.00 2.74
55 56 6.799827 AGTGCTAGTCTCCTCTAATCCATAT 58.200 40.000 0.00 0.00 0.00 1.78
56 57 7.934313 AGTGCTAGTCTCCTCTAATCCATATA 58.066 38.462 0.00 0.00 0.00 0.86
57 58 8.565239 AGTGCTAGTCTCCTCTAATCCATATAT 58.435 37.037 0.00 0.00 0.00 0.86
58 59 9.196139 GTGCTAGTCTCCTCTAATCCATATATT 57.804 37.037 0.00 0.00 0.00 1.28
95 96 3.923017 GCTGACAAGCTTAACCACATT 57.077 42.857 0.00 0.00 46.60 2.71
96 97 4.243007 GCTGACAAGCTTAACCACATTT 57.757 40.909 0.00 0.00 46.60 2.32
97 98 5.371115 GCTGACAAGCTTAACCACATTTA 57.629 39.130 0.00 0.00 46.60 1.40
98 99 5.768317 GCTGACAAGCTTAACCACATTTAA 58.232 37.500 0.00 0.00 46.60 1.52
99 100 6.389906 GCTGACAAGCTTAACCACATTTAAT 58.610 36.000 0.00 0.00 46.60 1.40
100 101 6.868339 GCTGACAAGCTTAACCACATTTAATT 59.132 34.615 0.00 0.00 46.60 1.40
101 102 7.384932 GCTGACAAGCTTAACCACATTTAATTT 59.615 33.333 0.00 0.00 46.60 1.82
102 103 8.586570 TGACAAGCTTAACCACATTTAATTTG 57.413 30.769 0.00 0.00 0.00 2.32
103 104 8.417106 TGACAAGCTTAACCACATTTAATTTGA 58.583 29.630 0.00 0.00 0.00 2.69
104 105 9.423061 GACAAGCTTAACCACATTTAATTTGAT 57.577 29.630 0.00 0.00 0.00 2.57
105 106 9.777297 ACAAGCTTAACCACATTTAATTTGATT 57.223 25.926 0.00 0.00 0.00 2.57
137 138 9.620259 AAAATCAAAAGCCATAACTTTAAACCA 57.380 25.926 0.00 0.00 38.92 3.67
138 139 9.620259 AAATCAAAAGCCATAACTTTAAACCAA 57.380 25.926 0.00 0.00 38.92 3.67
139 140 9.620259 AATCAAAAGCCATAACTTTAAACCAAA 57.380 25.926 0.00 0.00 38.92 3.28
140 141 8.426881 TCAAAAGCCATAACTTTAAACCAAAC 57.573 30.769 0.00 0.00 38.92 2.93
141 142 8.041323 TCAAAAGCCATAACTTTAAACCAAACA 58.959 29.630 0.00 0.00 38.92 2.83
142 143 8.835439 CAAAAGCCATAACTTTAAACCAAACAT 58.165 29.630 0.00 0.00 38.92 2.71
143 144 8.601845 AAAGCCATAACTTTAAACCAAACATC 57.398 30.769 0.00 0.00 38.09 3.06
144 145 6.386654 AGCCATAACTTTAAACCAAACATCG 58.613 36.000 0.00 0.00 0.00 3.84
145 146 5.575218 GCCATAACTTTAAACCAAACATCGG 59.425 40.000 0.00 0.00 0.00 4.18
146 147 6.570764 GCCATAACTTTAAACCAAACATCGGA 60.571 38.462 0.00 0.00 0.00 4.55
147 148 7.371936 CCATAACTTTAAACCAAACATCGGAA 58.628 34.615 0.00 0.00 0.00 4.30
148 149 8.032451 CCATAACTTTAAACCAAACATCGGAAT 58.968 33.333 0.00 0.00 0.00 3.01
149 150 9.418045 CATAACTTTAAACCAAACATCGGAATT 57.582 29.630 0.00 0.00 0.00 2.17
152 153 9.471084 AACTTTAAACCAAACATCGGAATTAAG 57.529 29.630 0.00 0.00 0.00 1.85
153 154 8.852135 ACTTTAAACCAAACATCGGAATTAAGA 58.148 29.630 0.00 0.00 0.00 2.10
154 155 9.855021 CTTTAAACCAAACATCGGAATTAAGAT 57.145 29.630 0.00 0.00 0.00 2.40
155 156 9.849166 TTTAAACCAAACATCGGAATTAAGATC 57.151 29.630 0.00 0.00 0.00 2.75
156 157 7.703058 AAACCAAACATCGGAATTAAGATCT 57.297 32.000 0.00 0.00 0.00 2.75
157 158 8.801882 AAACCAAACATCGGAATTAAGATCTA 57.198 30.769 0.00 0.00 0.00 1.98
158 159 8.980481 AACCAAACATCGGAATTAAGATCTAT 57.020 30.769 0.00 0.00 0.00 1.98
159 160 8.980481 ACCAAACATCGGAATTAAGATCTATT 57.020 30.769 0.00 0.00 0.00 1.73
160 161 9.408648 ACCAAACATCGGAATTAAGATCTATTT 57.591 29.630 0.00 0.00 0.00 1.40
167 168 9.774413 ATCGGAATTAAGATCTATTTTAACCGT 57.226 29.630 16.80 7.59 33.59 4.83
168 169 9.603921 TCGGAATTAAGATCTATTTTAACCGTT 57.396 29.630 16.80 0.00 33.59 4.44
169 170 9.646336 CGGAATTAAGATCTATTTTAACCGTTG 57.354 33.333 0.00 0.00 30.26 4.10
170 171 9.946165 GGAATTAAGATCTATTTTAACCGTTGG 57.054 33.333 0.00 0.00 0.00 3.77
175 176 7.803279 AGATCTATTTTAACCGTTGGAATCC 57.197 36.000 0.00 0.00 0.00 3.01
176 177 7.574607 AGATCTATTTTAACCGTTGGAATCCT 58.425 34.615 0.00 0.00 0.00 3.24
177 178 7.715686 AGATCTATTTTAACCGTTGGAATCCTC 59.284 37.037 0.00 0.00 0.00 3.71
178 179 6.713276 TCTATTTTAACCGTTGGAATCCTCA 58.287 36.000 0.00 0.00 0.00 3.86
179 180 5.638596 ATTTTAACCGTTGGAATCCTCAC 57.361 39.130 0.00 0.00 0.00 3.51
180 181 3.773418 TTAACCGTTGGAATCCTCACA 57.227 42.857 0.00 0.00 0.00 3.58
181 182 2.649531 AACCGTTGGAATCCTCACAA 57.350 45.000 0.00 0.00 0.00 3.33
182 183 2.879103 ACCGTTGGAATCCTCACAAT 57.121 45.000 0.00 0.00 0.00 2.71
183 184 2.436417 ACCGTTGGAATCCTCACAATG 58.564 47.619 0.00 0.00 0.00 2.82
184 185 2.224769 ACCGTTGGAATCCTCACAATGT 60.225 45.455 0.00 0.00 31.03 2.71
185 186 2.162208 CCGTTGGAATCCTCACAATGTG 59.838 50.000 7.12 7.12 34.45 3.21
186 187 2.813754 CGTTGGAATCCTCACAATGTGT 59.186 45.455 13.55 0.00 34.79 3.72
187 188 3.253188 CGTTGGAATCCTCACAATGTGTT 59.747 43.478 13.55 0.00 34.79 3.32
188 189 4.613622 CGTTGGAATCCTCACAATGTGTTC 60.614 45.833 13.55 9.28 34.79 3.18
189 190 4.371624 TGGAATCCTCACAATGTGTTCT 57.628 40.909 13.55 0.00 34.79 3.01
190 191 4.728772 TGGAATCCTCACAATGTGTTCTT 58.271 39.130 13.55 3.48 34.79 2.52
191 192 5.139727 TGGAATCCTCACAATGTGTTCTTT 58.860 37.500 13.55 3.99 34.79 2.52
192 193 5.009911 TGGAATCCTCACAATGTGTTCTTTG 59.990 40.000 13.55 0.00 34.79 2.77
193 194 5.241506 GGAATCCTCACAATGTGTTCTTTGA 59.758 40.000 13.55 3.08 34.79 2.69
194 195 6.239008 GGAATCCTCACAATGTGTTCTTTGAA 60.239 38.462 13.55 0.00 34.79 2.69
195 196 6.713762 ATCCTCACAATGTGTTCTTTGAAA 57.286 33.333 13.55 0.00 34.79 2.69
196 197 5.890334 TCCTCACAATGTGTTCTTTGAAAC 58.110 37.500 13.55 0.00 34.79 2.78
197 198 5.652014 TCCTCACAATGTGTTCTTTGAAACT 59.348 36.000 13.55 0.00 34.79 2.66
198 199 6.826231 TCCTCACAATGTGTTCTTTGAAACTA 59.174 34.615 13.55 0.00 34.79 2.24
199 200 7.012327 TCCTCACAATGTGTTCTTTGAAACTAG 59.988 37.037 13.55 0.00 34.79 2.57
200 201 7.012327 CCTCACAATGTGTTCTTTGAAACTAGA 59.988 37.037 13.55 0.00 34.79 2.43
201 202 8.450578 TCACAATGTGTTCTTTGAAACTAGAT 57.549 30.769 13.55 0.00 34.79 1.98
202 203 8.902806 TCACAATGTGTTCTTTGAAACTAGATT 58.097 29.630 13.55 0.00 34.79 2.40
203 204 9.173939 CACAATGTGTTCTTTGAAACTAGATTC 57.826 33.333 5.00 5.82 34.30 2.52
204 205 8.352942 ACAATGTGTTCTTTGAAACTAGATTCC 58.647 33.333 9.96 0.00 34.30 3.01
205 206 6.539649 TGTGTTCTTTGAAACTAGATTCCG 57.460 37.500 9.96 0.11 0.00 4.30
206 207 5.049680 TGTGTTCTTTGAAACTAGATTCCGC 60.050 40.000 9.96 1.73 0.00 5.54
207 208 5.049680 GTGTTCTTTGAAACTAGATTCCGCA 60.050 40.000 9.96 0.00 0.00 5.69
208 209 5.705441 TGTTCTTTGAAACTAGATTCCGCAT 59.295 36.000 9.96 0.00 0.00 4.73
209 210 5.801350 TCTTTGAAACTAGATTCCGCATG 57.199 39.130 9.96 0.00 0.00 4.06
210 211 5.487433 TCTTTGAAACTAGATTCCGCATGA 58.513 37.500 9.96 0.88 0.00 3.07
211 212 5.582269 TCTTTGAAACTAGATTCCGCATGAG 59.418 40.000 9.96 0.00 0.00 2.90
220 221 3.197766 AGATTCCGCATGAGTCTAAACCA 59.802 43.478 0.00 0.00 38.20 3.67
245 246 6.747931 TGGAAATAAAGCCCCTAAAAGGTAT 58.252 36.000 0.00 0.00 31.93 2.73
253 254 8.854237 AAAGCCCCTAAAAGGTATGAAAATAT 57.146 30.769 0.00 0.00 31.93 1.28
254 255 7.839680 AGCCCCTAAAAGGTATGAAAATATG 57.160 36.000 0.00 0.00 31.93 1.78
277 278 7.936496 TGAAACATGGATAATAGAAAGCACA 57.064 32.000 0.00 0.00 0.00 4.57
287 288 2.907910 AGAAAGCACACAATCGATGC 57.092 45.000 0.00 0.00 39.74 3.91
309 321 4.262249 GCTAAGTCCCCTAGAAGCTACATG 60.262 50.000 0.00 0.00 0.00 3.21
315 327 3.242867 CCCTAGAAGCTACATGGATGGA 58.757 50.000 0.00 0.00 0.00 3.41
326 338 1.629353 CATGGATGGATCAGCTAGCCT 59.371 52.381 12.13 0.00 34.18 4.58
329 341 0.612744 GATGGATCAGCTAGCCTCCC 59.387 60.000 20.18 13.64 33.51 4.30
366 378 4.687215 TCCACAGCTCCTGCACGC 62.687 66.667 0.00 0.00 42.74 5.34
382 394 1.745087 CACGCACTTGCCCATAATCTT 59.255 47.619 0.00 0.00 37.91 2.40
385 397 2.223340 CGCACTTGCCCATAATCTTCAC 60.223 50.000 0.00 0.00 37.91 3.18
392 404 3.197766 TGCCCATAATCTTCACGAAGTCT 59.802 43.478 6.68 0.00 41.61 3.24
408 420 2.879462 CTTCGTCGCTGTACCCGC 60.879 66.667 0.00 0.00 0.00 6.13
418 430 4.832608 GTACCCGCCCTTGAGCCG 62.833 72.222 0.00 0.00 0.00 5.52
421 433 4.489771 CCCGCCCTTGAGCCGATT 62.490 66.667 0.00 0.00 0.00 3.34
422 434 2.438434 CCGCCCTTGAGCCGATTT 60.438 61.111 0.00 0.00 0.00 2.17
423 435 2.764314 CCGCCCTTGAGCCGATTTG 61.764 63.158 0.00 0.00 0.00 2.32
425 437 0.742990 CGCCCTTGAGCCGATTTGTA 60.743 55.000 0.00 0.00 0.00 2.41
426 438 1.017387 GCCCTTGAGCCGATTTGTAG 58.983 55.000 0.00 0.00 0.00 2.74
428 440 1.668419 CCTTGAGCCGATTTGTAGGG 58.332 55.000 0.00 0.00 0.00 3.53
433 445 3.478540 GCCGATTTGTAGGGCTTCT 57.521 52.632 0.00 0.00 43.52 2.85
434 446 1.751437 GCCGATTTGTAGGGCTTCTT 58.249 50.000 0.00 0.00 43.52 2.52
435 447 2.092323 GCCGATTTGTAGGGCTTCTTT 58.908 47.619 0.00 0.00 43.52 2.52
436 448 2.159379 GCCGATTTGTAGGGCTTCTTTG 60.159 50.000 0.00 0.00 43.52 2.77
437 449 3.343617 CCGATTTGTAGGGCTTCTTTGA 58.656 45.455 0.00 0.00 0.00 2.69
438 450 3.947834 CCGATTTGTAGGGCTTCTTTGAT 59.052 43.478 0.00 0.00 0.00 2.57
439 451 4.399303 CCGATTTGTAGGGCTTCTTTGATT 59.601 41.667 0.00 0.00 0.00 2.57
440 452 5.105756 CCGATTTGTAGGGCTTCTTTGATTT 60.106 40.000 0.00 0.00 0.00 2.17
441 453 6.094881 CCGATTTGTAGGGCTTCTTTGATTTA 59.905 38.462 0.00 0.00 0.00 1.40
442 454 7.362574 CCGATTTGTAGGGCTTCTTTGATTTAA 60.363 37.037 0.00 0.00 0.00 1.52
443 455 8.026607 CGATTTGTAGGGCTTCTTTGATTTAAA 58.973 33.333 0.00 0.00 0.00 1.52
444 456 9.358872 GATTTGTAGGGCTTCTTTGATTTAAAG 57.641 33.333 0.00 0.00 45.77 1.85
445 457 6.834168 TGTAGGGCTTCTTTGATTTAAAGG 57.166 37.500 1.56 0.00 44.75 3.11
446 458 6.548321 TGTAGGGCTTCTTTGATTTAAAGGA 58.452 36.000 1.56 0.00 44.75 3.36
447 459 7.007723 TGTAGGGCTTCTTTGATTTAAAGGAA 58.992 34.615 1.56 0.00 44.75 3.36
448 460 7.673926 TGTAGGGCTTCTTTGATTTAAAGGAAT 59.326 33.333 1.56 0.00 44.75 3.01
449 461 7.559335 AGGGCTTCTTTGATTTAAAGGAATT 57.441 32.000 1.56 0.00 44.75 2.17
450 462 7.977818 AGGGCTTCTTTGATTTAAAGGAATTT 58.022 30.769 1.56 0.00 44.75 1.82
451 463 8.439971 AGGGCTTCTTTGATTTAAAGGAATTTT 58.560 29.630 1.56 0.00 44.75 1.82
452 464 9.719355 GGGCTTCTTTGATTTAAAGGAATTTTA 57.281 29.630 1.56 0.00 44.75 1.52
586 598 9.679661 TTTATAGAAAATCTAACATGCACTCCA 57.320 29.630 0.00 0.00 31.96 3.86
587 599 9.679661 TTATAGAAAATCTAACATGCACTCCAA 57.320 29.630 0.00 0.00 31.96 3.53
588 600 6.259550 AGAAAATCTAACATGCACTCCAAC 57.740 37.500 0.00 0.00 0.00 3.77
589 601 5.183904 AGAAAATCTAACATGCACTCCAACC 59.816 40.000 0.00 0.00 0.00 3.77
590 602 4.307032 AATCTAACATGCACTCCAACCT 57.693 40.909 0.00 0.00 0.00 3.50
591 603 3.788227 TCTAACATGCACTCCAACCTT 57.212 42.857 0.00 0.00 0.00 3.50
592 604 4.098914 TCTAACATGCACTCCAACCTTT 57.901 40.909 0.00 0.00 0.00 3.11
593 605 4.469657 TCTAACATGCACTCCAACCTTTT 58.530 39.130 0.00 0.00 0.00 2.27
594 606 4.892934 TCTAACATGCACTCCAACCTTTTT 59.107 37.500 0.00 0.00 0.00 1.94
618 630 8.751302 TTTTACGATTCCTTTATTTTTCCTGC 57.249 30.769 0.00 0.00 0.00 4.85
619 631 4.981794 ACGATTCCTTTATTTTTCCTGCG 58.018 39.130 0.00 0.00 0.00 5.18
620 632 4.457949 ACGATTCCTTTATTTTTCCTGCGT 59.542 37.500 0.00 0.00 0.00 5.24
621 633 5.028375 CGATTCCTTTATTTTTCCTGCGTC 58.972 41.667 0.00 0.00 0.00 5.19
622 634 5.391523 CGATTCCTTTATTTTTCCTGCGTCA 60.392 40.000 0.00 0.00 0.00 4.35
623 635 5.975693 TTCCTTTATTTTTCCTGCGTCAT 57.024 34.783 0.00 0.00 0.00 3.06
624 636 5.560966 TCCTTTATTTTTCCTGCGTCATC 57.439 39.130 0.00 0.00 0.00 2.92
625 637 5.007034 TCCTTTATTTTTCCTGCGTCATCA 58.993 37.500 0.00 0.00 0.00 3.07
626 638 5.475220 TCCTTTATTTTTCCTGCGTCATCAA 59.525 36.000 0.00 0.00 0.00 2.57
627 639 6.015856 TCCTTTATTTTTCCTGCGTCATCAAA 60.016 34.615 0.00 0.00 0.00 2.69
628 640 6.089417 CCTTTATTTTTCCTGCGTCATCAAAC 59.911 38.462 0.00 0.00 0.00 2.93
629 641 4.582701 ATTTTTCCTGCGTCATCAAACA 57.417 36.364 0.00 0.00 0.00 2.83
630 642 3.347958 TTTTCCTGCGTCATCAAACAC 57.652 42.857 0.00 0.00 0.00 3.32
631 643 2.254546 TTCCTGCGTCATCAAACACT 57.745 45.000 0.00 0.00 0.00 3.55
632 644 1.795768 TCCTGCGTCATCAAACACTC 58.204 50.000 0.00 0.00 0.00 3.51
633 645 1.069978 TCCTGCGTCATCAAACACTCA 59.930 47.619 0.00 0.00 0.00 3.41
634 646 2.079158 CCTGCGTCATCAAACACTCAT 58.921 47.619 0.00 0.00 0.00 2.90
635 647 2.485426 CCTGCGTCATCAAACACTCATT 59.515 45.455 0.00 0.00 0.00 2.57
636 648 3.485633 CTGCGTCATCAAACACTCATTG 58.514 45.455 0.00 0.00 0.00 2.82
637 649 2.245096 GCGTCATCAAACACTCATTGC 58.755 47.619 0.00 0.00 0.00 3.56
638 650 2.095567 GCGTCATCAAACACTCATTGCT 60.096 45.455 0.00 0.00 0.00 3.91
639 651 3.125146 GCGTCATCAAACACTCATTGCTA 59.875 43.478 0.00 0.00 0.00 3.49
640 652 4.378356 GCGTCATCAAACACTCATTGCTAA 60.378 41.667 0.00 0.00 0.00 3.09
641 653 5.674569 GCGTCATCAAACACTCATTGCTAAT 60.675 40.000 0.00 0.00 0.00 1.73
642 654 5.961843 CGTCATCAAACACTCATTGCTAATC 59.038 40.000 0.00 0.00 0.00 1.75
643 655 6.183360 CGTCATCAAACACTCATTGCTAATCT 60.183 38.462 0.00 0.00 0.00 2.40
644 656 7.010460 CGTCATCAAACACTCATTGCTAATCTA 59.990 37.037 0.00 0.00 0.00 1.98
645 657 8.668353 GTCATCAAACACTCATTGCTAATCTAA 58.332 33.333 0.00 0.00 0.00 2.10
646 658 9.399797 TCATCAAACACTCATTGCTAATCTAAT 57.600 29.630 0.00 0.00 0.00 1.73
649 661 9.330063 TCAAACACTCATTGCTAATCTAATAGG 57.670 33.333 0.00 0.00 0.00 2.57
650 662 9.330063 CAAACACTCATTGCTAATCTAATAGGA 57.670 33.333 0.00 0.00 0.00 2.94
653 665 9.717942 ACACTCATTGCTAATCTAATAGGATTC 57.282 33.333 0.00 0.00 37.20 2.52
654 666 9.716531 CACTCATTGCTAATCTAATAGGATTCA 57.283 33.333 0.00 0.00 37.20 2.57
660 672 8.868522 TGCTAATCTAATAGGATTCAAATGGG 57.131 34.615 0.00 0.00 37.20 4.00
661 673 7.394359 TGCTAATCTAATAGGATTCAAATGGGC 59.606 37.037 0.00 0.00 37.20 5.36
662 674 7.394359 GCTAATCTAATAGGATTCAAATGGGCA 59.606 37.037 0.00 0.00 37.20 5.36
663 675 9.471702 CTAATCTAATAGGATTCAAATGGGCAT 57.528 33.333 0.00 0.00 37.20 4.40
665 677 8.814038 ATCTAATAGGATTCAAATGGGCATAC 57.186 34.615 0.00 0.00 0.00 2.39
666 678 7.754624 TCTAATAGGATTCAAATGGGCATACA 58.245 34.615 0.00 0.00 0.00 2.29
667 679 8.224025 TCTAATAGGATTCAAATGGGCATACAA 58.776 33.333 0.00 0.00 0.00 2.41
668 680 6.655078 ATAGGATTCAAATGGGCATACAAC 57.345 37.500 0.00 0.00 0.00 3.32
669 681 4.613437 AGGATTCAAATGGGCATACAACT 58.387 39.130 0.00 0.00 0.00 3.16
670 682 5.025453 AGGATTCAAATGGGCATACAACTT 58.975 37.500 0.00 0.00 0.00 2.66
671 683 5.484998 AGGATTCAAATGGGCATACAACTTT 59.515 36.000 0.00 0.00 0.00 2.66
672 684 6.667414 AGGATTCAAATGGGCATACAACTTTA 59.333 34.615 0.00 0.00 0.00 1.85
673 685 7.180051 AGGATTCAAATGGGCATACAACTTTAA 59.820 33.333 0.00 0.00 0.00 1.52
674 686 7.277760 GGATTCAAATGGGCATACAACTTTAAC 59.722 37.037 0.00 0.00 0.00 2.01
675 687 6.031751 TCAAATGGGCATACAACTTTAACC 57.968 37.500 0.00 0.00 0.00 2.85
676 688 5.777732 TCAAATGGGCATACAACTTTAACCT 59.222 36.000 0.00 0.00 0.00 3.50
677 689 6.268847 TCAAATGGGCATACAACTTTAACCTT 59.731 34.615 0.00 0.00 0.00 3.50
678 690 7.451877 TCAAATGGGCATACAACTTTAACCTTA 59.548 33.333 0.00 0.00 0.00 2.69
679 691 7.971368 AATGGGCATACAACTTTAACCTTAT 57.029 32.000 0.00 0.00 0.00 1.73
680 692 9.482175 AAATGGGCATACAACTTTAACCTTATA 57.518 29.630 0.00 0.00 0.00 0.98
681 693 7.868906 TGGGCATACAACTTTAACCTTATAC 57.131 36.000 0.00 0.00 0.00 1.47
682 694 7.635648 TGGGCATACAACTTTAACCTTATACT 58.364 34.615 0.00 0.00 0.00 2.12
683 695 8.110908 TGGGCATACAACTTTAACCTTATACTT 58.889 33.333 0.00 0.00 0.00 2.24
684 696 8.963725 GGGCATACAACTTTAACCTTATACTTT 58.036 33.333 0.00 0.00 0.00 2.66
710 722 7.982371 CGTATTACTACGTTCTCAAAATCCT 57.018 36.000 0.00 0.00 44.49 3.24
712 724 8.951969 CGTATTACTACGTTCTCAAAATCCTAC 58.048 37.037 0.00 0.00 44.49 3.18
713 725 7.982371 ATTACTACGTTCTCAAAATCCTACG 57.018 36.000 0.00 0.00 35.34 3.51
714 726 5.633830 ACTACGTTCTCAAAATCCTACGA 57.366 39.130 0.00 0.00 33.60 3.43
715 727 6.017400 ACTACGTTCTCAAAATCCTACGAA 57.983 37.500 0.00 0.00 33.60 3.85
716 728 6.628185 ACTACGTTCTCAAAATCCTACGAAT 58.372 36.000 0.00 0.00 33.60 3.34
717 729 6.750963 ACTACGTTCTCAAAATCCTACGAATC 59.249 38.462 0.00 0.00 33.60 2.52
718 730 5.475719 ACGTTCTCAAAATCCTACGAATCA 58.524 37.500 0.00 0.00 33.60 2.57
719 731 5.929992 ACGTTCTCAAAATCCTACGAATCAA 59.070 36.000 0.00 0.00 33.60 2.57
720 732 6.425721 ACGTTCTCAAAATCCTACGAATCAAA 59.574 34.615 0.00 0.00 33.60 2.69
721 733 6.955963 CGTTCTCAAAATCCTACGAATCAAAG 59.044 38.462 0.00 0.00 0.00 2.77
722 734 7.148639 CGTTCTCAAAATCCTACGAATCAAAGA 60.149 37.037 0.00 0.00 0.00 2.52
723 735 8.669243 GTTCTCAAAATCCTACGAATCAAAGAT 58.331 33.333 0.00 0.00 0.00 2.40
724 736 8.201554 TCTCAAAATCCTACGAATCAAAGATG 57.798 34.615 0.00 0.00 0.00 2.90
725 737 6.785191 TCAAAATCCTACGAATCAAAGATGC 58.215 36.000 0.00 0.00 0.00 3.91
726 738 5.757850 AAATCCTACGAATCAAAGATGCC 57.242 39.130 0.00 0.00 0.00 4.40
727 739 3.194005 TCCTACGAATCAAAGATGCCC 57.806 47.619 0.00 0.00 0.00 5.36
728 740 2.771943 TCCTACGAATCAAAGATGCCCT 59.228 45.455 0.00 0.00 0.00 5.19
735 747 0.908910 TCAAAGATGCCCTTAGCCGA 59.091 50.000 0.00 0.00 42.71 5.54
737 749 2.092429 TCAAAGATGCCCTTAGCCGATT 60.092 45.455 0.00 0.00 42.71 3.34
738 750 2.689983 CAAAGATGCCCTTAGCCGATTT 59.310 45.455 0.00 0.00 42.71 2.17
749 761 0.179018 AGCCGATTTATGGGGTGCTC 60.179 55.000 0.00 0.00 35.01 4.26
750 762 1.507141 GCCGATTTATGGGGTGCTCG 61.507 60.000 0.00 0.00 0.00 5.03
751 763 0.179056 CCGATTTATGGGGTGCTCGT 60.179 55.000 0.00 0.00 0.00 4.18
753 765 1.472552 CGATTTATGGGGTGCTCGTGA 60.473 52.381 0.00 0.00 0.00 4.35
834 846 8.948631 TGCTAGTAACAGAATAATCAAGAAGG 57.051 34.615 0.00 0.00 0.00 3.46
918 931 2.572209 TTAGTAAAACCTGCCGGCTT 57.428 45.000 29.70 15.78 0.00 4.35
944 967 4.692625 CCTTAGTGTCACTTGTCAAGGATG 59.307 45.833 20.87 7.14 0.00 3.51
969 992 1.675552 ATAAATTTGAGGCCGGTCGG 58.324 50.000 1.90 4.85 38.57 4.79
992 1015 3.324117 CACTCATCCACTCAGACACAAG 58.676 50.000 0.00 0.00 0.00 3.16
998 1021 4.623932 TCCACTCAGACACAAGCTAAAT 57.376 40.909 0.00 0.00 0.00 1.40
1081 1165 4.680237 CAGCCGGCGTGAGGTTCA 62.680 66.667 23.20 0.00 0.00 3.18
1082 1166 4.681978 AGCCGGCGTGAGGTTCAC 62.682 66.667 23.20 0.00 43.65 3.18
1146 1230 2.108362 GAGGAATACGGCGTGGGG 59.892 66.667 24.86 0.00 0.00 4.96
1431 1638 1.115930 AGCAGGACACGAACCAGACT 61.116 55.000 0.00 0.00 0.00 3.24
1453 1690 1.006758 ACAGTTGGATCTACGAGGGGA 59.993 52.381 0.00 0.00 0.00 4.81
1455 1692 2.036475 CAGTTGGATCTACGAGGGGATG 59.964 54.545 0.00 0.00 0.00 3.51
1718 2607 3.094062 GCGGCTAGCTGACCCATCA 62.094 63.158 27.93 0.00 44.04 3.07
1728 2617 3.053395 AGCTGACCCATCAATGTATTGGT 60.053 43.478 4.89 0.00 38.30 3.67
1729 2618 3.067180 GCTGACCCATCAATGTATTGGTG 59.933 47.826 10.22 10.22 45.97 4.17
1730 2619 3.023119 TGACCCATCAATGTATTGGTGC 58.977 45.455 11.45 0.98 45.25 5.01
1731 2620 3.290710 GACCCATCAATGTATTGGTGCT 58.709 45.455 11.45 0.42 45.25 4.40
1732 2621 3.701040 GACCCATCAATGTATTGGTGCTT 59.299 43.478 11.45 1.76 45.25 3.91
1733 2622 3.701040 ACCCATCAATGTATTGGTGCTTC 59.299 43.478 11.45 0.00 45.25 3.86
1734 2623 3.956199 CCCATCAATGTATTGGTGCTTCT 59.044 43.478 11.45 0.00 45.25 2.85
1761 2650 2.919228 AGGGGACTTAACATCGATTGC 58.081 47.619 0.00 0.00 37.44 3.56
1784 2673 6.128035 TGCGTGCTTACTATCATTCATGTTTT 60.128 34.615 0.00 0.00 0.00 2.43
1834 2748 5.722021 TTTCCAAGGTTTAGAGCAAATCC 57.278 39.130 0.00 0.00 0.00 3.01
1849 2763 4.141181 AGCAAATCCAGTAGATGCCCAATA 60.141 41.667 0.00 0.00 34.56 1.90
1856 2770 7.865530 TCCAGTAGATGCCCAATAAGTATAA 57.134 36.000 0.00 0.00 0.00 0.98
1958 2872 6.116126 GCATAGAAACACCATTCTAACTCCT 58.884 40.000 1.33 0.00 43.20 3.69
1976 2890 9.396022 CTAACTCCTGTTTCACACCATAATAAT 57.604 33.333 0.00 0.00 37.59 1.28
1979 2893 9.747898 ACTCCTGTTTCACACCATAATAATTTA 57.252 29.630 0.00 0.00 0.00 1.40
2001 2915 9.900710 ATTTAAACGTTTGTATTTAGCATGTCA 57.099 25.926 23.46 0.00 0.00 3.58
2002 2916 9.900710 TTTAAACGTTTGTATTTAGCATGTCAT 57.099 25.926 23.46 0.00 0.00 3.06
2003 2917 9.549509 TTAAACGTTTGTATTTAGCATGTCATC 57.450 29.630 23.46 0.00 0.00 2.92
2004 2918 5.795766 ACGTTTGTATTTAGCATGTCATCG 58.204 37.500 0.00 0.00 0.00 3.84
2005 2919 5.197549 CGTTTGTATTTAGCATGTCATCGG 58.802 41.667 0.00 0.00 0.00 4.18
2006 2920 4.811555 TTGTATTTAGCATGTCATCGGC 57.188 40.909 0.00 0.00 0.00 5.54
2007 2921 4.071961 TGTATTTAGCATGTCATCGGCT 57.928 40.909 3.41 3.41 41.51 5.52
2008 2922 5.208463 TGTATTTAGCATGTCATCGGCTA 57.792 39.130 1.65 1.65 39.01 3.93
2009 2923 4.988540 TGTATTTAGCATGTCATCGGCTAC 59.011 41.667 4.73 0.00 39.65 3.58
2010 2924 2.526304 TTAGCATGTCATCGGCTACC 57.474 50.000 4.73 0.00 39.65 3.18
2011 2925 1.408969 TAGCATGTCATCGGCTACCA 58.591 50.000 1.65 0.00 39.01 3.25
2012 2926 0.541392 AGCATGTCATCGGCTACCAA 59.459 50.000 0.00 0.00 35.82 3.67
2013 2927 0.657840 GCATGTCATCGGCTACCAAC 59.342 55.000 0.00 0.00 0.00 3.77
2014 2928 1.743772 GCATGTCATCGGCTACCAACT 60.744 52.381 0.00 0.00 0.00 3.16
2015 2929 1.935873 CATGTCATCGGCTACCAACTG 59.064 52.381 0.00 0.00 0.00 3.16
2016 2930 1.262417 TGTCATCGGCTACCAACTGA 58.738 50.000 0.00 0.00 0.00 3.41
2017 2931 1.831106 TGTCATCGGCTACCAACTGAT 59.169 47.619 0.00 0.00 33.31 2.90
2018 2932 2.159099 TGTCATCGGCTACCAACTGATC 60.159 50.000 0.00 0.00 30.58 2.92
2019 2933 1.067060 TCATCGGCTACCAACTGATCG 59.933 52.381 0.00 0.00 30.58 3.69
2020 2934 1.067060 CATCGGCTACCAACTGATCGA 59.933 52.381 0.00 0.00 30.58 3.59
2021 2935 1.399714 TCGGCTACCAACTGATCGAT 58.600 50.000 0.00 0.00 0.00 3.59
2022 2936 1.337071 TCGGCTACCAACTGATCGATC 59.663 52.381 18.72 18.72 0.00 3.69
2023 2937 1.067060 CGGCTACCAACTGATCGATCA 59.933 52.381 25.80 25.80 35.16 2.92
2024 2938 2.288457 CGGCTACCAACTGATCGATCAT 60.288 50.000 27.43 15.25 36.02 2.45
2025 2939 3.733337 GGCTACCAACTGATCGATCATT 58.267 45.455 27.43 19.77 36.02 2.57
2026 2940 3.496130 GGCTACCAACTGATCGATCATTG 59.504 47.826 27.43 26.93 36.02 2.82
2027 2941 4.122776 GCTACCAACTGATCGATCATTGT 58.877 43.478 27.43 19.70 36.02 2.71
2028 2942 4.210120 GCTACCAACTGATCGATCATTGTC 59.790 45.833 27.43 15.91 36.02 3.18
2029 2943 4.478206 ACCAACTGATCGATCATTGTCT 57.522 40.909 27.43 16.08 36.02 3.41
2030 2944 4.186926 ACCAACTGATCGATCATTGTCTG 58.813 43.478 27.43 19.63 36.02 3.51
2031 2945 4.186926 CCAACTGATCGATCATTGTCTGT 58.813 43.478 27.43 17.62 36.02 3.41
2032 2946 4.633126 CCAACTGATCGATCATTGTCTGTT 59.367 41.667 27.43 21.88 36.02 3.16
2033 2947 5.812127 CCAACTGATCGATCATTGTCTGTTA 59.188 40.000 27.43 1.65 36.02 2.41
2034 2948 6.237942 CCAACTGATCGATCATTGTCTGTTAC 60.238 42.308 27.43 0.00 36.02 2.50
2035 2949 5.965922 ACTGATCGATCATTGTCTGTTACA 58.034 37.500 27.43 1.59 36.02 2.41
2069 2983 8.607441 AGAAAGAAGAAACAATTAAAATGGCC 57.393 30.769 0.00 0.00 0.00 5.36
2070 2984 7.384932 AGAAAGAAGAAACAATTAAAATGGCCG 59.615 33.333 0.00 0.00 0.00 6.13
2071 2985 6.096673 AGAAGAAACAATTAAAATGGCCGT 57.903 33.333 0.00 0.00 0.00 5.68
2072 2986 6.156519 AGAAGAAACAATTAAAATGGCCGTC 58.843 36.000 0.00 0.00 0.00 4.79
2073 2987 4.816392 AGAAACAATTAAAATGGCCGTCC 58.184 39.130 0.00 0.00 0.00 4.79
2074 2988 2.931512 ACAATTAAAATGGCCGTCCG 57.068 45.000 0.00 0.00 34.14 4.79
2075 2989 1.474879 ACAATTAAAATGGCCGTCCGG 59.525 47.619 0.00 0.24 38.57 5.14
2085 2999 3.203442 CCGTCCGGCAGCTAGTTA 58.797 61.111 0.00 0.00 0.00 2.24
2086 3000 1.514087 CCGTCCGGCAGCTAGTTAA 59.486 57.895 0.00 0.00 0.00 2.01
2087 3001 0.108520 CCGTCCGGCAGCTAGTTAAA 60.109 55.000 0.00 0.00 0.00 1.52
2088 3002 0.997196 CGTCCGGCAGCTAGTTAAAC 59.003 55.000 0.00 0.00 0.00 2.01
2089 3003 1.670674 CGTCCGGCAGCTAGTTAAACA 60.671 52.381 0.00 0.00 0.00 2.83
2090 3004 2.419667 GTCCGGCAGCTAGTTAAACAA 58.580 47.619 0.00 0.00 0.00 2.83
2091 3005 2.159037 GTCCGGCAGCTAGTTAAACAAC 59.841 50.000 0.00 0.00 0.00 3.32
2092 3006 1.467342 CCGGCAGCTAGTTAAACAACC 59.533 52.381 0.00 0.00 0.00 3.77
2093 3007 1.127951 CGGCAGCTAGTTAAACAACCG 59.872 52.381 0.00 0.00 0.00 4.44
2094 3008 1.467342 GGCAGCTAGTTAAACAACCGG 59.533 52.381 0.00 0.00 0.00 5.28
2095 3009 2.419667 GCAGCTAGTTAAACAACCGGA 58.580 47.619 9.46 0.00 0.00 5.14
2096 3010 2.159037 GCAGCTAGTTAAACAACCGGAC 59.841 50.000 9.46 0.00 0.00 4.79
2097 3011 3.395639 CAGCTAGTTAAACAACCGGACA 58.604 45.455 9.46 0.00 0.00 4.02
2103 3017 5.900865 AGTTAAACAACCGGACAAAGAAA 57.099 34.783 9.46 0.00 0.00 2.52
2165 3080 8.514330 TCACCAACATATAATCAGGTTAAACC 57.486 34.615 0.00 0.00 38.99 3.27
2201 3121 0.037303 CAGCCACCATCAGGACAAGT 59.963 55.000 0.00 0.00 38.69 3.16
2216 3136 2.029288 AAGTGTGTCATCCGCTGCG 61.029 57.895 16.34 16.34 0.00 5.18
2341 3264 2.346099 GCTAGCAGCTCTAGAATCCG 57.654 55.000 10.63 0.00 46.12 4.18
2353 3276 2.393271 AGAATCCGCAGAAGTCCTTG 57.607 50.000 0.00 0.00 0.00 3.61
2360 3283 1.437625 GCAGAAGTCCTTGAGCTCAC 58.562 55.000 18.03 4.74 0.00 3.51
2386 3309 0.734253 CGTCCTCGTTCCTGAGCTTG 60.734 60.000 0.00 0.00 34.56 4.01
2437 3360 1.069513 CACTCCTTGGACACGTGGTAA 59.930 52.381 21.57 10.53 0.00 2.85
2515 3438 1.302033 CAGCACACGCCCTTCTCTT 60.302 57.895 0.00 0.00 39.83 2.85
2622 3545 1.668151 GGGTCACGTCCTGCAGTTC 60.668 63.158 13.81 4.14 0.00 3.01
2627 3550 1.013596 CACGTCCTGCAGTTCAAACA 58.986 50.000 13.81 0.00 0.00 2.83
2642 3565 2.158813 TCAAACACCCTTCAGACAGACC 60.159 50.000 0.00 0.00 0.00 3.85
2659 3582 3.001330 CAGACCTATTCGCCGTTCAAATC 59.999 47.826 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.634163 AAATCTTTCCGGTGAATTAATTAACAC 57.366 29.630 16.11 12.99 0.00 3.32
1 2 9.632807 CAAATCTTTCCGGTGAATTAATTAACA 57.367 29.630 16.11 2.20 0.00 2.41
2 3 9.083080 CCAAATCTTTCCGGTGAATTAATTAAC 57.917 33.333 7.11 7.11 0.00 2.01
3 4 9.026121 TCCAAATCTTTCCGGTGAATTAATTAA 57.974 29.630 0.00 0.00 0.00 1.40
4 5 8.582657 TCCAAATCTTTCCGGTGAATTAATTA 57.417 30.769 0.00 0.00 0.00 1.40
5 6 7.475137 TCCAAATCTTTCCGGTGAATTAATT 57.525 32.000 0.00 0.00 0.00 1.40
6 7 7.475137 TTCCAAATCTTTCCGGTGAATTAAT 57.525 32.000 0.00 0.00 0.00 1.40
7 8 6.902771 TTCCAAATCTTTCCGGTGAATTAA 57.097 33.333 0.00 0.00 0.00 1.40
8 9 6.492087 ACTTTCCAAATCTTTCCGGTGAATTA 59.508 34.615 0.00 0.00 0.00 1.40
9 10 5.304357 ACTTTCCAAATCTTTCCGGTGAATT 59.696 36.000 0.00 0.00 0.00 2.17
10 11 4.832823 ACTTTCCAAATCTTTCCGGTGAAT 59.167 37.500 0.00 0.00 0.00 2.57
11 12 4.037446 CACTTTCCAAATCTTTCCGGTGAA 59.963 41.667 0.00 0.00 0.00 3.18
12 13 3.568007 CACTTTCCAAATCTTTCCGGTGA 59.432 43.478 0.00 0.00 0.00 4.02
13 14 3.857010 GCACTTTCCAAATCTTTCCGGTG 60.857 47.826 0.00 0.00 0.00 4.94
14 15 2.296190 GCACTTTCCAAATCTTTCCGGT 59.704 45.455 0.00 0.00 0.00 5.28
15 16 2.558359 AGCACTTTCCAAATCTTTCCGG 59.442 45.455 0.00 0.00 0.00 5.14
16 17 3.923017 AGCACTTTCCAAATCTTTCCG 57.077 42.857 0.00 0.00 0.00 4.30
17 18 5.707764 AGACTAGCACTTTCCAAATCTTTCC 59.292 40.000 0.00 0.00 0.00 3.13
18 19 6.128145 GGAGACTAGCACTTTCCAAATCTTTC 60.128 42.308 0.00 0.00 0.00 2.62
19 20 5.707764 GGAGACTAGCACTTTCCAAATCTTT 59.292 40.000 0.00 0.00 0.00 2.52
20 21 5.013599 AGGAGACTAGCACTTTCCAAATCTT 59.986 40.000 0.00 0.00 40.61 2.40
21 22 4.534103 AGGAGACTAGCACTTTCCAAATCT 59.466 41.667 0.00 0.00 40.61 2.40
22 23 4.837972 AGGAGACTAGCACTTTCCAAATC 58.162 43.478 0.00 0.00 40.61 2.17
23 24 4.534103 AGAGGAGACTAGCACTTTCCAAAT 59.466 41.667 0.00 0.00 44.43 2.32
24 25 3.904339 AGAGGAGACTAGCACTTTCCAAA 59.096 43.478 0.00 0.00 44.43 3.28
25 26 3.511477 AGAGGAGACTAGCACTTTCCAA 58.489 45.455 0.00 0.00 44.43 3.53
26 27 3.176924 AGAGGAGACTAGCACTTTCCA 57.823 47.619 0.00 0.00 44.43 3.53
27 28 5.221362 GGATTAGAGGAGACTAGCACTTTCC 60.221 48.000 0.00 0.00 44.43 3.13
28 29 5.361285 TGGATTAGAGGAGACTAGCACTTTC 59.639 44.000 0.00 0.00 44.43 2.62
29 30 5.273208 TGGATTAGAGGAGACTAGCACTTT 58.727 41.667 0.00 0.00 44.43 2.66
30 31 4.873010 TGGATTAGAGGAGACTAGCACTT 58.127 43.478 0.00 0.00 44.43 3.16
31 32 4.528076 TGGATTAGAGGAGACTAGCACT 57.472 45.455 0.00 0.00 44.43 4.40
32 33 8.760980 ATATATGGATTAGAGGAGACTAGCAC 57.239 38.462 0.00 0.00 44.43 4.40
76 77 8.702438 CAAATTAAATGTGGTTAAGCTTGTCAG 58.298 33.333 9.86 0.00 0.00 3.51
77 78 8.417106 TCAAATTAAATGTGGTTAAGCTTGTCA 58.583 29.630 9.86 1.54 0.00 3.58
78 79 8.810652 TCAAATTAAATGTGGTTAAGCTTGTC 57.189 30.769 9.86 1.51 0.00 3.18
79 80 9.777297 AATCAAATTAAATGTGGTTAAGCTTGT 57.223 25.926 9.86 0.00 0.00 3.16
111 112 9.620259 TGGTTTAAAGTTATGGCTTTTGATTTT 57.380 25.926 0.00 0.00 39.22 1.82
112 113 9.620259 TTGGTTTAAAGTTATGGCTTTTGATTT 57.380 25.926 0.00 0.00 39.22 2.17
113 114 9.620259 TTTGGTTTAAAGTTATGGCTTTTGATT 57.380 25.926 0.00 0.00 39.22 2.57
114 115 9.051679 GTTTGGTTTAAAGTTATGGCTTTTGAT 57.948 29.630 0.00 0.00 39.22 2.57
115 116 8.041323 TGTTTGGTTTAAAGTTATGGCTTTTGA 58.959 29.630 0.00 0.00 39.22 2.69
116 117 8.202745 TGTTTGGTTTAAAGTTATGGCTTTTG 57.797 30.769 0.00 0.00 39.22 2.44
117 118 8.972458 ATGTTTGGTTTAAAGTTATGGCTTTT 57.028 26.923 0.00 0.00 39.22 2.27
118 119 7.383843 CGATGTTTGGTTTAAAGTTATGGCTTT 59.616 33.333 0.00 0.00 41.13 3.51
119 120 6.866248 CGATGTTTGGTTTAAAGTTATGGCTT 59.134 34.615 0.00 0.00 0.00 4.35
120 121 6.386654 CGATGTTTGGTTTAAAGTTATGGCT 58.613 36.000 0.00 0.00 0.00 4.75
121 122 5.575218 CCGATGTTTGGTTTAAAGTTATGGC 59.425 40.000 0.00 0.00 0.00 4.40
122 123 6.915349 TCCGATGTTTGGTTTAAAGTTATGG 58.085 36.000 0.00 0.00 0.00 2.74
123 124 8.980143 ATTCCGATGTTTGGTTTAAAGTTATG 57.020 30.769 0.00 0.00 0.00 1.90
126 127 9.471084 CTTAATTCCGATGTTTGGTTTAAAGTT 57.529 29.630 0.00 0.00 0.00 2.66
127 128 8.852135 TCTTAATTCCGATGTTTGGTTTAAAGT 58.148 29.630 0.00 0.00 0.00 2.66
128 129 9.855021 ATCTTAATTCCGATGTTTGGTTTAAAG 57.145 29.630 0.00 0.00 0.00 1.85
129 130 9.849166 GATCTTAATTCCGATGTTTGGTTTAAA 57.151 29.630 0.00 0.00 0.00 1.52
130 131 9.238368 AGATCTTAATTCCGATGTTTGGTTTAA 57.762 29.630 0.00 0.00 0.00 1.52
131 132 8.801882 AGATCTTAATTCCGATGTTTGGTTTA 57.198 30.769 0.00 0.00 0.00 2.01
132 133 7.703058 AGATCTTAATTCCGATGTTTGGTTT 57.297 32.000 0.00 0.00 0.00 3.27
133 134 8.980481 ATAGATCTTAATTCCGATGTTTGGTT 57.020 30.769 0.00 0.00 0.00 3.67
134 135 8.980481 AATAGATCTTAATTCCGATGTTTGGT 57.020 30.769 0.00 0.00 0.00 3.67
141 142 9.774413 ACGGTTAAAATAGATCTTAATTCCGAT 57.226 29.630 16.86 5.15 33.59 4.18
142 143 9.603921 AACGGTTAAAATAGATCTTAATTCCGA 57.396 29.630 16.86 0.00 33.59 4.55
143 144 9.646336 CAACGGTTAAAATAGATCTTAATTCCG 57.354 33.333 0.00 7.44 34.92 4.30
144 145 9.946165 CCAACGGTTAAAATAGATCTTAATTCC 57.054 33.333 0.00 0.00 0.00 3.01
149 150 9.333724 GGATTCCAACGGTTAAAATAGATCTTA 57.666 33.333 0.00 0.00 0.00 2.10
150 151 8.053355 AGGATTCCAACGGTTAAAATAGATCTT 58.947 33.333 0.00 0.00 0.00 2.40
151 152 7.574607 AGGATTCCAACGGTTAAAATAGATCT 58.425 34.615 5.29 0.00 0.00 2.75
152 153 7.497909 TGAGGATTCCAACGGTTAAAATAGATC 59.502 37.037 5.29 0.00 0.00 2.75
153 154 7.282450 GTGAGGATTCCAACGGTTAAAATAGAT 59.718 37.037 5.29 0.00 0.00 1.98
154 155 6.596497 GTGAGGATTCCAACGGTTAAAATAGA 59.404 38.462 5.29 0.00 0.00 1.98
155 156 6.373216 TGTGAGGATTCCAACGGTTAAAATAG 59.627 38.462 5.29 0.00 0.00 1.73
156 157 6.239396 TGTGAGGATTCCAACGGTTAAAATA 58.761 36.000 5.29 0.00 0.00 1.40
157 158 5.074115 TGTGAGGATTCCAACGGTTAAAAT 58.926 37.500 5.29 0.00 0.00 1.82
158 159 4.462133 TGTGAGGATTCCAACGGTTAAAA 58.538 39.130 5.29 0.00 0.00 1.52
159 160 4.088056 TGTGAGGATTCCAACGGTTAAA 57.912 40.909 5.29 0.00 0.00 1.52
160 161 3.773418 TGTGAGGATTCCAACGGTTAA 57.227 42.857 5.29 0.00 0.00 2.01
161 162 3.773418 TTGTGAGGATTCCAACGGTTA 57.227 42.857 5.29 0.00 0.00 2.85
162 163 2.649531 TTGTGAGGATTCCAACGGTT 57.350 45.000 5.29 0.00 0.00 4.44
163 164 2.224769 ACATTGTGAGGATTCCAACGGT 60.225 45.455 5.29 0.99 0.00 4.83
164 165 2.162208 CACATTGTGAGGATTCCAACGG 59.838 50.000 11.45 0.43 35.23 4.44
165 166 2.813754 ACACATTGTGAGGATTCCAACG 59.186 45.455 23.12 0.00 36.96 4.10
166 167 4.520492 AGAACACATTGTGAGGATTCCAAC 59.480 41.667 23.12 3.62 36.96 3.77
167 168 4.728772 AGAACACATTGTGAGGATTCCAA 58.271 39.130 23.12 0.00 36.96 3.53
168 169 4.371624 AGAACACATTGTGAGGATTCCA 57.628 40.909 23.12 0.00 36.96 3.53
169 170 5.241506 TCAAAGAACACATTGTGAGGATTCC 59.758 40.000 23.12 0.00 36.96 3.01
170 171 6.317789 TCAAAGAACACATTGTGAGGATTC 57.682 37.500 23.12 15.05 36.96 2.52
171 172 6.713762 TTCAAAGAACACATTGTGAGGATT 57.286 33.333 23.12 6.92 36.96 3.01
172 173 6.322201 AGTTTCAAAGAACACATTGTGAGGAT 59.678 34.615 23.12 6.36 36.96 3.24
173 174 5.652014 AGTTTCAAAGAACACATTGTGAGGA 59.348 36.000 23.12 7.94 36.96 3.71
174 175 5.894807 AGTTTCAAAGAACACATTGTGAGG 58.105 37.500 23.12 5.93 36.96 3.86
175 176 7.919690 TCTAGTTTCAAAGAACACATTGTGAG 58.080 34.615 23.12 5.51 36.96 3.51
176 177 7.857734 TCTAGTTTCAAAGAACACATTGTGA 57.142 32.000 23.12 0.00 36.96 3.58
177 178 9.173939 GAATCTAGTTTCAAAGAACACATTGTG 57.826 33.333 15.18 15.18 39.75 3.33
178 179 8.352942 GGAATCTAGTTTCAAAGAACACATTGT 58.647 33.333 14.07 0.00 31.94 2.71
179 180 7.535258 CGGAATCTAGTTTCAAAGAACACATTG 59.465 37.037 14.07 0.00 31.94 2.82
180 181 7.584987 CGGAATCTAGTTTCAAAGAACACATT 58.415 34.615 14.07 0.00 31.94 2.71
181 182 6.348540 GCGGAATCTAGTTTCAAAGAACACAT 60.349 38.462 14.07 0.00 31.94 3.21
182 183 5.049680 GCGGAATCTAGTTTCAAAGAACACA 60.050 40.000 14.07 0.00 31.94 3.72
183 184 5.049680 TGCGGAATCTAGTTTCAAAGAACAC 60.050 40.000 14.07 0.00 31.94 3.32
184 185 5.060506 TGCGGAATCTAGTTTCAAAGAACA 58.939 37.500 14.07 2.15 31.94 3.18
185 186 5.607119 TGCGGAATCTAGTTTCAAAGAAC 57.393 39.130 14.07 0.00 0.00 3.01
186 187 5.937540 TCATGCGGAATCTAGTTTCAAAGAA 59.062 36.000 14.07 2.17 0.00 2.52
187 188 5.487433 TCATGCGGAATCTAGTTTCAAAGA 58.513 37.500 14.07 3.65 0.00 2.52
188 189 5.352569 ACTCATGCGGAATCTAGTTTCAAAG 59.647 40.000 14.07 7.05 0.00 2.77
189 190 5.245531 ACTCATGCGGAATCTAGTTTCAAA 58.754 37.500 14.07 1.50 0.00 2.69
190 191 4.832248 ACTCATGCGGAATCTAGTTTCAA 58.168 39.130 14.07 1.80 0.00 2.69
191 192 4.160439 AGACTCATGCGGAATCTAGTTTCA 59.840 41.667 14.07 0.00 0.00 2.69
192 193 4.688021 AGACTCATGCGGAATCTAGTTTC 58.312 43.478 5.15 5.15 0.00 2.78
193 194 4.744795 AGACTCATGCGGAATCTAGTTT 57.255 40.909 0.00 0.00 0.00 2.66
194 195 5.854010 TTAGACTCATGCGGAATCTAGTT 57.146 39.130 0.00 0.00 0.00 2.24
195 196 5.452077 GGTTTAGACTCATGCGGAATCTAGT 60.452 44.000 0.00 0.00 0.00 2.57
196 197 4.985409 GGTTTAGACTCATGCGGAATCTAG 59.015 45.833 0.00 0.00 0.00 2.43
197 198 4.404394 TGGTTTAGACTCATGCGGAATCTA 59.596 41.667 0.00 0.00 0.00 1.98
198 199 3.197766 TGGTTTAGACTCATGCGGAATCT 59.802 43.478 0.00 0.00 0.00 2.40
199 200 3.531538 TGGTTTAGACTCATGCGGAATC 58.468 45.455 0.00 0.00 0.00 2.52
200 201 3.627395 TGGTTTAGACTCATGCGGAAT 57.373 42.857 0.00 0.00 0.00 3.01
201 202 3.270027 CATGGTTTAGACTCATGCGGAA 58.730 45.455 0.00 0.00 32.01 4.30
202 203 2.419990 CCATGGTTTAGACTCATGCGGA 60.420 50.000 2.57 0.00 35.19 5.54
203 204 1.942657 CCATGGTTTAGACTCATGCGG 59.057 52.381 2.57 0.00 35.19 5.69
204 205 2.905075 TCCATGGTTTAGACTCATGCG 58.095 47.619 12.58 0.00 35.19 4.73
205 206 5.841957 ATTTCCATGGTTTAGACTCATGC 57.158 39.130 12.58 0.00 35.19 4.06
206 207 7.917505 GCTTTATTTCCATGGTTTAGACTCATG 59.082 37.037 12.58 7.47 35.75 3.07
207 208 7.068716 GGCTTTATTTCCATGGTTTAGACTCAT 59.931 37.037 12.58 0.00 0.00 2.90
208 209 6.377146 GGCTTTATTTCCATGGTTTAGACTCA 59.623 38.462 12.58 0.00 0.00 3.41
209 210 6.183360 GGGCTTTATTTCCATGGTTTAGACTC 60.183 42.308 12.58 0.00 0.00 3.36
210 211 5.656859 GGGCTTTATTTCCATGGTTTAGACT 59.343 40.000 12.58 0.00 0.00 3.24
211 212 5.163447 GGGGCTTTATTTCCATGGTTTAGAC 60.163 44.000 12.58 4.19 0.00 2.59
220 221 5.599751 ACCTTTTAGGGGCTTTATTTCCAT 58.400 37.500 0.00 0.00 40.58 3.41
253 254 7.392953 TGTGTGCTTTCTATTATCCATGTTTCA 59.607 33.333 0.00 0.00 0.00 2.69
254 255 7.761409 TGTGTGCTTTCTATTATCCATGTTTC 58.239 34.615 0.00 0.00 0.00 2.78
262 263 6.794158 GCATCGATTGTGTGCTTTCTATTATC 59.206 38.462 0.00 0.00 36.02 1.75
265 266 4.637534 AGCATCGATTGTGTGCTTTCTATT 59.362 37.500 4.65 0.00 46.29 1.73
270 271 3.753272 ACTTAGCATCGATTGTGTGCTTT 59.247 39.130 15.06 0.00 46.29 3.51
277 278 2.119495 AGGGGACTTAGCATCGATTGT 58.881 47.619 0.00 0.00 37.44 2.71
287 288 4.282195 CCATGTAGCTTCTAGGGGACTTAG 59.718 50.000 0.00 0.00 43.67 2.18
309 321 0.612744 GGAGGCTAGCTGATCCATCC 59.387 60.000 21.70 12.12 0.00 3.51
315 327 2.324541 CAAGTAGGGAGGCTAGCTGAT 58.675 52.381 15.72 0.51 0.00 2.90
326 338 2.508300 GGATTACAAGGCCAAGTAGGGA 59.492 50.000 5.01 0.00 38.09 4.20
329 341 3.433740 GGAGGGATTACAAGGCCAAGTAG 60.434 52.174 5.01 0.00 0.00 2.57
366 378 3.270027 TCGTGAAGATTATGGGCAAGTG 58.730 45.455 0.00 0.00 0.00 3.16
408 420 1.668419 CCTACAAATCGGCTCAAGGG 58.332 55.000 0.00 0.00 0.00 3.95
418 430 9.358872 CTTTAAATCAAAGAAGCCCTACAAATC 57.641 33.333 0.00 0.00 45.62 2.17
419 431 8.314021 CCTTTAAATCAAAGAAGCCCTACAAAT 58.686 33.333 0.00 0.00 45.62 2.32
421 433 7.007723 TCCTTTAAATCAAAGAAGCCCTACAA 58.992 34.615 0.00 0.00 45.62 2.41
422 434 6.548321 TCCTTTAAATCAAAGAAGCCCTACA 58.452 36.000 0.00 0.00 45.62 2.74
423 435 7.462571 TTCCTTTAAATCAAAGAAGCCCTAC 57.537 36.000 0.00 0.00 45.62 3.18
425 437 7.559335 AATTCCTTTAAATCAAAGAAGCCCT 57.441 32.000 0.00 0.00 45.62 5.19
426 438 8.621532 AAAATTCCTTTAAATCAAAGAAGCCC 57.378 30.769 0.00 0.00 45.62 5.19
560 572 9.679661 TGGAGTGCATGTTAGATTTTCTATAAA 57.320 29.630 0.00 0.00 0.00 1.40
561 573 9.679661 TTGGAGTGCATGTTAGATTTTCTATAA 57.320 29.630 0.00 0.00 0.00 0.98
562 574 9.109393 GTTGGAGTGCATGTTAGATTTTCTATA 57.891 33.333 0.00 0.00 0.00 1.31
563 575 7.067494 GGTTGGAGTGCATGTTAGATTTTCTAT 59.933 37.037 0.00 0.00 0.00 1.98
564 576 6.374333 GGTTGGAGTGCATGTTAGATTTTCTA 59.626 38.462 0.00 0.00 0.00 2.10
565 577 5.183904 GGTTGGAGTGCATGTTAGATTTTCT 59.816 40.000 0.00 0.00 0.00 2.52
566 578 5.183904 AGGTTGGAGTGCATGTTAGATTTTC 59.816 40.000 0.00 0.00 0.00 2.29
567 579 5.079643 AGGTTGGAGTGCATGTTAGATTTT 58.920 37.500 0.00 0.00 0.00 1.82
568 580 4.666512 AGGTTGGAGTGCATGTTAGATTT 58.333 39.130 0.00 0.00 0.00 2.17
569 581 4.307032 AGGTTGGAGTGCATGTTAGATT 57.693 40.909 0.00 0.00 0.00 2.40
570 582 4.307032 AAGGTTGGAGTGCATGTTAGAT 57.693 40.909 0.00 0.00 0.00 1.98
571 583 3.788227 AAGGTTGGAGTGCATGTTAGA 57.212 42.857 0.00 0.00 0.00 2.10
572 584 4.853924 AAAAGGTTGGAGTGCATGTTAG 57.146 40.909 0.00 0.00 0.00 2.34
592 604 9.198837 GCAGGAAAAATAAAGGAATCGTAAAAA 57.801 29.630 0.00 0.00 0.00 1.94
593 605 7.539366 CGCAGGAAAAATAAAGGAATCGTAAAA 59.461 33.333 0.00 0.00 0.00 1.52
594 606 7.024768 CGCAGGAAAAATAAAGGAATCGTAAA 58.975 34.615 0.00 0.00 0.00 2.01
595 607 6.149807 ACGCAGGAAAAATAAAGGAATCGTAA 59.850 34.615 0.00 0.00 0.00 3.18
596 608 5.644636 ACGCAGGAAAAATAAAGGAATCGTA 59.355 36.000 0.00 0.00 0.00 3.43
597 609 4.457949 ACGCAGGAAAAATAAAGGAATCGT 59.542 37.500 0.00 0.00 0.00 3.73
598 610 4.981794 ACGCAGGAAAAATAAAGGAATCG 58.018 39.130 0.00 0.00 0.00 3.34
599 611 5.949735 TGACGCAGGAAAAATAAAGGAATC 58.050 37.500 0.00 0.00 0.00 2.52
600 612 5.975693 TGACGCAGGAAAAATAAAGGAAT 57.024 34.783 0.00 0.00 0.00 3.01
601 613 5.475220 TGATGACGCAGGAAAAATAAAGGAA 59.525 36.000 0.00 0.00 0.00 3.36
602 614 5.007034 TGATGACGCAGGAAAAATAAAGGA 58.993 37.500 0.00 0.00 0.00 3.36
603 615 5.309323 TGATGACGCAGGAAAAATAAAGG 57.691 39.130 0.00 0.00 0.00 3.11
604 616 6.640499 TGTTTGATGACGCAGGAAAAATAAAG 59.360 34.615 0.00 0.00 0.00 1.85
605 617 6.419413 GTGTTTGATGACGCAGGAAAAATAAA 59.581 34.615 0.00 0.00 0.00 1.40
606 618 5.918011 GTGTTTGATGACGCAGGAAAAATAA 59.082 36.000 0.00 0.00 0.00 1.40
607 619 5.240623 AGTGTTTGATGACGCAGGAAAAATA 59.759 36.000 0.00 0.00 32.56 1.40
608 620 4.037923 AGTGTTTGATGACGCAGGAAAAAT 59.962 37.500 0.00 0.00 32.56 1.82
609 621 3.380004 AGTGTTTGATGACGCAGGAAAAA 59.620 39.130 0.00 0.00 32.56 1.94
610 622 2.948979 AGTGTTTGATGACGCAGGAAAA 59.051 40.909 0.00 0.00 32.56 2.29
611 623 2.548057 GAGTGTTTGATGACGCAGGAAA 59.452 45.455 0.00 0.00 32.56 3.13
612 624 2.143122 GAGTGTTTGATGACGCAGGAA 58.857 47.619 0.00 0.00 32.56 3.36
613 625 1.069978 TGAGTGTTTGATGACGCAGGA 59.930 47.619 0.00 0.00 32.56 3.86
614 626 1.511850 TGAGTGTTTGATGACGCAGG 58.488 50.000 0.00 0.00 32.56 4.85
615 627 3.485633 CAATGAGTGTTTGATGACGCAG 58.514 45.455 0.00 0.00 32.56 5.18
616 628 2.350676 GCAATGAGTGTTTGATGACGCA 60.351 45.455 0.00 0.00 32.56 5.24
617 629 2.095567 AGCAATGAGTGTTTGATGACGC 60.096 45.455 0.00 0.00 0.00 5.19
618 630 3.818961 AGCAATGAGTGTTTGATGACG 57.181 42.857 0.00 0.00 0.00 4.35
619 631 7.081526 AGATTAGCAATGAGTGTTTGATGAC 57.918 36.000 0.00 0.00 0.00 3.06
620 632 8.791327 TTAGATTAGCAATGAGTGTTTGATGA 57.209 30.769 0.00 0.00 0.00 2.92
623 635 9.330063 CCTATTAGATTAGCAATGAGTGTTTGA 57.670 33.333 0.00 0.00 0.00 2.69
624 636 9.330063 TCCTATTAGATTAGCAATGAGTGTTTG 57.670 33.333 0.00 0.00 0.00 2.93
627 639 9.717942 GAATCCTATTAGATTAGCAATGAGTGT 57.282 33.333 0.00 0.00 36.60 3.55
628 640 9.716531 TGAATCCTATTAGATTAGCAATGAGTG 57.283 33.333 0.00 0.00 36.60 3.51
634 646 9.300681 CCCATTTGAATCCTATTAGATTAGCAA 57.699 33.333 0.00 0.00 36.60 3.91
635 647 7.394359 GCCCATTTGAATCCTATTAGATTAGCA 59.606 37.037 0.00 0.00 36.60 3.49
636 648 7.394359 TGCCCATTTGAATCCTATTAGATTAGC 59.606 37.037 0.00 0.00 36.60 3.09
637 649 8.868522 TGCCCATTTGAATCCTATTAGATTAG 57.131 34.615 0.00 0.00 36.60 1.73
639 651 9.247861 GTATGCCCATTTGAATCCTATTAGATT 57.752 33.333 0.00 0.00 39.19 2.40
640 652 8.393259 TGTATGCCCATTTGAATCCTATTAGAT 58.607 33.333 0.00 0.00 0.00 1.98
641 653 7.754624 TGTATGCCCATTTGAATCCTATTAGA 58.245 34.615 0.00 0.00 0.00 2.10
642 654 8.299570 GTTGTATGCCCATTTGAATCCTATTAG 58.700 37.037 0.00 0.00 0.00 1.73
643 655 8.004215 AGTTGTATGCCCATTTGAATCCTATTA 58.996 33.333 0.00 0.00 0.00 0.98
644 656 6.840705 AGTTGTATGCCCATTTGAATCCTATT 59.159 34.615 0.00 0.00 0.00 1.73
645 657 6.376248 AGTTGTATGCCCATTTGAATCCTAT 58.624 36.000 0.00 0.00 0.00 2.57
646 658 5.765510 AGTTGTATGCCCATTTGAATCCTA 58.234 37.500 0.00 0.00 0.00 2.94
647 659 4.613437 AGTTGTATGCCCATTTGAATCCT 58.387 39.130 0.00 0.00 0.00 3.24
648 660 5.343307 AAGTTGTATGCCCATTTGAATCC 57.657 39.130 0.00 0.00 0.00 3.01
649 661 7.277760 GGTTAAAGTTGTATGCCCATTTGAATC 59.722 37.037 0.00 0.00 0.00 2.52
650 662 7.038373 AGGTTAAAGTTGTATGCCCATTTGAAT 60.038 33.333 0.00 0.00 0.00 2.57
651 663 6.268847 AGGTTAAAGTTGTATGCCCATTTGAA 59.731 34.615 0.00 0.00 0.00 2.69
652 664 5.777732 AGGTTAAAGTTGTATGCCCATTTGA 59.222 36.000 0.00 0.00 0.00 2.69
653 665 6.036577 AGGTTAAAGTTGTATGCCCATTTG 57.963 37.500 0.00 0.00 0.00 2.32
654 666 6.680148 AAGGTTAAAGTTGTATGCCCATTT 57.320 33.333 0.00 0.00 0.00 2.32
655 667 7.971368 ATAAGGTTAAAGTTGTATGCCCATT 57.029 32.000 0.00 0.00 0.00 3.16
656 668 8.279361 AGTATAAGGTTAAAGTTGTATGCCCAT 58.721 33.333 0.00 0.00 0.00 4.00
657 669 7.635648 AGTATAAGGTTAAAGTTGTATGCCCA 58.364 34.615 0.00 0.00 0.00 5.36
658 670 8.515695 AAGTATAAGGTTAAAGTTGTATGCCC 57.484 34.615 0.00 0.00 0.00 5.36
679 691 9.891828 TTTGAGAACGTAGTAATACGAAAAGTA 57.108 29.630 27.44 7.76 45.00 2.24
680 692 8.801715 TTTGAGAACGTAGTAATACGAAAAGT 57.198 30.769 27.44 8.33 45.00 2.66
683 695 8.863049 GGATTTTGAGAACGTAGTAATACGAAA 58.137 33.333 27.44 16.29 45.00 3.46
684 696 8.246180 AGGATTTTGAGAACGTAGTAATACGAA 58.754 33.333 27.44 10.87 45.00 3.85
685 697 7.765307 AGGATTTTGAGAACGTAGTAATACGA 58.235 34.615 27.44 3.40 45.00 3.43
686 698 7.982371 AGGATTTTGAGAACGTAGTAATACG 57.018 36.000 20.14 20.14 45.00 3.06
687 699 8.951969 CGTAGGATTTTGAGAACGTAGTAATAC 58.048 37.037 0.00 0.00 45.00 1.89
688 700 8.892723 TCGTAGGATTTTGAGAACGTAGTAATA 58.107 33.333 0.00 0.00 45.00 0.98
689 701 7.765307 TCGTAGGATTTTGAGAACGTAGTAAT 58.235 34.615 0.00 0.00 45.00 1.89
690 702 7.144722 TCGTAGGATTTTGAGAACGTAGTAA 57.855 36.000 0.00 0.00 45.00 2.24
691 703 6.741992 TCGTAGGATTTTGAGAACGTAGTA 57.258 37.500 0.00 0.00 45.00 1.82
693 705 6.750501 TGATTCGTAGGATTTTGAGAACGTAG 59.249 38.462 0.00 0.00 0.00 3.51
694 706 6.623486 TGATTCGTAGGATTTTGAGAACGTA 58.377 36.000 0.00 0.00 0.00 3.57
695 707 5.475719 TGATTCGTAGGATTTTGAGAACGT 58.524 37.500 0.00 0.00 0.00 3.99
696 708 6.403333 TTGATTCGTAGGATTTTGAGAACG 57.597 37.500 0.00 0.00 0.00 3.95
697 709 8.029642 TCTTTGATTCGTAGGATTTTGAGAAC 57.970 34.615 0.00 0.00 0.00 3.01
698 710 8.668353 CATCTTTGATTCGTAGGATTTTGAGAA 58.332 33.333 0.00 0.00 0.00 2.87
699 711 7.201644 GCATCTTTGATTCGTAGGATTTTGAGA 60.202 37.037 0.00 0.00 0.00 3.27
700 712 6.909357 GCATCTTTGATTCGTAGGATTTTGAG 59.091 38.462 0.00 0.00 0.00 3.02
701 713 6.183360 GGCATCTTTGATTCGTAGGATTTTGA 60.183 38.462 0.00 0.00 0.00 2.69
702 714 5.973565 GGCATCTTTGATTCGTAGGATTTTG 59.026 40.000 0.00 0.00 0.00 2.44
703 715 5.067805 GGGCATCTTTGATTCGTAGGATTTT 59.932 40.000 0.00 0.00 0.00 1.82
704 716 4.580580 GGGCATCTTTGATTCGTAGGATTT 59.419 41.667 0.00 0.00 0.00 2.17
705 717 4.137543 GGGCATCTTTGATTCGTAGGATT 58.862 43.478 0.00 0.00 0.00 3.01
706 718 3.392616 AGGGCATCTTTGATTCGTAGGAT 59.607 43.478 0.00 0.00 0.00 3.24
707 719 2.771943 AGGGCATCTTTGATTCGTAGGA 59.228 45.455 0.00 0.00 0.00 2.94
708 720 3.199880 AGGGCATCTTTGATTCGTAGG 57.800 47.619 0.00 0.00 0.00 3.18
709 721 4.212214 GCTAAGGGCATCTTTGATTCGTAG 59.788 45.833 5.10 0.00 41.35 3.51
710 722 4.127171 GCTAAGGGCATCTTTGATTCGTA 58.873 43.478 5.10 0.00 41.35 3.43
711 723 2.945668 GCTAAGGGCATCTTTGATTCGT 59.054 45.455 5.10 0.00 41.35 3.85
712 724 2.291741 GGCTAAGGGCATCTTTGATTCG 59.708 50.000 5.10 0.00 44.01 3.34
713 725 2.291741 CGGCTAAGGGCATCTTTGATTC 59.708 50.000 5.10 0.00 44.01 2.52
714 726 2.092429 TCGGCTAAGGGCATCTTTGATT 60.092 45.455 5.10 0.00 44.01 2.57
715 727 1.490490 TCGGCTAAGGGCATCTTTGAT 59.510 47.619 5.10 0.00 44.01 2.57
716 728 0.908910 TCGGCTAAGGGCATCTTTGA 59.091 50.000 5.10 0.00 44.01 2.69
717 729 1.972872 ATCGGCTAAGGGCATCTTTG 58.027 50.000 0.00 0.00 44.01 2.77
718 730 2.736670 AATCGGCTAAGGGCATCTTT 57.263 45.000 0.00 0.00 44.01 2.52
719 731 2.736670 AAATCGGCTAAGGGCATCTT 57.263 45.000 0.00 0.00 44.01 2.40
720 732 3.560025 CCATAAATCGGCTAAGGGCATCT 60.560 47.826 0.00 0.00 44.01 2.90
721 733 2.749621 CCATAAATCGGCTAAGGGCATC 59.250 50.000 0.00 0.00 44.01 3.91
722 734 2.555227 CCCATAAATCGGCTAAGGGCAT 60.555 50.000 0.00 0.00 44.01 4.40
723 735 1.202879 CCCATAAATCGGCTAAGGGCA 60.203 52.381 0.00 0.00 44.01 5.36
724 736 1.534729 CCCATAAATCGGCTAAGGGC 58.465 55.000 0.00 0.00 40.90 5.19
725 737 1.423921 ACCCCATAAATCGGCTAAGGG 59.576 52.381 0.00 0.00 39.33 3.95
726 738 2.504367 CACCCCATAAATCGGCTAAGG 58.496 52.381 0.00 0.00 0.00 2.69
727 739 1.880027 GCACCCCATAAATCGGCTAAG 59.120 52.381 0.00 0.00 0.00 2.18
728 740 1.493022 AGCACCCCATAAATCGGCTAA 59.507 47.619 0.00 0.00 0.00 3.09
735 747 1.837439 TCTCACGAGCACCCCATAAAT 59.163 47.619 0.00 0.00 0.00 1.40
737 749 0.824109 CTCTCACGAGCACCCCATAA 59.176 55.000 0.00 0.00 0.00 1.90
738 750 2.504920 CTCTCACGAGCACCCCATA 58.495 57.895 0.00 0.00 0.00 2.74
749 761 4.329801 TGCATTTGTAGTATTGCTCTCACG 59.670 41.667 0.00 0.00 36.10 4.35
750 762 5.220739 CCTGCATTTGTAGTATTGCTCTCAC 60.221 44.000 0.00 0.00 36.10 3.51
751 763 4.877823 CCTGCATTTGTAGTATTGCTCTCA 59.122 41.667 0.00 0.00 36.10 3.27
753 765 4.878397 GTCCTGCATTTGTAGTATTGCTCT 59.122 41.667 0.00 0.00 36.10 4.09
892 904 6.430000 AGCCGGCAGGTTTTACTAATATAATG 59.570 38.462 31.54 0.00 40.50 1.90
918 931 1.765904 TGACAAGTGACACTAAGGCCA 59.234 47.619 8.91 5.15 0.00 5.36
921 934 4.336889 TCCTTGACAAGTGACACTAAGG 57.663 45.455 21.63 21.63 0.00 2.69
969 992 0.610174 TGTCTGAGTGGATGAGTGGC 59.390 55.000 0.00 0.00 0.00 5.01
992 1015 6.127810 TGAAGTGCTTCATCATGATTTAGC 57.872 37.500 23.01 23.01 43.90 3.09
1018 1041 2.427506 GAGTAAGGAAGCCAACACTGG 58.572 52.381 0.00 0.00 46.65 4.00
1065 1149 4.681978 GTGAACCTCACGCCGGCT 62.682 66.667 26.68 8.92 37.67 5.52
1081 1165 2.251075 CGCGTTGTTCATTGCCGT 59.749 55.556 0.00 0.00 0.00 5.68
1082 1166 1.792057 GACGCGTTGTTCATTGCCG 60.792 57.895 15.53 0.00 0.00 5.69
1088 1172 2.024446 TCGTCGACGCGTTGTTCA 59.976 55.556 32.19 10.45 39.60 3.18
1146 1230 2.125673 ATGACCTGCACCGCGTAC 60.126 61.111 4.92 0.00 0.00 3.67
1183 1267 4.145052 GTCTGGTTGAAGATTTTCCAGGT 58.855 43.478 9.19 0.00 43.83 4.00
1184 1268 3.189287 CGTCTGGTTGAAGATTTTCCAGG 59.811 47.826 9.19 0.00 43.83 4.45
1332 1422 1.495951 GTCGCCGGTGATGTTGTTC 59.504 57.895 22.69 1.95 0.00 3.18
1431 1638 2.100197 CCCTCGTAGATCCAACTGTGA 58.900 52.381 0.00 0.00 33.89 3.58
1712 2601 3.956199 AGAAGCACCAATACATTGATGGG 59.044 43.478 3.48 2.00 40.14 4.00
1718 2607 4.338879 AGAAGCAGAAGCACCAATACATT 58.661 39.130 0.00 0.00 45.49 2.71
1728 2617 0.905357 GTCCCCTAGAAGCAGAAGCA 59.095 55.000 0.00 0.00 45.49 3.91
1729 2618 1.199615 AGTCCCCTAGAAGCAGAAGC 58.800 55.000 0.00 0.00 42.56 3.86
1730 2619 4.223032 TGTTAAGTCCCCTAGAAGCAGAAG 59.777 45.833 0.00 0.00 0.00 2.85
1731 2620 4.164981 TGTTAAGTCCCCTAGAAGCAGAA 58.835 43.478 0.00 0.00 0.00 3.02
1732 2621 3.786553 TGTTAAGTCCCCTAGAAGCAGA 58.213 45.455 0.00 0.00 0.00 4.26
1733 2622 4.698575 GATGTTAAGTCCCCTAGAAGCAG 58.301 47.826 0.00 0.00 0.00 4.24
1734 2623 3.132289 CGATGTTAAGTCCCCTAGAAGCA 59.868 47.826 0.00 0.00 0.00 3.91
1761 2650 7.243487 ACAAAACATGAATGATAGTAAGCACG 58.757 34.615 0.00 0.00 0.00 5.34
1784 2673 5.254501 AGCCCCTAAAAGGTAGGAAAATACA 59.745 40.000 0.80 0.00 36.85 2.29
1834 2748 7.680730 AGGTTATACTTATTGGGCATCTACTG 58.319 38.462 0.00 0.00 0.00 2.74
1856 2770 8.664669 AAGGTTCCAATACATATTTTTGAGGT 57.335 30.769 0.00 0.00 0.00 3.85
1928 2842 3.932545 ATGGTGTTTCTATGCGCAAAA 57.067 38.095 17.11 8.12 0.00 2.44
1976 2890 9.900710 ATGACATGCTAAATACAAACGTTTAAA 57.099 25.926 14.20 5.05 0.00 1.52
1979 2893 6.740905 CGATGACATGCTAAATACAAACGTTT 59.259 34.615 7.96 7.96 0.00 3.60
1994 2908 0.657840 GTTGGTAGCCGATGACATGC 59.342 55.000 0.00 0.00 0.00 4.06
1995 2909 1.935873 CAGTTGGTAGCCGATGACATG 59.064 52.381 0.00 0.00 0.00 3.21
1996 2910 1.831106 TCAGTTGGTAGCCGATGACAT 59.169 47.619 0.00 0.00 0.00 3.06
1997 2911 1.262417 TCAGTTGGTAGCCGATGACA 58.738 50.000 0.00 0.00 0.00 3.58
1998 2912 2.474816 GATCAGTTGGTAGCCGATGAC 58.525 52.381 0.00 0.00 0.00 3.06
1999 2913 1.067060 CGATCAGTTGGTAGCCGATGA 59.933 52.381 0.00 0.00 0.00 2.92
2000 2914 1.067060 TCGATCAGTTGGTAGCCGATG 59.933 52.381 0.00 0.00 0.00 3.84
2001 2915 1.399714 TCGATCAGTTGGTAGCCGAT 58.600 50.000 0.00 0.00 0.00 4.18
2002 2916 1.337071 GATCGATCAGTTGGTAGCCGA 59.663 52.381 20.52 0.00 0.00 5.54
2003 2917 1.067060 TGATCGATCAGTTGGTAGCCG 59.933 52.381 23.99 0.00 32.11 5.52
2004 2918 2.890808 TGATCGATCAGTTGGTAGCC 57.109 50.000 23.99 0.00 32.11 3.93
2005 2919 4.122776 ACAATGATCGATCAGTTGGTAGC 58.877 43.478 31.33 9.71 40.64 3.58
2006 2920 5.461407 CAGACAATGATCGATCAGTTGGTAG 59.539 44.000 31.33 22.20 40.64 3.18
2007 2921 5.105351 ACAGACAATGATCGATCAGTTGGTA 60.105 40.000 31.33 14.94 40.64 3.25
2008 2922 4.186926 CAGACAATGATCGATCAGTTGGT 58.813 43.478 31.33 25.27 40.64 3.67
2009 2923 4.186926 ACAGACAATGATCGATCAGTTGG 58.813 43.478 31.33 23.19 40.64 3.77
2010 2924 5.791367 AACAGACAATGATCGATCAGTTG 57.209 39.130 30.11 29.50 40.64 3.16
2011 2925 6.398095 TGTAACAGACAATGATCGATCAGTT 58.602 36.000 30.11 26.30 34.85 3.16
2012 2926 5.965922 TGTAACAGACAATGATCGATCAGT 58.034 37.500 30.11 26.22 34.85 3.41
2013 2927 6.892310 TTGTAACAGACAATGATCGATCAG 57.108 37.500 30.11 20.79 43.30 2.90
2043 2957 9.056005 GGCCATTTTAATTGTTTCTTCTTTCTT 57.944 29.630 0.00 0.00 0.00 2.52
2044 2958 7.384932 CGGCCATTTTAATTGTTTCTTCTTTCT 59.615 33.333 2.24 0.00 0.00 2.52
2045 2959 7.170828 ACGGCCATTTTAATTGTTTCTTCTTTC 59.829 33.333 2.24 0.00 0.00 2.62
2046 2960 6.989759 ACGGCCATTTTAATTGTTTCTTCTTT 59.010 30.769 2.24 0.00 0.00 2.52
2047 2961 6.521162 ACGGCCATTTTAATTGTTTCTTCTT 58.479 32.000 2.24 0.00 0.00 2.52
2048 2962 6.096673 ACGGCCATTTTAATTGTTTCTTCT 57.903 33.333 2.24 0.00 0.00 2.85
2049 2963 5.347635 GGACGGCCATTTTAATTGTTTCTTC 59.652 40.000 0.00 0.00 0.00 2.87
2050 2964 5.234752 GGACGGCCATTTTAATTGTTTCTT 58.765 37.500 0.00 0.00 0.00 2.52
2051 2965 4.617298 CGGACGGCCATTTTAATTGTTTCT 60.617 41.667 8.76 0.00 0.00 2.52
2052 2966 3.610677 CGGACGGCCATTTTAATTGTTTC 59.389 43.478 8.76 0.00 0.00 2.78
2053 2967 3.580731 CGGACGGCCATTTTAATTGTTT 58.419 40.909 8.76 0.00 0.00 2.83
2054 2968 2.094442 CCGGACGGCCATTTTAATTGTT 60.094 45.455 8.76 0.00 0.00 2.83
2055 2969 1.474879 CCGGACGGCCATTTTAATTGT 59.525 47.619 8.76 0.00 0.00 2.71
2056 2970 2.202295 CCGGACGGCCATTTTAATTG 57.798 50.000 8.76 0.00 0.00 2.32
2068 2982 0.108520 TTTAACTAGCTGCCGGACGG 60.109 55.000 5.05 6.35 38.57 4.79
2069 2983 0.997196 GTTTAACTAGCTGCCGGACG 59.003 55.000 5.05 0.00 0.00 4.79
2070 2984 2.088950 TGTTTAACTAGCTGCCGGAC 57.911 50.000 5.05 0.00 0.00 4.79
2071 2985 2.419667 GTTGTTTAACTAGCTGCCGGA 58.580 47.619 5.05 0.00 33.94 5.14
2072 2986 1.467342 GGTTGTTTAACTAGCTGCCGG 59.533 52.381 0.00 0.00 36.99 6.13
2073 2987 1.127951 CGGTTGTTTAACTAGCTGCCG 59.872 52.381 0.00 0.63 36.99 5.69
2074 2988 1.467342 CCGGTTGTTTAACTAGCTGCC 59.533 52.381 0.00 0.00 36.99 4.85
2075 2989 2.159037 GTCCGGTTGTTTAACTAGCTGC 59.841 50.000 0.00 0.00 36.99 5.25
2076 2990 3.395639 TGTCCGGTTGTTTAACTAGCTG 58.604 45.455 0.00 1.35 36.99 4.24
2077 2991 3.756933 TGTCCGGTTGTTTAACTAGCT 57.243 42.857 0.00 0.00 36.99 3.32
2078 2992 4.512571 TCTTTGTCCGGTTGTTTAACTAGC 59.487 41.667 0.00 0.00 36.99 3.42
2079 2993 6.607735 TTCTTTGTCCGGTTGTTTAACTAG 57.392 37.500 0.00 0.00 36.99 2.57
2080 2994 6.998968 TTTCTTTGTCCGGTTGTTTAACTA 57.001 33.333 0.00 0.00 36.99 2.24
2081 2995 5.900865 TTTCTTTGTCCGGTTGTTTAACT 57.099 34.783 0.00 0.00 36.99 2.24
2082 2996 6.034150 CAGTTTTCTTTGTCCGGTTGTTTAAC 59.966 38.462 0.00 0.00 36.04 2.01
2083 2997 6.072064 TCAGTTTTCTTTGTCCGGTTGTTTAA 60.072 34.615 0.00 0.00 0.00 1.52
2084 2998 5.415077 TCAGTTTTCTTTGTCCGGTTGTTTA 59.585 36.000 0.00 0.00 0.00 2.01
2085 2999 4.218852 TCAGTTTTCTTTGTCCGGTTGTTT 59.781 37.500 0.00 0.00 0.00 2.83
2086 3000 3.759618 TCAGTTTTCTTTGTCCGGTTGTT 59.240 39.130 0.00 0.00 0.00 2.83
2087 3001 3.349022 TCAGTTTTCTTTGTCCGGTTGT 58.651 40.909 0.00 0.00 0.00 3.32
2088 3002 4.364415 TTCAGTTTTCTTTGTCCGGTTG 57.636 40.909 0.00 0.00 0.00 3.77
2089 3003 5.394224 TTTTCAGTTTTCTTTGTCCGGTT 57.606 34.783 0.00 0.00 0.00 4.44
2090 3004 5.394224 TTTTTCAGTTTTCTTTGTCCGGT 57.606 34.783 0.00 0.00 0.00 5.28
2091 3005 7.995463 TTATTTTTCAGTTTTCTTTGTCCGG 57.005 32.000 0.00 0.00 0.00 5.14
2092 3006 9.296400 TCTTTATTTTTCAGTTTTCTTTGTCCG 57.704 29.630 0.00 0.00 0.00 4.79
2132 3047 9.559732 CCTGATTATATGTTGGTGAATAGACAA 57.440 33.333 0.00 0.00 0.00 3.18
2157 3072 4.263418 TGGGTACATGTACAGGGTTTAACC 60.263 45.833 31.52 21.41 37.78 2.85
2165 3080 2.485479 GGCTGATGGGTACATGTACAGG 60.485 54.545 31.52 17.11 37.47 4.00
2201 3121 1.810853 CATCGCAGCGGATGACACA 60.811 57.895 16.42 0.00 45.27 3.72
2209 3129 1.851021 TTTGAACCACATCGCAGCGG 61.851 55.000 16.42 1.60 0.00 5.52
2341 3264 1.437625 GTGAGCTCAAGGACTTCTGC 58.562 55.000 20.19 0.00 0.00 4.26
2353 3276 2.103042 GGACGTGCATGGTGAGCTC 61.103 63.158 11.36 6.82 0.00 4.09
2386 3309 0.036388 TTGAGAAGTCGGCCATGTCC 60.036 55.000 2.24 0.00 0.00 4.02
2437 3360 1.340399 TGGAGCAGATCGGAGGCATT 61.340 55.000 0.00 0.00 0.00 3.56
2622 3545 2.158755 AGGTCTGTCTGAAGGGTGTTTG 60.159 50.000 0.00 0.00 0.00 2.93
2627 3550 2.761208 CGAATAGGTCTGTCTGAAGGGT 59.239 50.000 0.00 0.00 0.00 4.34
2642 3565 3.220350 GTCGATTTGAACGGCGAATAG 57.780 47.619 16.62 3.17 34.29 1.73
2659 3582 5.625251 ACAGTTAGTTCATACAGTACGTCG 58.375 41.667 0.00 0.00 0.00 5.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.