Multiple sequence alignment - TraesCS1A01G350400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G350400 chr1A 100.000 3605 0 0 1 3605 535311092 535314696 0.000000e+00 6658
1 TraesCS1A01G350400 chr1B 90.832 1178 75 18 1497 2653 595177135 595178300 0.000000e+00 1546
2 TraesCS1A01G350400 chr1B 90.000 1040 61 19 247 1268 595176083 595177097 0.000000e+00 1304
3 TraesCS1A01G350400 chr1B 89.974 389 19 8 3224 3596 595180174 595180558 5.410000e-133 484
4 TraesCS1A01G350400 chr1B 82.463 268 33 8 2959 3224 595178471 595178726 4.680000e-54 222
5 TraesCS1A01G350400 chr1B 88.073 109 12 1 1354 1462 6260844 6260737 1.050000e-25 128
6 TraesCS1A01G350400 chr1D 89.443 1184 71 22 1497 2653 439022568 439023724 0.000000e+00 1445
7 TraesCS1A01G350400 chr1D 90.373 1018 57 16 255 1268 439021505 439022485 0.000000e+00 1299
8 TraesCS1A01G350400 chr1D 92.185 627 28 12 2981 3596 439023884 439024500 0.000000e+00 867
9 TraesCS1A01G350400 chr1D 90.496 242 22 1 1 242 242545659 242545899 5.810000e-83 318
10 TraesCS1A01G350400 chr1D 87.429 175 6 8 2757 2929 439023723 439023883 1.710000e-43 187
11 TraesCS1A01G350400 chr7D 86.122 245 29 5 1 242 126348987 126349229 3.570000e-65 259
12 TraesCS1A01G350400 chr3D 85.306 245 31 5 1 242 583965054 583965296 7.730000e-62 248
13 TraesCS1A01G350400 chr3D 85.714 231 28 5 15 242 603000 602772 4.650000e-59 239
14 TraesCS1A01G350400 chr5B 97.345 113 3 0 2650 2762 380324246 380324358 3.670000e-45 193
15 TraesCS1A01G350400 chr5B 97.222 108 3 0 2652 2759 598082858 598082965 2.210000e-42 183
16 TraesCS1A01G350400 chr5B 83.333 192 30 2 1062 1252 704878544 704878734 3.700000e-40 176
17 TraesCS1A01G350400 chr5B 89.908 109 9 2 1354 1462 472739778 472739672 4.850000e-29 139
18 TraesCS1A01G350400 chr4A 84.375 192 28 2 1062 1252 610490450 610490260 1.710000e-43 187
19 TraesCS1A01G350400 chr4A 96.330 109 4 0 2652 2760 468214147 468214039 2.860000e-41 180
20 TraesCS1A01G350400 chr4A 96.296 108 4 0 2652 2759 176868199 176868306 1.030000e-40 178
21 TraesCS1A01G350400 chr4A 95.413 109 5 0 2652 2760 586668024 586667916 1.330000e-39 174
22 TraesCS1A01G350400 chr3A 96.491 114 3 1 2650 2762 32195743 32195630 1.710000e-43 187
23 TraesCS1A01G350400 chr6D 84.536 194 23 7 1063 1251 48719556 48719747 6.150000e-43 185
24 TraesCS1A01G350400 chr6D 88.073 109 12 1 1354 1462 467802378 467802271 1.050000e-25 128
25 TraesCS1A01G350400 chr6B 96.396 111 3 1 2652 2761 447114662 447114552 7.950000e-42 182
26 TraesCS1A01G350400 chr6B 82.990 194 26 7 1063 1251 122682745 122682554 6.190000e-38 169
27 TraesCS1A01G350400 chr3B 96.296 108 4 0 2651 2758 86092799 86092692 1.030000e-40 178
28 TraesCS1A01G350400 chr3B 82.383 193 30 4 1061 1251 524325528 524325718 8.010000e-37 165
29 TraesCS1A01G350400 chr6A 96.262 107 4 0 2652 2758 52322113 52322219 3.700000e-40 176
30 TraesCS1A01G350400 chr5D 83.077 195 31 2 1062 1255 558247759 558247566 3.700000e-40 176
31 TraesCS1A01G350400 chr5D 88.991 109 10 2 1354 1462 391977304 391977198 2.260000e-27 134
32 TraesCS1A01G350400 chr5A 82.812 192 27 6 1063 1251 525079249 525079061 2.230000e-37 167
33 TraesCS1A01G350400 chr5A 91.589 107 7 2 1356 1462 361907190 361907294 2.900000e-31 147
34 TraesCS1A01G350400 chr5A 88.288 111 12 1 1354 1464 414776120 414776011 8.120000e-27 132
35 TraesCS1A01G350400 chrUn 89.474 114 9 3 1344 1456 396163772 396163883 1.350000e-29 141
36 TraesCS1A01G350400 chr2A 85.938 128 12 6 1344 1468 694957085 694956961 8.120000e-27 132
37 TraesCS1A01G350400 chr7A 88.182 110 12 1 1354 1463 138955756 138955864 2.920000e-26 130


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G350400 chr1A 535311092 535314696 3604 False 6658.0 6658 100.00000 1 3605 1 chr1A.!!$F1 3604
1 TraesCS1A01G350400 chr1B 595176083 595180558 4475 False 889.0 1546 88.31725 247 3596 4 chr1B.!!$F1 3349
2 TraesCS1A01G350400 chr1D 439021505 439024500 2995 False 949.5 1445 89.85750 255 3596 4 chr1D.!!$F2 3341

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
92 93 0.036732 TGCTCAGGTTTTCGCCTCAT 59.963 50.0 0.0 0.0 36.58 2.9 F
1278 1302 0.036010 CCACTCCATCGCTTCAACCT 60.036 55.0 0.0 0.0 0.00 3.5 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1511 1535 0.179108 CCGGAAACCCTGAGACGATC 60.179 60.0 0.00 0.00 0.0 3.69 R
3089 3176 0.037447 AGTCAGAAAAGGAGGCTGCC 59.963 55.0 11.65 11.65 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.916983 TGGACTTGTTGGAATCAGTTTG 57.083 40.909 0.00 0.00 0.00 2.93
22 23 3.636300 TGGACTTGTTGGAATCAGTTTGG 59.364 43.478 0.00 0.00 0.00 3.28
23 24 3.552890 GGACTTGTTGGAATCAGTTTGGC 60.553 47.826 0.00 0.00 0.00 4.52
24 25 2.365293 ACTTGTTGGAATCAGTTTGGCC 59.635 45.455 0.00 0.00 0.00 5.36
25 26 1.337118 TGTTGGAATCAGTTTGGCCC 58.663 50.000 0.00 0.00 0.00 5.80
26 27 0.608130 GTTGGAATCAGTTTGGCCCC 59.392 55.000 0.00 0.00 0.00 5.80
27 28 0.897863 TTGGAATCAGTTTGGCCCCG 60.898 55.000 0.00 0.00 0.00 5.73
28 29 1.001393 GGAATCAGTTTGGCCCCGA 60.001 57.895 0.00 0.00 0.00 5.14
29 30 1.032114 GGAATCAGTTTGGCCCCGAG 61.032 60.000 0.00 0.00 0.00 4.63
30 31 0.322546 GAATCAGTTTGGCCCCGAGT 60.323 55.000 0.00 0.00 0.00 4.18
31 32 0.609131 AATCAGTTTGGCCCCGAGTG 60.609 55.000 0.00 0.00 0.00 3.51
32 33 2.484287 ATCAGTTTGGCCCCGAGTGG 62.484 60.000 0.00 0.00 0.00 4.00
43 44 4.979204 CGAGTGGCGGTTCTGTAA 57.021 55.556 0.00 0.00 36.03 2.41
44 45 3.436001 CGAGTGGCGGTTCTGTAAT 57.564 52.632 0.00 0.00 36.03 1.89
45 46 2.572191 CGAGTGGCGGTTCTGTAATA 57.428 50.000 0.00 0.00 36.03 0.98
46 47 2.460918 CGAGTGGCGGTTCTGTAATAG 58.539 52.381 0.00 0.00 36.03 1.73
47 48 2.098607 CGAGTGGCGGTTCTGTAATAGA 59.901 50.000 0.00 0.00 36.03 1.98
48 49 3.243434 CGAGTGGCGGTTCTGTAATAGAT 60.243 47.826 0.00 0.00 33.77 1.98
49 50 4.023450 CGAGTGGCGGTTCTGTAATAGATA 60.023 45.833 0.00 0.00 33.77 1.98
50 51 5.455056 AGTGGCGGTTCTGTAATAGATAG 57.545 43.478 0.00 0.00 34.80 2.08
51 52 4.894114 AGTGGCGGTTCTGTAATAGATAGT 59.106 41.667 0.00 0.00 34.80 2.12
52 53 5.363005 AGTGGCGGTTCTGTAATAGATAGTT 59.637 40.000 0.00 0.00 34.80 2.24
53 54 6.548622 AGTGGCGGTTCTGTAATAGATAGTTA 59.451 38.462 0.00 0.00 34.80 2.24
54 55 6.862090 GTGGCGGTTCTGTAATAGATAGTTAG 59.138 42.308 0.00 0.00 34.80 2.34
55 56 6.774170 TGGCGGTTCTGTAATAGATAGTTAGA 59.226 38.462 0.00 0.00 34.80 2.10
56 57 7.083230 GGCGGTTCTGTAATAGATAGTTAGAC 58.917 42.308 0.00 0.00 34.80 2.59
57 58 7.083230 GCGGTTCTGTAATAGATAGTTAGACC 58.917 42.308 0.00 0.00 34.80 3.85
58 59 7.040548 GCGGTTCTGTAATAGATAGTTAGACCT 60.041 40.741 0.00 0.00 34.80 3.85
59 60 8.848182 CGGTTCTGTAATAGATAGTTAGACCTT 58.152 37.037 0.00 0.00 34.80 3.50
72 73 9.937175 GATAGTTAGACCTTTCAATATTTGTGC 57.063 33.333 0.00 0.00 0.00 4.57
73 74 9.686683 ATAGTTAGACCTTTCAATATTTGTGCT 57.313 29.630 0.00 0.00 0.00 4.40
74 75 7.820648 AGTTAGACCTTTCAATATTTGTGCTG 58.179 34.615 0.00 0.00 0.00 4.41
75 76 5.064441 AGACCTTTCAATATTTGTGCTGC 57.936 39.130 0.00 0.00 0.00 5.25
76 77 4.768968 AGACCTTTCAATATTTGTGCTGCT 59.231 37.500 0.00 0.00 0.00 4.24
77 78 5.064441 ACCTTTCAATATTTGTGCTGCTC 57.936 39.130 0.00 0.00 0.00 4.26
78 79 4.523943 ACCTTTCAATATTTGTGCTGCTCA 59.476 37.500 0.00 0.00 0.00 4.26
79 80 5.100259 CCTTTCAATATTTGTGCTGCTCAG 58.900 41.667 4.48 0.00 0.00 3.35
80 81 4.707030 TTCAATATTTGTGCTGCTCAGG 57.293 40.909 4.48 0.00 0.00 3.86
81 82 3.689347 TCAATATTTGTGCTGCTCAGGT 58.311 40.909 4.48 1.13 0.00 4.00
82 83 4.081406 TCAATATTTGTGCTGCTCAGGTT 58.919 39.130 4.48 0.00 0.00 3.50
83 84 4.523943 TCAATATTTGTGCTGCTCAGGTTT 59.476 37.500 4.48 0.00 0.00 3.27
84 85 5.010922 TCAATATTTGTGCTGCTCAGGTTTT 59.989 36.000 4.48 0.00 0.00 2.43
85 86 2.869233 TTTGTGCTGCTCAGGTTTTC 57.131 45.000 4.48 0.00 0.00 2.29
86 87 0.662619 TTGTGCTGCTCAGGTTTTCG 59.337 50.000 4.48 0.00 0.00 3.46
87 88 1.081840 GTGCTGCTCAGGTTTTCGC 60.082 57.895 0.00 0.00 0.00 4.70
88 89 2.260869 TGCTGCTCAGGTTTTCGCC 61.261 57.895 0.00 0.00 0.00 5.54
89 90 1.968540 GCTGCTCAGGTTTTCGCCT 60.969 57.895 0.00 0.00 39.99 5.52
90 91 1.916697 GCTGCTCAGGTTTTCGCCTC 61.917 60.000 0.00 0.00 36.58 4.70
91 92 0.603707 CTGCTCAGGTTTTCGCCTCA 60.604 55.000 0.00 0.00 36.58 3.86
92 93 0.036732 TGCTCAGGTTTTCGCCTCAT 59.963 50.000 0.00 0.00 36.58 2.90
93 94 0.449388 GCTCAGGTTTTCGCCTCATG 59.551 55.000 0.00 0.00 36.58 3.07
94 95 1.089920 CTCAGGTTTTCGCCTCATGG 58.910 55.000 0.00 0.00 36.58 3.66
111 112 6.549061 CCTCATGGCATTTATCATAATGTCG 58.451 40.000 0.00 0.00 41.79 4.35
112 113 6.403964 CCTCATGGCATTTATCATAATGTCGG 60.404 42.308 0.00 0.00 41.79 4.79
113 114 6.003326 TCATGGCATTTATCATAATGTCGGT 58.997 36.000 0.00 0.00 41.79 4.69
114 115 5.940192 TGGCATTTATCATAATGTCGGTC 57.060 39.130 0.00 0.00 41.79 4.79
115 116 5.372373 TGGCATTTATCATAATGTCGGTCA 58.628 37.500 0.00 0.00 41.79 4.02
116 117 5.825151 TGGCATTTATCATAATGTCGGTCAA 59.175 36.000 0.00 0.00 41.79 3.18
117 118 6.319911 TGGCATTTATCATAATGTCGGTCAAA 59.680 34.615 0.00 0.00 41.79 2.69
118 119 7.014134 TGGCATTTATCATAATGTCGGTCAAAT 59.986 33.333 0.00 0.00 41.79 2.32
119 120 7.326789 GGCATTTATCATAATGTCGGTCAAATG 59.673 37.037 0.00 0.00 37.72 2.32
120 121 7.862372 GCATTTATCATAATGTCGGTCAAATGT 59.138 33.333 0.00 0.00 37.72 2.71
121 122 9.172820 CATTTATCATAATGTCGGTCAAATGTG 57.827 33.333 0.00 0.00 32.17 3.21
122 123 5.756195 ATCATAATGTCGGTCAAATGTGG 57.244 39.130 0.00 0.00 0.00 4.17
123 124 4.584874 TCATAATGTCGGTCAAATGTGGT 58.415 39.130 0.00 0.00 0.00 4.16
124 125 4.394610 TCATAATGTCGGTCAAATGTGGTG 59.605 41.667 0.00 0.00 0.00 4.17
125 126 2.559698 ATGTCGGTCAAATGTGGTGA 57.440 45.000 0.00 0.00 0.00 4.02
126 127 2.333688 TGTCGGTCAAATGTGGTGAA 57.666 45.000 0.00 0.00 0.00 3.18
127 128 2.857483 TGTCGGTCAAATGTGGTGAAT 58.143 42.857 0.00 0.00 0.00 2.57
128 129 3.218453 TGTCGGTCAAATGTGGTGAATT 58.782 40.909 0.00 0.00 0.00 2.17
129 130 3.634448 TGTCGGTCAAATGTGGTGAATTT 59.366 39.130 0.00 0.00 0.00 1.82
130 131 4.098654 TGTCGGTCAAATGTGGTGAATTTT 59.901 37.500 0.00 0.00 0.00 1.82
131 132 4.679654 GTCGGTCAAATGTGGTGAATTTTC 59.320 41.667 0.00 0.00 0.00 2.29
132 133 4.582656 TCGGTCAAATGTGGTGAATTTTCT 59.417 37.500 0.00 0.00 0.00 2.52
133 134 4.681025 CGGTCAAATGTGGTGAATTTTCTG 59.319 41.667 0.00 0.00 0.00 3.02
134 135 5.507149 CGGTCAAATGTGGTGAATTTTCTGA 60.507 40.000 0.00 0.00 0.00 3.27
135 136 5.691754 GGTCAAATGTGGTGAATTTTCTGAC 59.308 40.000 0.00 0.00 0.00 3.51
136 137 5.399301 GTCAAATGTGGTGAATTTTCTGACG 59.601 40.000 0.00 0.00 0.00 4.35
137 138 4.503741 AATGTGGTGAATTTTCTGACGG 57.496 40.909 0.00 0.00 0.00 4.79
138 139 2.925724 TGTGGTGAATTTTCTGACGGT 58.074 42.857 0.00 0.00 0.00 4.83
139 140 2.616376 TGTGGTGAATTTTCTGACGGTG 59.384 45.455 0.00 0.00 0.00 4.94
140 141 1.606668 TGGTGAATTTTCTGACGGTGC 59.393 47.619 0.00 0.00 0.00 5.01
141 142 1.399727 GGTGAATTTTCTGACGGTGCG 60.400 52.381 0.00 0.00 0.00 5.34
142 143 1.263217 GTGAATTTTCTGACGGTGCGT 59.737 47.619 0.00 0.00 45.10 5.24
143 144 1.262950 TGAATTTTCTGACGGTGCGTG 59.737 47.619 0.00 0.00 41.37 5.34
144 145 1.529438 GAATTTTCTGACGGTGCGTGA 59.471 47.619 0.00 0.00 41.37 4.35
145 146 1.588674 ATTTTCTGACGGTGCGTGAA 58.411 45.000 0.00 0.00 41.37 3.18
146 147 0.653636 TTTTCTGACGGTGCGTGAAC 59.346 50.000 0.00 0.00 41.37 3.18
147 148 0.179094 TTTCTGACGGTGCGTGAACT 60.179 50.000 0.00 0.00 41.37 3.01
148 149 0.596600 TTCTGACGGTGCGTGAACTC 60.597 55.000 0.00 0.00 41.37 3.01
149 150 2.354188 TGACGGTGCGTGAACTCG 60.354 61.111 0.00 0.00 41.37 4.18
159 160 1.784525 CGTGAACTCGCTTTTCTCCT 58.215 50.000 0.00 0.00 0.00 3.69
160 161 2.135933 CGTGAACTCGCTTTTCTCCTT 58.864 47.619 0.00 0.00 0.00 3.36
161 162 2.544267 CGTGAACTCGCTTTTCTCCTTT 59.456 45.455 0.00 0.00 0.00 3.11
162 163 3.363084 CGTGAACTCGCTTTTCTCCTTTC 60.363 47.826 0.00 0.00 0.00 2.62
163 164 3.058846 GTGAACTCGCTTTTCTCCTTTCC 60.059 47.826 0.00 0.00 0.00 3.13
164 165 2.186532 ACTCGCTTTTCTCCTTTCCC 57.813 50.000 0.00 0.00 0.00 3.97
165 166 1.700186 ACTCGCTTTTCTCCTTTCCCT 59.300 47.619 0.00 0.00 0.00 4.20
166 167 2.289756 ACTCGCTTTTCTCCTTTCCCTC 60.290 50.000 0.00 0.00 0.00 4.30
167 168 1.003233 TCGCTTTTCTCCTTTCCCTCC 59.997 52.381 0.00 0.00 0.00 4.30
168 169 1.003696 CGCTTTTCTCCTTTCCCTCCT 59.996 52.381 0.00 0.00 0.00 3.69
169 170 2.717390 GCTTTTCTCCTTTCCCTCCTC 58.283 52.381 0.00 0.00 0.00 3.71
170 171 2.619332 GCTTTTCTCCTTTCCCTCCTCC 60.619 54.545 0.00 0.00 0.00 4.30
171 172 2.743131 TTTCTCCTTTCCCTCCTCCT 57.257 50.000 0.00 0.00 0.00 3.69
172 173 2.743131 TTCTCCTTTCCCTCCTCCTT 57.257 50.000 0.00 0.00 0.00 3.36
173 174 1.958288 TCTCCTTTCCCTCCTCCTTG 58.042 55.000 0.00 0.00 0.00 3.61
174 175 1.437149 TCTCCTTTCCCTCCTCCTTGA 59.563 52.381 0.00 0.00 0.00 3.02
175 176 2.158004 TCTCCTTTCCCTCCTCCTTGAA 60.158 50.000 0.00 0.00 0.00 2.69
176 177 1.985895 TCCTTTCCCTCCTCCTTGAAC 59.014 52.381 0.00 0.00 0.00 3.18
177 178 1.988846 CCTTTCCCTCCTCCTTGAACT 59.011 52.381 0.00 0.00 0.00 3.01
178 179 2.376855 CCTTTCCCTCCTCCTTGAACTT 59.623 50.000 0.00 0.00 0.00 2.66
179 180 3.416156 CTTTCCCTCCTCCTTGAACTTG 58.584 50.000 0.00 0.00 0.00 3.16
180 181 2.118403 TCCCTCCTCCTTGAACTTGT 57.882 50.000 0.00 0.00 0.00 3.16
181 182 2.418669 TCCCTCCTCCTTGAACTTGTT 58.581 47.619 0.00 0.00 0.00 2.83
182 183 2.783510 TCCCTCCTCCTTGAACTTGTTT 59.216 45.455 0.00 0.00 0.00 2.83
183 184 3.149981 CCCTCCTCCTTGAACTTGTTTC 58.850 50.000 0.00 0.00 34.41 2.78
184 185 3.181439 CCCTCCTCCTTGAACTTGTTTCT 60.181 47.826 0.00 0.00 34.97 2.52
185 186 3.817647 CCTCCTCCTTGAACTTGTTTCTG 59.182 47.826 0.00 0.00 34.97 3.02
186 187 3.817647 CTCCTCCTTGAACTTGTTTCTGG 59.182 47.826 0.00 0.00 34.97 3.86
187 188 3.458118 TCCTCCTTGAACTTGTTTCTGGA 59.542 43.478 0.00 0.00 36.65 3.86
188 189 4.080015 TCCTCCTTGAACTTGTTTCTGGAA 60.080 41.667 0.00 0.00 37.22 3.53
189 190 4.036852 CCTCCTTGAACTTGTTTCTGGAAC 59.963 45.833 0.00 0.00 37.22 3.62
190 191 4.855340 TCCTTGAACTTGTTTCTGGAACT 58.145 39.130 0.00 0.00 39.08 3.01
191 192 4.640201 TCCTTGAACTTGTTTCTGGAACTG 59.360 41.667 0.00 0.00 39.08 3.16
192 193 4.399303 CCTTGAACTTGTTTCTGGAACTGT 59.601 41.667 0.00 0.00 39.08 3.55
193 194 5.105756 CCTTGAACTTGTTTCTGGAACTGTT 60.106 40.000 9.39 9.39 39.08 3.16
194 195 5.309323 TGAACTTGTTTCTGGAACTGTTG 57.691 39.130 12.84 0.00 39.08 3.33
195 196 4.764823 TGAACTTGTTTCTGGAACTGTTGT 59.235 37.500 12.84 0.24 39.08 3.32
196 197 5.941058 TGAACTTGTTTCTGGAACTGTTGTA 59.059 36.000 12.84 3.31 39.08 2.41
197 198 6.601613 TGAACTTGTTTCTGGAACTGTTGTAT 59.398 34.615 12.84 0.00 39.08 2.29
198 199 7.122055 TGAACTTGTTTCTGGAACTGTTGTATT 59.878 33.333 12.84 0.00 39.08 1.89
199 200 7.404671 ACTTGTTTCTGGAACTGTTGTATTT 57.595 32.000 0.00 0.00 39.08 1.40
200 201 7.480810 ACTTGTTTCTGGAACTGTTGTATTTC 58.519 34.615 0.00 0.00 39.08 2.17
201 202 6.385649 TGTTTCTGGAACTGTTGTATTTCC 57.614 37.500 0.00 0.00 38.31 3.13
202 203 5.008217 TGTTTCTGGAACTGTTGTATTTCCG 59.992 40.000 0.00 0.00 40.13 4.30
203 204 4.345859 TCTGGAACTGTTGTATTTCCGT 57.654 40.909 0.00 0.00 40.13 4.69
204 205 4.312443 TCTGGAACTGTTGTATTTCCGTC 58.688 43.478 0.00 0.00 40.13 4.79
205 206 3.404899 TGGAACTGTTGTATTTCCGTCC 58.595 45.455 0.00 0.00 40.13 4.79
206 207 3.181453 TGGAACTGTTGTATTTCCGTCCA 60.181 43.478 0.00 0.00 40.13 4.02
207 208 4.007659 GGAACTGTTGTATTTCCGTCCAT 58.992 43.478 0.00 0.00 29.71 3.41
208 209 4.457949 GGAACTGTTGTATTTCCGTCCATT 59.542 41.667 0.00 0.00 29.71 3.16
209 210 5.371115 AACTGTTGTATTTCCGTCCATTG 57.629 39.130 0.00 0.00 0.00 2.82
210 211 3.190535 ACTGTTGTATTTCCGTCCATTGC 59.809 43.478 0.00 0.00 0.00 3.56
211 212 3.149981 TGTTGTATTTCCGTCCATTGCA 58.850 40.909 0.00 0.00 0.00 4.08
212 213 3.570125 TGTTGTATTTCCGTCCATTGCAA 59.430 39.130 0.00 0.00 0.00 4.08
213 214 4.219507 TGTTGTATTTCCGTCCATTGCAAT 59.780 37.500 5.99 5.99 0.00 3.56
214 215 4.368874 TGTATTTCCGTCCATTGCAATG 57.631 40.909 28.91 28.91 36.17 2.82
226 227 4.550076 CATTGCAATGGAAAGGGGTTAA 57.450 40.909 28.34 0.00 32.78 2.01
227 228 5.101648 CATTGCAATGGAAAGGGGTTAAT 57.898 39.130 28.34 0.00 32.78 1.40
228 229 4.550076 TTGCAATGGAAAGGGGTTAATG 57.450 40.909 0.00 0.00 0.00 1.90
229 230 2.235898 TGCAATGGAAAGGGGTTAATGC 59.764 45.455 0.00 0.00 0.00 3.56
230 231 2.419990 GCAATGGAAAGGGGTTAATGCC 60.420 50.000 0.00 0.00 0.00 4.40
237 238 4.747218 GGGTTAATGCCCGGTTCA 57.253 55.556 0.00 0.00 39.17 3.18
238 239 2.964343 GGGTTAATGCCCGGTTCAA 58.036 52.632 0.00 0.00 39.17 2.69
239 240 1.258676 GGGTTAATGCCCGGTTCAAA 58.741 50.000 0.00 0.00 39.17 2.69
240 241 1.619332 GGGTTAATGCCCGGTTCAAAA 59.381 47.619 0.00 0.00 39.17 2.44
241 242 2.037381 GGGTTAATGCCCGGTTCAAAAA 59.963 45.455 0.00 0.00 39.17 1.94
242 243 3.322369 GGTTAATGCCCGGTTCAAAAAG 58.678 45.455 0.00 0.00 0.00 2.27
243 244 2.734276 TAATGCCCGGTTCAAAAAGC 57.266 45.000 0.00 0.00 0.00 3.51
244 245 1.047801 AATGCCCGGTTCAAAAAGCT 58.952 45.000 0.00 0.00 0.00 3.74
245 246 1.047801 ATGCCCGGTTCAAAAAGCTT 58.952 45.000 0.00 0.00 0.00 3.74
261 262 1.391157 GCTTGCCCACTGTGTCCAAA 61.391 55.000 7.08 0.00 0.00 3.28
267 268 2.794103 CCCACTGTGTCCAAATGATCA 58.206 47.619 7.08 0.00 0.00 2.92
289 290 2.104967 TCAACCGTGATCTATTCCGGT 58.895 47.619 0.00 0.00 46.63 5.28
290 291 2.100252 TCAACCGTGATCTATTCCGGTC 59.900 50.000 0.00 0.00 45.06 4.79
291 292 0.666913 ACCGTGATCTATTCCGGTCG 59.333 55.000 0.00 0.00 43.52 4.79
292 293 0.663568 CCGTGATCTATTCCGGTCGC 60.664 60.000 0.00 0.00 35.01 5.19
293 294 0.663568 CGTGATCTATTCCGGTCGCC 60.664 60.000 0.00 0.00 0.00 5.54
295 296 1.733399 GATCTATTCCGGTCGCCGC 60.733 63.158 12.03 0.00 46.86 6.53
355 356 4.813526 CGCTGACTCCGACGACCG 62.814 72.222 0.00 0.00 38.18 4.79
462 463 1.070615 TAAGCTGAGCGCAACCACA 59.929 52.632 11.47 0.41 42.61 4.17
550 555 4.338710 CCGCCTTTTCCACCCCGA 62.339 66.667 0.00 0.00 0.00 5.14
596 601 1.736645 CGCCACCTCCACTACGTTG 60.737 63.158 0.00 0.00 0.00 4.10
598 603 0.250166 GCCACCTCCACTACGTTGTT 60.250 55.000 0.00 0.00 0.00 2.83
607 612 2.353406 CCACTACGTTGTTCTCCGGAAT 60.353 50.000 5.23 0.00 33.71 3.01
609 614 2.094338 ACTACGTTGTTCTCCGGAATCC 60.094 50.000 5.23 0.00 33.71 3.01
705 725 1.624312 GAGTTCTCCCCCGTTTCTCTT 59.376 52.381 0.00 0.00 0.00 2.85
806 826 1.343821 CGGCTACGCTTGCTTAACG 59.656 57.895 0.00 0.00 0.00 3.18
823 847 1.497722 CGGACTCTTTTGCTTCCGC 59.502 57.895 0.00 0.00 44.16 5.54
884 908 1.795170 CGGTCTTTGCCCACTTGGTG 61.795 60.000 0.00 0.00 36.04 4.17
887 911 0.467290 TCTTTGCCCACTTGGTGACC 60.467 55.000 0.00 0.00 35.23 4.02
949 973 2.920869 CGGCACCGAATCGAATCG 59.079 61.111 15.88 15.88 42.83 3.34
1005 1029 4.303853 CGATCGACGGACATGGAC 57.696 61.111 10.26 0.00 38.46 4.02
1006 1030 1.431845 CGATCGACGGACATGGACA 59.568 57.895 10.26 0.00 38.46 4.02
1221 1245 4.265073 ACTTCAAGCACAACAACTTCTCT 58.735 39.130 0.00 0.00 0.00 3.10
1257 1281 2.545113 GCTCAACACCTACGTGAGTTGA 60.545 50.000 18.86 18.86 46.40 3.18
1268 1292 2.093973 ACGTGAGTTGATCCACTCCATC 60.094 50.000 20.90 12.01 46.40 3.51
1269 1293 2.544685 GTGAGTTGATCCACTCCATCG 58.455 52.381 20.90 0.00 42.39 3.84
1270 1294 1.134699 TGAGTTGATCCACTCCATCGC 60.135 52.381 20.90 0.22 42.39 4.58
1272 1296 1.556911 AGTTGATCCACTCCATCGCTT 59.443 47.619 0.00 0.00 0.00 4.68
1273 1297 1.936547 GTTGATCCACTCCATCGCTTC 59.063 52.381 0.00 0.00 0.00 3.86
1274 1298 1.194218 TGATCCACTCCATCGCTTCA 58.806 50.000 0.00 0.00 0.00 3.02
1275 1299 1.554617 TGATCCACTCCATCGCTTCAA 59.445 47.619 0.00 0.00 0.00 2.69
1276 1300 1.936547 GATCCACTCCATCGCTTCAAC 59.063 52.381 0.00 0.00 0.00 3.18
1278 1302 0.036010 CCACTCCATCGCTTCAACCT 60.036 55.000 0.00 0.00 0.00 3.50
1280 1304 1.066573 CACTCCATCGCTTCAACCTCT 60.067 52.381 0.00 0.00 0.00 3.69
1281 1305 1.625818 ACTCCATCGCTTCAACCTCTT 59.374 47.619 0.00 0.00 0.00 2.85
1282 1306 2.039084 ACTCCATCGCTTCAACCTCTTT 59.961 45.455 0.00 0.00 0.00 2.52
1284 1308 3.486383 TCCATCGCTTCAACCTCTTTTT 58.514 40.909 0.00 0.00 0.00 1.94
1285 1309 3.502211 TCCATCGCTTCAACCTCTTTTTC 59.498 43.478 0.00 0.00 0.00 2.29
1286 1310 3.366374 CCATCGCTTCAACCTCTTTTTCC 60.366 47.826 0.00 0.00 0.00 3.13
1287 1311 1.871039 TCGCTTCAACCTCTTTTTCCG 59.129 47.619 0.00 0.00 0.00 4.30
1289 1313 2.032924 CGCTTCAACCTCTTTTTCCGTT 59.967 45.455 0.00 0.00 0.00 4.44
1291 1315 4.042398 GCTTCAACCTCTTTTTCCGTTTC 58.958 43.478 0.00 0.00 0.00 2.78
1293 1317 3.622630 TCAACCTCTTTTTCCGTTTCCA 58.377 40.909 0.00 0.00 0.00 3.53
1294 1318 4.017808 TCAACCTCTTTTTCCGTTTCCAA 58.982 39.130 0.00 0.00 0.00 3.53
1295 1319 4.463186 TCAACCTCTTTTTCCGTTTCCAAA 59.537 37.500 0.00 0.00 0.00 3.28
1296 1320 4.649088 ACCTCTTTTTCCGTTTCCAAAG 57.351 40.909 0.00 0.00 0.00 2.77
1297 1321 4.021229 ACCTCTTTTTCCGTTTCCAAAGT 58.979 39.130 0.00 0.00 0.00 2.66
1298 1322 4.097437 ACCTCTTTTTCCGTTTCCAAAGTC 59.903 41.667 0.00 0.00 0.00 3.01
1299 1323 4.499188 CCTCTTTTTCCGTTTCCAAAGTCC 60.499 45.833 0.00 0.00 0.00 3.85
1300 1324 4.017808 TCTTTTTCCGTTTCCAAAGTCCA 58.982 39.130 0.00 0.00 0.00 4.02
1301 1325 4.463186 TCTTTTTCCGTTTCCAAAGTCCAA 59.537 37.500 0.00 0.00 0.00 3.53
1303 1327 4.577834 TTTCCGTTTCCAAAGTCCAATC 57.422 40.909 0.00 0.00 0.00 2.67
1304 1328 2.147958 TCCGTTTCCAAAGTCCAATCG 58.852 47.619 0.00 0.00 0.00 3.34
1309 1333 1.974265 TCCAAAGTCCAATCGTTGCA 58.026 45.000 0.00 0.00 0.00 4.08
1310 1334 2.513753 TCCAAAGTCCAATCGTTGCAT 58.486 42.857 0.00 0.00 0.00 3.96
1311 1335 3.680490 TCCAAAGTCCAATCGTTGCATA 58.320 40.909 0.00 0.00 0.00 3.14
1312 1336 3.438781 TCCAAAGTCCAATCGTTGCATAC 59.561 43.478 0.00 0.00 0.00 2.39
1321 1345 3.765349 CGTTGCATACGGTTTGCTT 57.235 47.368 21.19 0.00 46.42 3.91
1322 1346 1.602191 CGTTGCATACGGTTTGCTTC 58.398 50.000 21.19 13.83 46.42 3.86
1323 1347 1.727857 CGTTGCATACGGTTTGCTTCC 60.728 52.381 21.19 10.10 46.42 3.46
1330 1354 3.676091 CGGTTTGCTTCCGTTCATC 57.324 52.632 6.63 0.00 42.62 2.92
1331 1355 0.168128 CGGTTTGCTTCCGTTCATCC 59.832 55.000 6.63 0.00 42.62 3.51
1332 1356 1.243902 GGTTTGCTTCCGTTCATCCA 58.756 50.000 0.00 0.00 0.00 3.41
1333 1357 1.818674 GGTTTGCTTCCGTTCATCCAT 59.181 47.619 0.00 0.00 0.00 3.41
1334 1358 2.415893 GGTTTGCTTCCGTTCATCCATG 60.416 50.000 0.00 0.00 0.00 3.66
1335 1359 2.487762 GTTTGCTTCCGTTCATCCATGA 59.512 45.455 0.00 0.00 34.44 3.07
1336 1360 1.737838 TGCTTCCGTTCATCCATGAC 58.262 50.000 0.00 0.00 36.36 3.06
1337 1361 0.652592 GCTTCCGTTCATCCATGACG 59.347 55.000 0.00 0.00 36.36 4.35
1338 1362 2.007049 GCTTCCGTTCATCCATGACGT 61.007 52.381 0.00 0.00 36.36 4.34
1339 1363 2.346803 CTTCCGTTCATCCATGACGTT 58.653 47.619 0.00 0.00 36.36 3.99
1340 1364 2.465860 TCCGTTCATCCATGACGTTT 57.534 45.000 0.00 0.00 36.36 3.60
1341 1365 2.773487 TCCGTTCATCCATGACGTTTT 58.227 42.857 0.00 0.00 36.36 2.43
1342 1366 2.739913 TCCGTTCATCCATGACGTTTTC 59.260 45.455 0.00 0.00 36.36 2.29
1343 1367 2.482336 CCGTTCATCCATGACGTTTTCA 59.518 45.455 0.00 0.00 36.36 2.69
1344 1368 3.479006 CGTTCATCCATGACGTTTTCAC 58.521 45.455 0.00 0.00 36.92 3.18
1345 1369 3.186409 CGTTCATCCATGACGTTTTCACT 59.814 43.478 0.00 0.00 36.92 3.41
1346 1370 4.387559 CGTTCATCCATGACGTTTTCACTA 59.612 41.667 0.00 0.00 36.92 2.74
1347 1371 5.618561 GTTCATCCATGACGTTTTCACTAC 58.381 41.667 0.00 0.00 36.92 2.73
1348 1372 4.888917 TCATCCATGACGTTTTCACTACA 58.111 39.130 0.00 0.00 36.92 2.74
1349 1373 5.487433 TCATCCATGACGTTTTCACTACAT 58.513 37.500 0.00 0.00 36.92 2.29
1350 1374 5.351189 TCATCCATGACGTTTTCACTACATG 59.649 40.000 0.00 0.00 36.92 3.21
1351 1375 4.888917 TCCATGACGTTTTCACTACATGA 58.111 39.130 0.00 0.00 36.92 3.07
1352 1376 5.487433 TCCATGACGTTTTCACTACATGAT 58.513 37.500 0.00 0.00 36.92 2.45
1353 1377 5.937540 TCCATGACGTTTTCACTACATGATT 59.062 36.000 0.00 0.00 36.92 2.57
1354 1378 7.100409 TCCATGACGTTTTCACTACATGATTA 58.900 34.615 0.00 0.00 36.92 1.75
1355 1379 7.064134 TCCATGACGTTTTCACTACATGATTAC 59.936 37.037 0.00 0.00 36.92 1.89
1356 1380 6.384178 TGACGTTTTCACTACATGATTACG 57.616 37.500 0.00 0.00 44.12 3.18
1357 1381 5.346551 TGACGTTTTCACTACATGATTACGG 59.653 40.000 0.00 0.00 43.44 4.02
1358 1382 5.472148 ACGTTTTCACTACATGATTACGGA 58.528 37.500 0.00 0.00 43.44 4.69
1359 1383 6.103997 ACGTTTTCACTACATGATTACGGAT 58.896 36.000 0.00 0.00 43.44 4.18
1360 1384 6.035650 ACGTTTTCACTACATGATTACGGATG 59.964 38.462 0.00 0.00 43.44 3.51
1361 1385 6.035650 CGTTTTCACTACATGATTACGGATGT 59.964 38.462 0.00 0.00 39.21 3.06
1362 1386 7.221259 CGTTTTCACTACATGATTACGGATGTA 59.779 37.037 0.00 0.00 39.21 2.29
1363 1387 9.042008 GTTTTCACTACATGATTACGGATGTAT 57.958 33.333 0.00 0.00 37.11 2.29
1367 1391 9.908152 TCACTACATGATTACGGATGTATAAAG 57.092 33.333 0.00 0.00 35.13 1.85
1368 1392 9.908152 CACTACATGATTACGGATGTATAAAGA 57.092 33.333 0.00 0.00 35.13 2.52
1369 1393 9.909644 ACTACATGATTACGGATGTATAAAGAC 57.090 33.333 0.00 0.00 35.13 3.01
1370 1394 9.908152 CTACATGATTACGGATGTATAAAGACA 57.092 33.333 0.00 0.00 35.13 3.41
1402 1426 9.817809 TTAGAGTATAGATTCGTTCATTTTGCT 57.182 29.630 0.00 0.00 0.00 3.91
1403 1427 8.723942 AGAGTATAGATTCGTTCATTTTGCTT 57.276 30.769 0.00 0.00 0.00 3.91
1404 1428 8.821894 AGAGTATAGATTCGTTCATTTTGCTTC 58.178 33.333 0.00 0.00 0.00 3.86
1405 1429 7.621991 AGTATAGATTCGTTCATTTTGCTTCG 58.378 34.615 0.00 0.00 0.00 3.79
1406 1430 4.749245 AGATTCGTTCATTTTGCTTCGT 57.251 36.364 0.00 0.00 0.00 3.85
1407 1431 5.856126 AGATTCGTTCATTTTGCTTCGTA 57.144 34.783 0.00 0.00 0.00 3.43
1408 1432 6.422776 AGATTCGTTCATTTTGCTTCGTAT 57.577 33.333 0.00 0.00 0.00 3.06
1409 1433 6.250819 AGATTCGTTCATTTTGCTTCGTATG 58.749 36.000 0.00 0.00 0.00 2.39
1410 1434 5.351233 TTCGTTCATTTTGCTTCGTATGT 57.649 34.783 0.00 0.00 0.00 2.29
1411 1435 6.469139 TTCGTTCATTTTGCTTCGTATGTA 57.531 33.333 0.00 0.00 0.00 2.29
1412 1436 6.089920 TCGTTCATTTTGCTTCGTATGTAG 57.910 37.500 0.00 0.00 0.00 2.74
1413 1437 5.636121 TCGTTCATTTTGCTTCGTATGTAGT 59.364 36.000 0.00 0.00 0.00 2.73
1414 1438 5.952064 CGTTCATTTTGCTTCGTATGTAGTC 59.048 40.000 0.00 0.00 0.00 2.59
1415 1439 6.248631 GTTCATTTTGCTTCGTATGTAGTCC 58.751 40.000 0.00 0.00 0.00 3.85
1416 1440 4.565166 TCATTTTGCTTCGTATGTAGTCCG 59.435 41.667 0.00 0.00 0.00 4.79
1417 1441 3.581024 TTTGCTTCGTATGTAGTCCGT 57.419 42.857 0.00 0.00 0.00 4.69
1418 1442 4.700268 TTTGCTTCGTATGTAGTCCGTA 57.300 40.909 0.00 0.00 0.00 4.02
1419 1443 4.906065 TTGCTTCGTATGTAGTCCGTAT 57.094 40.909 0.00 0.00 0.00 3.06
1420 1444 4.906065 TGCTTCGTATGTAGTCCGTATT 57.094 40.909 0.00 0.00 0.00 1.89
1421 1445 4.603985 TGCTTCGTATGTAGTCCGTATTG 58.396 43.478 0.00 0.00 0.00 1.90
1422 1446 4.336153 TGCTTCGTATGTAGTCCGTATTGA 59.664 41.667 0.00 0.00 0.00 2.57
1423 1447 5.163632 TGCTTCGTATGTAGTCCGTATTGAA 60.164 40.000 0.00 0.00 0.00 2.69
1424 1448 5.745294 GCTTCGTATGTAGTCCGTATTGAAA 59.255 40.000 0.00 0.00 0.00 2.69
1425 1449 6.291479 GCTTCGTATGTAGTCCGTATTGAAAC 60.291 42.308 0.00 0.00 0.00 2.78
1426 1450 5.581605 TCGTATGTAGTCCGTATTGAAACC 58.418 41.667 0.00 0.00 0.00 3.27
1427 1451 5.357878 TCGTATGTAGTCCGTATTGAAACCT 59.642 40.000 0.00 0.00 0.00 3.50
1428 1452 5.684626 CGTATGTAGTCCGTATTGAAACCTC 59.315 44.000 0.00 0.00 0.00 3.85
1429 1453 5.934402 ATGTAGTCCGTATTGAAACCTCT 57.066 39.130 0.00 0.00 0.00 3.69
1430 1454 7.254898 CGTATGTAGTCCGTATTGAAACCTCTA 60.255 40.741 0.00 0.00 0.00 2.43
1431 1455 6.839124 TGTAGTCCGTATTGAAACCTCTAA 57.161 37.500 0.00 0.00 0.00 2.10
1432 1456 7.230849 TGTAGTCCGTATTGAAACCTCTAAA 57.769 36.000 0.00 0.00 0.00 1.85
1433 1457 7.669427 TGTAGTCCGTATTGAAACCTCTAAAA 58.331 34.615 0.00 0.00 0.00 1.52
1434 1458 8.149647 TGTAGTCCGTATTGAAACCTCTAAAAA 58.850 33.333 0.00 0.00 0.00 1.94
1435 1459 7.668525 AGTCCGTATTGAAACCTCTAAAAAG 57.331 36.000 0.00 0.00 0.00 2.27
1436 1460 7.447594 AGTCCGTATTGAAACCTCTAAAAAGA 58.552 34.615 0.00 0.00 0.00 2.52
1437 1461 7.387122 AGTCCGTATTGAAACCTCTAAAAAGAC 59.613 37.037 0.00 0.00 0.00 3.01
1438 1462 7.387122 GTCCGTATTGAAACCTCTAAAAAGACT 59.613 37.037 0.00 0.00 0.00 3.24
1439 1463 7.935210 TCCGTATTGAAACCTCTAAAAAGACTT 59.065 33.333 0.00 0.00 0.00 3.01
1440 1464 9.211485 CCGTATTGAAACCTCTAAAAAGACTTA 57.789 33.333 0.00 0.00 0.00 2.24
1490 1514 8.708742 TCTTGATAATTTTCTTGTGACGTACTG 58.291 33.333 0.00 0.00 0.00 2.74
1493 1517 9.214957 TGATAATTTTCTTGTGACGTACTGATT 57.785 29.630 0.00 0.00 0.00 2.57
1494 1518 9.478019 GATAATTTTCTTGTGACGTACTGATTG 57.522 33.333 0.00 0.00 0.00 2.67
1495 1519 6.861065 ATTTTCTTGTGACGTACTGATTGT 57.139 33.333 0.00 0.00 0.00 2.71
1505 1529 7.041440 TGTGACGTACTGATTGTTGATTTCATT 60.041 33.333 0.00 0.00 0.00 2.57
1508 1532 7.648142 ACGTACTGATTGTTGATTTCATTTGT 58.352 30.769 0.00 0.00 0.00 2.83
1509 1533 8.134895 ACGTACTGATTGTTGATTTCATTTGTT 58.865 29.630 0.00 0.00 0.00 2.83
1510 1534 8.967218 CGTACTGATTGTTGATTTCATTTGTTT 58.033 29.630 0.00 0.00 0.00 2.83
1512 1536 8.945481 ACTGATTGTTGATTTCATTTGTTTGA 57.055 26.923 0.00 0.00 0.00 2.69
1513 1537 9.550406 ACTGATTGTTGATTTCATTTGTTTGAT 57.450 25.926 0.00 0.00 0.00 2.57
1515 1539 8.701540 TGATTGTTGATTTCATTTGTTTGATCG 58.298 29.630 0.00 0.00 0.00 3.69
1527 1551 3.399330 TGTTTGATCGTCTCAGGGTTTC 58.601 45.455 0.00 0.00 34.68 2.78
1596 1620 2.753043 GGGCACATGCACCTCCTG 60.753 66.667 6.15 0.00 44.36 3.86
1797 1821 1.227205 GATGCAGTCGCTGGAGGAG 60.227 63.158 8.57 0.00 34.87 3.69
1853 1877 4.760047 GGCCTCCGTGCGTGACAT 62.760 66.667 0.00 0.00 0.00 3.06
1856 1880 2.261361 CTCCGTGCGTGACATCCA 59.739 61.111 0.00 0.00 0.00 3.41
1917 1944 3.059982 CTGGAACTGGAGCCGACA 58.940 61.111 0.00 0.00 0.00 4.35
1944 1971 1.270907 TCAGCAAGAAGAGGAGGGTC 58.729 55.000 0.00 0.00 0.00 4.46
1964 1991 1.624323 CGACGATCGGTTTCTTCGC 59.376 57.895 20.98 0.00 36.00 4.70
2103 2145 3.708220 GAAGCTCGTCCAGAGGGCG 62.708 68.421 3.22 3.22 46.91 6.13
2132 2177 0.674895 GCGCCCTCTGAAGACATGTT 60.675 55.000 0.00 0.00 0.00 2.71
2139 2184 1.436600 CTGAAGACATGTTCAGCGCT 58.563 50.000 13.25 2.64 45.22 5.92
2142 2187 0.604780 AAGACATGTTCAGCGCTGCT 60.605 50.000 32.44 18.35 40.77 4.24
2143 2188 0.247460 AGACATGTTCAGCGCTGCTA 59.753 50.000 32.44 19.44 36.40 3.49
2145 2190 0.036952 ACATGTTCAGCGCTGCTACT 60.037 50.000 32.44 17.30 36.40 2.57
2146 2191 0.372679 CATGTTCAGCGCTGCTACTG 59.627 55.000 32.44 22.94 36.40 2.74
2147 2192 1.364626 ATGTTCAGCGCTGCTACTGC 61.365 55.000 32.44 16.92 36.40 4.40
2148 2193 1.739562 GTTCAGCGCTGCTACTGCT 60.740 57.895 32.44 4.54 36.40 4.24
2149 2194 1.004560 TTCAGCGCTGCTACTGCTT 60.005 52.632 32.44 0.00 36.40 3.91
2150 2195 1.016130 TTCAGCGCTGCTACTGCTTC 61.016 55.000 32.44 0.00 36.40 3.86
2151 2196 1.447489 CAGCGCTGCTACTGCTTCT 60.447 57.895 26.68 0.00 36.40 2.85
2152 2197 1.447489 AGCGCTGCTACTGCTTCTG 60.447 57.895 10.39 0.00 36.99 3.02
2153 2198 3.088044 CGCTGCTACTGCTTCTGC 58.912 61.111 0.00 0.00 40.48 4.26
2154 2199 1.447489 CGCTGCTACTGCTTCTGCT 60.447 57.895 0.00 0.00 40.48 4.24
2155 2200 1.018226 CGCTGCTACTGCTTCTGCTT 61.018 55.000 0.00 0.00 40.48 3.91
2156 2201 0.726256 GCTGCTACTGCTTCTGCTTC 59.274 55.000 0.00 0.00 40.48 3.86
2157 2202 1.675415 GCTGCTACTGCTTCTGCTTCT 60.675 52.381 0.00 0.00 40.48 2.85
2224 2272 0.323542 ACCAGTGGAGACCGGAGTAG 60.324 60.000 18.40 0.00 0.00 2.57
2235 2283 1.342076 ACCGGAGTAGATCTTCAGCCA 60.342 52.381 9.46 0.00 0.00 4.75
2236 2284 1.757118 CCGGAGTAGATCTTCAGCCAA 59.243 52.381 0.00 0.00 0.00 4.52
2268 2316 0.105658 TAGCAGAGCCTCCGGGTTAT 60.106 55.000 0.00 0.00 31.55 1.89
2307 2355 7.068593 CCAATGCTACTATTCCCAGAAATTCAA 59.931 37.037 0.00 0.00 0.00 2.69
2414 2474 0.037326 GCCGAGACTCCACATGAACA 60.037 55.000 0.00 0.00 0.00 3.18
2451 2511 0.250295 TGTTCTGGGAGCGGTTTCTG 60.250 55.000 0.00 0.00 0.00 3.02
2454 2514 1.118965 TCTGGGAGCGGTTTCTGACA 61.119 55.000 0.00 0.00 0.00 3.58
2463 2523 1.557443 GGTTTCTGACAGACACGCCG 61.557 60.000 14.08 0.00 0.00 6.46
2504 2564 0.107017 AGCCATGAATCCAAGGACGG 60.107 55.000 0.00 0.00 33.12 4.79
2513 2573 1.348064 TCCAAGGACGGTGTGAAGAT 58.652 50.000 0.00 0.00 0.00 2.40
2514 2574 1.001974 TCCAAGGACGGTGTGAAGATG 59.998 52.381 0.00 0.00 0.00 2.90
2556 2616 1.723003 GGTCACCGTAACAATGTCGAC 59.277 52.381 9.11 9.11 0.00 4.20
2634 2694 3.748048 CCTACCATTTCCGCTCATGTATG 59.252 47.826 0.00 0.00 0.00 2.39
2642 2702 0.957395 CGCTCATGTATGGCCCATCC 60.957 60.000 0.00 0.00 0.00 3.51
2653 2713 6.174760 TGTATGGCCCATCCGTAAATTATAC 58.825 40.000 0.00 0.00 38.04 1.47
2654 2714 4.986054 TGGCCCATCCGTAAATTATACT 57.014 40.909 0.00 0.00 37.80 2.12
2655 2715 4.901868 TGGCCCATCCGTAAATTATACTC 58.098 43.478 0.00 0.00 37.80 2.59
2656 2716 4.259356 GGCCCATCCGTAAATTATACTCC 58.741 47.826 0.00 0.00 0.00 3.85
2657 2717 4.259356 GCCCATCCGTAAATTATACTCCC 58.741 47.826 0.00 0.00 0.00 4.30
2658 2718 4.019591 GCCCATCCGTAAATTATACTCCCT 60.020 45.833 0.00 0.00 0.00 4.20
2659 2719 5.731591 CCCATCCGTAAATTATACTCCCTC 58.268 45.833 0.00 0.00 0.00 4.30
2660 2720 5.484290 CCCATCCGTAAATTATACTCCCTCT 59.516 44.000 0.00 0.00 0.00 3.69
2661 2721 6.398918 CCATCCGTAAATTATACTCCCTCTG 58.601 44.000 0.00 0.00 0.00 3.35
2662 2722 6.014499 CCATCCGTAAATTATACTCCCTCTGT 60.014 42.308 0.00 0.00 0.00 3.41
2663 2723 7.442656 CATCCGTAAATTATACTCCCTCTGTT 58.557 38.462 0.00 0.00 0.00 3.16
2664 2724 7.047460 TCCGTAAATTATACTCCCTCTGTTC 57.953 40.000 0.00 0.00 0.00 3.18
2665 2725 6.041296 TCCGTAAATTATACTCCCTCTGTTCC 59.959 42.308 0.00 0.00 0.00 3.62
2666 2726 5.919141 CGTAAATTATACTCCCTCTGTTCCG 59.081 44.000 0.00 0.00 0.00 4.30
2667 2727 6.238842 CGTAAATTATACTCCCTCTGTTCCGA 60.239 42.308 0.00 0.00 0.00 4.55
2668 2728 6.555463 AAATTATACTCCCTCTGTTCCGAA 57.445 37.500 0.00 0.00 0.00 4.30
2669 2729 6.749036 AATTATACTCCCTCTGTTCCGAAT 57.251 37.500 0.00 0.00 0.00 3.34
2670 2730 6.749036 ATTATACTCCCTCTGTTCCGAATT 57.251 37.500 0.00 0.00 0.00 2.17
2671 2731 7.850935 ATTATACTCCCTCTGTTCCGAATTA 57.149 36.000 0.00 0.00 0.00 1.40
2672 2732 3.889520 ACTCCCTCTGTTCCGAATTAC 57.110 47.619 0.00 0.00 0.00 1.89
2673 2733 3.442076 ACTCCCTCTGTTCCGAATTACT 58.558 45.455 0.00 0.00 0.00 2.24
2674 2734 3.838903 ACTCCCTCTGTTCCGAATTACTT 59.161 43.478 0.00 0.00 0.00 2.24
2675 2735 4.184629 CTCCCTCTGTTCCGAATTACTTG 58.815 47.826 0.00 0.00 0.00 3.16
2676 2736 3.581332 TCCCTCTGTTCCGAATTACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
2677 2737 3.933332 CCCTCTGTTCCGAATTACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
2678 2738 4.322801 CCCTCTGTTCCGAATTACTTGTCT 60.323 45.833 0.00 0.00 0.00 3.41
2679 2739 4.865365 CCTCTGTTCCGAATTACTTGTCTC 59.135 45.833 0.00 0.00 0.00 3.36
2680 2740 4.482386 TCTGTTCCGAATTACTTGTCTCG 58.518 43.478 0.00 0.00 0.00 4.04
2688 2748 5.769367 CGAATTACTTGTCTCGGATATGGA 58.231 41.667 0.00 0.00 0.00 3.41
2689 2749 6.390721 CGAATTACTTGTCTCGGATATGGAT 58.609 40.000 0.00 0.00 0.00 3.41
2690 2750 6.309009 CGAATTACTTGTCTCGGATATGGATG 59.691 42.308 0.00 0.00 0.00 3.51
2691 2751 6.672266 ATTACTTGTCTCGGATATGGATGT 57.328 37.500 0.00 0.00 0.00 3.06
2692 2752 7.776618 ATTACTTGTCTCGGATATGGATGTA 57.223 36.000 0.00 0.00 0.00 2.29
2693 2753 7.776618 TTACTTGTCTCGGATATGGATGTAT 57.223 36.000 0.00 0.00 0.00 2.29
2694 2754 6.274157 ACTTGTCTCGGATATGGATGTATC 57.726 41.667 0.00 0.00 0.00 2.24
2695 2755 6.013379 ACTTGTCTCGGATATGGATGTATCT 58.987 40.000 0.00 0.00 32.78 1.98
2696 2756 7.175797 ACTTGTCTCGGATATGGATGTATCTA 58.824 38.462 0.00 0.00 32.78 1.98
2697 2757 7.338196 ACTTGTCTCGGATATGGATGTATCTAG 59.662 40.741 0.00 0.00 32.78 2.43
2698 2758 6.958767 TGTCTCGGATATGGATGTATCTAGA 58.041 40.000 0.00 0.00 32.78 2.43
2699 2759 7.402862 TGTCTCGGATATGGATGTATCTAGAA 58.597 38.462 0.00 0.00 31.35 2.10
2700 2760 7.337184 TGTCTCGGATATGGATGTATCTAGAAC 59.663 40.741 0.00 0.00 31.35 3.01
2701 2761 7.554835 GTCTCGGATATGGATGTATCTAGAACT 59.445 40.741 0.00 0.00 31.35 3.01
2702 2762 8.769359 TCTCGGATATGGATGTATCTAGAACTA 58.231 37.037 0.00 0.00 32.78 2.24
2703 2763 9.397280 CTCGGATATGGATGTATCTAGAACTAA 57.603 37.037 0.00 0.00 32.78 2.24
2704 2764 9.175312 TCGGATATGGATGTATCTAGAACTAAC 57.825 37.037 0.00 0.00 32.78 2.34
2705 2765 8.957466 CGGATATGGATGTATCTAGAACTAACA 58.043 37.037 0.00 0.00 32.78 2.41
2732 2792 8.637196 ACATCTAGATACATCCATTTCTACGA 57.363 34.615 4.54 0.00 0.00 3.43
2733 2793 8.516234 ACATCTAGATACATCCATTTCTACGAC 58.484 37.037 4.54 0.00 0.00 4.34
2734 2794 8.515414 CATCTAGATACATCCATTTCTACGACA 58.485 37.037 4.54 0.00 0.00 4.35
2735 2795 8.459911 TCTAGATACATCCATTTCTACGACAA 57.540 34.615 0.00 0.00 0.00 3.18
2736 2796 8.568794 TCTAGATACATCCATTTCTACGACAAG 58.431 37.037 0.00 0.00 0.00 3.16
2737 2797 7.113658 AGATACATCCATTTCTACGACAAGT 57.886 36.000 0.00 0.00 0.00 3.16
2738 2798 8.234136 AGATACATCCATTTCTACGACAAGTA 57.766 34.615 0.00 0.00 0.00 2.24
2739 2799 8.692710 AGATACATCCATTTCTACGACAAGTAA 58.307 33.333 0.00 0.00 34.45 2.24
2740 2800 9.477484 GATACATCCATTTCTACGACAAGTAAT 57.523 33.333 0.00 0.00 34.45 1.89
2741 2801 9.832445 ATACATCCATTTCTACGACAAGTAATT 57.168 29.630 0.00 0.00 34.45 1.40
2742 2802 8.197988 ACATCCATTTCTACGACAAGTAATTC 57.802 34.615 0.00 0.00 34.45 2.17
2743 2803 7.280205 ACATCCATTTCTACGACAAGTAATTCC 59.720 37.037 0.00 0.00 34.45 3.01
2744 2804 5.808540 TCCATTTCTACGACAAGTAATTCCG 59.191 40.000 0.00 0.00 34.45 4.30
2745 2805 5.808540 CCATTTCTACGACAAGTAATTCCGA 59.191 40.000 0.00 0.00 34.45 4.55
2746 2806 6.311935 CCATTTCTACGACAAGTAATTCCGAA 59.688 38.462 0.00 0.00 34.45 4.30
2747 2807 6.695292 TTTCTACGACAAGTAATTCCGAAC 57.305 37.500 0.00 0.00 34.45 3.95
2748 2808 5.375417 TCTACGACAAGTAATTCCGAACA 57.625 39.130 0.00 0.00 34.45 3.18
2749 2809 5.771469 TCTACGACAAGTAATTCCGAACAA 58.229 37.500 0.00 0.00 34.45 2.83
2750 2810 6.215121 TCTACGACAAGTAATTCCGAACAAA 58.785 36.000 0.00 0.00 34.45 2.83
2751 2811 5.338614 ACGACAAGTAATTCCGAACAAAG 57.661 39.130 0.00 0.00 0.00 2.77
2752 2812 4.212636 ACGACAAGTAATTCCGAACAAAGG 59.787 41.667 0.00 0.00 0.00 3.11
2753 2813 4.449743 CGACAAGTAATTCCGAACAAAGGA 59.550 41.667 0.00 0.00 35.69 3.36
2772 2837 2.479219 GGAAGTAGTTTAGCCCGTCTCG 60.479 54.545 0.00 0.00 0.00 4.04
2814 2880 8.618702 ACAAGCATCTCCTTTCAGATATATTG 57.381 34.615 0.00 0.00 31.47 1.90
2816 2882 9.716531 CAAGCATCTCCTTTCAGATATATTGTA 57.283 33.333 0.00 0.00 31.47 2.41
2817 2883 9.717942 AAGCATCTCCTTTCAGATATATTGTAC 57.282 33.333 0.00 0.00 31.47 2.90
2818 2884 8.031864 AGCATCTCCTTTCAGATATATTGTACG 58.968 37.037 0.00 0.00 31.47 3.67
2843 2912 0.881796 TAGCTCCTCGTCACACACTG 59.118 55.000 0.00 0.00 0.00 3.66
2863 2932 9.404348 CACACTGTGCACATTTGTAAATTATTA 57.596 29.630 25.72 0.00 0.00 0.98
2865 2934 9.624697 CACTGTGCACATTTGTAAATTATTAGT 57.375 29.630 22.00 5.68 0.00 2.24
2866 2935 9.840427 ACTGTGCACATTTGTAAATTATTAGTC 57.160 29.630 22.00 0.00 0.00 2.59
2868 2937 7.483375 TGTGCACATTTGTAAATTATTAGTCGC 59.517 33.333 17.42 0.00 0.00 5.19
2869 2938 6.970043 TGCACATTTGTAAATTATTAGTCGCC 59.030 34.615 0.00 0.00 0.00 5.54
2888 2957 7.101054 AGTCGCCAAGATACAATTTTGTAGTA 58.899 34.615 8.90 0.00 45.80 1.82
2905 2974 1.344763 AGTACAGTGCCCTGACTTGTC 59.655 52.381 2.19 0.00 41.50 3.18
2918 2987 3.462982 TGACTTGTCGTGTGTATGCTTT 58.537 40.909 0.00 0.00 0.00 3.51
2929 3013 4.215399 GTGTGTATGCTTTGTTCCTGCTAA 59.785 41.667 0.00 0.00 0.00 3.09
2932 3016 6.015519 TGTGTATGCTTTGTTCCTGCTAAAAT 60.016 34.615 0.00 0.00 0.00 1.82
2933 3017 7.175816 TGTGTATGCTTTGTTCCTGCTAAAATA 59.824 33.333 0.00 0.00 0.00 1.40
2934 3018 8.026607 GTGTATGCTTTGTTCCTGCTAAAATAA 58.973 33.333 0.00 0.00 0.00 1.40
2935 3019 8.748412 TGTATGCTTTGTTCCTGCTAAAATAAT 58.252 29.630 0.00 0.00 0.00 1.28
2936 3020 9.237846 GTATGCTTTGTTCCTGCTAAAATAATC 57.762 33.333 0.00 0.00 0.00 1.75
2937 3021 7.466746 TGCTTTGTTCCTGCTAAAATAATCT 57.533 32.000 0.00 0.00 0.00 2.40
2938 3022 7.538575 TGCTTTGTTCCTGCTAAAATAATCTC 58.461 34.615 0.00 0.00 0.00 2.75
2939 3023 6.975197 GCTTTGTTCCTGCTAAAATAATCTCC 59.025 38.462 0.00 0.00 0.00 3.71
2940 3024 7.404671 TTTGTTCCTGCTAAAATAATCTCCC 57.595 36.000 0.00 0.00 0.00 4.30
2941 3025 6.327386 TGTTCCTGCTAAAATAATCTCCCT 57.673 37.500 0.00 0.00 0.00 4.20
2942 3026 6.122277 TGTTCCTGCTAAAATAATCTCCCTG 58.878 40.000 0.00 0.00 0.00 4.45
2943 3027 6.069673 TGTTCCTGCTAAAATAATCTCCCTGA 60.070 38.462 0.00 0.00 0.00 3.86
2944 3028 5.930135 TCCTGCTAAAATAATCTCCCTGAC 58.070 41.667 0.00 0.00 0.00 3.51
2945 3029 4.752101 CCTGCTAAAATAATCTCCCTGACG 59.248 45.833 0.00 0.00 0.00 4.35
2946 3030 5.353394 TGCTAAAATAATCTCCCTGACGT 57.647 39.130 0.00 0.00 0.00 4.34
2947 3031 5.741011 TGCTAAAATAATCTCCCTGACGTT 58.259 37.500 0.00 0.00 0.00 3.99
2948 3032 5.584649 TGCTAAAATAATCTCCCTGACGTTG 59.415 40.000 0.00 0.00 0.00 4.10
2949 3033 5.585047 GCTAAAATAATCTCCCTGACGTTGT 59.415 40.000 0.00 0.00 0.00 3.32
2950 3034 5.880054 AAAATAATCTCCCTGACGTTGTG 57.120 39.130 0.00 0.00 0.00 3.33
2951 3035 2.380084 TAATCTCCCTGACGTTGTGC 57.620 50.000 0.00 0.00 0.00 4.57
2953 3037 2.507110 ATCTCCCTGACGTTGTGCGG 62.507 60.000 0.00 0.00 46.52 5.69
2960 3044 2.967076 ACGTTGTGCGGCTGTCTG 60.967 61.111 0.00 0.00 46.52 3.51
2961 3045 3.716006 CGTTGTGCGGCTGTCTGG 61.716 66.667 0.00 0.00 36.85 3.86
2962 3046 2.591715 GTTGTGCGGCTGTCTGGT 60.592 61.111 0.00 0.00 0.00 4.00
2963 3047 2.186826 GTTGTGCGGCTGTCTGGTT 61.187 57.895 0.00 0.00 0.00 3.67
2964 3048 0.882927 GTTGTGCGGCTGTCTGGTTA 60.883 55.000 0.00 0.00 0.00 2.85
2965 3049 0.882927 TTGTGCGGCTGTCTGGTTAC 60.883 55.000 0.00 0.00 0.00 2.50
2966 3050 2.033194 GTGCGGCTGTCTGGTTACC 61.033 63.158 0.00 0.00 0.00 2.85
2967 3051 2.436115 GCGGCTGTCTGGTTACCC 60.436 66.667 0.00 0.00 0.00 3.69
2968 3052 2.125673 CGGCTGTCTGGTTACCCG 60.126 66.667 0.00 0.00 0.00 5.28
2969 3053 2.642254 CGGCTGTCTGGTTACCCGA 61.642 63.158 0.00 0.00 38.04 5.14
2970 3054 1.218316 GGCTGTCTGGTTACCCGAG 59.782 63.158 0.00 0.00 0.00 4.63
2971 3055 1.448013 GCTGTCTGGTTACCCGAGC 60.448 63.158 0.00 0.00 0.00 5.03
2972 3056 1.972198 CTGTCTGGTTACCCGAGCA 59.028 57.895 0.00 0.00 0.00 4.26
2973 3057 0.320374 CTGTCTGGTTACCCGAGCAA 59.680 55.000 0.00 0.00 0.00 3.91
2974 3058 0.981183 TGTCTGGTTACCCGAGCAAT 59.019 50.000 0.00 0.00 0.00 3.56
2975 3059 1.066430 TGTCTGGTTACCCGAGCAATC 60.066 52.381 0.00 0.00 0.00 2.67
2976 3060 1.207329 GTCTGGTTACCCGAGCAATCT 59.793 52.381 0.00 0.00 0.00 2.40
2977 3061 2.429610 GTCTGGTTACCCGAGCAATCTA 59.570 50.000 0.00 0.00 0.00 1.98
2978 3062 3.101437 TCTGGTTACCCGAGCAATCTAA 58.899 45.455 0.00 0.00 0.00 2.10
2979 3063 3.709653 TCTGGTTACCCGAGCAATCTAAT 59.290 43.478 0.00 0.00 0.00 1.73
2980 3064 4.163458 TCTGGTTACCCGAGCAATCTAATT 59.837 41.667 0.00 0.00 0.00 1.40
2981 3065 5.364446 TCTGGTTACCCGAGCAATCTAATTA 59.636 40.000 0.00 0.00 0.00 1.40
2982 3066 5.991861 TGGTTACCCGAGCAATCTAATTAA 58.008 37.500 0.00 0.00 0.00 1.40
3007 3091 0.676184 TTGTATTGCGGCTGCCAAAA 59.324 45.000 20.29 12.36 41.78 2.44
3056 3142 1.657538 CGTTGAAAGACGCAACTCAGC 60.658 52.381 0.00 0.00 42.53 4.26
3061 3147 3.242739 TGAAAGACGCAACTCAGCTTTTC 60.243 43.478 0.00 0.00 32.55 2.29
3065 3152 3.495001 AGACGCAACTCAGCTTTTCTTAC 59.505 43.478 0.00 0.00 0.00 2.34
3077 3164 3.364964 GCTTTTCTTACATGTGGTCACGG 60.365 47.826 9.11 0.00 0.00 4.94
3078 3165 3.478857 TTTCTTACATGTGGTCACGGT 57.521 42.857 9.11 0.86 0.00 4.83
3089 3176 3.446161 TGTGGTCACGGTATTCTAGAAGG 59.554 47.826 11.53 3.08 0.00 3.46
3090 3177 3.028850 TGGTCACGGTATTCTAGAAGGG 58.971 50.000 11.53 0.00 0.00 3.95
3091 3178 2.223994 GGTCACGGTATTCTAGAAGGGC 60.224 54.545 11.53 3.55 0.00 5.19
3092 3179 2.429610 GTCACGGTATTCTAGAAGGGCA 59.570 50.000 11.53 0.00 0.00 5.36
3168 3255 8.353423 ACAGATTGCCTTGATTAAACTGTTAT 57.647 30.769 0.00 0.00 34.96 1.89
3262 4794 3.443329 ACAGTTCATGTCAACAGCACAAA 59.557 39.130 0.00 0.00 37.75 2.83
3320 4858 6.480981 GCCGGCATTATACTAGTAAAGAACAA 59.519 38.462 24.80 0.00 0.00 2.83
3391 4940 0.034896 ATTGGTGACAGGTGGACGAC 59.965 55.000 0.00 0.00 44.54 4.34
3596 5148 3.077359 GTTGGGAAGTCACCATCTTCAG 58.923 50.000 7.74 0.00 41.88 3.02
3597 5149 2.619931 TGGGAAGTCACCATCTTCAGA 58.380 47.619 7.74 0.00 41.88 3.27
3598 5150 2.978978 TGGGAAGTCACCATCTTCAGAA 59.021 45.455 7.74 0.00 41.88 3.02
3599 5151 3.588842 TGGGAAGTCACCATCTTCAGAAT 59.411 43.478 7.74 0.00 41.88 2.40
3600 5152 4.195416 GGGAAGTCACCATCTTCAGAATC 58.805 47.826 7.74 0.00 41.88 2.52
3601 5153 4.323792 GGGAAGTCACCATCTTCAGAATCA 60.324 45.833 7.74 0.00 41.88 2.57
3602 5154 5.248640 GGAAGTCACCATCTTCAGAATCAA 58.751 41.667 7.74 0.00 41.88 2.57
3603 5155 5.707298 GGAAGTCACCATCTTCAGAATCAAA 59.293 40.000 7.74 0.00 41.88 2.69
3604 5156 6.128063 GGAAGTCACCATCTTCAGAATCAAAG 60.128 42.308 7.74 0.00 41.88 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.636300 CCAAACTGATTCCAACAAGTCCA 59.364 43.478 0.00 0.00 0.00 4.02
1 2 3.552890 GCCAAACTGATTCCAACAAGTCC 60.553 47.826 0.00 0.00 0.00 3.85
2 3 3.552890 GGCCAAACTGATTCCAACAAGTC 60.553 47.826 0.00 0.00 0.00 3.01
3 4 2.365293 GGCCAAACTGATTCCAACAAGT 59.635 45.455 0.00 0.00 0.00 3.16
4 5 2.289010 GGGCCAAACTGATTCCAACAAG 60.289 50.000 4.39 0.00 0.00 3.16
5 6 1.691434 GGGCCAAACTGATTCCAACAA 59.309 47.619 4.39 0.00 0.00 2.83
6 7 1.337118 GGGCCAAACTGATTCCAACA 58.663 50.000 4.39 0.00 0.00 3.33
7 8 0.608130 GGGGCCAAACTGATTCCAAC 59.392 55.000 4.39 0.00 0.00 3.77
8 9 0.897863 CGGGGCCAAACTGATTCCAA 60.898 55.000 4.39 0.00 0.00 3.53
9 10 1.304052 CGGGGCCAAACTGATTCCA 60.304 57.895 4.39 0.00 0.00 3.53
10 11 1.001393 TCGGGGCCAAACTGATTCC 60.001 57.895 4.39 0.00 0.00 3.01
11 12 0.322546 ACTCGGGGCCAAACTGATTC 60.323 55.000 4.39 0.00 0.00 2.52
12 13 0.609131 CACTCGGGGCCAAACTGATT 60.609 55.000 4.39 0.00 0.00 2.57
13 14 1.002134 CACTCGGGGCCAAACTGAT 60.002 57.895 4.39 0.00 0.00 2.90
14 15 2.429930 CACTCGGGGCCAAACTGA 59.570 61.111 4.39 0.00 0.00 3.41
15 16 2.672996 CCACTCGGGGCCAAACTG 60.673 66.667 4.39 0.00 0.00 3.16
26 27 2.098607 TCTATTACAGAACCGCCACTCG 59.901 50.000 0.00 0.00 38.08 4.18
27 28 3.795623 TCTATTACAGAACCGCCACTC 57.204 47.619 0.00 0.00 0.00 3.51
28 29 4.894114 ACTATCTATTACAGAACCGCCACT 59.106 41.667 0.00 0.00 36.67 4.00
29 30 5.197682 ACTATCTATTACAGAACCGCCAC 57.802 43.478 0.00 0.00 36.67 5.01
30 31 5.864418 AACTATCTATTACAGAACCGCCA 57.136 39.130 0.00 0.00 36.67 5.69
31 32 7.083230 GTCTAACTATCTATTACAGAACCGCC 58.917 42.308 0.00 0.00 36.67 6.13
32 33 7.040548 AGGTCTAACTATCTATTACAGAACCGC 60.041 40.741 0.00 0.00 36.67 5.68
33 34 8.393671 AGGTCTAACTATCTATTACAGAACCG 57.606 38.462 0.00 0.00 36.67 4.44
46 47 9.937175 GCACAAATATTGAAAGGTCTAACTATC 57.063 33.333 0.00 0.00 0.00 2.08
47 48 9.686683 AGCACAAATATTGAAAGGTCTAACTAT 57.313 29.630 0.00 0.00 0.00 2.12
48 49 8.946085 CAGCACAAATATTGAAAGGTCTAACTA 58.054 33.333 0.00 0.00 0.00 2.24
49 50 7.575720 GCAGCACAAATATTGAAAGGTCTAACT 60.576 37.037 0.00 0.00 0.00 2.24
50 51 6.528072 GCAGCACAAATATTGAAAGGTCTAAC 59.472 38.462 0.00 0.00 0.00 2.34
51 52 6.434028 AGCAGCACAAATATTGAAAGGTCTAA 59.566 34.615 0.00 0.00 0.00 2.10
52 53 5.945784 AGCAGCACAAATATTGAAAGGTCTA 59.054 36.000 0.00 0.00 0.00 2.59
53 54 4.768968 AGCAGCACAAATATTGAAAGGTCT 59.231 37.500 0.00 0.00 0.00 3.85
54 55 5.064441 AGCAGCACAAATATTGAAAGGTC 57.936 39.130 0.00 0.00 0.00 3.85
55 56 4.523943 TGAGCAGCACAAATATTGAAAGGT 59.476 37.500 0.00 0.00 0.00 3.50
56 57 5.063180 TGAGCAGCACAAATATTGAAAGG 57.937 39.130 0.00 0.00 0.00 3.11
57 58 5.100259 CCTGAGCAGCACAAATATTGAAAG 58.900 41.667 0.00 0.00 0.00 2.62
58 59 4.523943 ACCTGAGCAGCACAAATATTGAAA 59.476 37.500 0.00 0.00 0.00 2.69
59 60 4.081406 ACCTGAGCAGCACAAATATTGAA 58.919 39.130 0.00 0.00 0.00 2.69
60 61 3.689347 ACCTGAGCAGCACAAATATTGA 58.311 40.909 0.00 0.00 0.00 2.57
61 62 4.445452 AACCTGAGCAGCACAAATATTG 57.555 40.909 0.00 0.00 0.00 1.90
62 63 5.473039 GAAAACCTGAGCAGCACAAATATT 58.527 37.500 0.00 0.00 0.00 1.28
63 64 4.379813 CGAAAACCTGAGCAGCACAAATAT 60.380 41.667 0.00 0.00 0.00 1.28
64 65 3.058293 CGAAAACCTGAGCAGCACAAATA 60.058 43.478 0.00 0.00 0.00 1.40
65 66 2.287788 CGAAAACCTGAGCAGCACAAAT 60.288 45.455 0.00 0.00 0.00 2.32
66 67 1.065401 CGAAAACCTGAGCAGCACAAA 59.935 47.619 0.00 0.00 0.00 2.83
67 68 0.662619 CGAAAACCTGAGCAGCACAA 59.337 50.000 0.00 0.00 0.00 3.33
68 69 1.785041 GCGAAAACCTGAGCAGCACA 61.785 55.000 0.00 0.00 0.00 4.57
69 70 1.081840 GCGAAAACCTGAGCAGCAC 60.082 57.895 0.00 0.00 0.00 4.40
70 71 2.260869 GGCGAAAACCTGAGCAGCA 61.261 57.895 0.00 0.00 0.00 4.41
71 72 1.916697 GAGGCGAAAACCTGAGCAGC 61.917 60.000 0.00 0.00 41.32 5.25
72 73 0.603707 TGAGGCGAAAACCTGAGCAG 60.604 55.000 0.00 0.00 41.32 4.24
73 74 0.036732 ATGAGGCGAAAACCTGAGCA 59.963 50.000 0.00 0.00 41.32 4.26
74 75 0.449388 CATGAGGCGAAAACCTGAGC 59.551 55.000 0.00 0.00 41.32 4.26
75 76 1.089920 CCATGAGGCGAAAACCTGAG 58.910 55.000 0.00 0.00 41.32 3.35
76 77 3.248043 CCATGAGGCGAAAACCTGA 57.752 52.632 0.00 0.00 41.32 3.86
87 88 6.403964 CCGACATTATGATAAATGCCATGAGG 60.404 42.308 0.00 0.00 39.93 3.86
88 89 6.149973 ACCGACATTATGATAAATGCCATGAG 59.850 38.462 0.00 0.00 39.93 2.90
89 90 6.003326 ACCGACATTATGATAAATGCCATGA 58.997 36.000 0.00 0.00 39.93 3.07
90 91 6.072563 TGACCGACATTATGATAAATGCCATG 60.073 38.462 0.00 0.00 39.93 3.66
91 92 6.003326 TGACCGACATTATGATAAATGCCAT 58.997 36.000 0.00 0.00 39.93 4.40
92 93 5.372373 TGACCGACATTATGATAAATGCCA 58.628 37.500 0.00 0.00 39.93 4.92
93 94 5.940192 TGACCGACATTATGATAAATGCC 57.060 39.130 0.00 0.00 39.93 4.40
94 95 7.862372 ACATTTGACCGACATTATGATAAATGC 59.138 33.333 0.00 0.00 39.93 3.56
95 96 9.172820 CACATTTGACCGACATTATGATAAATG 57.827 33.333 0.00 0.00 41.65 2.32
96 97 8.352201 CCACATTTGACCGACATTATGATAAAT 58.648 33.333 0.00 0.00 0.00 1.40
97 98 7.338196 ACCACATTTGACCGACATTATGATAAA 59.662 33.333 0.00 0.00 0.00 1.40
98 99 6.826231 ACCACATTTGACCGACATTATGATAA 59.174 34.615 0.00 0.00 0.00 1.75
99 100 6.259829 CACCACATTTGACCGACATTATGATA 59.740 38.462 0.00 0.00 0.00 2.15
100 101 5.066375 CACCACATTTGACCGACATTATGAT 59.934 40.000 0.00 0.00 0.00 2.45
101 102 4.394610 CACCACATTTGACCGACATTATGA 59.605 41.667 0.00 0.00 0.00 2.15
102 103 4.394610 TCACCACATTTGACCGACATTATG 59.605 41.667 0.00 0.00 0.00 1.90
103 104 4.584874 TCACCACATTTGACCGACATTAT 58.415 39.130 0.00 0.00 0.00 1.28
104 105 4.009370 TCACCACATTTGACCGACATTA 57.991 40.909 0.00 0.00 0.00 1.90
105 106 2.857483 TCACCACATTTGACCGACATT 58.143 42.857 0.00 0.00 0.00 2.71
106 107 2.559698 TCACCACATTTGACCGACAT 57.440 45.000 0.00 0.00 0.00 3.06
107 108 2.333688 TTCACCACATTTGACCGACA 57.666 45.000 0.00 0.00 0.00 4.35
108 109 3.915437 AATTCACCACATTTGACCGAC 57.085 42.857 0.00 0.00 0.00 4.79
109 110 4.582656 AGAAAATTCACCACATTTGACCGA 59.417 37.500 0.00 0.00 0.00 4.69
110 111 4.681025 CAGAAAATTCACCACATTTGACCG 59.319 41.667 0.00 0.00 0.00 4.79
111 112 5.691754 GTCAGAAAATTCACCACATTTGACC 59.308 40.000 0.00 0.00 0.00 4.02
112 113 5.399301 CGTCAGAAAATTCACCACATTTGAC 59.601 40.000 0.00 0.00 0.00 3.18
113 114 5.507149 CCGTCAGAAAATTCACCACATTTGA 60.507 40.000 0.00 0.00 0.00 2.69
114 115 4.681025 CCGTCAGAAAATTCACCACATTTG 59.319 41.667 0.00 0.00 0.00 2.32
115 116 4.340950 ACCGTCAGAAAATTCACCACATTT 59.659 37.500 0.00 0.00 0.00 2.32
116 117 3.888930 ACCGTCAGAAAATTCACCACATT 59.111 39.130 0.00 0.00 0.00 2.71
117 118 3.253188 CACCGTCAGAAAATTCACCACAT 59.747 43.478 0.00 0.00 0.00 3.21
118 119 2.616376 CACCGTCAGAAAATTCACCACA 59.384 45.455 0.00 0.00 0.00 4.17
119 120 2.604614 GCACCGTCAGAAAATTCACCAC 60.605 50.000 0.00 0.00 0.00 4.16
120 121 1.606668 GCACCGTCAGAAAATTCACCA 59.393 47.619 0.00 0.00 0.00 4.17
121 122 1.399727 CGCACCGTCAGAAAATTCACC 60.400 52.381 0.00 0.00 0.00 4.02
122 123 1.263217 ACGCACCGTCAGAAAATTCAC 59.737 47.619 0.00 0.00 33.69 3.18
123 124 1.262950 CACGCACCGTCAGAAAATTCA 59.737 47.619 0.00 0.00 38.32 2.57
124 125 1.529438 TCACGCACCGTCAGAAAATTC 59.471 47.619 0.00 0.00 38.32 2.17
125 126 1.588674 TCACGCACCGTCAGAAAATT 58.411 45.000 0.00 0.00 38.32 1.82
126 127 1.263217 GTTCACGCACCGTCAGAAAAT 59.737 47.619 0.00 0.00 38.32 1.82
127 128 0.653636 GTTCACGCACCGTCAGAAAA 59.346 50.000 0.00 0.00 38.32 2.29
128 129 0.179094 AGTTCACGCACCGTCAGAAA 60.179 50.000 0.00 0.00 38.32 2.52
129 130 0.596600 GAGTTCACGCACCGTCAGAA 60.597 55.000 0.00 0.00 38.32 3.02
130 131 1.007734 GAGTTCACGCACCGTCAGA 60.008 57.895 0.00 0.00 38.32 3.27
131 132 2.365068 CGAGTTCACGCACCGTCAG 61.365 63.158 0.00 0.00 38.32 3.51
132 133 2.354188 CGAGTTCACGCACCGTCA 60.354 61.111 0.00 0.00 38.32 4.35
140 141 1.784525 AGGAGAAAAGCGAGTTCACG 58.215 50.000 0.00 0.00 0.00 4.35
141 142 3.058846 GGAAAGGAGAAAAGCGAGTTCAC 60.059 47.826 0.00 0.00 0.00 3.18
142 143 3.139077 GGAAAGGAGAAAAGCGAGTTCA 58.861 45.455 0.00 0.00 0.00 3.18
143 144 2.484651 GGGAAAGGAGAAAAGCGAGTTC 59.515 50.000 0.00 0.00 0.00 3.01
144 145 2.106684 AGGGAAAGGAGAAAAGCGAGTT 59.893 45.455 0.00 0.00 0.00 3.01
145 146 1.700186 AGGGAAAGGAGAAAAGCGAGT 59.300 47.619 0.00 0.00 0.00 4.18
146 147 2.351455 GAGGGAAAGGAGAAAAGCGAG 58.649 52.381 0.00 0.00 0.00 5.03
147 148 1.003233 GGAGGGAAAGGAGAAAAGCGA 59.997 52.381 0.00 0.00 0.00 4.93
148 149 1.003696 AGGAGGGAAAGGAGAAAAGCG 59.996 52.381 0.00 0.00 0.00 4.68
149 150 2.619332 GGAGGAGGGAAAGGAGAAAAGC 60.619 54.545 0.00 0.00 0.00 3.51
150 151 2.916269 AGGAGGAGGGAAAGGAGAAAAG 59.084 50.000 0.00 0.00 0.00 2.27
151 152 3.005529 AGGAGGAGGGAAAGGAGAAAA 57.994 47.619 0.00 0.00 0.00 2.29
152 153 2.644798 CAAGGAGGAGGGAAAGGAGAAA 59.355 50.000 0.00 0.00 0.00 2.52
153 154 2.158004 TCAAGGAGGAGGGAAAGGAGAA 60.158 50.000 0.00 0.00 0.00 2.87
154 155 1.437149 TCAAGGAGGAGGGAAAGGAGA 59.563 52.381 0.00 0.00 0.00 3.71
155 156 1.958288 TCAAGGAGGAGGGAAAGGAG 58.042 55.000 0.00 0.00 0.00 3.69
156 157 1.985895 GTTCAAGGAGGAGGGAAAGGA 59.014 52.381 0.00 0.00 0.00 3.36
157 158 1.988846 AGTTCAAGGAGGAGGGAAAGG 59.011 52.381 0.00 0.00 0.00 3.11
158 159 3.181439 ACAAGTTCAAGGAGGAGGGAAAG 60.181 47.826 0.00 0.00 0.00 2.62
159 160 2.783510 ACAAGTTCAAGGAGGAGGGAAA 59.216 45.455 0.00 0.00 0.00 3.13
160 161 2.418669 ACAAGTTCAAGGAGGAGGGAA 58.581 47.619 0.00 0.00 0.00 3.97
161 162 2.118403 ACAAGTTCAAGGAGGAGGGA 57.882 50.000 0.00 0.00 0.00 4.20
162 163 2.959465 AACAAGTTCAAGGAGGAGGG 57.041 50.000 0.00 0.00 0.00 4.30
163 164 3.817647 CAGAAACAAGTTCAAGGAGGAGG 59.182 47.826 0.00 0.00 38.86 4.30
164 165 3.817647 CCAGAAACAAGTTCAAGGAGGAG 59.182 47.826 0.00 0.00 38.86 3.69
165 166 3.458118 TCCAGAAACAAGTTCAAGGAGGA 59.542 43.478 0.00 0.00 37.61 3.71
166 167 3.820557 TCCAGAAACAAGTTCAAGGAGG 58.179 45.455 0.00 0.00 37.61 4.30
167 168 4.884164 AGTTCCAGAAACAAGTTCAAGGAG 59.116 41.667 0.00 0.00 41.18 3.69
168 169 4.640201 CAGTTCCAGAAACAAGTTCAAGGA 59.360 41.667 0.00 0.00 40.56 3.36
169 170 4.399303 ACAGTTCCAGAAACAAGTTCAAGG 59.601 41.667 0.00 0.00 40.56 3.61
170 171 5.567138 ACAGTTCCAGAAACAAGTTCAAG 57.433 39.130 0.00 0.00 40.56 3.02
171 172 5.242838 ACAACAGTTCCAGAAACAAGTTCAA 59.757 36.000 0.00 0.00 40.56 2.69
172 173 4.764823 ACAACAGTTCCAGAAACAAGTTCA 59.235 37.500 0.00 0.00 40.56 3.18
173 174 5.310720 ACAACAGTTCCAGAAACAAGTTC 57.689 39.130 0.00 0.00 40.56 3.01
174 175 7.404671 AATACAACAGTTCCAGAAACAAGTT 57.595 32.000 0.00 0.00 40.56 2.66
175 176 7.404671 AAATACAACAGTTCCAGAAACAAGT 57.595 32.000 0.00 0.00 40.56 3.16
176 177 7.914537 GAAATACAACAGTTCCAGAAACAAG 57.085 36.000 0.00 0.00 40.56 3.16
185 186 3.404899 TGGACGGAAATACAACAGTTCC 58.595 45.455 0.00 0.00 45.97 3.62
186 187 5.390613 CAATGGACGGAAATACAACAGTTC 58.609 41.667 0.00 0.00 0.00 3.01
187 188 4.320935 GCAATGGACGGAAATACAACAGTT 60.321 41.667 0.00 0.00 0.00 3.16
188 189 3.190535 GCAATGGACGGAAATACAACAGT 59.809 43.478 0.00 0.00 0.00 3.55
189 190 3.190327 TGCAATGGACGGAAATACAACAG 59.810 43.478 0.00 0.00 0.00 3.16
190 191 3.149981 TGCAATGGACGGAAATACAACA 58.850 40.909 0.00 0.00 0.00 3.33
191 192 3.840890 TGCAATGGACGGAAATACAAC 57.159 42.857 0.00 0.00 0.00 3.32
192 193 4.742417 CATTGCAATGGACGGAAATACAA 58.258 39.130 28.34 0.00 32.78 2.41
193 194 4.368874 CATTGCAATGGACGGAAATACA 57.631 40.909 28.34 0.00 32.78 2.29
205 206 4.550076 TTAACCCCTTTCCATTGCAATG 57.450 40.909 28.91 28.91 36.17 2.82
206 207 4.626046 GCATTAACCCCTTTCCATTGCAAT 60.626 41.667 5.99 5.99 0.00 3.56
207 208 3.307339 GCATTAACCCCTTTCCATTGCAA 60.307 43.478 0.00 0.00 0.00 4.08
208 209 2.235898 GCATTAACCCCTTTCCATTGCA 59.764 45.455 0.00 0.00 0.00 4.08
209 210 2.419990 GGCATTAACCCCTTTCCATTGC 60.420 50.000 0.00 0.00 0.00 3.56
210 211 2.170397 GGGCATTAACCCCTTTCCATTG 59.830 50.000 5.90 0.00 45.00 2.82
211 212 2.477245 GGGCATTAACCCCTTTCCATT 58.523 47.619 5.90 0.00 45.00 3.16
212 213 2.174685 GGGCATTAACCCCTTTCCAT 57.825 50.000 5.90 0.00 45.00 3.41
213 214 3.701800 GGGCATTAACCCCTTTCCA 57.298 52.632 5.90 0.00 45.00 3.53
221 222 3.322369 CTTTTTGAACCGGGCATTAACC 58.678 45.455 6.32 0.00 0.00 2.85
222 223 2.734606 GCTTTTTGAACCGGGCATTAAC 59.265 45.455 6.32 0.00 0.00 2.01
223 224 2.630580 AGCTTTTTGAACCGGGCATTAA 59.369 40.909 6.32 0.00 0.00 1.40
224 225 2.243810 AGCTTTTTGAACCGGGCATTA 58.756 42.857 6.32 0.00 0.00 1.90
225 226 1.047801 AGCTTTTTGAACCGGGCATT 58.952 45.000 6.32 0.00 0.00 3.56
226 227 1.047801 AAGCTTTTTGAACCGGGCAT 58.952 45.000 6.32 0.00 0.00 4.40
227 228 0.103937 CAAGCTTTTTGAACCGGGCA 59.896 50.000 6.32 0.00 0.00 5.36
228 229 1.221466 GCAAGCTTTTTGAACCGGGC 61.221 55.000 6.32 0.00 0.00 6.13
229 230 0.599991 GGCAAGCTTTTTGAACCGGG 60.600 55.000 6.32 0.00 0.00 5.73
230 231 0.599991 GGGCAAGCTTTTTGAACCGG 60.600 55.000 0.00 0.00 0.00 5.28
231 232 0.103937 TGGGCAAGCTTTTTGAACCG 59.896 50.000 0.00 0.00 0.00 4.44
232 233 1.138859 AGTGGGCAAGCTTTTTGAACC 59.861 47.619 0.00 0.00 0.00 3.62
233 234 2.204237 CAGTGGGCAAGCTTTTTGAAC 58.796 47.619 0.00 0.00 0.00 3.18
234 235 1.830477 ACAGTGGGCAAGCTTTTTGAA 59.170 42.857 0.00 0.00 0.00 2.69
235 236 1.136695 CACAGTGGGCAAGCTTTTTGA 59.863 47.619 0.00 0.00 0.00 2.69
236 237 1.134729 ACACAGTGGGCAAGCTTTTTG 60.135 47.619 5.31 0.00 0.00 2.44
237 238 1.136891 GACACAGTGGGCAAGCTTTTT 59.863 47.619 5.31 0.00 0.00 1.94
238 239 0.746659 GACACAGTGGGCAAGCTTTT 59.253 50.000 5.31 0.00 0.00 2.27
239 240 1.109323 GGACACAGTGGGCAAGCTTT 61.109 55.000 5.31 0.00 0.00 3.51
240 241 1.529244 GGACACAGTGGGCAAGCTT 60.529 57.895 5.31 0.00 0.00 3.74
241 242 2.113986 GGACACAGTGGGCAAGCT 59.886 61.111 5.31 0.00 0.00 3.74
242 243 1.391157 TTTGGACACAGTGGGCAAGC 61.391 55.000 5.31 0.00 0.00 4.01
243 244 1.000060 CATTTGGACACAGTGGGCAAG 60.000 52.381 5.31 0.00 0.00 4.01
244 245 1.039068 CATTTGGACACAGTGGGCAA 58.961 50.000 5.31 0.00 0.00 4.52
245 246 0.184692 TCATTTGGACACAGTGGGCA 59.815 50.000 5.31 0.00 0.00 5.36
267 268 3.134081 ACCGGAATAGATCACGGTTGATT 59.866 43.478 9.46 0.00 46.33 2.57
369 370 4.787999 CGTGTCCCGCTTCTAGAC 57.212 61.111 0.00 0.00 0.00 2.59
450 451 3.712881 GGACGTGTGGTTGCGCTC 61.713 66.667 9.73 1.18 0.00 5.03
550 555 2.449345 GAGGTAGAAGAGAGGGAGGGAT 59.551 54.545 0.00 0.00 0.00 3.85
607 612 1.913419 AGAAATGTTTAGGAGGCGGGA 59.087 47.619 0.00 0.00 0.00 5.14
609 614 2.289565 GGAGAAATGTTTAGGAGGCGG 58.710 52.381 0.00 0.00 0.00 6.13
611 616 2.289565 CGGGAGAAATGTTTAGGAGGC 58.710 52.381 0.00 0.00 0.00 4.70
612 617 3.532542 GACGGGAGAAATGTTTAGGAGG 58.467 50.000 0.00 0.00 0.00 4.30
614 619 2.093869 CCGACGGGAGAAATGTTTAGGA 60.094 50.000 5.81 0.00 34.06 2.94
615 620 2.277084 CCGACGGGAGAAATGTTTAGG 58.723 52.381 5.81 0.00 34.06 2.69
616 621 1.664151 GCCGACGGGAGAAATGTTTAG 59.336 52.381 17.22 0.00 34.06 1.85
694 714 0.321653 CAGGGGACAAGAGAAACGGG 60.322 60.000 0.00 0.00 0.00 5.28
705 725 2.747686 GGCGAGAAACAGGGGACA 59.252 61.111 0.00 0.00 0.00 4.02
823 847 1.283793 CTTGTTCTGCAAGCACGGG 59.716 57.895 0.00 0.00 46.68 5.28
866 890 0.467290 TCACCAAGTGGGCAAAGACC 60.467 55.000 1.69 0.00 42.05 3.85
884 908 0.446616 GCGGTGGAAAATTCTCGGTC 59.553 55.000 0.00 0.00 0.00 4.79
887 911 0.179225 CACGCGGTGGAAAATTCTCG 60.179 55.000 12.47 0.00 0.00 4.04
949 973 6.432472 AGAAAGTCTTCAACTGGATTGGATTC 59.568 38.462 0.00 0.00 38.58 2.52
1001 1025 1.064537 CCATGTCCATGTCCATGTCCA 60.065 52.381 16.31 3.22 37.37 4.02
1002 1026 1.212688 TCCATGTCCATGTCCATGTCC 59.787 52.381 16.31 0.00 37.37 4.02
1003 1027 2.569059 CTCCATGTCCATGTCCATGTC 58.431 52.381 16.31 0.85 37.37 3.06
1004 1028 1.213678 CCTCCATGTCCATGTCCATGT 59.786 52.381 16.31 0.00 37.37 3.21
1005 1029 1.478105 CCCTCCATGTCCATGTCCATG 60.478 57.143 12.58 12.58 38.51 3.66
1006 1030 0.848735 CCCTCCATGTCCATGTCCAT 59.151 55.000 6.53 0.00 37.11 3.41
1221 1245 3.634202 AGCTGCCGGATGAAGCTA 58.366 55.556 16.75 0.00 45.26 3.32
1257 1281 1.407437 GGTTGAAGCGATGGAGTGGAT 60.407 52.381 0.00 0.00 0.00 3.41
1268 1292 1.602377 ACGGAAAAAGAGGTTGAAGCG 59.398 47.619 0.00 0.00 0.00 4.68
1269 1293 3.710326 AACGGAAAAAGAGGTTGAAGC 57.290 42.857 0.00 0.00 0.00 3.86
1270 1294 4.097286 TGGAAACGGAAAAAGAGGTTGAAG 59.903 41.667 0.00 0.00 0.00 3.02
1272 1296 3.622630 TGGAAACGGAAAAAGAGGTTGA 58.377 40.909 0.00 0.00 0.00 3.18
1273 1297 4.379339 TTGGAAACGGAAAAAGAGGTTG 57.621 40.909 0.00 0.00 0.00 3.77
1274 1298 4.464951 ACTTTGGAAACGGAAAAAGAGGTT 59.535 37.500 0.00 0.00 34.47 3.50
1275 1299 4.021229 ACTTTGGAAACGGAAAAAGAGGT 58.979 39.130 0.00 0.00 34.47 3.85
1276 1300 4.499188 GGACTTTGGAAACGGAAAAAGAGG 60.499 45.833 0.00 0.00 34.47 3.69
1278 1302 4.017808 TGGACTTTGGAAACGGAAAAAGA 58.982 39.130 0.00 0.00 34.47 2.52
1280 1304 4.803098 TTGGACTTTGGAAACGGAAAAA 57.197 36.364 0.00 0.00 0.00 1.94
1281 1305 4.498345 CGATTGGACTTTGGAAACGGAAAA 60.498 41.667 0.00 0.00 0.00 2.29
1282 1306 3.003897 CGATTGGACTTTGGAAACGGAAA 59.996 43.478 0.00 0.00 0.00 3.13
1284 1308 2.147958 CGATTGGACTTTGGAAACGGA 58.852 47.619 0.00 0.00 0.00 4.69
1285 1309 1.877443 ACGATTGGACTTTGGAAACGG 59.123 47.619 0.00 0.00 0.00 4.44
1286 1310 3.296628 CAACGATTGGACTTTGGAAACG 58.703 45.455 0.00 0.00 0.00 3.60
1287 1311 3.049912 GCAACGATTGGACTTTGGAAAC 58.950 45.455 0.00 0.00 0.00 2.78
1289 1313 2.302260 TGCAACGATTGGACTTTGGAA 58.698 42.857 0.00 0.00 0.00 3.53
1291 1315 3.758300 GTATGCAACGATTGGACTTTGG 58.242 45.455 0.00 0.00 32.41 3.28
1304 1328 1.727857 CGGAAGCAAACCGTATGCAAC 60.728 52.381 0.00 0.00 46.22 4.17
1314 1338 2.487762 TCATGGATGAACGGAAGCAAAC 59.512 45.455 0.00 0.00 33.08 2.93
1316 1340 2.083774 GTCATGGATGAACGGAAGCAA 58.916 47.619 0.00 0.00 38.75 3.91
1317 1341 1.737838 GTCATGGATGAACGGAAGCA 58.262 50.000 0.00 0.00 38.75 3.91
1318 1342 0.652592 CGTCATGGATGAACGGAAGC 59.347 55.000 0.00 0.00 38.75 3.86
1319 1343 2.010145 ACGTCATGGATGAACGGAAG 57.990 50.000 8.51 0.00 38.75 3.46
1320 1344 2.465860 AACGTCATGGATGAACGGAA 57.534 45.000 8.51 0.00 38.75 4.30
1321 1345 2.465860 AAACGTCATGGATGAACGGA 57.534 45.000 8.51 0.00 38.75 4.69
1322 1346 2.482336 TGAAAACGTCATGGATGAACGG 59.518 45.455 8.51 1.41 38.75 4.44
1323 1347 3.186409 AGTGAAAACGTCATGGATGAACG 59.814 43.478 2.65 2.65 38.90 3.95
1324 1348 4.749245 AGTGAAAACGTCATGGATGAAC 57.251 40.909 0.00 0.00 38.90 3.18
1325 1349 5.301555 TGTAGTGAAAACGTCATGGATGAA 58.698 37.500 0.00 0.00 38.90 2.57
1326 1350 4.888917 TGTAGTGAAAACGTCATGGATGA 58.111 39.130 0.00 0.00 38.90 2.92
1327 1351 5.351189 TCATGTAGTGAAAACGTCATGGATG 59.649 40.000 9.02 0.00 38.90 3.51
1328 1352 5.487433 TCATGTAGTGAAAACGTCATGGAT 58.513 37.500 9.02 0.00 38.90 3.41
1329 1353 4.888917 TCATGTAGTGAAAACGTCATGGA 58.111 39.130 9.02 0.00 38.90 3.41
1330 1354 5.801350 ATCATGTAGTGAAAACGTCATGG 57.199 39.130 9.02 0.00 40.97 3.66
1331 1355 6.894517 CGTAATCATGTAGTGAAAACGTCATG 59.105 38.462 0.00 0.00 40.89 3.07
1332 1356 6.035650 CCGTAATCATGTAGTGAAAACGTCAT 59.964 38.462 0.00 0.00 42.64 3.06
1333 1357 5.346551 CCGTAATCATGTAGTGAAAACGTCA 59.653 40.000 0.00 0.00 42.64 4.35
1334 1358 5.574055 TCCGTAATCATGTAGTGAAAACGTC 59.426 40.000 0.00 0.00 42.64 4.34
1335 1359 5.472148 TCCGTAATCATGTAGTGAAAACGT 58.528 37.500 11.75 0.00 42.64 3.99
1336 1360 6.035650 ACATCCGTAATCATGTAGTGAAAACG 59.964 38.462 0.00 7.92 43.24 3.60
1337 1361 7.303634 ACATCCGTAATCATGTAGTGAAAAC 57.696 36.000 0.00 0.00 40.97 2.43
1341 1365 9.908152 CTTTATACATCCGTAATCATGTAGTGA 57.092 33.333 0.00 0.00 38.56 3.41
1342 1366 9.908152 TCTTTATACATCCGTAATCATGTAGTG 57.092 33.333 0.00 0.00 38.56 2.74
1343 1367 9.909644 GTCTTTATACATCCGTAATCATGTAGT 57.090 33.333 0.00 0.00 38.56 2.73
1344 1368 9.908152 TGTCTTTATACATCCGTAATCATGTAG 57.092 33.333 0.00 0.00 38.56 2.74
1376 1400 9.817809 AGCAAAATGAACGAATCTATACTCTAA 57.182 29.630 0.00 0.00 0.00 2.10
1377 1401 9.817809 AAGCAAAATGAACGAATCTATACTCTA 57.182 29.630 0.00 0.00 0.00 2.43
1378 1402 8.723942 AAGCAAAATGAACGAATCTATACTCT 57.276 30.769 0.00 0.00 0.00 3.24
1379 1403 7.789759 CGAAGCAAAATGAACGAATCTATACTC 59.210 37.037 0.00 0.00 0.00 2.59
1380 1404 7.277981 ACGAAGCAAAATGAACGAATCTATACT 59.722 33.333 0.00 0.00 0.00 2.12
1381 1405 7.399523 ACGAAGCAAAATGAACGAATCTATAC 58.600 34.615 0.00 0.00 0.00 1.47
1382 1406 7.534085 ACGAAGCAAAATGAACGAATCTATA 57.466 32.000 0.00 0.00 0.00 1.31
1383 1407 6.422776 ACGAAGCAAAATGAACGAATCTAT 57.577 33.333 0.00 0.00 0.00 1.98
1384 1408 5.856126 ACGAAGCAAAATGAACGAATCTA 57.144 34.783 0.00 0.00 0.00 1.98
1385 1409 4.749245 ACGAAGCAAAATGAACGAATCT 57.251 36.364 0.00 0.00 0.00 2.40
1386 1410 6.021596 ACATACGAAGCAAAATGAACGAATC 58.978 36.000 0.00 0.00 0.00 2.52
1387 1411 5.938322 ACATACGAAGCAAAATGAACGAAT 58.062 33.333 0.00 0.00 0.00 3.34
1388 1412 5.351233 ACATACGAAGCAAAATGAACGAA 57.649 34.783 0.00 0.00 0.00 3.85
1389 1413 5.636121 ACTACATACGAAGCAAAATGAACGA 59.364 36.000 0.00 0.00 0.00 3.85
1390 1414 5.854157 ACTACATACGAAGCAAAATGAACG 58.146 37.500 0.00 0.00 0.00 3.95
1391 1415 6.248631 GGACTACATACGAAGCAAAATGAAC 58.751 40.000 0.00 0.00 0.00 3.18
1392 1416 5.062934 CGGACTACATACGAAGCAAAATGAA 59.937 40.000 0.00 0.00 0.00 2.57
1393 1417 4.565166 CGGACTACATACGAAGCAAAATGA 59.435 41.667 0.00 0.00 0.00 2.57
1394 1418 4.328983 ACGGACTACATACGAAGCAAAATG 59.671 41.667 0.00 0.00 0.00 2.32
1395 1419 4.501071 ACGGACTACATACGAAGCAAAAT 58.499 39.130 0.00 0.00 0.00 1.82
1396 1420 3.916761 ACGGACTACATACGAAGCAAAA 58.083 40.909 0.00 0.00 0.00 2.44
1397 1421 3.581024 ACGGACTACATACGAAGCAAA 57.419 42.857 0.00 0.00 0.00 3.68
1398 1422 4.906065 ATACGGACTACATACGAAGCAA 57.094 40.909 0.00 0.00 0.00 3.91
1399 1423 4.336153 TCAATACGGACTACATACGAAGCA 59.664 41.667 0.00 0.00 0.00 3.91
1400 1424 4.852138 TCAATACGGACTACATACGAAGC 58.148 43.478 0.00 0.00 0.00 3.86
1401 1425 6.197842 GGTTTCAATACGGACTACATACGAAG 59.802 42.308 0.00 0.00 0.00 3.79
1402 1426 6.035843 GGTTTCAATACGGACTACATACGAA 58.964 40.000 0.00 0.00 0.00 3.85
1403 1427 5.357878 AGGTTTCAATACGGACTACATACGA 59.642 40.000 0.00 0.00 0.00 3.43
1404 1428 5.585390 AGGTTTCAATACGGACTACATACG 58.415 41.667 0.00 0.00 0.00 3.06
1405 1429 6.803642 AGAGGTTTCAATACGGACTACATAC 58.196 40.000 0.00 0.00 0.00 2.39
1406 1430 8.523915 TTAGAGGTTTCAATACGGACTACATA 57.476 34.615 0.00 0.00 0.00 2.29
1407 1431 5.934402 AGAGGTTTCAATACGGACTACAT 57.066 39.130 0.00 0.00 0.00 2.29
1408 1432 6.839124 TTAGAGGTTTCAATACGGACTACA 57.161 37.500 0.00 0.00 0.00 2.74
1409 1433 8.538409 TTTTTAGAGGTTTCAATACGGACTAC 57.462 34.615 0.00 0.00 0.00 2.73
1410 1434 8.587608 TCTTTTTAGAGGTTTCAATACGGACTA 58.412 33.333 0.00 0.00 0.00 2.59
1411 1435 7.387122 GTCTTTTTAGAGGTTTCAATACGGACT 59.613 37.037 0.00 0.00 0.00 3.85
1412 1436 7.387122 AGTCTTTTTAGAGGTTTCAATACGGAC 59.613 37.037 0.00 0.00 0.00 4.79
1413 1437 7.447594 AGTCTTTTTAGAGGTTTCAATACGGA 58.552 34.615 0.00 0.00 0.00 4.69
1414 1438 7.668525 AGTCTTTTTAGAGGTTTCAATACGG 57.331 36.000 0.00 0.00 0.00 4.02
1463 1487 9.436957 AGTACGTCACAAGAAAATTATCAAGAT 57.563 29.630 0.00 0.00 0.00 2.40
1464 1488 8.708742 CAGTACGTCACAAGAAAATTATCAAGA 58.291 33.333 0.00 0.00 0.00 3.02
1465 1489 8.708742 TCAGTACGTCACAAGAAAATTATCAAG 58.291 33.333 0.00 0.00 0.00 3.02
1466 1490 8.596271 TCAGTACGTCACAAGAAAATTATCAA 57.404 30.769 0.00 0.00 0.00 2.57
1467 1491 8.771920 ATCAGTACGTCACAAGAAAATTATCA 57.228 30.769 0.00 0.00 0.00 2.15
1471 1495 7.259290 ACAATCAGTACGTCACAAGAAAATT 57.741 32.000 0.00 0.00 0.00 1.82
1472 1496 6.861065 ACAATCAGTACGTCACAAGAAAAT 57.139 33.333 0.00 0.00 0.00 1.82
1474 1498 5.813157 TCAACAATCAGTACGTCACAAGAAA 59.187 36.000 0.00 0.00 0.00 2.52
1479 1503 5.755861 TGAAATCAACAATCAGTACGTCACA 59.244 36.000 0.00 0.00 0.00 3.58
1480 1504 6.223138 TGAAATCAACAATCAGTACGTCAC 57.777 37.500 0.00 0.00 0.00 3.67
1481 1505 7.433708 AATGAAATCAACAATCAGTACGTCA 57.566 32.000 0.00 0.00 0.00 4.35
1482 1506 7.803189 ACAAATGAAATCAACAATCAGTACGTC 59.197 33.333 0.00 0.00 0.00 4.34
1483 1507 7.648142 ACAAATGAAATCAACAATCAGTACGT 58.352 30.769 0.00 0.00 0.00 3.57
1487 1511 8.945481 TCAAACAAATGAAATCAACAATCAGT 57.055 26.923 0.00 0.00 0.00 3.41
1490 1514 8.702438 ACGATCAAACAAATGAAATCAACAATC 58.298 29.630 0.00 0.00 32.06 2.67
1493 1517 7.424803 AGACGATCAAACAAATGAAATCAACA 58.575 30.769 0.00 0.00 32.06 3.33
1494 1518 7.591057 TGAGACGATCAAACAAATGAAATCAAC 59.409 33.333 0.00 0.00 34.02 3.18
1495 1519 7.647228 TGAGACGATCAAACAAATGAAATCAA 58.353 30.769 0.00 0.00 34.02 2.57
1505 1529 3.485463 AACCCTGAGACGATCAAACAA 57.515 42.857 0.00 0.00 37.52 2.83
1508 1532 2.611971 CGGAAACCCTGAGACGATCAAA 60.612 50.000 0.00 0.00 37.52 2.69
1509 1533 1.067142 CGGAAACCCTGAGACGATCAA 60.067 52.381 0.00 0.00 37.52 2.57
1510 1534 0.530744 CGGAAACCCTGAGACGATCA 59.469 55.000 0.00 0.00 36.21 2.92
1511 1535 0.179108 CCGGAAACCCTGAGACGATC 60.179 60.000 0.00 0.00 0.00 3.69
1512 1536 0.613853 TCCGGAAACCCTGAGACGAT 60.614 55.000 0.00 0.00 0.00 3.73
1513 1537 0.828762 TTCCGGAAACCCTGAGACGA 60.829 55.000 16.28 0.00 0.00 4.20
1514 1538 0.389948 CTTCCGGAAACCCTGAGACG 60.390 60.000 19.39 0.00 0.00 4.18
1515 1539 0.974383 TCTTCCGGAAACCCTGAGAC 59.026 55.000 19.39 0.00 0.00 3.36
1596 1620 2.750888 GCGCCGGTGGATGTTCTTC 61.751 63.158 18.41 0.00 0.00 2.87
1848 1872 1.189752 GTCTCCTCTGCTGGATGTCA 58.810 55.000 0.00 0.00 35.30 3.58
1853 1877 2.363018 CCCGTCTCCTCTGCTGGA 60.363 66.667 0.00 0.00 34.52 3.86
1874 1898 2.045926 GCTGCCCTGGATGAACGT 60.046 61.111 0.00 0.00 0.00 3.99
1917 1944 3.328931 TCCTCTTCTTGCTGAAATGGTCT 59.671 43.478 0.00 0.00 33.79 3.85
1985 2024 4.598894 CCCGCAGATGCTCCTCGG 62.599 72.222 2.95 0.00 39.32 4.63
1991 2030 4.827087 CAGTCGCCCGCAGATGCT 62.827 66.667 2.95 0.00 39.32 3.79
2006 2048 4.742201 CCGGCGTCTCACCACCAG 62.742 72.222 6.01 0.00 0.00 4.00
2107 2149 1.134670 GTCTTCAGAGGGCGCATAGTT 60.135 52.381 10.83 0.00 0.00 2.24
2132 2177 1.446792 GAAGCAGTAGCAGCGCTGA 60.447 57.895 40.21 18.77 45.49 4.26
2135 2180 3.088044 CAGAAGCAGTAGCAGCGC 58.912 61.111 0.00 0.00 45.49 5.92
2139 2184 1.943046 GCAGAAGCAGAAGCAGTAGCA 60.943 52.381 0.00 0.00 45.49 3.49
2142 2187 1.943046 GCAGCAGAAGCAGAAGCAGTA 60.943 52.381 0.00 0.00 45.49 2.74
2143 2188 1.235948 GCAGCAGAAGCAGAAGCAGT 61.236 55.000 0.00 0.00 45.49 4.40
2145 2190 1.228033 TGCAGCAGAAGCAGAAGCA 60.228 52.632 0.00 0.00 45.49 3.91
2146 2191 1.209640 GTGCAGCAGAAGCAGAAGC 59.790 57.895 0.00 0.00 43.63 3.86
2147 2192 1.584380 GGGTGCAGCAGAAGCAGAAG 61.584 60.000 19.06 0.00 43.63 2.85
2148 2193 1.601759 GGGTGCAGCAGAAGCAGAA 60.602 57.895 19.06 0.00 43.63 3.02
2149 2194 2.033141 GGGTGCAGCAGAAGCAGA 59.967 61.111 19.06 0.00 43.63 4.26
2150 2195 2.281970 TGGGTGCAGCAGAAGCAG 60.282 61.111 19.06 0.00 43.63 4.24
2151 2196 2.281970 CTGGGTGCAGCAGAAGCA 60.282 61.111 19.06 4.91 45.49 3.91
2152 2197 3.745803 GCTGGGTGCAGCAGAAGC 61.746 66.667 19.06 18.32 46.73 3.86
2172 2220 0.250166 CTGCATGAGCCGGATCATCA 60.250 55.000 31.58 26.84 37.84 3.07
2201 2249 2.743718 CGGTCTCCACTGGTGCTT 59.256 61.111 0.00 0.00 0.00 3.91
2224 2272 1.734465 CGGTGAAGTTGGCTGAAGATC 59.266 52.381 0.00 0.00 0.00 2.75
2235 2283 0.247736 CTGCTAGCTCCGGTGAAGTT 59.752 55.000 17.23 0.00 0.00 2.66
2236 2284 0.612174 TCTGCTAGCTCCGGTGAAGT 60.612 55.000 17.23 0.00 0.00 3.01
2268 2316 0.321919 GCATTGGACTCTGGACAGCA 60.322 55.000 0.00 0.00 0.00 4.41
2307 2355 2.157668 CGTTGTATTGCGCTTGTCTTCT 59.842 45.455 9.73 0.00 0.00 2.85
2401 2449 1.003355 CGGCCTGTTCATGTGGAGT 60.003 57.895 0.00 0.00 0.00 3.85
2403 2451 1.302431 CACGGCCTGTTCATGTGGA 60.302 57.895 0.00 0.00 0.00 4.02
2404 2452 2.334946 CCACGGCCTGTTCATGTGG 61.335 63.158 9.01 9.01 43.55 4.17
2405 2453 2.981560 GCCACGGCCTGTTCATGTG 61.982 63.158 0.00 0.00 34.56 3.21
2406 2454 2.672996 GCCACGGCCTGTTCATGT 60.673 61.111 0.00 0.00 34.56 3.21
2451 2511 3.112709 GGCTTCGGCGTGTCTGTC 61.113 66.667 6.85 0.00 42.91 3.51
2463 2523 4.189188 TCGACGGCTAGCGGCTTC 62.189 66.667 21.08 11.68 41.46 3.86
2504 2564 1.834263 AGTCTAGGCCCATCTTCACAC 59.166 52.381 0.00 0.00 0.00 3.82
2513 2573 0.687757 CCAGTAGCAGTCTAGGCCCA 60.688 60.000 0.00 0.00 0.00 5.36
2514 2574 0.688087 ACCAGTAGCAGTCTAGGCCC 60.688 60.000 0.00 0.00 0.00 5.80
2544 2604 3.674955 CGGTGATCTGGTCGACATTGTTA 60.675 47.826 18.91 0.00 0.00 2.41
2553 2613 1.226802 CTGCTCGGTGATCTGGTCG 60.227 63.158 0.00 0.00 0.00 4.79
2556 2616 0.249784 CCATCTGCTCGGTGATCTGG 60.250 60.000 0.00 0.00 0.00 3.86
2592 2652 0.617413 CCAGCCATCAGGTCTTCTGT 59.383 55.000 0.00 0.00 43.76 3.41
2634 2694 4.259356 GGAGTATAATTTACGGATGGGCC 58.741 47.826 0.00 0.00 0.00 5.80
2642 2702 5.919141 CGGAACAGAGGGAGTATAATTTACG 59.081 44.000 0.00 0.00 0.00 3.18
2653 2713 4.184629 CAAGTAATTCGGAACAGAGGGAG 58.815 47.826 0.00 0.00 0.00 4.30
2654 2714 3.581332 ACAAGTAATTCGGAACAGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
2655 2715 3.933332 GACAAGTAATTCGGAACAGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
2656 2716 4.822026 AGACAAGTAATTCGGAACAGAGG 58.178 43.478 0.00 0.00 0.00 3.69
2657 2717 4.559251 CGAGACAAGTAATTCGGAACAGAG 59.441 45.833 0.00 0.00 0.00 3.35
2658 2718 4.482386 CGAGACAAGTAATTCGGAACAGA 58.518 43.478 0.00 0.00 0.00 3.41
2659 2719 4.824848 CGAGACAAGTAATTCGGAACAG 57.175 45.455 0.00 0.00 0.00 3.16
2665 2725 5.769367 TCCATATCCGAGACAAGTAATTCG 58.231 41.667 0.00 0.00 0.00 3.34
2666 2726 7.155328 ACATCCATATCCGAGACAAGTAATTC 58.845 38.462 0.00 0.00 0.00 2.17
2667 2727 7.067496 ACATCCATATCCGAGACAAGTAATT 57.933 36.000 0.00 0.00 0.00 1.40
2668 2728 6.672266 ACATCCATATCCGAGACAAGTAAT 57.328 37.500 0.00 0.00 0.00 1.89
2669 2729 7.670140 AGATACATCCATATCCGAGACAAGTAA 59.330 37.037 0.00 0.00 32.76 2.24
2670 2730 7.175797 AGATACATCCATATCCGAGACAAGTA 58.824 38.462 0.00 0.00 32.76 2.24
2671 2731 6.013379 AGATACATCCATATCCGAGACAAGT 58.987 40.000 0.00 0.00 32.76 3.16
2672 2732 6.522625 AGATACATCCATATCCGAGACAAG 57.477 41.667 0.00 0.00 32.76 3.16
2673 2733 7.402862 TCTAGATACATCCATATCCGAGACAA 58.597 38.462 0.00 0.00 32.76 3.18
2674 2734 6.958767 TCTAGATACATCCATATCCGAGACA 58.041 40.000 0.00 0.00 32.76 3.41
2675 2735 7.554835 AGTTCTAGATACATCCATATCCGAGAC 59.445 40.741 0.00 0.00 32.76 3.36
2676 2736 7.634718 AGTTCTAGATACATCCATATCCGAGA 58.365 38.462 0.00 0.00 32.76 4.04
2677 2737 7.873719 AGTTCTAGATACATCCATATCCGAG 57.126 40.000 0.00 0.00 32.76 4.63
2678 2738 9.175312 GTTAGTTCTAGATACATCCATATCCGA 57.825 37.037 0.00 0.00 32.76 4.55
2679 2739 8.957466 TGTTAGTTCTAGATACATCCATATCCG 58.043 37.037 0.00 0.00 32.76 4.18
2706 2766 9.734984 TCGTAGAAATGGATGTATCTAGATGTA 57.265 33.333 15.79 4.44 0.00 2.29
2707 2767 8.516234 GTCGTAGAAATGGATGTATCTAGATGT 58.484 37.037 15.79 1.25 39.69 3.06
2708 2768 8.515414 TGTCGTAGAAATGGATGTATCTAGATG 58.485 37.037 15.79 0.00 39.69 2.90
2709 2769 8.637196 TGTCGTAGAAATGGATGTATCTAGAT 57.363 34.615 10.73 10.73 39.69 1.98
2710 2770 8.459911 TTGTCGTAGAAATGGATGTATCTAGA 57.540 34.615 0.00 0.00 39.69 2.43
2711 2771 8.353684 ACTTGTCGTAGAAATGGATGTATCTAG 58.646 37.037 0.00 0.00 39.69 2.43
2712 2772 8.234136 ACTTGTCGTAGAAATGGATGTATCTA 57.766 34.615 0.00 0.00 39.69 1.98
2713 2773 7.113658 ACTTGTCGTAGAAATGGATGTATCT 57.886 36.000 0.00 0.00 39.69 1.98
2714 2774 8.867112 TTACTTGTCGTAGAAATGGATGTATC 57.133 34.615 0.00 0.00 39.69 2.24
2715 2775 9.832445 AATTACTTGTCGTAGAAATGGATGTAT 57.168 29.630 0.00 0.00 39.69 2.29
2716 2776 9.309516 GAATTACTTGTCGTAGAAATGGATGTA 57.690 33.333 0.00 0.00 39.69 2.29
2717 2777 7.280205 GGAATTACTTGTCGTAGAAATGGATGT 59.720 37.037 0.00 0.00 39.69 3.06
2718 2778 7.516785 CGGAATTACTTGTCGTAGAAATGGATG 60.517 40.741 0.00 0.00 39.69 3.51
2719 2779 6.479001 CGGAATTACTTGTCGTAGAAATGGAT 59.521 38.462 0.00 0.00 39.69 3.41
2720 2780 5.808540 CGGAATTACTTGTCGTAGAAATGGA 59.191 40.000 0.00 0.00 39.69 3.41
2721 2781 5.808540 TCGGAATTACTTGTCGTAGAAATGG 59.191 40.000 0.00 0.00 39.69 3.16
2722 2782 6.880822 TCGGAATTACTTGTCGTAGAAATG 57.119 37.500 0.00 0.00 39.69 2.32
2723 2783 6.869913 TGTTCGGAATTACTTGTCGTAGAAAT 59.130 34.615 0.00 0.00 39.69 2.17
2724 2784 6.215121 TGTTCGGAATTACTTGTCGTAGAAA 58.785 36.000 0.00 0.00 39.69 2.52
2725 2785 5.771469 TGTTCGGAATTACTTGTCGTAGAA 58.229 37.500 0.00 0.00 39.69 2.10
2726 2786 5.375417 TGTTCGGAATTACTTGTCGTAGA 57.625 39.130 0.00 0.00 0.00 2.59
2727 2787 6.400727 CCTTTGTTCGGAATTACTTGTCGTAG 60.401 42.308 0.00 0.00 0.00 3.51
2728 2788 5.406175 CCTTTGTTCGGAATTACTTGTCGTA 59.594 40.000 0.00 0.00 0.00 3.43
2729 2789 4.212636 CCTTTGTTCGGAATTACTTGTCGT 59.787 41.667 0.00 0.00 0.00 4.34
2730 2790 4.449743 TCCTTTGTTCGGAATTACTTGTCG 59.550 41.667 0.00 0.00 0.00 4.35
2731 2791 5.934935 TCCTTTGTTCGGAATTACTTGTC 57.065 39.130 0.00 0.00 0.00 3.18
2732 2792 5.826208 ACTTCCTTTGTTCGGAATTACTTGT 59.174 36.000 0.00 0.00 39.64 3.16
2733 2793 6.313744 ACTTCCTTTGTTCGGAATTACTTG 57.686 37.500 0.00 0.00 39.64 3.16
2734 2794 7.222161 ACTACTTCCTTTGTTCGGAATTACTT 58.778 34.615 0.00 0.00 39.64 2.24
2735 2795 6.766429 ACTACTTCCTTTGTTCGGAATTACT 58.234 36.000 0.00 0.00 39.64 2.24
2736 2796 7.430992 AACTACTTCCTTTGTTCGGAATTAC 57.569 36.000 0.00 0.00 39.64 1.89
2737 2797 9.211485 CTAAACTACTTCCTTTGTTCGGAATTA 57.789 33.333 0.00 0.00 39.64 1.40
2738 2798 6.954487 AAACTACTTCCTTTGTTCGGAATT 57.046 33.333 0.00 0.00 39.64 2.17
2739 2799 6.148976 GCTAAACTACTTCCTTTGTTCGGAAT 59.851 38.462 0.00 0.00 39.64 3.01
2740 2800 5.467735 GCTAAACTACTTCCTTTGTTCGGAA 59.532 40.000 0.00 0.00 38.18 4.30
2741 2801 4.992951 GCTAAACTACTTCCTTTGTTCGGA 59.007 41.667 0.00 0.00 0.00 4.55
2742 2802 4.153655 GGCTAAACTACTTCCTTTGTTCGG 59.846 45.833 0.00 0.00 0.00 4.30
2743 2803 4.153655 GGGCTAAACTACTTCCTTTGTTCG 59.846 45.833 0.00 0.00 0.00 3.95
2744 2804 4.153655 CGGGCTAAACTACTTCCTTTGTTC 59.846 45.833 0.00 0.00 0.00 3.18
2745 2805 4.070009 CGGGCTAAACTACTTCCTTTGTT 58.930 43.478 0.00 0.00 0.00 2.83
2746 2806 3.072038 ACGGGCTAAACTACTTCCTTTGT 59.928 43.478 0.00 0.00 0.00 2.83
2747 2807 3.671716 ACGGGCTAAACTACTTCCTTTG 58.328 45.455 0.00 0.00 0.00 2.77
2748 2808 3.581770 AGACGGGCTAAACTACTTCCTTT 59.418 43.478 0.00 0.00 0.00 3.11
2749 2809 3.171528 AGACGGGCTAAACTACTTCCTT 58.828 45.455 0.00 0.00 0.00 3.36
2750 2810 2.759535 GAGACGGGCTAAACTACTTCCT 59.240 50.000 0.00 0.00 0.00 3.36
2751 2811 2.479219 CGAGACGGGCTAAACTACTTCC 60.479 54.545 0.00 0.00 0.00 3.46
2752 2812 2.795117 CGAGACGGGCTAAACTACTTC 58.205 52.381 0.00 0.00 0.00 3.01
2753 2813 1.135170 GCGAGACGGGCTAAACTACTT 60.135 52.381 0.00 0.00 0.00 2.24
2754 2814 0.455005 GCGAGACGGGCTAAACTACT 59.545 55.000 0.00 0.00 0.00 2.57
2755 2815 0.171903 TGCGAGACGGGCTAAACTAC 59.828 55.000 0.00 0.00 0.00 2.73
2756 2816 1.108776 ATGCGAGACGGGCTAAACTA 58.891 50.000 0.00 0.00 0.00 2.24
2757 2817 0.460284 CATGCGAGACGGGCTAAACT 60.460 55.000 0.00 0.00 0.00 2.66
2772 2837 3.397482 CTTGTAGAGTATGAGGGCATGC 58.603 50.000 9.90 9.90 37.38 4.06
2814 2880 4.092675 GTGACGAGGAGCTATATACCGTAC 59.907 50.000 0.00 0.00 0.00 3.67
2816 2882 3.072944 GTGACGAGGAGCTATATACCGT 58.927 50.000 0.00 0.00 0.00 4.83
2817 2883 3.072211 TGTGACGAGGAGCTATATACCG 58.928 50.000 0.00 0.00 0.00 4.02
2818 2884 3.819337 TGTGTGACGAGGAGCTATATACC 59.181 47.826 0.00 0.00 0.00 2.73
2843 2912 7.044314 GGCGACTAATAATTTACAAATGTGCAC 60.044 37.037 10.75 10.75 0.00 4.57
2846 2915 8.903570 TTGGCGACTAATAATTTACAAATGTG 57.096 30.769 0.00 0.00 0.00 3.21
2863 2932 5.938125 ACTACAAAATTGTATCTTGGCGACT 59.062 36.000 6.47 0.00 42.26 4.18
2865 2934 6.874664 TGTACTACAAAATTGTATCTTGGCGA 59.125 34.615 6.47 0.00 42.26 5.54
2866 2935 7.067532 TGTACTACAAAATTGTATCTTGGCG 57.932 36.000 6.47 0.00 42.26 5.69
2868 2937 7.962918 GCACTGTACTACAAAATTGTATCTTGG 59.037 37.037 6.47 0.00 42.26 3.61
2869 2938 7.962918 GGCACTGTACTACAAAATTGTATCTTG 59.037 37.037 6.47 0.00 42.26 3.02
2888 2957 1.069765 CGACAAGTCAGGGCACTGT 59.930 57.895 17.28 0.00 45.14 3.55
2905 2974 2.665519 GCAGGAACAAAGCATACACACG 60.666 50.000 0.00 0.00 0.00 4.49
2918 2987 6.069673 TCAGGGAGATTATTTTAGCAGGAACA 60.070 38.462 0.00 0.00 0.00 3.18
2929 3013 3.689649 GCACAACGTCAGGGAGATTATTT 59.310 43.478 0.00 0.00 0.00 1.40
2932 3016 1.403647 CGCACAACGTCAGGGAGATTA 60.404 52.381 0.00 0.00 36.87 1.75
2933 3017 0.670546 CGCACAACGTCAGGGAGATT 60.671 55.000 0.00 0.00 36.87 2.40
2934 3018 1.079819 CGCACAACGTCAGGGAGAT 60.080 57.895 0.00 0.00 36.87 2.75
2935 3019 2.338620 CGCACAACGTCAGGGAGA 59.661 61.111 0.00 0.00 36.87 3.71
2936 3020 2.738521 CCGCACAACGTCAGGGAG 60.739 66.667 0.00 0.00 41.42 4.30
2937 3021 4.980805 GCCGCACAACGTCAGGGA 62.981 66.667 0.00 0.00 41.42 4.20
2938 3022 4.988598 AGCCGCACAACGTCAGGG 62.989 66.667 0.00 0.00 41.42 4.45
2939 3023 3.716006 CAGCCGCACAACGTCAGG 61.716 66.667 0.00 0.00 41.42 3.86
2940 3024 2.943345 GACAGCCGCACAACGTCAG 61.943 63.158 0.00 0.00 41.42 3.51
2941 3025 2.964925 GACAGCCGCACAACGTCA 60.965 61.111 0.00 0.00 41.42 4.35
2942 3026 2.661866 AGACAGCCGCACAACGTC 60.662 61.111 0.00 0.00 41.42 4.34
2943 3027 2.967076 CAGACAGCCGCACAACGT 60.967 61.111 0.00 0.00 41.42 3.99
2944 3028 3.716006 CCAGACAGCCGCACAACG 61.716 66.667 0.00 0.00 43.15 4.10
2945 3029 0.882927 TAACCAGACAGCCGCACAAC 60.883 55.000 0.00 0.00 0.00 3.32
2946 3030 0.882927 GTAACCAGACAGCCGCACAA 60.883 55.000 0.00 0.00 0.00 3.33
2947 3031 1.301401 GTAACCAGACAGCCGCACA 60.301 57.895 0.00 0.00 0.00 4.57
2948 3032 2.033194 GGTAACCAGACAGCCGCAC 61.033 63.158 0.00 0.00 0.00 5.34
2949 3033 2.345991 GGTAACCAGACAGCCGCA 59.654 61.111 0.00 0.00 0.00 5.69
2961 3045 6.913873 TGTTAATTAGATTGCTCGGGTAAC 57.086 37.500 0.00 0.00 0.00 2.50
2962 3046 7.608761 AGTTTGTTAATTAGATTGCTCGGGTAA 59.391 33.333 0.00 0.00 0.00 2.85
2963 3047 7.107542 AGTTTGTTAATTAGATTGCTCGGGTA 58.892 34.615 0.00 0.00 0.00 3.69
2964 3048 5.944007 AGTTTGTTAATTAGATTGCTCGGGT 59.056 36.000 0.00 0.00 0.00 5.28
2965 3049 6.436843 AGTTTGTTAATTAGATTGCTCGGG 57.563 37.500 0.00 0.00 0.00 5.14
2966 3050 7.305474 ACAAGTTTGTTAATTAGATTGCTCGG 58.695 34.615 0.00 0.00 38.47 4.63
2967 3051 9.988350 ATACAAGTTTGTTAATTAGATTGCTCG 57.012 29.630 2.46 0.00 42.35 5.03
2972 3056 9.567848 CCGCAATACAAGTTTGTTAATTAGATT 57.432 29.630 2.46 0.00 42.35 2.40
2973 3057 7.700656 GCCGCAATACAAGTTTGTTAATTAGAT 59.299 33.333 2.46 0.00 42.35 1.98
2974 3058 7.024768 GCCGCAATACAAGTTTGTTAATTAGA 58.975 34.615 2.46 0.00 42.35 2.10
2975 3059 7.008266 CAGCCGCAATACAAGTTTGTTAATTAG 59.992 37.037 2.46 0.00 42.35 1.73
2976 3060 6.804295 CAGCCGCAATACAAGTTTGTTAATTA 59.196 34.615 2.46 0.00 42.35 1.40
2977 3061 5.633182 CAGCCGCAATACAAGTTTGTTAATT 59.367 36.000 2.46 0.00 42.35 1.40
2978 3062 5.160641 CAGCCGCAATACAAGTTTGTTAAT 58.839 37.500 2.46 0.00 42.35 1.40
2979 3063 4.541779 CAGCCGCAATACAAGTTTGTTAA 58.458 39.130 2.46 0.00 42.35 2.01
2980 3064 3.610585 GCAGCCGCAATACAAGTTTGTTA 60.611 43.478 2.46 0.00 39.26 2.41
2981 3065 2.862140 GCAGCCGCAATACAAGTTTGTT 60.862 45.455 2.46 0.00 39.26 2.83
2982 3066 1.335872 GCAGCCGCAATACAAGTTTGT 60.336 47.619 2.75 2.75 40.71 2.83
3046 3131 3.878086 TGTAAGAAAAGCTGAGTTGCG 57.122 42.857 0.00 0.00 38.13 4.85
3047 3132 4.913924 CACATGTAAGAAAAGCTGAGTTGC 59.086 41.667 0.00 0.00 0.00 4.17
3048 3133 5.009010 ACCACATGTAAGAAAAGCTGAGTTG 59.991 40.000 0.00 0.00 0.00 3.16
3049 3134 5.133221 ACCACATGTAAGAAAAGCTGAGTT 58.867 37.500 0.00 0.00 0.00 3.01
3050 3135 4.718961 ACCACATGTAAGAAAAGCTGAGT 58.281 39.130 0.00 0.00 0.00 3.41
3051 3136 4.756642 TGACCACATGTAAGAAAAGCTGAG 59.243 41.667 0.00 0.00 0.00 3.35
3056 3142 3.813166 ACCGTGACCACATGTAAGAAAAG 59.187 43.478 0.00 0.00 0.00 2.27
3061 3147 4.755411 AGAATACCGTGACCACATGTAAG 58.245 43.478 0.00 0.00 0.00 2.34
3065 3152 4.649088 TCTAGAATACCGTGACCACATG 57.351 45.455 0.00 0.00 0.00 3.21
3077 3164 2.037902 GGAGGCTGCCCTTCTAGAATAC 59.962 54.545 16.57 0.00 43.12 1.89
3078 3165 2.090494 AGGAGGCTGCCCTTCTAGAATA 60.090 50.000 16.57 0.00 45.82 1.75
3089 3176 0.037447 AGTCAGAAAAGGAGGCTGCC 59.963 55.000 11.65 11.65 0.00 4.85
3090 3177 1.809547 GAAGTCAGAAAAGGAGGCTGC 59.190 52.381 0.00 0.00 0.00 5.25
3091 3178 3.415457 AGAAGTCAGAAAAGGAGGCTG 57.585 47.619 0.00 0.00 0.00 4.85
3092 3179 4.595350 AGTTAGAAGTCAGAAAAGGAGGCT 59.405 41.667 0.00 0.00 0.00 4.58
3171 3258 7.233144 ACCGTTTTATGTTTTAGGGTGGTAATT 59.767 33.333 0.00 0.00 0.00 1.40
3172 3259 6.720748 ACCGTTTTATGTTTTAGGGTGGTAAT 59.279 34.615 0.00 0.00 0.00 1.89
3173 3260 6.016443 CACCGTTTTATGTTTTAGGGTGGTAA 60.016 38.462 0.00 0.00 40.84 2.85
3174 3261 5.472820 CACCGTTTTATGTTTTAGGGTGGTA 59.527 40.000 0.00 0.00 40.84 3.25
3175 3262 4.278919 CACCGTTTTATGTTTTAGGGTGGT 59.721 41.667 0.00 0.00 40.84 4.16
3176 3263 4.519730 TCACCGTTTTATGTTTTAGGGTGG 59.480 41.667 11.48 0.00 43.29 4.61
3178 3265 5.008911 GTGTCACCGTTTTATGTTTTAGGGT 59.991 40.000 0.00 0.00 0.00 4.34
3179 3266 5.239963 AGTGTCACCGTTTTATGTTTTAGGG 59.760 40.000 0.00 0.00 0.00 3.53
3180 3267 6.017770 TGAGTGTCACCGTTTTATGTTTTAGG 60.018 38.462 0.00 0.00 0.00 2.69
3181 3268 6.849305 GTGAGTGTCACCGTTTTATGTTTTAG 59.151 38.462 0.00 0.00 41.37 1.85
3182 3269 6.717413 GTGAGTGTCACCGTTTTATGTTTTA 58.283 36.000 0.00 0.00 41.37 1.52
3183 3270 5.575019 GTGAGTGTCACCGTTTTATGTTTT 58.425 37.500 0.00 0.00 41.37 2.43
3184 3271 5.164606 GTGAGTGTCACCGTTTTATGTTT 57.835 39.130 0.00 0.00 41.37 2.83
3262 4794 6.549433 ACCCATGCTGTTATGATGAAAAAT 57.451 33.333 0.00 0.00 0.00 1.82
3391 4940 0.390860 CTAGAGGCATCCCTGTTCCG 59.609 60.000 0.00 0.00 43.12 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.