Multiple sequence alignment - TraesCS1A01G378600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G378600 chr1A 100.000 4628 0 0 1 4628 551282152 551277525 0.000000e+00 8547.0
1 TraesCS1A01G378600 chr1A 91.613 155 13 0 3179 3333 551232767 551232613 1.010000e-51 215.0
2 TraesCS1A01G378600 chr1A 98.936 94 1 0 3087 3180 551232983 551232890 7.960000e-38 169.0
3 TraesCS1A01G378600 chr1D 95.608 2846 103 9 883 3714 458808375 458805538 0.000000e+00 4543.0
4 TraesCS1A01G378600 chr1D 86.689 293 26 7 1 289 458822231 458821948 3.480000e-81 313.0
5 TraesCS1A01G378600 chr1D 84.444 180 16 10 3711 3889 458805378 458805210 2.860000e-37 167.0
6 TraesCS1A01G378600 chr1D 73.300 397 83 19 491 871 445331508 445331119 1.750000e-24 124.0
7 TraesCS1A01G378600 chr1B 88.036 1772 142 37 2878 4628 630701483 630699761 0.000000e+00 2034.0
8 TraesCS1A01G378600 chr1B 88.933 1500 110 27 959 2441 630703265 630701805 0.000000e+00 1799.0
9 TraesCS1A01G378600 chr1B 89.189 111 6 1 3087 3191 630690419 630690309 2.910000e-27 134.0
10 TraesCS1A01G378600 chr1B 76.285 253 54 6 599 846 606360628 606360377 3.760000e-26 130.0
11 TraesCS1A01G378600 chr2D 85.915 284 35 2 2971 3254 538959584 538959306 9.730000e-77 298.0
12 TraesCS1A01G378600 chr2D 74.783 230 49 9 625 847 52579626 52579399 1.370000e-15 95.3
13 TraesCS1A01G378600 chr6D 85.159 283 35 4 2972 3254 42091855 42091580 2.730000e-72 283.0
14 TraesCS1A01G378600 chr4D 75.518 531 118 12 369 889 54280476 54281004 2.760000e-62 250.0
15 TraesCS1A01G378600 chr4D 86.290 124 12 3 3135 3253 146028349 146028226 3.760000e-26 130.0
16 TraesCS1A01G378600 chr5D 75.574 479 97 17 336 802 249996906 249997376 7.800000e-53 219.0
17 TraesCS1A01G378600 chr5B 77.062 388 73 14 322 698 489819771 489819389 4.690000e-50 209.0
18 TraesCS1A01G378600 chr5B 76.027 292 58 12 574 855 542842152 542841863 1.740000e-29 141.0
19 TraesCS1A01G378600 chr7A 76.970 330 64 11 322 645 76818163 76817840 1.320000e-40 178.0
20 TraesCS1A01G378600 chr3D 75.881 369 78 9 383 745 76394711 76394348 1.320000e-40 178.0
21 TraesCS1A01G378600 chr3D 78.488 172 32 5 681 848 562712908 562713078 1.760000e-19 108.0
22 TraesCS1A01G378600 chr4A 75.510 343 63 16 522 857 624750404 624750076 1.040000e-31 148.0
23 TraesCS1A01G378600 chr2A 76.265 257 55 6 595 846 759658867 759659122 1.040000e-26 132.0
24 TraesCS1A01G378600 chr7D 71.926 488 101 31 372 839 62201449 62201920 4.900000e-20 110.0
25 TraesCS1A01G378600 chr7B 71.082 536 122 30 322 848 629893817 629894328 2.950000e-17 100.0
26 TraesCS1A01G378600 chr7B 75.120 209 48 3 322 527 449815463 449815256 1.370000e-15 95.3
27 TraesCS1A01G378600 chr5A 71.053 532 122 27 322 846 467004152 467003646 2.950000e-17 100.0
28 TraesCS1A01G378600 chr4B 75.000 216 50 3 322 534 44370637 44370851 3.810000e-16 97.1
29 TraesCS1A01G378600 chr6A 93.220 59 4 0 4536 4594 587760879 587760937 2.290000e-13 87.9
30 TraesCS1A01G378600 chr3B 73.333 255 59 8 316 566 798110014 798110263 8.250000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G378600 chr1A 551277525 551282152 4627 True 8547.0 8547 100.0000 1 4628 1 chr1A.!!$R1 4627
1 TraesCS1A01G378600 chr1D 458805210 458808375 3165 True 2355.0 4543 90.0260 883 3889 2 chr1D.!!$R3 3006
2 TraesCS1A01G378600 chr1B 630699761 630703265 3504 True 1916.5 2034 88.4845 959 4628 2 chr1B.!!$R3 3669
3 TraesCS1A01G378600 chr4D 54280476 54281004 528 False 250.0 250 75.5180 369 889 1 chr4D.!!$F1 520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
330 331 0.033796 CACACCTGAAGGCCATGGAT 60.034 55.0 18.40 0.0 39.32 3.41 F
359 360 0.036010 ATCCTGACTCTTGCCAACGG 60.036 55.0 0.00 0.0 0.00 4.44 F
566 569 0.099791 CGGCGTTTTGTCTTTGGTGT 59.900 50.0 0.00 0.0 0.00 4.16 F
645 651 0.108472 TCTACGCTTCTCCTCGTCGA 60.108 55.0 0.00 0.0 39.79 4.20 F
741 748 0.323908 TTGCCCCGTTCCAATAAGGG 60.324 55.0 0.00 0.0 43.41 3.95 F
1020 1035 0.465705 TGCTAAGATCAGCCTTCCCG 59.534 55.0 2.82 0.0 41.04 5.14 F
2501 2529 0.863144 CGGTAAAACTGGTGTCCACG 59.137 55.0 0.00 0.0 0.00 4.94 F
3282 3311 0.321671 TTCAGAAGCTGGAAGACGGG 59.678 55.0 0.00 0.0 34.07 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2135 2162 0.041839 GCGCATGGTTTAGCTCGATG 60.042 55.000 0.30 0.0 0.00 3.84 R
2216 2243 3.084039 GTGGCATTCAGGAGATTTGTCA 58.916 45.455 0.00 0.0 0.00 3.58 R
2501 2529 8.437360 TGATGTCAGATGGTTTATGTCATTAC 57.563 34.615 0.00 0.0 0.00 1.89 R
2592 2620 0.171231 GATGAAAAGGGCAAGACCGC 59.829 55.000 0.00 0.0 40.62 5.68 R
2593 2621 0.447801 CGATGAAAAGGGCAAGACCG 59.552 55.000 0.00 0.0 40.62 4.79 R
2688 2716 1.267806 CTTCGCAAACAGTGAGGCAAT 59.732 47.619 0.00 0.0 38.15 3.56 R
3454 3483 0.037447 TTGTCCATGGCGATCACCAA 59.963 50.000 6.54 0.0 44.65 3.67 R
4404 4609 0.042581 TCCATAGCCTCCACTCCACA 59.957 55.000 0.00 0.0 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.327854 CTCATACACGCTCTTTGAAACC 57.672 45.455 0.00 0.00 0.00 3.27
22 23 3.997021 CTCATACACGCTCTTTGAAACCT 59.003 43.478 0.00 0.00 0.00 3.50
23 24 4.385825 TCATACACGCTCTTTGAAACCTT 58.614 39.130 0.00 0.00 0.00 3.50
24 25 4.819630 TCATACACGCTCTTTGAAACCTTT 59.180 37.500 0.00 0.00 0.00 3.11
25 26 3.420839 ACACGCTCTTTGAAACCTTTG 57.579 42.857 0.00 0.00 0.00 2.77
26 27 3.013921 ACACGCTCTTTGAAACCTTTGA 58.986 40.909 0.00 0.00 0.00 2.69
27 28 3.442273 ACACGCTCTTTGAAACCTTTGAA 59.558 39.130 0.00 0.00 0.00 2.69
28 29 4.097892 ACACGCTCTTTGAAACCTTTGAAT 59.902 37.500 0.00 0.00 0.00 2.57
29 30 5.043248 CACGCTCTTTGAAACCTTTGAATT 58.957 37.500 0.00 0.00 0.00 2.17
30 31 5.519927 CACGCTCTTTGAAACCTTTGAATTT 59.480 36.000 0.00 0.00 0.00 1.82
31 32 5.519927 ACGCTCTTTGAAACCTTTGAATTTG 59.480 36.000 0.00 0.00 0.00 2.32
32 33 5.050837 CGCTCTTTGAAACCTTTGAATTTGG 60.051 40.000 0.00 0.00 0.00 3.28
33 34 5.237127 GCTCTTTGAAACCTTTGAATTTGGG 59.763 40.000 0.00 0.00 0.00 4.12
34 35 6.552445 TCTTTGAAACCTTTGAATTTGGGA 57.448 33.333 0.00 0.00 0.00 4.37
35 36 6.951971 TCTTTGAAACCTTTGAATTTGGGAA 58.048 32.000 0.00 0.00 0.00 3.97
36 37 7.572814 TCTTTGAAACCTTTGAATTTGGGAAT 58.427 30.769 0.00 0.00 0.00 3.01
37 38 7.498570 TCTTTGAAACCTTTGAATTTGGGAATG 59.501 33.333 0.00 0.00 0.00 2.67
38 39 5.062528 TGAAACCTTTGAATTTGGGAATGC 58.937 37.500 0.00 0.00 0.00 3.56
39 40 4.703379 AACCTTTGAATTTGGGAATGCA 57.297 36.364 0.00 0.00 0.00 3.96
40 41 4.006780 ACCTTTGAATTTGGGAATGCAC 57.993 40.909 0.00 0.00 30.30 4.57
41 42 3.244526 ACCTTTGAATTTGGGAATGCACC 60.245 43.478 0.00 0.00 30.30 5.01
42 43 3.244491 CCTTTGAATTTGGGAATGCACCA 60.244 43.478 0.00 0.00 30.30 4.17
43 44 4.566070 CCTTTGAATTTGGGAATGCACCAT 60.566 41.667 0.00 0.00 37.93 3.55
44 45 3.613494 TGAATTTGGGAATGCACCATG 57.387 42.857 0.00 0.00 37.93 3.66
45 46 2.905085 TGAATTTGGGAATGCACCATGT 59.095 40.909 0.00 0.00 37.93 3.21
46 47 3.264104 GAATTTGGGAATGCACCATGTG 58.736 45.455 0.00 0.00 37.93 3.21
55 56 4.539152 CACCATGTGCAAGTTCGC 57.461 55.556 0.00 0.00 0.00 4.70
56 57 1.951510 CACCATGTGCAAGTTCGCT 59.048 52.632 0.00 0.00 0.00 4.93
57 58 0.311790 CACCATGTGCAAGTTCGCTT 59.688 50.000 0.00 0.00 38.09 4.68
65 66 3.642755 AAGTTCGCTTGTCCGCAG 58.357 55.556 0.00 0.00 35.84 5.18
66 67 1.227556 AAGTTCGCTTGTCCGCAGT 60.228 52.632 0.00 0.00 35.84 4.40
67 68 0.814010 AAGTTCGCTTGTCCGCAGTT 60.814 50.000 0.00 0.00 35.84 3.16
68 69 0.814010 AGTTCGCTTGTCCGCAGTTT 60.814 50.000 0.00 0.00 0.00 2.66
69 70 0.384353 GTTCGCTTGTCCGCAGTTTC 60.384 55.000 0.00 0.00 0.00 2.78
70 71 0.531974 TTCGCTTGTCCGCAGTTTCT 60.532 50.000 0.00 0.00 0.00 2.52
71 72 0.531974 TCGCTTGTCCGCAGTTTCTT 60.532 50.000 0.00 0.00 0.00 2.52
72 73 0.110644 CGCTTGTCCGCAGTTTCTTC 60.111 55.000 0.00 0.00 0.00 2.87
73 74 0.944386 GCTTGTCCGCAGTTTCTTCA 59.056 50.000 0.00 0.00 0.00 3.02
74 75 1.334149 GCTTGTCCGCAGTTTCTTCAC 60.334 52.381 0.00 0.00 0.00 3.18
75 76 2.213499 CTTGTCCGCAGTTTCTTCACT 58.787 47.619 0.00 0.00 0.00 3.41
76 77 1.581934 TGTCCGCAGTTTCTTCACTG 58.418 50.000 0.00 0.00 46.15 3.66
77 78 0.868406 GTCCGCAGTTTCTTCACTGG 59.132 55.000 3.15 0.00 43.94 4.00
78 79 0.756294 TCCGCAGTTTCTTCACTGGA 59.244 50.000 3.15 0.00 43.94 3.86
79 80 1.347707 TCCGCAGTTTCTTCACTGGAT 59.652 47.619 3.15 0.00 43.94 3.41
80 81 1.466167 CCGCAGTTTCTTCACTGGATG 59.534 52.381 3.15 0.00 43.94 3.51
81 82 2.146342 CGCAGTTTCTTCACTGGATGT 58.854 47.619 3.15 0.00 43.94 3.06
82 83 2.549754 CGCAGTTTCTTCACTGGATGTT 59.450 45.455 3.15 0.00 43.94 2.71
83 84 3.003689 CGCAGTTTCTTCACTGGATGTTT 59.996 43.478 3.15 0.00 43.94 2.83
84 85 4.293415 GCAGTTTCTTCACTGGATGTTTG 58.707 43.478 3.15 0.00 43.94 2.93
85 86 4.036734 GCAGTTTCTTCACTGGATGTTTGA 59.963 41.667 3.15 0.00 43.94 2.69
86 87 5.450412 GCAGTTTCTTCACTGGATGTTTGAA 60.450 40.000 3.15 0.00 43.94 2.69
87 88 6.204359 CAGTTTCTTCACTGGATGTTTGAAG 58.796 40.000 4.51 4.51 45.12 3.02
93 94 6.773976 TTCACTGGATGTTTGAAGAAAAGT 57.226 33.333 0.00 0.00 0.00 2.66
94 95 6.377327 TCACTGGATGTTTGAAGAAAAGTC 57.623 37.500 0.00 0.00 0.00 3.01
95 96 5.007626 TCACTGGATGTTTGAAGAAAAGTCG 59.992 40.000 0.00 0.00 0.00 4.18
96 97 5.007626 CACTGGATGTTTGAAGAAAAGTCGA 59.992 40.000 0.00 0.00 0.00 4.20
97 98 5.237344 ACTGGATGTTTGAAGAAAAGTCGAG 59.763 40.000 0.00 0.00 31.36 4.04
98 99 5.364778 TGGATGTTTGAAGAAAAGTCGAGA 58.635 37.500 0.00 0.00 0.00 4.04
99 100 5.997746 TGGATGTTTGAAGAAAAGTCGAGAT 59.002 36.000 0.00 0.00 0.00 2.75
100 101 6.073058 TGGATGTTTGAAGAAAAGTCGAGATG 60.073 38.462 0.00 0.00 0.00 2.90
101 102 5.095691 TGTTTGAAGAAAAGTCGAGATGC 57.904 39.130 0.00 0.00 0.00 3.91
102 103 4.574421 TGTTTGAAGAAAAGTCGAGATGCA 59.426 37.500 0.00 0.00 0.00 3.96
103 104 5.065859 TGTTTGAAGAAAAGTCGAGATGCAA 59.934 36.000 0.00 0.00 0.00 4.08
104 105 4.997905 TGAAGAAAAGTCGAGATGCAAG 57.002 40.909 0.00 0.00 0.00 4.01
105 106 4.631131 TGAAGAAAAGTCGAGATGCAAGA 58.369 39.130 0.00 0.00 0.00 3.02
106 107 4.687948 TGAAGAAAAGTCGAGATGCAAGAG 59.312 41.667 0.00 0.00 0.00 2.85
107 108 4.527509 AGAAAAGTCGAGATGCAAGAGA 57.472 40.909 0.00 0.00 0.00 3.10
108 109 4.241681 AGAAAAGTCGAGATGCAAGAGAC 58.758 43.478 0.00 0.00 0.00 3.36
109 110 2.270275 AAGTCGAGATGCAAGAGACG 57.730 50.000 0.00 0.00 36.97 4.18
110 111 1.454201 AGTCGAGATGCAAGAGACGA 58.546 50.000 0.00 0.00 36.97 4.20
111 112 1.400142 AGTCGAGATGCAAGAGACGAG 59.600 52.381 0.00 0.00 36.97 4.18
112 113 1.131504 GTCGAGATGCAAGAGACGAGT 59.868 52.381 0.00 0.00 0.00 4.18
113 114 1.398739 TCGAGATGCAAGAGACGAGTC 59.601 52.381 0.00 0.00 0.00 3.36
114 115 1.400142 CGAGATGCAAGAGACGAGTCT 59.600 52.381 5.31 5.31 43.78 3.24
115 116 2.790812 CGAGATGCAAGAGACGAGTCTG 60.791 54.545 10.82 0.00 40.61 3.51
116 117 1.476085 AGATGCAAGAGACGAGTCTGG 59.524 52.381 10.82 1.62 40.61 3.86
117 118 1.474478 GATGCAAGAGACGAGTCTGGA 59.526 52.381 10.82 0.00 40.61 3.86
118 119 0.884514 TGCAAGAGACGAGTCTGGAG 59.115 55.000 10.82 1.32 40.61 3.86
119 120 0.885196 GCAAGAGACGAGTCTGGAGT 59.115 55.000 10.82 0.00 40.61 3.85
120 121 1.135517 GCAAGAGACGAGTCTGGAGTC 60.136 57.143 10.82 0.00 40.61 3.36
121 122 2.155279 CAAGAGACGAGTCTGGAGTCA 58.845 52.381 10.82 0.00 40.61 3.41
122 123 2.554462 CAAGAGACGAGTCTGGAGTCAA 59.446 50.000 10.82 0.00 40.61 3.18
123 124 3.080300 AGAGACGAGTCTGGAGTCAAT 57.920 47.619 10.82 0.00 40.61 2.57
124 125 2.752354 AGAGACGAGTCTGGAGTCAATG 59.248 50.000 10.82 0.00 40.61 2.82
125 126 2.750166 GAGACGAGTCTGGAGTCAATGA 59.250 50.000 10.82 0.00 40.61 2.57
126 127 2.490115 AGACGAGTCTGGAGTCAATGAC 59.510 50.000 5.02 5.02 38.75 3.06
127 128 2.490115 GACGAGTCTGGAGTCAATGACT 59.510 50.000 16.70 16.70 46.42 3.41
128 129 3.687125 ACGAGTCTGGAGTCAATGACTA 58.313 45.455 16.71 0.40 43.53 2.59
129 130 3.440872 ACGAGTCTGGAGTCAATGACTAC 59.559 47.826 18.36 18.36 43.53 2.73
130 131 3.181495 CGAGTCTGGAGTCAATGACTACC 60.181 52.174 21.81 19.92 42.48 3.18
131 132 3.764434 GAGTCTGGAGTCAATGACTACCA 59.236 47.826 21.81 22.72 42.48 3.25
132 133 4.160329 AGTCTGGAGTCAATGACTACCAA 58.840 43.478 21.81 7.94 42.48 3.67
133 134 4.221703 AGTCTGGAGTCAATGACTACCAAG 59.778 45.833 21.81 13.81 42.48 3.61
134 135 3.515502 TCTGGAGTCAATGACTACCAAGG 59.484 47.826 21.81 15.38 42.48 3.61
135 136 3.515502 CTGGAGTCAATGACTACCAAGGA 59.484 47.826 21.81 2.95 42.48 3.36
136 137 3.260884 TGGAGTCAATGACTACCAAGGAC 59.739 47.826 21.81 4.70 42.48 3.85
137 138 3.515901 GGAGTCAATGACTACCAAGGACT 59.484 47.826 16.71 0.00 43.53 3.85
138 139 4.020128 GGAGTCAATGACTACCAAGGACTT 60.020 45.833 16.71 0.00 43.53 3.01
139 140 5.513267 GGAGTCAATGACTACCAAGGACTTT 60.513 44.000 16.71 0.00 43.53 2.66
140 141 5.941788 AGTCAATGACTACCAAGGACTTTT 58.058 37.500 15.09 0.00 41.51 2.27
141 142 5.765182 AGTCAATGACTACCAAGGACTTTTG 59.235 40.000 15.09 0.00 41.51 2.44
142 143 5.763204 GTCAATGACTACCAAGGACTTTTGA 59.237 40.000 6.07 0.00 32.48 2.69
143 144 6.431234 GTCAATGACTACCAAGGACTTTTGAT 59.569 38.462 6.07 0.00 32.48 2.57
144 145 6.430925 TCAATGACTACCAAGGACTTTTGATG 59.569 38.462 0.00 0.00 0.00 3.07
145 146 5.304686 TGACTACCAAGGACTTTTGATGT 57.695 39.130 0.00 0.00 0.00 3.06
146 147 6.428083 TGACTACCAAGGACTTTTGATGTA 57.572 37.500 0.00 0.00 0.00 2.29
147 148 6.833041 TGACTACCAAGGACTTTTGATGTAA 58.167 36.000 0.00 0.00 0.00 2.41
148 149 6.708949 TGACTACCAAGGACTTTTGATGTAAC 59.291 38.462 0.00 0.00 0.00 2.50
149 150 6.838382 ACTACCAAGGACTTTTGATGTAACT 58.162 36.000 0.00 0.00 0.00 2.24
150 151 7.287810 ACTACCAAGGACTTTTGATGTAACTT 58.712 34.615 0.00 0.00 0.00 2.66
151 152 7.778382 ACTACCAAGGACTTTTGATGTAACTTT 59.222 33.333 0.00 0.00 0.00 2.66
152 153 9.280174 CTACCAAGGACTTTTGATGTAACTTTA 57.720 33.333 0.00 0.00 0.00 1.85
153 154 8.706322 ACCAAGGACTTTTGATGTAACTTTAT 57.294 30.769 0.00 0.00 0.00 1.40
154 155 9.143155 ACCAAGGACTTTTGATGTAACTTTATT 57.857 29.630 0.00 0.00 0.00 1.40
155 156 9.981114 CCAAGGACTTTTGATGTAACTTTATTT 57.019 29.630 0.00 0.00 0.00 1.40
230 231 9.509855 TGTGATTTGTGTAAACTATCAACAAAC 57.490 29.630 1.74 0.00 0.00 2.93
231 232 9.509855 GTGATTTGTGTAAACTATCAACAAACA 57.490 29.630 1.74 1.22 0.00 2.83
234 235 8.864069 TTTGTGTAAACTATCAACAAACATGG 57.136 30.769 0.00 0.00 0.00 3.66
235 236 7.575414 TGTGTAAACTATCAACAAACATGGT 57.425 32.000 0.00 0.00 0.00 3.55
236 237 8.001881 TGTGTAAACTATCAACAAACATGGTT 57.998 30.769 0.00 0.00 0.00 3.67
237 238 9.121658 TGTGTAAACTATCAACAAACATGGTTA 57.878 29.630 0.00 0.00 0.00 2.85
238 239 9.953697 GTGTAAACTATCAACAAACATGGTTAA 57.046 29.630 0.00 0.00 0.00 2.01
243 244 9.834628 AACTATCAACAAACATGGTTAAATACG 57.165 29.630 0.00 0.00 0.00 3.06
244 245 9.221933 ACTATCAACAAACATGGTTAAATACGA 57.778 29.630 0.00 0.00 0.00 3.43
245 246 9.485591 CTATCAACAAACATGGTTAAATACGAC 57.514 33.333 0.00 0.00 0.00 4.34
246 247 6.364261 TCAACAAACATGGTTAAATACGACG 58.636 36.000 0.00 0.00 0.00 5.12
247 248 4.714851 ACAAACATGGTTAAATACGACGC 58.285 39.130 0.00 0.00 0.00 5.19
248 249 4.453136 ACAAACATGGTTAAATACGACGCT 59.547 37.500 0.00 0.00 0.00 5.07
249 250 4.852609 AACATGGTTAAATACGACGCTC 57.147 40.909 0.00 0.00 0.00 5.03
250 251 2.855963 ACATGGTTAAATACGACGCTCG 59.144 45.455 0.00 5.97 46.93 5.03
259 260 2.101770 CGACGCTCGTACCCCTTC 59.898 66.667 0.00 0.00 34.72 3.46
260 261 2.101770 GACGCTCGTACCCCTTCG 59.898 66.667 0.00 0.00 0.00 3.79
261 262 4.125695 ACGCTCGTACCCCTTCGC 62.126 66.667 0.00 0.00 0.00 4.70
262 263 3.823330 CGCTCGTACCCCTTCGCT 61.823 66.667 0.00 0.00 0.00 4.93
263 264 2.104530 GCTCGTACCCCTTCGCTC 59.895 66.667 0.00 0.00 0.00 5.03
264 265 2.806237 CTCGTACCCCTTCGCTCC 59.194 66.667 0.00 0.00 0.00 4.70
265 266 1.753463 CTCGTACCCCTTCGCTCCT 60.753 63.158 0.00 0.00 0.00 3.69
266 267 0.465097 CTCGTACCCCTTCGCTCCTA 60.465 60.000 0.00 0.00 0.00 2.94
267 268 0.465097 TCGTACCCCTTCGCTCCTAG 60.465 60.000 0.00 0.00 0.00 3.02
268 269 1.453762 CGTACCCCTTCGCTCCTAGG 61.454 65.000 0.82 0.82 0.00 3.02
269 270 1.457079 TACCCCTTCGCTCCTAGGC 60.457 63.158 2.96 0.00 0.00 3.93
270 271 2.232892 TACCCCTTCGCTCCTAGGCA 62.233 60.000 2.96 0.00 0.00 4.75
271 272 2.801631 CCCCTTCGCTCCTAGGCAG 61.802 68.421 2.96 3.85 0.00 4.85
272 273 2.060980 CCCTTCGCTCCTAGGCAGT 61.061 63.158 2.96 0.00 0.00 4.40
273 274 1.142748 CCTTCGCTCCTAGGCAGTG 59.857 63.158 2.96 9.45 0.00 3.66
274 275 1.142748 CTTCGCTCCTAGGCAGTGG 59.857 63.158 2.96 0.34 0.00 4.00
275 276 1.304962 TTCGCTCCTAGGCAGTGGA 60.305 57.895 2.96 1.21 0.00 4.02
276 277 0.902984 TTCGCTCCTAGGCAGTGGAA 60.903 55.000 2.96 7.99 31.23 3.53
277 278 1.153549 CGCTCCTAGGCAGTGGAAC 60.154 63.158 2.96 0.00 31.23 3.62
278 279 1.222113 GCTCCTAGGCAGTGGAACC 59.778 63.158 2.96 0.00 37.80 3.62
279 280 1.908483 CTCCTAGGCAGTGGAACCC 59.092 63.158 2.96 0.00 37.80 4.11
280 281 0.618968 CTCCTAGGCAGTGGAACCCT 60.619 60.000 2.96 0.00 37.80 4.34
281 282 0.909610 TCCTAGGCAGTGGAACCCTG 60.910 60.000 2.96 0.00 37.80 4.45
282 283 1.201429 CCTAGGCAGTGGAACCCTGT 61.201 60.000 0.00 0.00 37.80 4.00
283 284 0.250513 CTAGGCAGTGGAACCCTGTC 59.749 60.000 0.00 6.04 37.80 3.51
284 285 0.472925 TAGGCAGTGGAACCCTGTCA 60.473 55.000 13.32 1.82 37.01 3.58
285 286 1.600916 GGCAGTGGAACCCTGTCAC 60.601 63.158 8.33 0.00 37.80 3.67
286 287 1.451936 GCAGTGGAACCCTGTCACT 59.548 57.895 0.00 0.00 41.81 3.41
287 288 0.685097 GCAGTGGAACCCTGTCACTA 59.315 55.000 0.00 0.00 39.43 2.74
288 289 1.338200 GCAGTGGAACCCTGTCACTAG 60.338 57.143 0.00 0.00 39.43 2.57
289 290 1.971357 CAGTGGAACCCTGTCACTAGT 59.029 52.381 0.00 0.00 39.43 2.57
290 291 1.971357 AGTGGAACCCTGTCACTAGTG 59.029 52.381 17.17 17.17 39.63 2.74
291 292 1.692519 GTGGAACCCTGTCACTAGTGT 59.307 52.381 21.99 0.91 0.00 3.55
292 293 2.104281 GTGGAACCCTGTCACTAGTGTT 59.896 50.000 21.99 8.24 0.00 3.32
293 294 2.775384 TGGAACCCTGTCACTAGTGTTT 59.225 45.455 21.99 7.38 0.00 2.83
294 295 3.201266 TGGAACCCTGTCACTAGTGTTTT 59.799 43.478 21.99 7.70 0.00 2.43
295 296 3.813724 GGAACCCTGTCACTAGTGTTTTC 59.186 47.826 21.99 14.59 0.00 2.29
296 297 3.487120 ACCCTGTCACTAGTGTTTTCC 57.513 47.619 21.99 7.37 0.00 3.13
297 298 2.224209 ACCCTGTCACTAGTGTTTTCCG 60.224 50.000 21.99 9.35 0.00 4.30
298 299 2.224209 CCCTGTCACTAGTGTTTTCCGT 60.224 50.000 21.99 0.00 0.00 4.69
299 300 2.800544 CCTGTCACTAGTGTTTTCCGTG 59.199 50.000 21.99 5.79 0.00 4.94
300 301 2.206750 TGTCACTAGTGTTTTCCGTGC 58.793 47.619 21.99 4.15 0.00 5.34
301 302 1.529865 GTCACTAGTGTTTTCCGTGCC 59.470 52.381 21.99 0.00 0.00 5.01
302 303 1.414919 TCACTAGTGTTTTCCGTGCCT 59.585 47.619 21.99 0.00 0.00 4.75
303 304 1.798813 CACTAGTGTTTTCCGTGCCTC 59.201 52.381 15.06 0.00 0.00 4.70
304 305 1.270678 ACTAGTGTTTTCCGTGCCTCC 60.271 52.381 0.00 0.00 0.00 4.30
305 306 0.035739 TAGTGTTTTCCGTGCCTCCC 59.964 55.000 0.00 0.00 0.00 4.30
306 307 2.281208 TGTTTTCCGTGCCTCCCG 60.281 61.111 0.00 0.00 0.00 5.14
307 308 3.733960 GTTTTCCGTGCCTCCCGC 61.734 66.667 0.00 0.00 38.31 6.13
320 321 4.641645 CCCGCCAGCACACCTGAA 62.642 66.667 0.00 0.00 44.64 3.02
321 322 3.052082 CCGCCAGCACACCTGAAG 61.052 66.667 0.00 0.00 44.64 3.02
322 323 3.052082 CGCCAGCACACCTGAAGG 61.052 66.667 0.00 0.00 44.64 3.46
323 324 3.368571 GCCAGCACACCTGAAGGC 61.369 66.667 0.00 0.00 44.64 4.35
324 325 2.674380 CCAGCACACCTGAAGGCC 60.674 66.667 0.00 0.00 44.64 5.19
325 326 2.113774 CAGCACACCTGAAGGCCA 59.886 61.111 5.01 0.00 44.64 5.36
326 327 1.303888 CAGCACACCTGAAGGCCAT 60.304 57.895 5.01 0.00 44.64 4.40
327 328 1.303888 AGCACACCTGAAGGCCATG 60.304 57.895 5.01 0.00 39.32 3.66
328 329 2.345760 GCACACCTGAAGGCCATGG 61.346 63.158 7.63 7.63 39.32 3.66
329 330 1.379916 CACACCTGAAGGCCATGGA 59.620 57.895 18.40 0.00 39.32 3.41
330 331 0.033796 CACACCTGAAGGCCATGGAT 60.034 55.000 18.40 0.00 39.32 3.41
331 332 0.257039 ACACCTGAAGGCCATGGATC 59.743 55.000 18.40 10.76 39.32 3.36
332 333 0.466922 CACCTGAAGGCCATGGATCC 60.467 60.000 18.40 8.30 39.32 3.36
333 334 0.920763 ACCTGAAGGCCATGGATCCA 60.921 55.000 18.88 18.88 39.32 3.41
334 335 0.481567 CCTGAAGGCCATGGATCCAT 59.518 55.000 22.15 22.15 37.08 3.41
335 336 4.422266 ACCTGAAGGCCATGGATCCATG 62.422 54.545 37.88 37.88 44.42 3.66
348 349 3.738308 TCCATGGTGGATCCTGACT 57.262 52.632 14.23 0.00 42.67 3.41
349 350 1.500474 TCCATGGTGGATCCTGACTC 58.500 55.000 14.23 0.00 42.67 3.36
350 351 1.008815 TCCATGGTGGATCCTGACTCT 59.991 52.381 14.23 0.00 42.67 3.24
351 352 1.842562 CCATGGTGGATCCTGACTCTT 59.157 52.381 14.23 0.00 40.96 2.85
352 353 2.421107 CCATGGTGGATCCTGACTCTTG 60.421 54.545 14.23 6.49 40.96 3.02
353 354 0.615331 TGGTGGATCCTGACTCTTGC 59.385 55.000 14.23 0.00 37.07 4.01
354 355 0.107459 GGTGGATCCTGACTCTTGCC 60.107 60.000 14.23 0.00 0.00 4.52
355 356 0.615331 GTGGATCCTGACTCTTGCCA 59.385 55.000 14.23 0.00 0.00 4.92
356 357 1.003580 GTGGATCCTGACTCTTGCCAA 59.996 52.381 14.23 0.00 0.00 4.52
357 358 1.003580 TGGATCCTGACTCTTGCCAAC 59.996 52.381 14.23 0.00 0.00 3.77
358 359 1.363744 GATCCTGACTCTTGCCAACG 58.636 55.000 0.00 0.00 0.00 4.10
359 360 0.036010 ATCCTGACTCTTGCCAACGG 60.036 55.000 0.00 0.00 0.00 4.44
360 361 1.672356 CCTGACTCTTGCCAACGGG 60.672 63.158 0.00 0.00 37.18 5.28
361 362 1.371183 CTGACTCTTGCCAACGGGA 59.629 57.895 0.00 0.00 35.59 5.14
362 363 0.671781 CTGACTCTTGCCAACGGGAG 60.672 60.000 0.00 0.00 35.59 4.30
363 364 1.376037 GACTCTTGCCAACGGGAGG 60.376 63.158 0.00 0.00 35.59 4.30
370 371 4.174305 CCAACGGGAGGCTTTGTT 57.826 55.556 0.00 0.00 35.59 2.83
371 372 2.425562 CCAACGGGAGGCTTTGTTT 58.574 52.632 0.00 0.00 35.59 2.83
372 373 0.750249 CCAACGGGAGGCTTTGTTTT 59.250 50.000 0.00 0.00 35.59 2.43
373 374 1.138069 CCAACGGGAGGCTTTGTTTTT 59.862 47.619 0.00 0.00 35.59 1.94
374 375 2.200899 CAACGGGAGGCTTTGTTTTTG 58.799 47.619 0.00 0.00 0.00 2.44
375 376 0.750249 ACGGGAGGCTTTGTTTTTGG 59.250 50.000 0.00 0.00 0.00 3.28
376 377 1.036707 CGGGAGGCTTTGTTTTTGGA 58.963 50.000 0.00 0.00 0.00 3.53
377 378 1.410882 CGGGAGGCTTTGTTTTTGGAA 59.589 47.619 0.00 0.00 0.00 3.53
417 418 2.900546 AGGGTTTGTGTCCTACTCAGAG 59.099 50.000 0.00 0.00 0.00 3.35
419 420 3.515901 GGGTTTGTGTCCTACTCAGAGAT 59.484 47.826 3.79 0.00 0.00 2.75
421 422 4.021016 GGTTTGTGTCCTACTCAGAGATGT 60.021 45.833 3.79 0.00 0.00 3.06
422 423 5.511545 GGTTTGTGTCCTACTCAGAGATGTT 60.512 44.000 3.79 0.00 0.00 2.71
425 426 4.950475 TGTGTCCTACTCAGAGATGTTAGG 59.050 45.833 3.79 4.99 0.00 2.69
426 427 4.951094 GTGTCCTACTCAGAGATGTTAGGT 59.049 45.833 3.79 0.00 0.00 3.08
427 428 6.120905 GTGTCCTACTCAGAGATGTTAGGTA 58.879 44.000 3.79 0.00 0.00 3.08
429 430 5.239963 GTCCTACTCAGAGATGTTAGGTAGC 59.760 48.000 3.79 0.00 0.00 3.58
431 432 2.359531 ACTCAGAGATGTTAGGTAGCGC 59.640 50.000 3.79 0.00 0.00 5.92
448 450 1.709147 CGCCGGCTCTTTGAAGATGG 61.709 60.000 26.68 0.00 33.93 3.51
454 456 4.823989 CCGGCTCTTTGAAGATGGAATAAT 59.176 41.667 0.00 0.00 33.93 1.28
456 458 6.073003 CCGGCTCTTTGAAGATGGAATAATAC 60.073 42.308 0.00 0.00 33.93 1.89
457 459 6.708054 CGGCTCTTTGAAGATGGAATAATACT 59.292 38.462 0.00 0.00 33.93 2.12
463 465 7.690454 TTGAAGATGGAATAATACTCTCCCA 57.310 36.000 0.00 0.00 0.00 4.37
466 468 4.534103 AGATGGAATAATACTCTCCCAGCC 59.466 45.833 0.00 0.00 31.08 4.85
467 469 2.979678 TGGAATAATACTCTCCCAGCCC 59.020 50.000 0.00 0.00 0.00 5.19
483 486 4.778143 CCAGCCCTGGTACACCGC 62.778 72.222 6.15 0.00 45.53 5.68
487 490 3.706373 CCCTGGTACACCGCTGCT 61.706 66.667 0.00 0.00 39.43 4.24
489 492 1.594833 CCTGGTACACCGCTGCTTA 59.405 57.895 0.00 0.00 39.43 3.09
493 496 1.202486 TGGTACACCGCTGCTTATAGC 60.202 52.381 0.00 0.00 39.51 2.97
496 499 6.818844 TGGTACACCGCTGCTTATAGCATC 62.819 50.000 1.32 0.00 44.75 3.91
512 515 1.977009 ATCGTCAGAGGGCGTGTGA 60.977 57.895 2.61 2.61 0.00 3.58
518 521 1.071471 AGAGGGCGTGTGAAGGTTG 59.929 57.895 0.00 0.00 0.00 3.77
519 522 1.966451 GAGGGCGTGTGAAGGTTGG 60.966 63.158 0.00 0.00 0.00 3.77
524 527 0.249911 GCGTGTGAAGGTTGGTCTCT 60.250 55.000 0.00 0.00 0.00 3.10
527 530 1.141053 GTGTGAAGGTTGGTCTCTGGT 59.859 52.381 0.00 0.00 0.00 4.00
535 538 1.902508 GTTGGTCTCTGGTGGATCTCA 59.097 52.381 0.00 0.00 0.00 3.27
541 544 2.121948 CTCTGGTGGATCTCATGGGAA 58.878 52.381 0.00 0.00 0.00 3.97
544 547 2.440627 CTGGTGGATCTCATGGGAATCA 59.559 50.000 0.00 0.00 0.00 2.57
551 554 0.870393 CTCATGGGAATCAATCGGCG 59.130 55.000 0.00 0.00 0.00 6.46
552 555 0.180171 TCATGGGAATCAATCGGCGT 59.820 50.000 6.85 0.00 0.00 5.68
561 564 3.915437 ATCAATCGGCGTTTTGTCTTT 57.085 38.095 19.18 6.29 0.00 2.52
566 569 0.099791 CGGCGTTTTGTCTTTGGTGT 59.900 50.000 0.00 0.00 0.00 4.16
569 572 3.549221 CGGCGTTTTGTCTTTGGTGTATT 60.549 43.478 0.00 0.00 0.00 1.89
572 575 5.219633 GCGTTTTGTCTTTGGTGTATTCAT 58.780 37.500 0.00 0.00 0.00 2.57
576 579 6.951062 TTTGTCTTTGGTGTATTCATGTGA 57.049 33.333 0.00 0.00 0.00 3.58
579 582 7.523293 TGTCTTTGGTGTATTCATGTGAATT 57.477 32.000 12.95 0.00 41.64 2.17
580 583 7.950512 TGTCTTTGGTGTATTCATGTGAATTT 58.049 30.769 12.95 0.00 41.64 1.82
582 585 7.867403 GTCTTTGGTGTATTCATGTGAATTTGT 59.133 33.333 12.95 0.00 41.64 2.83
583 586 8.081633 TCTTTGGTGTATTCATGTGAATTTGTC 58.918 33.333 12.95 3.65 41.64 3.18
584 587 7.523293 TTGGTGTATTCATGTGAATTTGTCT 57.477 32.000 12.95 0.00 41.64 3.41
586 589 7.592938 TGGTGTATTCATGTGAATTTGTCTTC 58.407 34.615 12.95 0.40 41.64 2.87
587 590 6.742718 GGTGTATTCATGTGAATTTGTCTTCG 59.257 38.462 12.95 0.00 41.64 3.79
588 591 7.298122 GTGTATTCATGTGAATTTGTCTTCGT 58.702 34.615 12.95 0.00 41.64 3.85
590 593 8.349245 TGTATTCATGTGAATTTGTCTTCGTTT 58.651 29.630 12.95 0.00 41.64 3.60
591 594 7.627585 ATTCATGTGAATTTGTCTTCGTTTG 57.372 32.000 2.48 0.00 41.64 2.93
592 595 6.130298 TCATGTGAATTTGTCTTCGTTTGT 57.870 33.333 0.00 0.00 0.00 2.83
593 596 6.198687 TCATGTGAATTTGTCTTCGTTTGTC 58.801 36.000 0.00 0.00 0.00 3.18
596 602 4.437820 GTGAATTTGTCTTCGTTTGTCTGC 59.562 41.667 0.00 0.00 0.00 4.26
598 604 4.900635 ATTTGTCTTCGTTTGTCTGCTT 57.099 36.364 0.00 0.00 0.00 3.91
603 609 2.607635 TCTTCGTTTGTCTGCTTGTGTC 59.392 45.455 0.00 0.00 0.00 3.67
610 616 4.400529 TTGTCTGCTTGTGTCTCTACAA 57.599 40.909 0.00 0.00 37.36 2.41
611 617 4.400529 TGTCTGCTTGTGTCTCTACAAA 57.599 40.909 0.00 0.00 39.81 2.83
612 618 4.960938 TGTCTGCTTGTGTCTCTACAAAT 58.039 39.130 0.00 0.00 39.81 2.32
613 619 4.991056 TGTCTGCTTGTGTCTCTACAAATC 59.009 41.667 0.00 0.00 39.81 2.17
617 623 4.184629 GCTTGTGTCTCTACAAATCGGAT 58.815 43.478 0.00 0.00 39.81 4.18
619 625 4.386867 TGTGTCTCTACAAATCGGATCC 57.613 45.455 0.00 0.00 37.36 3.36
623 629 4.709886 TGTCTCTACAAATCGGATCCTTCA 59.290 41.667 10.75 0.00 30.91 3.02
638 644 2.952978 TCCTTCAGATCTACGCTTCTCC 59.047 50.000 0.00 0.00 0.00 3.71
641 647 2.214347 TCAGATCTACGCTTCTCCTCG 58.786 52.381 0.00 0.00 0.00 4.63
645 651 0.108472 TCTACGCTTCTCCTCGTCGA 60.108 55.000 0.00 0.00 39.79 4.20
646 652 0.938713 CTACGCTTCTCCTCGTCGAT 59.061 55.000 0.00 0.00 39.79 3.59
651 657 2.669808 CTTCTCCTCGTCGATGGCGG 62.670 65.000 4.48 6.19 38.28 6.13
657 663 0.457166 CTCGTCGATGGCGGTTGTTA 60.457 55.000 4.48 0.00 38.28 2.41
660 666 1.395608 CGTCGATGGCGGTTGTTATTT 59.604 47.619 0.00 0.00 38.28 1.40
663 669 3.075148 TCGATGGCGGTTGTTATTTTGA 58.925 40.909 0.00 0.00 38.28 2.69
666 672 2.953020 TGGCGGTTGTTATTTTGATGC 58.047 42.857 0.00 0.00 0.00 3.91
670 676 3.729462 GCGGTTGTTATTTTGATGCGCTA 60.729 43.478 9.73 0.00 0.00 4.26
673 679 5.399013 GGTTGTTATTTTGATGCGCTAGTT 58.601 37.500 9.73 0.00 0.00 2.24
674 680 5.861787 GGTTGTTATTTTGATGCGCTAGTTT 59.138 36.000 9.73 0.00 0.00 2.66
675 681 7.024768 GGTTGTTATTTTGATGCGCTAGTTTA 58.975 34.615 9.73 0.00 0.00 2.01
676 682 7.700656 GGTTGTTATTTTGATGCGCTAGTTTAT 59.299 33.333 9.73 0.00 0.00 1.40
677 683 9.710979 GTTGTTATTTTGATGCGCTAGTTTATA 57.289 29.630 9.73 0.00 0.00 0.98
682 688 6.721571 TTTGATGCGCTAGTTTATATAGCC 57.278 37.500 9.73 0.00 42.18 3.93
685 691 7.165460 TGATGCGCTAGTTTATATAGCCTTA 57.835 36.000 9.73 0.00 42.18 2.69
686 692 7.033791 TGATGCGCTAGTTTATATAGCCTTAC 58.966 38.462 9.73 0.00 42.18 2.34
692 699 6.805760 GCTAGTTTATATAGCCTTACCACGAC 59.194 42.308 0.00 0.00 39.82 4.34
701 708 1.538512 CCTTACCACGACGACTTCTCA 59.461 52.381 0.00 0.00 0.00 3.27
702 709 2.163815 CCTTACCACGACGACTTCTCAT 59.836 50.000 0.00 0.00 0.00 2.90
728 735 7.338449 TCTGTCTACTACAATAAAATTTGCCCC 59.662 37.037 0.00 0.00 37.74 5.80
729 736 6.094325 TGTCTACTACAATAAAATTTGCCCCG 59.906 38.462 0.00 0.00 34.29 5.73
730 737 6.094464 GTCTACTACAATAAAATTTGCCCCGT 59.906 38.462 0.00 0.00 0.00 5.28
734 741 3.325135 ACAATAAAATTTGCCCCGTTCCA 59.675 39.130 0.00 0.00 0.00 3.53
737 744 5.941555 ATAAAATTTGCCCCGTTCCAATA 57.058 34.783 0.00 0.00 0.00 1.90
741 748 0.323908 TTGCCCCGTTCCAATAAGGG 60.324 55.000 0.00 0.00 43.41 3.95
747 754 1.408266 CCGTTCCAATAAGGGAGGGTG 60.408 57.143 0.00 0.00 44.65 4.61
748 755 1.408266 CGTTCCAATAAGGGAGGGTGG 60.408 57.143 0.00 0.00 38.42 4.61
755 762 2.390777 TAAGGGAGGGTGGTGACGGT 62.391 60.000 0.00 0.00 0.00 4.83
757 764 4.016706 GGAGGGTGGTGACGGTGG 62.017 72.222 0.00 0.00 0.00 4.61
777 785 2.492090 CCCCTTCAGTCGCTCGAG 59.508 66.667 8.45 8.45 0.00 4.04
783 791 0.879090 TTCAGTCGCTCGAGTGCTTA 59.121 50.000 21.17 10.10 43.28 3.09
796 804 3.662195 CGAGTGCTTATAGTCGTCGCTAG 60.662 52.174 0.00 0.00 38.39 3.42
797 805 3.464907 AGTGCTTATAGTCGTCGCTAGA 58.535 45.455 0.00 0.00 0.00 2.43
806 814 2.158928 AGTCGTCGCTAGATGGTCTACT 60.159 50.000 0.00 0.00 34.23 2.57
809 817 2.809119 CGTCGCTAGATGGTCTACTGAT 59.191 50.000 0.00 0.00 0.00 2.90
810 818 3.251245 CGTCGCTAGATGGTCTACTGATT 59.749 47.826 0.00 0.00 0.00 2.57
812 820 5.593010 GTCGCTAGATGGTCTACTGATTTT 58.407 41.667 0.00 0.00 0.00 1.82
816 824 6.145209 CGCTAGATGGTCTACTGATTTTGATG 59.855 42.308 0.00 0.00 0.00 3.07
857 865 8.138365 TGTTGTTCTTTGTACTATCTTGACAC 57.862 34.615 0.00 0.00 0.00 3.67
858 866 7.225931 TGTTGTTCTTTGTACTATCTTGACACC 59.774 37.037 0.00 0.00 0.00 4.16
865 873 6.208988 TGTACTATCTTGACACCTGATGAC 57.791 41.667 0.00 0.00 0.00 3.06
868 876 7.614192 TGTACTATCTTGACACCTGATGACTAA 59.386 37.037 0.00 0.00 0.00 2.24
871 879 9.201989 ACTATCTTGACACCTGATGACTAAATA 57.798 33.333 0.00 0.00 0.00 1.40
873 881 7.718334 TCTTGACACCTGATGACTAAATAGA 57.282 36.000 0.00 0.00 0.00 1.98
875 883 8.253810 TCTTGACACCTGATGACTAAATAGAAG 58.746 37.037 0.00 0.00 0.00 2.85
876 884 7.482169 TGACACCTGATGACTAAATAGAAGT 57.518 36.000 0.00 0.00 0.00 3.01
878 886 8.035394 TGACACCTGATGACTAAATAGAAGTTC 58.965 37.037 0.00 0.00 0.00 3.01
930 938 5.999205 AAATCAATTTGGATGTGTAGCCA 57.001 34.783 0.00 0.00 41.49 4.75
963 974 4.870363 TGCAAAATTGTCTCTTTACCAGC 58.130 39.130 0.00 0.00 0.00 4.85
1020 1035 0.465705 TGCTAAGATCAGCCTTCCCG 59.534 55.000 2.82 0.00 41.04 5.14
1668 1683 2.180946 ACTGGAGCATGGACCTCATA 57.819 50.000 0.00 0.00 34.12 2.15
1807 1823 4.661222 TGGCCAAATGTGAGTTCATTCTA 58.339 39.130 0.61 0.00 37.09 2.10
1814 1830 9.293404 CCAAATGTGAGTTCATTCTATCCATAT 57.707 33.333 0.00 0.00 37.09 1.78
1999 2020 5.737290 CACTGGTTTGTGTTTTAGAAGTTCG 59.263 40.000 0.00 0.00 33.61 3.95
2035 2056 6.335781 TGGAAAGGGGCTACTTGTATTAAT 57.664 37.500 0.00 0.00 0.00 1.40
2135 2162 2.290641 CCACACAACACCTTTCTACAGC 59.709 50.000 0.00 0.00 0.00 4.40
2185 2212 8.635765 TGTTATCCTGCTTTTAGATTTTGAGT 57.364 30.769 0.00 0.00 0.00 3.41
2214 2241 1.202879 ACTCGGGAATTCAGGCAACAA 60.203 47.619 7.93 0.00 41.41 2.83
2215 2242 2.094675 CTCGGGAATTCAGGCAACAAT 58.905 47.619 7.93 0.00 41.41 2.71
2216 2243 2.493278 CTCGGGAATTCAGGCAACAATT 59.507 45.455 7.93 0.00 41.41 2.32
2269 2296 2.092968 GGACCAGCACAACATATGAGGA 60.093 50.000 10.38 0.00 0.00 3.71
2501 2529 0.863144 CGGTAAAACTGGTGTCCACG 59.137 55.000 0.00 0.00 0.00 4.94
2577 2605 0.905357 TCTCCTTGCTAGCTTGTCCC 59.095 55.000 17.23 0.00 0.00 4.46
2590 2618 2.237392 GCTTGTCCCTGGATTACACTCT 59.763 50.000 0.00 0.00 0.00 3.24
2592 2620 3.981071 TGTCCCTGGATTACACTCTTG 57.019 47.619 0.00 0.00 0.00 3.02
2593 2621 2.027192 TGTCCCTGGATTACACTCTTGC 60.027 50.000 0.00 0.00 0.00 4.01
2594 2622 1.207089 TCCCTGGATTACACTCTTGCG 59.793 52.381 0.00 0.00 0.00 4.85
2596 2624 1.066143 CCTGGATTACACTCTTGCGGT 60.066 52.381 0.00 0.00 0.00 5.68
2623 2651 7.581213 TGCCCTTTTCATCGTATTCATTTAT 57.419 32.000 0.00 0.00 0.00 1.40
2664 2692 5.700832 TGCAAAGTGTTCCTATAGTTCAGTG 59.299 40.000 0.00 0.00 0.00 3.66
2688 2716 2.515854 ACTGAACCGAAGCTCTGACTA 58.484 47.619 0.00 0.00 0.00 2.59
2702 2730 4.573900 CTCTGACTATTGCCTCACTGTTT 58.426 43.478 0.00 0.00 0.00 2.83
2714 2742 4.570772 GCCTCACTGTTTGCGAAGATTATA 59.429 41.667 0.00 0.00 0.00 0.98
2718 2746 7.234187 TCACTGTTTGCGAAGATTATATCAC 57.766 36.000 0.00 0.00 0.00 3.06
2834 2863 7.246674 ACTCAACCAATTGCATTATACTACG 57.753 36.000 0.00 0.00 35.63 3.51
2975 3004 5.428496 AAATATGTGTCAGATTGATGCCG 57.572 39.130 0.00 0.00 0.00 5.69
2983 3012 3.679025 GTCAGATTGATGCCGATCTCATC 59.321 47.826 14.36 14.36 40.68 2.92
3051 3080 2.289882 CCCAAATGAGACAGACTCTGCA 60.290 50.000 5.92 0.00 45.13 4.41
3066 3095 6.090628 CAGACTCTGCAAACTTCTACAAGATC 59.909 42.308 0.00 0.00 33.34 2.75
3072 3101 4.152402 GCAAACTTCTACAAGATCGCTTCA 59.848 41.667 0.00 0.00 33.34 3.02
3077 3106 5.758296 ACTTCTACAAGATCGCTTCAAAACA 59.242 36.000 0.00 0.00 33.34 2.83
3192 3221 1.393539 CCGTTCTATGCGTTTGGTCTG 59.606 52.381 0.00 0.00 0.00 3.51
3198 3227 0.744414 ATGCGTTTGGTCTGGGATCG 60.744 55.000 0.00 0.00 0.00 3.69
3282 3311 0.321671 TTCAGAAGCTGGAAGACGGG 59.678 55.000 0.00 0.00 34.07 5.28
3303 3332 2.603473 TGGTGCCACGAGCCTAGT 60.603 61.111 0.00 0.00 42.71 2.57
3399 3428 5.175673 GCACAGTTTCAGTAAATCTTTTGGC 59.824 40.000 0.00 0.00 0.00 4.52
3454 3483 1.692411 GCCTTTTGTTGAGAGTGGGT 58.308 50.000 0.00 0.00 0.00 4.51
3482 3511 1.599047 CCATGGACAAGGAGCGAGT 59.401 57.895 5.56 0.00 0.00 4.18
3631 3672 2.614057 GGGACTATTTCGCCATGACAAG 59.386 50.000 0.00 0.00 0.00 3.16
3757 3961 7.821846 TGGGATCCATAGCAATTTTTGTTTTAC 59.178 33.333 15.23 0.00 0.00 2.01
3779 3983 8.715191 TTACAAAATTGTTCAATTGTTCAGCT 57.285 26.923 10.84 0.00 42.35 4.24
3786 3990 0.675083 CAATTGTTCAGCTGGCACCA 59.325 50.000 15.13 3.54 0.00 4.17
3793 3998 1.968017 CAGCTGGCACCAATCGTGT 60.968 57.895 5.57 0.00 44.97 4.49
3805 4010 2.482721 CCAATCGTGTGTTTACCAGACC 59.517 50.000 0.00 0.00 33.89 3.85
3812 4017 1.065636 GTGTTTACCAGACCCCTAGCC 60.066 57.143 0.00 0.00 0.00 3.93
3817 4022 4.162690 CAGACCCCTAGCCGGTGC 62.163 72.222 1.90 0.00 32.27 5.01
3829 4034 1.701704 GCCGGTGCTTTCTGAATTTG 58.298 50.000 1.90 0.00 33.53 2.32
3852 4057 2.242797 TTAACGGGGCGCCTTCTACC 62.243 60.000 28.56 17.75 0.00 3.18
3882 4087 0.460987 GTTCGCACCTCCTGAGATGG 60.461 60.000 0.00 0.00 0.00 3.51
3894 4099 5.833667 CCTCCTGAGATGGTAATGTAGTGTA 59.166 44.000 0.00 0.00 0.00 2.90
3935 4140 2.111384 TGTTTTGGCAAGGCTTGGTTA 58.889 42.857 27.25 1.16 0.00 2.85
3936 4141 2.703007 TGTTTTGGCAAGGCTTGGTTAT 59.297 40.909 27.25 0.00 0.00 1.89
3956 4161 8.136800 TGGTTATTGATAATGTGCACATGAATC 58.863 33.333 31.98 31.11 36.56 2.52
3958 4163 5.816449 TTGATAATGTGCACATGAATCGT 57.184 34.783 31.98 17.81 36.56 3.73
3972 4177 1.997606 GAATCGTTTAGTGGTCACGGG 59.002 52.381 0.00 0.00 34.61 5.28
3978 4183 0.178955 TTAGTGGTCACGGGGTCTGA 60.179 55.000 0.00 0.00 36.20 3.27
3981 4186 1.762858 TGGTCACGGGGTCTGAACA 60.763 57.895 0.00 0.00 32.77 3.18
3990 4195 2.222027 GGGGTCTGAACACTGAACTTG 58.778 52.381 0.00 0.00 0.00 3.16
3992 4197 3.541632 GGGTCTGAACACTGAACTTGAA 58.458 45.455 0.00 0.00 0.00 2.69
4007 4212 2.149578 CTTGAACTGCTGGTCCTGAAG 58.850 52.381 6.15 2.11 0.00 3.02
4018 4223 3.251484 TGGTCCTGAAGAGAATCCTTGT 58.749 45.455 0.00 0.00 33.66 3.16
4051 4256 5.174395 ACAGAAAGGATCGTCTTCAAGATG 58.826 41.667 0.00 0.00 32.57 2.90
4070 4275 2.856000 AGGGCCTCAGCACCAACT 60.856 61.111 0.00 0.00 46.94 3.16
4072 4277 2.113986 GGCCTCAGCACCAACTGT 59.886 61.111 0.00 0.00 42.56 3.55
4090 4295 0.234884 GTTGTGTACGCTGTGCCTTC 59.765 55.000 8.10 0.00 0.00 3.46
4116 4321 4.521146 AGCCTGAAACGATGAATCATCTT 58.479 39.130 19.62 8.94 38.59 2.40
4117 4322 4.334759 AGCCTGAAACGATGAATCATCTTG 59.665 41.667 19.62 8.78 38.59 3.02
4121 4326 7.467811 GCCTGAAACGATGAATCATCTTGTAAT 60.468 37.037 19.62 5.69 38.59 1.89
4128 4333 5.239359 TGAATCATCTTGTAATGCAGTGC 57.761 39.130 8.58 8.58 0.00 4.40
4135 4340 2.512692 TGTAATGCAGTGCCCATTCT 57.487 45.000 13.72 0.00 34.87 2.40
4138 4343 0.040058 AATGCAGTGCCCATTCTCCA 59.960 50.000 13.72 0.00 0.00 3.86
4158 4363 1.349026 AGGACTGTCTGGTCATTGGTG 59.651 52.381 7.85 0.00 37.91 4.17
4190 4395 0.185901 AATATTGCCATCCCGTGCCT 59.814 50.000 0.00 0.00 0.00 4.75
4193 4398 2.215451 ATTGCCATCCCGTGCCTTCT 62.215 55.000 0.00 0.00 0.00 2.85
4194 4399 2.044946 GCCATCCCGTGCCTTCTT 60.045 61.111 0.00 0.00 0.00 2.52
4195 4400 1.678970 GCCATCCCGTGCCTTCTTT 60.679 57.895 0.00 0.00 0.00 2.52
4216 4421 6.260050 TCTTTAGCAAAATTCAGTTCTCGTGT 59.740 34.615 0.00 0.00 0.00 4.49
4217 4422 4.214980 AGCAAAATTCAGTTCTCGTGTG 57.785 40.909 0.00 0.00 0.00 3.82
4219 4424 3.968724 GCAAAATTCAGTTCTCGTGTGTC 59.031 43.478 0.00 0.00 0.00 3.67
4222 4427 0.596600 TTCAGTTCTCGTGTGTCGGC 60.597 55.000 0.00 0.00 40.32 5.54
4227 4432 4.778415 CTCGTGTGTCGGCGGGAG 62.778 72.222 7.21 0.98 40.32 4.30
4241 4446 3.706373 GGAGGAGGTGCTCGCCAA 61.706 66.667 2.02 0.00 37.84 4.52
4242 4447 2.586792 GAGGAGGTGCTCGCCAAT 59.413 61.111 2.02 0.00 37.84 3.16
4243 4448 1.078143 GAGGAGGTGCTCGCCAATT 60.078 57.895 2.02 0.00 37.84 2.32
4244 4449 0.178068 GAGGAGGTGCTCGCCAATTA 59.822 55.000 2.02 0.00 37.84 1.40
4245 4450 0.839946 AGGAGGTGCTCGCCAATTAT 59.160 50.000 2.02 0.00 37.84 1.28
4246 4451 1.202698 AGGAGGTGCTCGCCAATTATC 60.203 52.381 2.02 0.00 37.84 1.75
4247 4452 1.230324 GAGGTGCTCGCCAATTATCC 58.770 55.000 2.02 0.00 0.00 2.59
4248 4453 0.532862 AGGTGCTCGCCAATTATCCG 60.533 55.000 2.02 0.00 0.00 4.18
4249 4454 0.531974 GGTGCTCGCCAATTATCCGA 60.532 55.000 0.00 0.00 0.00 4.55
4251 4456 0.249868 TGCTCGCCAATTATCCGAGG 60.250 55.000 17.64 0.00 46.14 4.63
4252 4457 0.951040 GCTCGCCAATTATCCGAGGG 60.951 60.000 17.64 0.00 46.14 4.30
4253 4458 0.951040 CTCGCCAATTATCCGAGGGC 60.951 60.000 11.55 0.00 43.33 5.19
4254 4459 1.227823 CGCCAATTATCCGAGGGCA 60.228 57.895 0.00 0.00 44.82 5.36
4255 4460 0.817634 CGCCAATTATCCGAGGGCAA 60.818 55.000 0.00 0.00 44.82 4.52
4256 4461 1.398692 GCCAATTATCCGAGGGCAAA 58.601 50.000 0.00 0.00 44.01 3.68
4257 4462 1.067060 GCCAATTATCCGAGGGCAAAC 59.933 52.381 0.00 0.00 44.01 2.93
4258 4463 2.374184 CCAATTATCCGAGGGCAAACA 58.626 47.619 0.00 0.00 0.00 2.83
4259 4464 2.099098 CCAATTATCCGAGGGCAAACAC 59.901 50.000 0.00 0.00 0.00 3.32
4270 4475 0.597377 GGCAAACACAAAGGAAGCCG 60.597 55.000 0.00 0.00 0.00 5.52
4274 4479 4.404654 CACAAAGGAAGCCGGCGC 62.405 66.667 23.20 17.54 0.00 6.53
4286 4491 2.022129 CCGGCGCGATAATCACTCC 61.022 63.158 12.10 0.00 0.00 3.85
4328 4533 1.135333 AGAGAGGAATCGGCGAACTTC 59.865 52.381 15.93 14.38 0.00 3.01
4329 4534 1.135333 GAGAGGAATCGGCGAACTTCT 59.865 52.381 23.40 23.40 0.00 2.85
4332 4537 1.000145 GGAATCGGCGAACTTCTGAC 59.000 55.000 15.93 0.00 0.00 3.51
4335 4540 1.429463 ATCGGCGAACTTCTGACAAC 58.571 50.000 15.93 0.00 0.00 3.32
4352 4557 2.289072 ACAACATCTCAACCTCGGACAG 60.289 50.000 0.00 0.00 0.00 3.51
4376 4581 1.872952 GGTGGCAAACAAAATCCTTGC 59.127 47.619 0.00 0.00 43.75 4.01
4377 4582 1.526464 GTGGCAAACAAAATCCTTGCG 59.474 47.619 0.00 0.00 45.09 4.85
4378 4583 1.147473 GGCAAACAAAATCCTTGCGG 58.853 50.000 0.00 0.00 45.09 5.69
4379 4584 1.270041 GGCAAACAAAATCCTTGCGGA 60.270 47.619 0.00 0.00 45.09 5.54
4380 4585 2.061028 GCAAACAAAATCCTTGCGGAG 58.939 47.619 0.00 0.00 44.06 4.63
4381 4586 2.545742 GCAAACAAAATCCTTGCGGAGT 60.546 45.455 0.00 0.00 44.06 3.85
4382 4587 3.052036 CAAACAAAATCCTTGCGGAGTG 58.948 45.455 0.00 0.00 44.06 3.51
4383 4588 2.270352 ACAAAATCCTTGCGGAGTGA 57.730 45.000 0.00 0.00 44.06 3.41
4384 4589 1.880027 ACAAAATCCTTGCGGAGTGAC 59.120 47.619 0.00 0.00 44.06 3.67
4385 4590 1.200020 CAAAATCCTTGCGGAGTGACC 59.800 52.381 0.00 0.00 44.06 4.02
4386 4591 0.400213 AAATCCTTGCGGAGTGACCA 59.600 50.000 0.00 0.00 44.06 4.02
4387 4592 0.620556 AATCCTTGCGGAGTGACCAT 59.379 50.000 0.00 0.00 44.06 3.55
4388 4593 0.620556 ATCCTTGCGGAGTGACCATT 59.379 50.000 0.00 0.00 44.06 3.16
4389 4594 0.036388 TCCTTGCGGAGTGACCATTC 60.036 55.000 0.00 0.00 38.90 2.67
4390 4595 1.026718 CCTTGCGGAGTGACCATTCC 61.027 60.000 1.87 1.87 38.90 3.01
4391 4596 0.036010 CTTGCGGAGTGACCATTCCT 60.036 55.000 9.41 0.00 38.90 3.36
4392 4597 1.207089 CTTGCGGAGTGACCATTCCTA 59.793 52.381 9.41 0.00 38.90 2.94
4393 4598 1.271856 TGCGGAGTGACCATTCCTAA 58.728 50.000 9.41 0.00 38.90 2.69
4394 4599 1.626321 TGCGGAGTGACCATTCCTAAA 59.374 47.619 9.41 0.00 38.90 1.85
4395 4600 2.039216 TGCGGAGTGACCATTCCTAAAA 59.961 45.455 9.41 0.00 38.90 1.52
4396 4601 2.418976 GCGGAGTGACCATTCCTAAAAC 59.581 50.000 9.41 0.00 38.90 2.43
4397 4602 3.670625 CGGAGTGACCATTCCTAAAACA 58.329 45.455 9.41 0.00 38.90 2.83
4398 4603 4.069304 CGGAGTGACCATTCCTAAAACAA 58.931 43.478 9.41 0.00 38.90 2.83
4399 4604 4.517453 CGGAGTGACCATTCCTAAAACAAA 59.483 41.667 9.41 0.00 38.90 2.83
4400 4605 5.183140 CGGAGTGACCATTCCTAAAACAAAT 59.817 40.000 9.41 0.00 38.90 2.32
4401 4606 6.621613 GGAGTGACCATTCCTAAAACAAATC 58.378 40.000 4.53 0.00 38.79 2.17
4402 4607 6.350194 GGAGTGACCATTCCTAAAACAAATCC 60.350 42.308 4.53 0.00 38.79 3.01
4403 4608 6.314917 AGTGACCATTCCTAAAACAAATCCT 58.685 36.000 0.00 0.00 0.00 3.24
4404 4609 6.782494 AGTGACCATTCCTAAAACAAATCCTT 59.218 34.615 0.00 0.00 0.00 3.36
4405 4610 6.868339 GTGACCATTCCTAAAACAAATCCTTG 59.132 38.462 0.00 0.00 38.61 3.61
4413 4618 4.670896 AAAACAAATCCTTGTGGAGTGG 57.329 40.909 0.00 0.00 45.25 4.00
4439 4644 4.214332 GCTATGGAAACTAGCTTGGCATAC 59.786 45.833 0.00 0.00 38.82 2.39
4449 4654 1.576356 CTTGGCATACGAAGAGGAGC 58.424 55.000 0.00 0.00 0.00 4.70
4454 4670 0.872021 CATACGAAGAGGAGCGGTGC 60.872 60.000 0.00 0.00 0.00 5.01
4466 4682 3.016474 GCGGTGCGAGAACAAGAGC 62.016 63.158 0.00 0.00 0.00 4.09
4467 4683 2.720758 CGGTGCGAGAACAAGAGCG 61.721 63.158 0.00 0.00 0.00 5.03
4469 4685 0.944311 GGTGCGAGAACAAGAGCGAA 60.944 55.000 0.00 0.00 0.00 4.70
4471 4687 1.461127 GTGCGAGAACAAGAGCGAAAT 59.539 47.619 0.00 0.00 0.00 2.17
4472 4688 1.726791 TGCGAGAACAAGAGCGAAATC 59.273 47.619 0.00 0.00 0.00 2.17
4473 4689 1.061276 GCGAGAACAAGAGCGAAATCC 59.939 52.381 0.00 0.00 0.00 3.01
4474 4690 1.661112 CGAGAACAAGAGCGAAATCCC 59.339 52.381 0.00 0.00 0.00 3.85
4503 4722 0.550914 GGGGTGGATGTGGATTGCTA 59.449 55.000 0.00 0.00 0.00 3.49
4507 4726 2.216898 GTGGATGTGGATTGCTAGAGC 58.783 52.381 0.00 0.00 42.50 4.09
4530 4749 6.541641 AGCCTTTCTTCTTTAGCATCATGTAG 59.458 38.462 0.00 0.00 0.00 2.74
4533 4752 7.712639 CCTTTCTTCTTTAGCATCATGTAGCTA 59.287 37.037 14.80 14.80 42.05 3.32
4543 4762 7.313951 AGCATCATGTAGCTAAAACTCTTTC 57.686 36.000 11.90 0.00 39.78 2.62
4544 4763 6.881065 AGCATCATGTAGCTAAAACTCTTTCA 59.119 34.615 11.90 0.00 39.78 2.69
4545 4764 7.391554 AGCATCATGTAGCTAAAACTCTTTCAA 59.608 33.333 11.90 0.00 39.78 2.69
4549 4768 9.507329 TCATGTAGCTAAAACTCTTTCAATCTT 57.493 29.630 0.00 0.00 0.00 2.40
4581 4810 2.788535 GCAAAGCTCTTGCGTGTTC 58.211 52.632 14.80 0.00 45.42 3.18
4582 4811 0.661483 GCAAAGCTCTTGCGTGTTCC 60.661 55.000 14.80 0.00 45.42 3.62
4622 4851 2.125753 GCAGTCAGGTGCCGAGAG 60.126 66.667 0.00 0.00 37.49 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.997021 AGGTTTCAAAGAGCGTGTATGAG 59.003 43.478 0.00 0.00 0.00 2.90
2 3 4.749245 AAGGTTTCAAAGAGCGTGTATG 57.251 40.909 0.00 0.00 0.00 2.39
9 10 5.237127 CCCAAATTCAAAGGTTTCAAAGAGC 59.763 40.000 0.00 0.00 0.00 4.09
11 12 6.552445 TCCCAAATTCAAAGGTTTCAAAGA 57.448 33.333 0.00 0.00 0.00 2.52
12 13 7.641760 CATTCCCAAATTCAAAGGTTTCAAAG 58.358 34.615 0.00 0.00 0.00 2.77
13 14 6.039159 GCATTCCCAAATTCAAAGGTTTCAAA 59.961 34.615 0.00 0.00 0.00 2.69
15 16 5.062528 GCATTCCCAAATTCAAAGGTTTCA 58.937 37.500 0.00 0.00 0.00 2.69
16 17 5.049474 GTGCATTCCCAAATTCAAAGGTTTC 60.049 40.000 0.00 0.00 0.00 2.78
18 19 4.388485 GTGCATTCCCAAATTCAAAGGTT 58.612 39.130 0.00 0.00 0.00 3.50
19 20 3.244526 GGTGCATTCCCAAATTCAAAGGT 60.245 43.478 0.00 0.00 0.00 3.50
21 22 4.005487 TGGTGCATTCCCAAATTCAAAG 57.995 40.909 0.00 0.00 0.00 2.77
22 23 4.202440 ACATGGTGCATTCCCAAATTCAAA 60.202 37.500 0.00 0.00 35.14 2.69
23 24 3.327172 ACATGGTGCATTCCCAAATTCAA 59.673 39.130 0.00 0.00 35.14 2.69
24 25 2.905085 ACATGGTGCATTCCCAAATTCA 59.095 40.909 0.00 0.00 35.14 2.57
25 26 3.264104 CACATGGTGCATTCCCAAATTC 58.736 45.455 0.00 0.00 35.14 2.17
26 27 3.337694 CACATGGTGCATTCCCAAATT 57.662 42.857 0.00 0.00 35.14 1.82
38 39 0.311790 AAGCGAACTTGCACATGGTG 59.688 50.000 0.00 0.00 37.31 4.17
39 40 0.311790 CAAGCGAACTTGCACATGGT 59.688 50.000 0.00 0.00 46.38 3.55
40 41 3.096541 CAAGCGAACTTGCACATGG 57.903 52.632 0.00 0.00 46.38 3.66
48 49 0.814010 AACTGCGGACAAGCGAACTT 60.814 50.000 0.00 0.00 40.67 2.66
49 50 0.814010 AAACTGCGGACAAGCGAACT 60.814 50.000 0.00 0.00 40.67 3.01
50 51 0.384353 GAAACTGCGGACAAGCGAAC 60.384 55.000 0.00 0.00 40.67 3.95
51 52 0.531974 AGAAACTGCGGACAAGCGAA 60.532 50.000 0.00 0.00 40.67 4.70
52 53 0.531974 AAGAAACTGCGGACAAGCGA 60.532 50.000 0.00 0.00 40.67 4.93
53 54 0.110644 GAAGAAACTGCGGACAAGCG 60.111 55.000 0.00 0.00 40.67 4.68
54 55 0.944386 TGAAGAAACTGCGGACAAGC 59.056 50.000 0.00 0.00 37.71 4.01
55 56 2.032549 CAGTGAAGAAACTGCGGACAAG 60.033 50.000 0.00 0.00 41.05 3.16
56 57 1.939934 CAGTGAAGAAACTGCGGACAA 59.060 47.619 0.00 0.00 41.05 3.18
57 58 1.581934 CAGTGAAGAAACTGCGGACA 58.418 50.000 0.00 0.00 41.05 4.02
58 59 0.868406 CCAGTGAAGAAACTGCGGAC 59.132 55.000 0.00 0.00 45.17 4.79
59 60 0.756294 TCCAGTGAAGAAACTGCGGA 59.244 50.000 0.00 0.00 45.17 5.54
60 61 1.466167 CATCCAGTGAAGAAACTGCGG 59.534 52.381 0.00 0.00 45.17 5.69
61 62 2.146342 ACATCCAGTGAAGAAACTGCG 58.854 47.619 0.00 0.00 45.17 5.18
62 63 4.036734 TCAAACATCCAGTGAAGAAACTGC 59.963 41.667 0.00 0.00 45.17 4.40
63 64 5.756195 TCAAACATCCAGTGAAGAAACTG 57.244 39.130 0.00 0.00 45.93 3.16
69 70 6.799512 ACTTTTCTTCAAACATCCAGTGAAG 58.200 36.000 6.34 6.34 46.29 3.02
70 71 6.458206 CGACTTTTCTTCAAACATCCAGTGAA 60.458 38.462 0.00 0.00 0.00 3.18
71 72 5.007626 CGACTTTTCTTCAAACATCCAGTGA 59.992 40.000 0.00 0.00 0.00 3.41
72 73 5.007626 TCGACTTTTCTTCAAACATCCAGTG 59.992 40.000 0.00 0.00 0.00 3.66
73 74 5.123227 TCGACTTTTCTTCAAACATCCAGT 58.877 37.500 0.00 0.00 0.00 4.00
74 75 5.466728 TCTCGACTTTTCTTCAAACATCCAG 59.533 40.000 0.00 0.00 0.00 3.86
75 76 5.364778 TCTCGACTTTTCTTCAAACATCCA 58.635 37.500 0.00 0.00 0.00 3.41
76 77 5.924475 TCTCGACTTTTCTTCAAACATCC 57.076 39.130 0.00 0.00 0.00 3.51
77 78 5.792468 GCATCTCGACTTTTCTTCAAACATC 59.208 40.000 0.00 0.00 0.00 3.06
78 79 5.239306 TGCATCTCGACTTTTCTTCAAACAT 59.761 36.000 0.00 0.00 0.00 2.71
79 80 4.574421 TGCATCTCGACTTTTCTTCAAACA 59.426 37.500 0.00 0.00 0.00 2.83
80 81 5.095691 TGCATCTCGACTTTTCTTCAAAC 57.904 39.130 0.00 0.00 0.00 2.93
81 82 5.527214 TCTTGCATCTCGACTTTTCTTCAAA 59.473 36.000 0.00 0.00 0.00 2.69
82 83 5.056480 TCTTGCATCTCGACTTTTCTTCAA 58.944 37.500 0.00 0.00 0.00 2.69
83 84 4.631131 TCTTGCATCTCGACTTTTCTTCA 58.369 39.130 0.00 0.00 0.00 3.02
84 85 4.926238 TCTCTTGCATCTCGACTTTTCTTC 59.074 41.667 0.00 0.00 0.00 2.87
85 86 4.688413 GTCTCTTGCATCTCGACTTTTCTT 59.312 41.667 0.00 0.00 0.00 2.52
86 87 4.241681 GTCTCTTGCATCTCGACTTTTCT 58.758 43.478 0.00 0.00 0.00 2.52
87 88 3.060098 CGTCTCTTGCATCTCGACTTTTC 59.940 47.826 0.00 0.00 0.00 2.29
88 89 2.989840 CGTCTCTTGCATCTCGACTTTT 59.010 45.455 0.00 0.00 0.00 2.27
89 90 2.229062 TCGTCTCTTGCATCTCGACTTT 59.771 45.455 0.00 0.00 0.00 2.66
90 91 1.813178 TCGTCTCTTGCATCTCGACTT 59.187 47.619 0.00 0.00 0.00 3.01
91 92 1.400142 CTCGTCTCTTGCATCTCGACT 59.600 52.381 0.00 0.00 0.00 4.18
92 93 1.131504 ACTCGTCTCTTGCATCTCGAC 59.868 52.381 0.00 0.00 0.00 4.20
93 94 1.398739 GACTCGTCTCTTGCATCTCGA 59.601 52.381 0.00 0.00 0.00 4.04
94 95 1.400142 AGACTCGTCTCTTGCATCTCG 59.600 52.381 0.00 0.00 34.17 4.04
95 96 2.479389 CCAGACTCGTCTCTTGCATCTC 60.479 54.545 0.00 0.00 37.98 2.75
96 97 1.476085 CCAGACTCGTCTCTTGCATCT 59.524 52.381 0.00 0.00 37.98 2.90
97 98 1.474478 TCCAGACTCGTCTCTTGCATC 59.526 52.381 0.00 0.00 37.98 3.91
98 99 1.476085 CTCCAGACTCGTCTCTTGCAT 59.524 52.381 0.00 0.00 37.98 3.96
99 100 0.884514 CTCCAGACTCGTCTCTTGCA 59.115 55.000 0.00 0.00 37.98 4.08
100 101 0.885196 ACTCCAGACTCGTCTCTTGC 59.115 55.000 0.00 0.00 37.98 4.01
101 102 2.155279 TGACTCCAGACTCGTCTCTTG 58.845 52.381 0.00 0.00 37.98 3.02
102 103 2.570415 TGACTCCAGACTCGTCTCTT 57.430 50.000 0.00 0.00 37.98 2.85
103 104 2.570415 TTGACTCCAGACTCGTCTCT 57.430 50.000 0.00 0.00 37.98 3.10
104 105 2.750166 TCATTGACTCCAGACTCGTCTC 59.250 50.000 0.00 0.00 37.98 3.36
105 106 2.490115 GTCATTGACTCCAGACTCGTCT 59.510 50.000 9.59 0.00 41.37 4.18
106 107 2.490115 AGTCATTGACTCCAGACTCGTC 59.510 50.000 13.61 0.00 38.71 4.20
107 108 2.520069 AGTCATTGACTCCAGACTCGT 58.480 47.619 13.61 0.00 38.71 4.18
108 109 3.181495 GGTAGTCATTGACTCCAGACTCG 60.181 52.174 22.16 0.00 42.40 4.18
109 110 3.764434 TGGTAGTCATTGACTCCAGACTC 59.236 47.826 22.16 9.77 42.40 3.36
110 111 3.779444 TGGTAGTCATTGACTCCAGACT 58.221 45.455 22.16 0.29 42.40 3.24
111 112 4.499183 CTTGGTAGTCATTGACTCCAGAC 58.501 47.826 22.16 14.44 42.40 3.51
112 113 3.515502 CCTTGGTAGTCATTGACTCCAGA 59.484 47.826 22.16 16.08 42.40 3.86
113 114 3.515502 TCCTTGGTAGTCATTGACTCCAG 59.484 47.826 22.16 18.42 42.40 3.86
114 115 3.260884 GTCCTTGGTAGTCATTGACTCCA 59.739 47.826 22.16 22.71 42.40 3.86
115 116 3.515901 AGTCCTTGGTAGTCATTGACTCC 59.484 47.826 22.16 20.77 42.40 3.85
116 117 4.810191 AGTCCTTGGTAGTCATTGACTC 57.190 45.455 22.16 13.54 42.40 3.36
117 118 5.568620 AAAGTCCTTGGTAGTCATTGACT 57.431 39.130 22.16 22.16 45.54 3.41
118 119 5.763204 TCAAAAGTCCTTGGTAGTCATTGAC 59.237 40.000 8.82 8.82 0.00 3.18
119 120 5.935945 TCAAAAGTCCTTGGTAGTCATTGA 58.064 37.500 0.00 0.00 0.00 2.57
120 121 6.207417 ACATCAAAAGTCCTTGGTAGTCATTG 59.793 38.462 0.00 0.00 0.00 2.82
121 122 6.306987 ACATCAAAAGTCCTTGGTAGTCATT 58.693 36.000 0.00 0.00 0.00 2.57
122 123 5.880901 ACATCAAAAGTCCTTGGTAGTCAT 58.119 37.500 0.00 0.00 0.00 3.06
123 124 5.304686 ACATCAAAAGTCCTTGGTAGTCA 57.695 39.130 0.00 0.00 0.00 3.41
124 125 6.935208 AGTTACATCAAAAGTCCTTGGTAGTC 59.065 38.462 0.00 0.00 0.00 2.59
125 126 6.838382 AGTTACATCAAAAGTCCTTGGTAGT 58.162 36.000 0.00 0.00 0.00 2.73
126 127 7.745620 AAGTTACATCAAAAGTCCTTGGTAG 57.254 36.000 0.00 0.00 0.00 3.18
127 128 9.802039 ATAAAGTTACATCAAAAGTCCTTGGTA 57.198 29.630 0.00 0.00 0.00 3.25
128 129 8.706322 ATAAAGTTACATCAAAAGTCCTTGGT 57.294 30.769 0.00 0.00 0.00 3.67
129 130 9.981114 AAATAAAGTTACATCAAAAGTCCTTGG 57.019 29.630 0.00 0.00 0.00 3.61
204 205 9.509855 GTTTGTTGATAGTTTACACAAATCACA 57.490 29.630 0.00 0.00 30.99 3.58
205 206 9.509855 TGTTTGTTGATAGTTTACACAAATCAC 57.490 29.630 0.00 0.00 30.99 3.06
208 209 9.474920 CCATGTTTGTTGATAGTTTACACAAAT 57.525 29.630 0.00 0.00 0.00 2.32
209 210 8.470805 ACCATGTTTGTTGATAGTTTACACAAA 58.529 29.630 0.00 0.00 0.00 2.83
210 211 8.001881 ACCATGTTTGTTGATAGTTTACACAA 57.998 30.769 0.00 0.00 0.00 3.33
211 212 7.575414 ACCATGTTTGTTGATAGTTTACACA 57.425 32.000 0.00 0.00 0.00 3.72
212 213 9.953697 TTAACCATGTTTGTTGATAGTTTACAC 57.046 29.630 0.00 0.00 0.00 2.90
217 218 9.834628 CGTATTTAACCATGTTTGTTGATAGTT 57.165 29.630 0.00 0.00 0.00 2.24
218 219 9.221933 TCGTATTTAACCATGTTTGTTGATAGT 57.778 29.630 0.00 0.00 0.00 2.12
219 220 9.485591 GTCGTATTTAACCATGTTTGTTGATAG 57.514 33.333 0.00 0.00 0.00 2.08
220 221 8.169910 CGTCGTATTTAACCATGTTTGTTGATA 58.830 33.333 0.00 0.00 0.00 2.15
221 222 7.018826 CGTCGTATTTAACCATGTTTGTTGAT 58.981 34.615 0.00 0.00 0.00 2.57
222 223 6.364261 CGTCGTATTTAACCATGTTTGTTGA 58.636 36.000 0.00 0.00 0.00 3.18
223 224 5.058734 GCGTCGTATTTAACCATGTTTGTTG 59.941 40.000 0.00 0.00 0.00 3.33
224 225 5.049267 AGCGTCGTATTTAACCATGTTTGTT 60.049 36.000 0.00 0.00 0.00 2.83
225 226 4.453136 AGCGTCGTATTTAACCATGTTTGT 59.547 37.500 0.00 0.00 0.00 2.83
226 227 4.965062 AGCGTCGTATTTAACCATGTTTG 58.035 39.130 0.00 0.00 0.00 2.93
227 228 4.201647 CGAGCGTCGTATTTAACCATGTTT 60.202 41.667 0.00 0.00 34.72 2.83
228 229 3.305094 CGAGCGTCGTATTTAACCATGTT 59.695 43.478 0.00 0.00 34.72 2.71
229 230 2.855963 CGAGCGTCGTATTTAACCATGT 59.144 45.455 0.00 0.00 34.72 3.21
230 231 3.483261 CGAGCGTCGTATTTAACCATG 57.517 47.619 0.00 0.00 34.72 3.66
242 243 2.101770 GAAGGGGTACGAGCGTCG 59.898 66.667 0.00 5.97 46.93 5.12
243 244 2.101770 CGAAGGGGTACGAGCGTC 59.898 66.667 0.00 0.00 0.00 5.19
244 245 4.125695 GCGAAGGGGTACGAGCGT 62.126 66.667 0.00 0.00 0.00 5.07
245 246 3.753070 GAGCGAAGGGGTACGAGCG 62.753 68.421 0.00 0.00 0.00 5.03
246 247 2.104530 GAGCGAAGGGGTACGAGC 59.895 66.667 0.00 0.00 0.00 5.03
247 248 0.465097 TAGGAGCGAAGGGGTACGAG 60.465 60.000 0.00 0.00 30.08 4.18
248 249 0.465097 CTAGGAGCGAAGGGGTACGA 60.465 60.000 0.00 0.00 30.08 3.43
249 250 1.453762 CCTAGGAGCGAAGGGGTACG 61.454 65.000 1.05 0.00 30.08 3.67
250 251 1.746322 GCCTAGGAGCGAAGGGGTAC 61.746 65.000 14.75 0.00 33.17 3.34
251 252 1.457079 GCCTAGGAGCGAAGGGGTA 60.457 63.158 14.75 0.00 33.17 3.69
252 253 2.764547 GCCTAGGAGCGAAGGGGT 60.765 66.667 14.75 0.00 33.17 4.95
253 254 2.764128 TGCCTAGGAGCGAAGGGG 60.764 66.667 14.75 0.00 33.17 4.79
254 255 2.060980 ACTGCCTAGGAGCGAAGGG 61.061 63.158 14.75 0.00 33.17 3.95
255 256 1.142748 CACTGCCTAGGAGCGAAGG 59.857 63.158 14.75 0.00 35.86 3.46
256 257 1.142748 CCACTGCCTAGGAGCGAAG 59.857 63.158 14.75 3.69 34.65 3.79
257 258 0.902984 TTCCACTGCCTAGGAGCGAA 60.903 55.000 14.75 9.49 34.91 4.70
258 259 1.304962 TTCCACTGCCTAGGAGCGA 60.305 57.895 14.75 4.04 34.91 4.93
259 260 1.153549 GTTCCACTGCCTAGGAGCG 60.154 63.158 14.75 1.55 34.91 5.03
260 261 1.222113 GGTTCCACTGCCTAGGAGC 59.778 63.158 14.75 0.00 34.91 4.70
261 262 0.618968 AGGGTTCCACTGCCTAGGAG 60.619 60.000 14.75 9.76 34.91 3.69
262 263 0.909610 CAGGGTTCCACTGCCTAGGA 60.910 60.000 14.75 0.00 0.00 2.94
263 264 1.201429 ACAGGGTTCCACTGCCTAGG 61.201 60.000 3.67 3.67 39.55 3.02
264 265 0.250513 GACAGGGTTCCACTGCCTAG 59.749 60.000 0.00 0.00 39.55 3.02
265 266 0.472925 TGACAGGGTTCCACTGCCTA 60.473 55.000 0.00 0.00 39.55 3.93
266 267 1.770110 TGACAGGGTTCCACTGCCT 60.770 57.895 0.00 0.00 39.55 4.75
267 268 1.600916 GTGACAGGGTTCCACTGCC 60.601 63.158 0.00 0.00 39.55 4.85
268 269 0.685097 TAGTGACAGGGTTCCACTGC 59.315 55.000 0.00 0.00 40.86 4.40
269 270 1.971357 ACTAGTGACAGGGTTCCACTG 59.029 52.381 0.00 0.00 40.86 3.66
270 271 1.971357 CACTAGTGACAGGGTTCCACT 59.029 52.381 18.45 0.00 42.94 4.00
271 272 1.692519 ACACTAGTGACAGGGTTCCAC 59.307 52.381 29.30 0.00 0.00 4.02
272 273 2.097110 ACACTAGTGACAGGGTTCCA 57.903 50.000 29.30 0.00 0.00 3.53
273 274 3.487120 AAACACTAGTGACAGGGTTCC 57.513 47.619 29.30 0.00 41.33 3.62
274 275 3.813724 GGAAAACACTAGTGACAGGGTTC 59.186 47.826 29.30 18.63 41.33 3.62
275 276 3.743269 CGGAAAACACTAGTGACAGGGTT 60.743 47.826 29.30 9.04 44.07 4.11
276 277 2.224209 CGGAAAACACTAGTGACAGGGT 60.224 50.000 29.30 2.44 31.97 4.34
277 278 2.224209 ACGGAAAACACTAGTGACAGGG 60.224 50.000 29.30 14.68 0.00 4.45
278 279 2.800544 CACGGAAAACACTAGTGACAGG 59.199 50.000 29.30 14.19 35.03 4.00
279 280 2.221055 GCACGGAAAACACTAGTGACAG 59.779 50.000 29.30 17.59 35.03 3.51
280 281 2.206750 GCACGGAAAACACTAGTGACA 58.793 47.619 29.30 0.00 35.03 3.58
281 282 1.529865 GGCACGGAAAACACTAGTGAC 59.470 52.381 29.30 15.55 35.03 3.67
282 283 1.414919 AGGCACGGAAAACACTAGTGA 59.585 47.619 29.30 0.00 35.03 3.41
283 284 1.798813 GAGGCACGGAAAACACTAGTG 59.201 52.381 21.44 21.44 36.05 2.74
284 285 1.270678 GGAGGCACGGAAAACACTAGT 60.271 52.381 0.00 0.00 0.00 2.57
285 286 1.439679 GGAGGCACGGAAAACACTAG 58.560 55.000 0.00 0.00 0.00 2.57
286 287 0.035739 GGGAGGCACGGAAAACACTA 59.964 55.000 0.00 0.00 0.00 2.74
287 288 1.228154 GGGAGGCACGGAAAACACT 60.228 57.895 0.00 0.00 0.00 3.55
288 289 2.613506 CGGGAGGCACGGAAAACAC 61.614 63.158 0.00 0.00 0.00 3.32
289 290 2.281208 CGGGAGGCACGGAAAACA 60.281 61.111 0.00 0.00 0.00 2.83
290 291 3.733960 GCGGGAGGCACGGAAAAC 61.734 66.667 0.00 0.00 42.87 2.43
303 304 4.641645 TTCAGGTGTGCTGGCGGG 62.642 66.667 0.00 0.00 0.00 6.13
304 305 3.052082 CTTCAGGTGTGCTGGCGG 61.052 66.667 0.00 0.00 0.00 6.13
305 306 3.052082 CCTTCAGGTGTGCTGGCG 61.052 66.667 0.00 0.00 0.00 5.69
306 307 3.368571 GCCTTCAGGTGTGCTGGC 61.369 66.667 0.00 0.00 37.57 4.85
307 308 2.674380 GGCCTTCAGGTGTGCTGG 60.674 66.667 0.00 0.00 37.57 4.85
308 309 1.303888 ATGGCCTTCAGGTGTGCTG 60.304 57.895 3.32 0.00 37.57 4.41
309 310 1.303888 CATGGCCTTCAGGTGTGCT 60.304 57.895 3.32 0.00 37.57 4.40
310 311 2.345760 CCATGGCCTTCAGGTGTGC 61.346 63.158 3.32 0.00 37.57 4.57
311 312 0.033796 ATCCATGGCCTTCAGGTGTG 60.034 55.000 6.96 0.00 37.57 3.82
312 313 0.257039 GATCCATGGCCTTCAGGTGT 59.743 55.000 6.96 0.00 37.57 4.16
313 314 0.466922 GGATCCATGGCCTTCAGGTG 60.467 60.000 6.96 0.00 37.57 4.00
314 315 0.920763 TGGATCCATGGCCTTCAGGT 60.921 55.000 11.44 0.00 37.57 4.00
315 316 0.481567 ATGGATCCATGGCCTTCAGG 59.518 55.000 26.78 0.00 35.03 3.86
331 332 1.504912 AGAGTCAGGATCCACCATGG 58.495 55.000 15.82 11.19 42.04 3.66
332 333 2.915349 CAAGAGTCAGGATCCACCATG 58.085 52.381 15.82 3.14 42.04 3.66
333 334 1.211457 GCAAGAGTCAGGATCCACCAT 59.789 52.381 15.82 0.00 42.04 3.55
334 335 0.615331 GCAAGAGTCAGGATCCACCA 59.385 55.000 15.82 0.00 42.04 4.17
335 336 0.107459 GGCAAGAGTCAGGATCCACC 60.107 60.000 15.82 0.43 39.35 4.61
336 337 0.615331 TGGCAAGAGTCAGGATCCAC 59.385 55.000 15.82 4.06 0.00 4.02
337 338 1.003580 GTTGGCAAGAGTCAGGATCCA 59.996 52.381 15.82 0.00 0.00 3.41
338 339 1.743996 GTTGGCAAGAGTCAGGATCC 58.256 55.000 2.48 2.48 0.00 3.36
339 340 1.363744 CGTTGGCAAGAGTCAGGATC 58.636 55.000 0.00 0.00 0.00 3.36
340 341 0.036010 CCGTTGGCAAGAGTCAGGAT 60.036 55.000 0.00 0.00 0.00 3.24
341 342 1.371183 CCGTTGGCAAGAGTCAGGA 59.629 57.895 0.00 0.00 0.00 3.86
342 343 1.672356 CCCGTTGGCAAGAGTCAGG 60.672 63.158 0.00 0.00 0.00 3.86
343 344 0.671781 CTCCCGTTGGCAAGAGTCAG 60.672 60.000 0.00 0.00 0.00 3.51
344 345 1.371183 CTCCCGTTGGCAAGAGTCA 59.629 57.895 0.00 0.00 0.00 3.41
345 346 1.376037 CCTCCCGTTGGCAAGAGTC 60.376 63.158 0.00 0.00 0.00 3.36
346 347 2.750350 CCTCCCGTTGGCAAGAGT 59.250 61.111 0.00 0.00 0.00 3.24
353 354 0.750249 AAAACAAAGCCTCCCGTTGG 59.250 50.000 0.00 0.00 37.26 3.77
354 355 2.200899 CAAAAACAAAGCCTCCCGTTG 58.799 47.619 0.00 0.00 38.63 4.10
355 356 1.138069 CCAAAAACAAAGCCTCCCGTT 59.862 47.619 0.00 0.00 0.00 4.44
356 357 0.750249 CCAAAAACAAAGCCTCCCGT 59.250 50.000 0.00 0.00 0.00 5.28
357 358 1.036707 TCCAAAAACAAAGCCTCCCG 58.963 50.000 0.00 0.00 0.00 5.14
358 359 2.434336 ACTTCCAAAAACAAAGCCTCCC 59.566 45.455 0.00 0.00 0.00 4.30
359 360 3.819564 ACTTCCAAAAACAAAGCCTCC 57.180 42.857 0.00 0.00 0.00 4.30
360 361 6.494893 AAAAACTTCCAAAAACAAAGCCTC 57.505 33.333 0.00 0.00 0.00 4.70
386 387 8.000127 AGTAGGACACAAACCCTAACAAAATTA 59.000 33.333 0.00 0.00 36.84 1.40
417 418 1.954651 GCCGGCGCTACCTAACATC 60.955 63.158 12.58 0.00 35.61 3.06
419 420 3.072468 AGCCGGCGCTACCTAACA 61.072 61.111 23.20 0.00 46.08 2.41
429 430 1.709147 CCATCTTCAAAGAGCCGGCG 61.709 60.000 23.20 6.32 38.66 6.46
431 432 2.113860 TTCCATCTTCAAAGAGCCGG 57.886 50.000 0.00 0.00 38.66 6.13
439 441 7.690301 GCTGGGAGAGTATTATTCCATCTTCAA 60.690 40.741 0.00 0.00 32.50 2.69
442 444 5.013599 GGCTGGGAGAGTATTATTCCATCTT 59.986 44.000 0.00 0.00 32.50 2.40
448 450 3.558109 GCTGGGCTGGGAGAGTATTATTC 60.558 52.174 0.00 0.00 0.00 1.75
454 456 2.365635 GGCTGGGCTGGGAGAGTA 60.366 66.667 0.00 0.00 0.00 2.59
467 469 3.706373 AGCGGTGTACCAGGGCTG 61.706 66.667 1.50 0.00 35.14 4.85
486 489 2.669670 CGCCCTCTGACGATGCTATAAG 60.670 54.545 0.00 0.00 0.00 1.73
487 490 1.269723 CGCCCTCTGACGATGCTATAA 59.730 52.381 0.00 0.00 0.00 0.98
489 492 1.109920 ACGCCCTCTGACGATGCTAT 61.110 55.000 0.00 0.00 0.00 2.97
493 496 1.807165 CACACGCCCTCTGACGATG 60.807 63.158 0.00 0.00 0.00 3.84
496 499 1.734477 CTTCACACGCCCTCTGACG 60.734 63.158 0.00 0.00 0.00 4.35
500 503 1.071471 CAACCTTCACACGCCCTCT 59.929 57.895 0.00 0.00 0.00 3.69
501 504 1.966451 CCAACCTTCACACGCCCTC 60.966 63.158 0.00 0.00 0.00 4.30
512 515 1.630878 GATCCACCAGAGACCAACCTT 59.369 52.381 0.00 0.00 0.00 3.50
518 521 1.415659 CCATGAGATCCACCAGAGACC 59.584 57.143 0.00 0.00 0.00 3.85
519 522 1.415659 CCCATGAGATCCACCAGAGAC 59.584 57.143 0.00 0.00 0.00 3.36
524 527 2.490961 TGATTCCCATGAGATCCACCA 58.509 47.619 0.00 0.00 0.00 4.17
527 530 3.244665 CCGATTGATTCCCATGAGATCCA 60.245 47.826 0.00 0.00 0.00 3.41
535 538 1.762708 AAACGCCGATTGATTCCCAT 58.237 45.000 0.00 0.00 0.00 4.00
541 544 3.564511 CAAAGACAAAACGCCGATTGAT 58.435 40.909 12.75 1.02 0.00 2.57
544 547 1.679153 ACCAAAGACAAAACGCCGATT 59.321 42.857 0.00 0.00 0.00 3.34
551 554 7.199766 TCACATGAATACACCAAAGACAAAAC 58.800 34.615 0.00 0.00 0.00 2.43
552 555 7.340122 TCACATGAATACACCAAAGACAAAA 57.660 32.000 0.00 0.00 0.00 2.44
561 564 7.523293 AAGACAAATTCACATGAATACACCA 57.477 32.000 7.52 0.00 43.41 4.17
566 569 8.349245 ACAAACGAAGACAAATTCACATGAATA 58.651 29.630 7.52 0.00 43.41 1.75
569 572 6.038161 AGACAAACGAAGACAAATTCACATGA 59.962 34.615 0.00 0.00 0.00 3.07
572 575 5.568482 CAGACAAACGAAGACAAATTCACA 58.432 37.500 0.00 0.00 0.00 3.58
576 579 4.900635 AGCAGACAAACGAAGACAAATT 57.099 36.364 0.00 0.00 0.00 1.82
579 582 3.006940 ACAAGCAGACAAACGAAGACAA 58.993 40.909 0.00 0.00 0.00 3.18
580 583 2.351418 CACAAGCAGACAAACGAAGACA 59.649 45.455 0.00 0.00 0.00 3.41
582 585 2.607635 GACACAAGCAGACAAACGAAGA 59.392 45.455 0.00 0.00 0.00 2.87
583 586 2.609459 AGACACAAGCAGACAAACGAAG 59.391 45.455 0.00 0.00 0.00 3.79
584 587 2.607635 GAGACACAAGCAGACAAACGAA 59.392 45.455 0.00 0.00 0.00 3.85
586 589 2.205074 AGAGACACAAGCAGACAAACG 58.795 47.619 0.00 0.00 0.00 3.60
587 590 4.119862 TGTAGAGACACAAGCAGACAAAC 58.880 43.478 0.00 0.00 0.00 2.93
588 591 4.400529 TGTAGAGACACAAGCAGACAAA 57.599 40.909 0.00 0.00 0.00 2.83
590 593 4.400529 TTTGTAGAGACACAAGCAGACA 57.599 40.909 0.00 0.00 39.46 3.41
591 594 4.090642 CGATTTGTAGAGACACAAGCAGAC 59.909 45.833 0.00 0.00 39.46 3.51
592 595 4.237724 CGATTTGTAGAGACACAAGCAGA 58.762 43.478 0.00 0.00 39.46 4.26
593 596 3.369147 CCGATTTGTAGAGACACAAGCAG 59.631 47.826 0.00 0.00 39.46 4.24
596 602 4.806247 GGATCCGATTTGTAGAGACACAAG 59.194 45.833 0.00 0.00 39.46 3.16
598 604 4.023980 AGGATCCGATTTGTAGAGACACA 58.976 43.478 5.98 0.00 34.48 3.72
603 609 5.521906 TCTGAAGGATCCGATTTGTAGAG 57.478 43.478 5.98 0.00 0.00 2.43
617 623 2.952978 GGAGAAGCGTAGATCTGAAGGA 59.047 50.000 5.18 0.00 0.00 3.36
619 625 3.303725 CGAGGAGAAGCGTAGATCTGAAG 60.304 52.174 5.18 0.00 0.00 3.02
623 629 2.215196 GACGAGGAGAAGCGTAGATCT 58.785 52.381 0.00 0.00 41.34 2.75
629 635 1.429825 CATCGACGAGGAGAAGCGT 59.570 57.895 2.79 0.00 44.33 5.07
631 637 1.590259 GCCATCGACGAGGAGAAGC 60.590 63.158 11.71 1.71 0.00 3.86
632 638 1.298713 CGCCATCGACGAGGAGAAG 60.299 63.158 11.71 0.00 38.10 2.85
638 644 0.457166 TAACAACCGCCATCGACGAG 60.457 55.000 3.01 0.00 38.10 4.18
641 647 3.120130 TCAAAATAACAACCGCCATCGAC 60.120 43.478 0.00 0.00 38.10 4.20
645 651 3.520569 GCATCAAAATAACAACCGCCAT 58.479 40.909 0.00 0.00 0.00 4.40
646 652 2.669670 CGCATCAAAATAACAACCGCCA 60.670 45.455 0.00 0.00 0.00 5.69
651 657 6.927933 AAACTAGCGCATCAAAATAACAAC 57.072 33.333 11.47 0.00 0.00 3.32
657 663 7.607991 AGGCTATATAAACTAGCGCATCAAAAT 59.392 33.333 11.47 0.00 42.04 1.82
660 666 6.037786 AGGCTATATAAACTAGCGCATCAA 57.962 37.500 11.47 0.00 42.04 2.57
663 669 6.070995 TGGTAAGGCTATATAAACTAGCGCAT 60.071 38.462 11.47 0.00 42.04 4.73
666 672 5.798934 CGTGGTAAGGCTATATAAACTAGCG 59.201 44.000 0.00 0.00 42.04 4.26
670 676 5.532406 TCGTCGTGGTAAGGCTATATAAACT 59.468 40.000 0.00 0.00 0.00 2.66
673 679 5.065914 AGTCGTCGTGGTAAGGCTATATAA 58.934 41.667 0.00 0.00 0.00 0.98
674 680 4.645535 AGTCGTCGTGGTAAGGCTATATA 58.354 43.478 0.00 0.00 0.00 0.86
675 681 3.484407 AGTCGTCGTGGTAAGGCTATAT 58.516 45.455 0.00 0.00 0.00 0.86
676 682 2.923121 AGTCGTCGTGGTAAGGCTATA 58.077 47.619 0.00 0.00 0.00 1.31
677 683 1.760192 AGTCGTCGTGGTAAGGCTAT 58.240 50.000 0.00 0.00 0.00 2.97
678 684 1.470098 GAAGTCGTCGTGGTAAGGCTA 59.530 52.381 0.00 0.00 0.00 3.93
679 685 0.243095 GAAGTCGTCGTGGTAAGGCT 59.757 55.000 0.00 0.00 0.00 4.58
681 687 1.538512 TGAGAAGTCGTCGTGGTAAGG 59.461 52.381 0.00 0.00 0.00 2.69
682 688 2.983402 TGAGAAGTCGTCGTGGTAAG 57.017 50.000 0.00 0.00 0.00 2.34
685 691 1.200252 CAGATGAGAAGTCGTCGTGGT 59.800 52.381 0.00 0.00 42.77 4.16
686 692 1.200252 ACAGATGAGAAGTCGTCGTGG 59.800 52.381 0.00 0.00 42.77 4.94
692 699 6.424176 TTGTAGTAGACAGATGAGAAGTCG 57.576 41.667 0.00 0.00 39.88 4.18
701 708 8.903820 GGGCAAATTTTATTGTAGTAGACAGAT 58.096 33.333 0.00 0.00 39.88 2.90
702 709 7.338449 GGGGCAAATTTTATTGTAGTAGACAGA 59.662 37.037 0.00 0.00 39.88 3.41
719 726 2.499693 CCTTATTGGAACGGGGCAAATT 59.500 45.455 0.00 0.00 38.35 1.82
720 727 2.107366 CCTTATTGGAACGGGGCAAAT 58.893 47.619 0.00 0.00 38.35 2.32
728 735 1.408266 CCACCCTCCCTTATTGGAACG 60.408 57.143 0.00 0.00 38.35 3.95
729 736 1.639108 ACCACCCTCCCTTATTGGAAC 59.361 52.381 0.00 0.00 38.35 3.62
730 737 1.638589 CACCACCCTCCCTTATTGGAA 59.361 52.381 0.00 0.00 38.35 3.53
734 741 0.909623 CGTCACCACCCTCCCTTATT 59.090 55.000 0.00 0.00 0.00 1.40
737 744 2.928396 CCGTCACCACCCTCCCTT 60.928 66.667 0.00 0.00 0.00 3.95
741 748 4.699522 GCCACCGTCACCACCCTC 62.700 72.222 0.00 0.00 0.00 4.30
761 768 1.153939 CACTCGAGCGACTGAAGGG 60.154 63.158 13.61 0.00 0.00 3.95
767 774 2.288458 GACTATAAGCACTCGAGCGACT 59.712 50.000 13.61 4.33 40.15 4.18
774 782 1.003759 AGCGACGACTATAAGCACTCG 60.004 52.381 0.00 0.00 0.00 4.18
775 783 2.759538 AGCGACGACTATAAGCACTC 57.240 50.000 0.00 0.00 0.00 3.51
777 785 3.874400 TCTAGCGACGACTATAAGCAC 57.126 47.619 0.00 0.00 0.00 4.40
783 791 3.128852 AGACCATCTAGCGACGACTAT 57.871 47.619 0.00 0.00 0.00 2.12
831 839 8.774586 GTGTCAAGATAGTACAAAGAACAACAT 58.225 33.333 0.00 0.00 0.00 2.71
834 842 7.441157 CAGGTGTCAAGATAGTACAAAGAACAA 59.559 37.037 0.00 0.00 0.00 2.83
843 851 6.458232 AGTCATCAGGTGTCAAGATAGTAC 57.542 41.667 0.00 0.00 0.00 2.73
849 857 7.718334 TCTATTTAGTCATCAGGTGTCAAGA 57.282 36.000 0.00 0.00 0.00 3.02
903 911 9.213799 GGCTACACATCCAAATTGATTTTTAAA 57.786 29.630 0.00 0.00 0.00 1.52
910 918 5.657745 TGAATGGCTACACATCCAAATTGAT 59.342 36.000 0.00 0.00 35.75 2.57
922 930 3.191162 TGCATTGAGTTGAATGGCTACAC 59.809 43.478 0.00 0.00 34.42 2.90
924 932 4.439305 TTGCATTGAGTTGAATGGCTAC 57.561 40.909 0.00 0.00 34.42 3.58
925 933 5.465532 TTTTGCATTGAGTTGAATGGCTA 57.534 34.783 0.00 0.00 34.42 3.93
926 934 4.339872 TTTTGCATTGAGTTGAATGGCT 57.660 36.364 0.00 0.00 34.42 4.75
927 935 5.049267 ACAATTTTGCATTGAGTTGAATGGC 60.049 36.000 5.55 0.00 34.42 4.40
928 936 6.425721 AGACAATTTTGCATTGAGTTGAATGG 59.574 34.615 5.55 0.00 34.42 3.16
930 938 7.439381 AGAGACAATTTTGCATTGAGTTGAAT 58.561 30.769 5.55 0.00 33.51 2.57
983 994 1.645034 CATTACTGACCACTCGCCTG 58.355 55.000 0.00 0.00 0.00 4.85
1023 1038 2.904866 TGCGGCAACTGGAACACC 60.905 61.111 0.00 0.00 0.00 4.16
1026 1041 2.639286 CTGTGCGGCAACTGGAAC 59.361 61.111 3.23 0.00 0.00 3.62
1152 1167 3.902162 GAGGTGCACGTACGCGGAA 62.902 63.158 16.72 0.00 43.45 4.30
1158 1173 1.079336 GAAGGGGAGGTGCACGTAC 60.079 63.158 13.51 13.51 0.00 3.67
1668 1683 2.204291 TGGTTGGGCAGGGAGGAT 60.204 61.111 0.00 0.00 0.00 3.24
1788 1803 7.578310 ATGGATAGAATGAACTCACATTTGG 57.422 36.000 0.00 0.00 40.03 3.28
1807 1823 7.546444 AGGGATCATAGCTCATAGATATGGAT 58.454 38.462 11.16 5.15 42.94 3.41
1814 1830 7.646884 TCAAGATAGGGATCATAGCTCATAGA 58.353 38.462 0.00 0.00 34.17 1.98
1999 2020 4.527944 CCCCTTTCCAATAAGAGAAGACC 58.472 47.826 0.00 0.00 0.00 3.85
2035 2056 4.157289 CGTAACCTCAGCTCTGTAACCTAA 59.843 45.833 0.00 0.00 0.00 2.69
2135 2162 0.041839 GCGCATGGTTTAGCTCGATG 60.042 55.000 0.30 0.00 0.00 3.84
2185 2212 4.141937 CCTGAATTCCCGAGTCACAGAATA 60.142 45.833 2.27 0.00 0.00 1.75
2214 2241 4.159135 GTGGCATTCAGGAGATTTGTCAAT 59.841 41.667 0.00 0.00 0.00 2.57
2215 2242 3.507233 GTGGCATTCAGGAGATTTGTCAA 59.493 43.478 0.00 0.00 0.00 3.18
2216 2243 3.084039 GTGGCATTCAGGAGATTTGTCA 58.916 45.455 0.00 0.00 0.00 3.58
2501 2529 8.437360 TGATGTCAGATGGTTTATGTCATTAC 57.563 34.615 0.00 0.00 0.00 1.89
2577 2605 2.093973 AGACCGCAAGAGTGTAATCCAG 60.094 50.000 0.00 0.00 43.02 3.86
2590 2618 0.753479 TGAAAAGGGCAAGACCGCAA 60.753 50.000 0.00 0.00 40.62 4.85
2592 2620 0.171231 GATGAAAAGGGCAAGACCGC 59.829 55.000 0.00 0.00 40.62 5.68
2593 2621 0.447801 CGATGAAAAGGGCAAGACCG 59.552 55.000 0.00 0.00 40.62 4.79
2594 2622 1.534729 ACGATGAAAAGGGCAAGACC 58.465 50.000 0.00 0.00 37.93 3.85
2596 2624 4.584874 TGAATACGATGAAAAGGGCAAGA 58.415 39.130 0.00 0.00 0.00 3.02
2623 2651 8.959548 ACACTTTGCAAGATATCAAACATGATA 58.040 29.630 5.32 1.38 35.53 2.15
2629 2657 6.681777 AGGAACACTTTGCAAGATATCAAAC 58.318 36.000 5.32 0.00 0.00 2.93
2664 2692 2.029828 TCAGAGCTTCGGTTCAGTTCTC 60.030 50.000 0.00 0.00 29.98 2.87
2688 2716 1.267806 CTTCGCAAACAGTGAGGCAAT 59.732 47.619 0.00 0.00 38.15 3.56
2702 2730 5.770162 TCTCTGGAGTGATATAATCTTCGCA 59.230 40.000 0.00 0.00 0.00 5.10
2714 2742 5.306678 ACTGAACTTCTTTCTCTGGAGTGAT 59.693 40.000 0.00 0.00 34.97 3.06
2718 2746 5.467035 AGACTGAACTTCTTTCTCTGGAG 57.533 43.478 0.00 0.00 34.97 3.86
2772 2801 7.354751 ACAAATCCAGTTAAGCCTTTTAACA 57.645 32.000 11.14 0.00 37.35 2.41
2834 2863 6.599638 AGAGAACAACATGGCTTTATAAGGTC 59.400 38.462 0.00 0.00 0.00 3.85
2983 3012 9.754382 ATAGCTGCAACATTTAATATGAAAAGG 57.246 29.630 1.02 0.00 0.00 3.11
3051 3080 6.861065 TTTGAAGCGATCTTGTAGAAGTTT 57.139 33.333 0.00 0.00 31.48 2.66
3066 3095 3.338818 TCAGAAAGCTGTTTTGAAGCG 57.661 42.857 0.00 0.00 45.59 4.68
3192 3221 0.106708 TGATGTAGCTTGCCGATCCC 59.893 55.000 0.00 0.00 0.00 3.85
3198 3227 0.447801 CACCGTTGATGTAGCTTGCC 59.552 55.000 0.00 0.00 0.00 4.52
3298 3327 1.666700 CTTCGTCTCGGAGACACTAGG 59.333 57.143 31.17 18.00 45.30 3.02
3303 3332 2.704464 TATCCTTCGTCTCGGAGACA 57.296 50.000 31.17 18.70 45.30 3.41
3399 3428 1.595993 ATGACCGTGTCAGACCCTCG 61.596 60.000 11.50 0.80 46.04 4.63
3454 3483 0.037447 TTGTCCATGGCGATCACCAA 59.963 50.000 6.54 0.00 44.65 3.67
3482 3511 0.609957 CTCATTGAACTGCAGGGCCA 60.610 55.000 19.93 9.69 0.00 5.36
3555 3596 1.050988 ATCCATCCGGGTCACTCAGG 61.051 60.000 0.00 0.00 38.11 3.86
3757 3961 6.423862 CCAGCTGAACAATTGAACAATTTTG 58.576 36.000 17.39 5.04 38.84 2.44
3772 3976 1.237285 ACGATTGGTGCCAGCTGAAC 61.237 55.000 17.39 13.04 0.00 3.18
3786 3990 2.551504 GGGGTCTGGTAAACACACGATT 60.552 50.000 0.00 0.00 0.00 3.34
3793 3998 1.282382 GGCTAGGGGTCTGGTAAACA 58.718 55.000 0.00 0.00 0.00 2.83
3812 4017 7.501515 GTTAAATTCAAATTCAGAAAGCACCG 58.498 34.615 0.00 0.00 0.00 4.94
3817 4022 6.090763 GCCCCGTTAAATTCAAATTCAGAAAG 59.909 38.462 0.00 0.00 0.00 2.62
3829 4034 0.099968 GAAGGCGCCCCGTTAAATTC 59.900 55.000 26.15 14.10 35.76 2.17
3852 4057 0.861837 GGTGCGAACTCAACTGACAG 59.138 55.000 0.00 0.00 0.00 3.51
3853 4058 0.464036 AGGTGCGAACTCAACTGACA 59.536 50.000 0.00 0.00 31.77 3.58
3882 4087 6.214399 GCCAGGATGTACTACACTACATTAC 58.786 44.000 0.00 0.00 37.45 1.89
3913 4118 2.324541 ACCAAGCCTTGCCAAAACATA 58.675 42.857 0.00 0.00 0.00 2.29
3935 4140 6.381481 ACGATTCATGTGCACATTATCAAT 57.619 33.333 31.38 24.89 33.61 2.57
3936 4141 5.816449 ACGATTCATGTGCACATTATCAA 57.184 34.783 31.38 22.53 33.61 2.57
3956 4161 0.668401 GACCCCGTGACCACTAAACG 60.668 60.000 0.00 0.00 37.07 3.60
3958 4163 0.682852 CAGACCCCGTGACCACTAAA 59.317 55.000 0.00 0.00 0.00 1.85
3972 4177 4.034510 CAGTTCAAGTTCAGTGTTCAGACC 59.965 45.833 0.00 0.00 0.00 3.85
3978 4183 2.684881 CCAGCAGTTCAAGTTCAGTGTT 59.315 45.455 0.00 0.00 0.00 3.32
3981 4186 2.565841 GACCAGCAGTTCAAGTTCAGT 58.434 47.619 0.00 0.00 0.00 3.41
3990 4195 1.620819 TCTCTTCAGGACCAGCAGTTC 59.379 52.381 0.00 0.00 0.00 3.01
3992 4197 1.722034 TTCTCTTCAGGACCAGCAGT 58.278 50.000 0.00 0.00 0.00 4.40
4018 4223 0.850100 TCCTTTCTGTTTGCCCTCCA 59.150 50.000 0.00 0.00 0.00 3.86
4051 4256 3.650950 TTGGTGCTGAGGCCCTCC 61.651 66.667 8.62 0.00 37.74 4.30
4070 4275 0.462937 AAGGCACAGCGTACACAACA 60.463 50.000 0.00 0.00 0.00 3.33
4072 4277 0.179070 TGAAGGCACAGCGTACACAA 60.179 50.000 0.00 0.00 0.00 3.33
4090 4295 2.099141 TTCATCGTTTCAGGCTCCTG 57.901 50.000 9.61 9.61 44.86 3.86
4100 4305 7.087409 TGCATTACAAGATGATTCATCGTTT 57.913 32.000 18.52 12.34 44.67 3.60
4116 4321 2.368439 GAGAATGGGCACTGCATTACA 58.632 47.619 2.82 0.00 0.00 2.41
4117 4322 1.678101 GGAGAATGGGCACTGCATTAC 59.322 52.381 2.82 0.00 0.00 1.89
4121 4326 1.001764 CTGGAGAATGGGCACTGCA 60.002 57.895 2.82 0.00 33.80 4.41
4128 4333 1.209019 CAGACAGTCCTGGAGAATGGG 59.791 57.143 0.00 0.00 44.94 4.00
4138 4343 1.349026 CACCAATGACCAGACAGTCCT 59.651 52.381 0.00 0.00 35.83 3.85
4154 4359 1.557099 ATTCAGAGCTACGGTCACCA 58.443 50.000 0.00 0.00 31.89 4.17
4158 4363 3.060602 GGCAATATTCAGAGCTACGGTC 58.939 50.000 0.00 0.00 0.00 4.79
4162 4367 4.006319 GGGATGGCAATATTCAGAGCTAC 58.994 47.826 0.00 0.00 0.00 3.58
4165 4370 1.808945 CGGGATGGCAATATTCAGAGC 59.191 52.381 0.00 0.00 0.00 4.09
4190 4395 7.132213 CACGAGAACTGAATTTTGCTAAAGAA 58.868 34.615 0.00 0.00 0.00 2.52
4193 4398 6.183360 ACACACGAGAACTGAATTTTGCTAAA 60.183 34.615 0.00 0.00 0.00 1.85
4194 4399 5.295787 ACACACGAGAACTGAATTTTGCTAA 59.704 36.000 0.00 0.00 0.00 3.09
4195 4400 4.814234 ACACACGAGAACTGAATTTTGCTA 59.186 37.500 0.00 0.00 0.00 3.49
4227 4432 1.230324 GATAATTGGCGAGCACCTCC 58.770 55.000 0.00 0.00 0.00 4.30
4235 4440 1.070786 GCCCTCGGATAATTGGCGA 59.929 57.895 0.00 0.00 31.55 5.54
4240 4445 3.080300 TGTGTTTGCCCTCGGATAATT 57.920 42.857 0.00 0.00 0.00 1.40
4241 4446 2.799126 TGTGTTTGCCCTCGGATAAT 57.201 45.000 0.00 0.00 0.00 1.28
4242 4447 2.570415 TTGTGTTTGCCCTCGGATAA 57.430 45.000 0.00 0.00 0.00 1.75
4243 4448 2.432444 CTTTGTGTTTGCCCTCGGATA 58.568 47.619 0.00 0.00 0.00 2.59
4244 4449 1.247567 CTTTGTGTTTGCCCTCGGAT 58.752 50.000 0.00 0.00 0.00 4.18
4245 4450 0.821711 CCTTTGTGTTTGCCCTCGGA 60.822 55.000 0.00 0.00 0.00 4.55
4246 4451 0.821711 TCCTTTGTGTTTGCCCTCGG 60.822 55.000 0.00 0.00 0.00 4.63
4247 4452 1.001378 CTTCCTTTGTGTTTGCCCTCG 60.001 52.381 0.00 0.00 0.00 4.63
4248 4453 1.269778 GCTTCCTTTGTGTTTGCCCTC 60.270 52.381 0.00 0.00 0.00 4.30
4249 4454 0.752658 GCTTCCTTTGTGTTTGCCCT 59.247 50.000 0.00 0.00 0.00 5.19
4250 4455 0.249868 GGCTTCCTTTGTGTTTGCCC 60.250 55.000 0.00 0.00 33.45 5.36
4251 4456 0.597377 CGGCTTCCTTTGTGTTTGCC 60.597 55.000 0.00 0.00 35.94 4.52
4252 4457 0.597377 CCGGCTTCCTTTGTGTTTGC 60.597 55.000 0.00 0.00 0.00 3.68
4253 4458 0.597377 GCCGGCTTCCTTTGTGTTTG 60.597 55.000 22.15 0.00 0.00 2.93
4254 4459 1.739667 GCCGGCTTCCTTTGTGTTT 59.260 52.632 22.15 0.00 0.00 2.83
4255 4460 2.551912 CGCCGGCTTCCTTTGTGTT 61.552 57.895 26.68 0.00 0.00 3.32
4256 4461 2.978010 CGCCGGCTTCCTTTGTGT 60.978 61.111 26.68 0.00 0.00 3.72
4257 4462 4.404654 GCGCCGGCTTCCTTTGTG 62.405 66.667 26.68 6.32 35.83 3.33
4270 4475 2.022129 CCGGAGTGATTATCGCGCC 61.022 63.158 16.70 16.70 42.34 6.53
4286 4491 4.607293 TTCCAGATGGAGAATATCACCG 57.393 45.455 1.13 0.00 46.36 4.94
4293 4498 4.629122 TCCTCTCTTTCCAGATGGAGAAT 58.371 43.478 1.13 0.00 46.36 2.40
4328 4533 2.029020 TCCGAGGTTGAGATGTTGTCAG 60.029 50.000 0.00 0.00 0.00 3.51
4329 4534 1.967779 TCCGAGGTTGAGATGTTGTCA 59.032 47.619 0.00 0.00 0.00 3.58
4332 4537 2.341257 CTGTCCGAGGTTGAGATGTTG 58.659 52.381 0.00 0.00 0.00 3.33
4335 4540 0.803768 CGCTGTCCGAGGTTGAGATG 60.804 60.000 0.00 0.00 40.02 2.90
4352 4557 1.418373 GATTTTGTTTGCCACCTCGC 58.582 50.000 0.00 0.00 0.00 5.03
4376 4581 3.670625 TGTTTTAGGAATGGTCACTCCG 58.329 45.455 0.00 0.00 39.52 4.63
4377 4582 6.350194 GGATTTGTTTTAGGAATGGTCACTCC 60.350 42.308 0.00 0.00 0.00 3.85
4378 4583 6.434340 AGGATTTGTTTTAGGAATGGTCACTC 59.566 38.462 0.00 0.00 0.00 3.51
4379 4584 6.314917 AGGATTTGTTTTAGGAATGGTCACT 58.685 36.000 0.00 0.00 0.00 3.41
4380 4585 6.590234 AGGATTTGTTTTAGGAATGGTCAC 57.410 37.500 0.00 0.00 0.00 3.67
4381 4586 6.553100 ACAAGGATTTGTTTTAGGAATGGTCA 59.447 34.615 0.00 0.00 45.01 4.02
4382 4587 6.868339 CACAAGGATTTGTTTTAGGAATGGTC 59.132 38.462 0.00 0.00 45.01 4.02
4383 4588 6.239572 CCACAAGGATTTGTTTTAGGAATGGT 60.240 38.462 0.00 0.00 45.01 3.55
4384 4589 6.014669 TCCACAAGGATTTGTTTTAGGAATGG 60.015 38.462 0.00 0.00 45.01 3.16
4385 4590 6.991938 TCCACAAGGATTTGTTTTAGGAATG 58.008 36.000 0.00 0.00 45.01 2.67
4386 4591 6.782494 ACTCCACAAGGATTTGTTTTAGGAAT 59.218 34.615 0.00 0.00 45.01 3.01
4387 4592 6.040391 CACTCCACAAGGATTTGTTTTAGGAA 59.960 38.462 0.00 0.00 45.01 3.36
4388 4593 5.534654 CACTCCACAAGGATTTGTTTTAGGA 59.465 40.000 0.00 0.00 45.01 2.94
4389 4594 5.278957 CCACTCCACAAGGATTTGTTTTAGG 60.279 44.000 0.00 0.00 45.01 2.69
4390 4595 5.534654 TCCACTCCACAAGGATTTGTTTTAG 59.465 40.000 0.00 0.00 45.01 1.85
4391 4596 5.450453 TCCACTCCACAAGGATTTGTTTTA 58.550 37.500 0.00 0.00 45.01 1.52
4392 4597 4.285863 TCCACTCCACAAGGATTTGTTTT 58.714 39.130 0.00 0.00 45.01 2.43
4393 4598 3.891366 CTCCACTCCACAAGGATTTGTTT 59.109 43.478 0.00 0.00 45.01 2.83
4394 4599 3.490348 CTCCACTCCACAAGGATTTGTT 58.510 45.455 0.00 0.00 45.01 2.83
4396 4601 2.440409 CCTCCACTCCACAAGGATTTG 58.560 52.381 0.00 0.00 44.70 2.32
4397 4602 1.272147 GCCTCCACTCCACAAGGATTT 60.272 52.381 0.00 0.00 44.70 2.17
4398 4603 0.329596 GCCTCCACTCCACAAGGATT 59.670 55.000 0.00 0.00 44.70 3.01
4399 4604 0.548682 AGCCTCCACTCCACAAGGAT 60.549 55.000 0.00 0.00 44.70 3.24
4400 4605 0.116342 TAGCCTCCACTCCACAAGGA 59.884 55.000 0.00 0.00 43.21 3.36
4401 4606 1.134280 CATAGCCTCCACTCCACAAGG 60.134 57.143 0.00 0.00 0.00 3.61
4402 4607 1.134280 CCATAGCCTCCACTCCACAAG 60.134 57.143 0.00 0.00 0.00 3.16
4403 4608 0.911769 CCATAGCCTCCACTCCACAA 59.088 55.000 0.00 0.00 0.00 3.33
4404 4609 0.042581 TCCATAGCCTCCACTCCACA 59.957 55.000 0.00 0.00 0.00 4.17
4405 4610 1.204146 TTCCATAGCCTCCACTCCAC 58.796 55.000 0.00 0.00 0.00 4.02
4413 4618 3.471680 CCAAGCTAGTTTCCATAGCCTC 58.528 50.000 1.52 0.00 45.53 4.70
4439 4644 4.116328 TCGCACCGCTCCTCTTCG 62.116 66.667 0.00 0.00 0.00 3.79
4449 4654 2.720758 CGCTCTTGTTCTCGCACCG 61.721 63.158 0.00 0.00 0.00 4.94
4454 4670 1.661112 GGGATTTCGCTCTTGTTCTCG 59.339 52.381 0.00 0.00 0.00 4.04
4466 4682 2.290323 CCCCAAGCCTATAGGGATTTCG 60.290 54.545 20.58 0.00 41.47 3.46
4467 4683 2.716969 ACCCCAAGCCTATAGGGATTTC 59.283 50.000 20.58 3.10 41.47 2.17
4469 4685 2.065799 CACCCCAAGCCTATAGGGATT 58.934 52.381 20.58 3.58 45.65 3.01
4471 4687 0.401395 CCACCCCAAGCCTATAGGGA 60.401 60.000 20.58 0.00 45.80 4.20
4472 4688 0.401395 TCCACCCCAAGCCTATAGGG 60.401 60.000 20.58 5.93 45.75 3.53
4473 4689 1.352352 CATCCACCCCAAGCCTATAGG 59.648 57.143 15.01 15.01 38.53 2.57
4474 4690 2.057922 ACATCCACCCCAAGCCTATAG 58.942 52.381 0.00 0.00 0.00 1.31
4503 4722 5.171339 TGATGCTAAAGAAGAAAGGCTCT 57.829 39.130 0.00 0.00 35.13 4.09
4507 4726 6.541641 AGCTACATGATGCTAAAGAAGAAAGG 59.458 38.462 13.68 0.00 37.81 3.11
4543 4762 5.233957 TGCGTGTGGATTCATTAAGATTG 57.766 39.130 0.00 0.00 0.00 2.67
4544 4763 5.895636 TTGCGTGTGGATTCATTAAGATT 57.104 34.783 0.00 0.00 0.00 2.40
4545 4764 5.677091 GCTTTGCGTGTGGATTCATTAAGAT 60.677 40.000 0.00 0.00 0.00 2.40
4549 4768 3.081061 AGCTTTGCGTGTGGATTCATTA 58.919 40.909 0.00 0.00 0.00 1.90
4554 4783 1.267806 CAAGAGCTTTGCGTGTGGATT 59.732 47.619 0.00 0.00 0.00 3.01
4558 4787 4.216963 GCAAGAGCTTTGCGTGTG 57.783 55.556 14.80 0.00 37.91 3.82
4599 4828 1.975407 GGCACCTGACTGCAGCAAT 60.975 57.895 15.27 0.00 40.91 3.56
4600 4829 2.595463 GGCACCTGACTGCAGCAA 60.595 61.111 15.27 0.39 40.91 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.