>input_sequence_47209
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---------------------------------------------------------------ATGGACATGGACATGGA
CATGGAGGGGGGCTCGCAGTCGCAGCCGCAGGGCGCCTCGCTCTCGCCGGCGCCGTTCCTGATCAAGACCTACGAGATGG
TGGAGGACCCGGCGACCAGCCGCGTGGTGTCGTGGGGCCCCGGCGGCGCCAGCTTCGTGGTGTGGAACCCGCCCGACTTC
TCCCGGGACCTGCTGCCCAAGTACTTCAAGCACAACAACTTCTCTAGCTTCATCCGGCAGCTCAACACCTACGTGAGTTG
ATCCACTCCATCGCTTCAACCTCTTTTTCCGTTTCCAAAGTCCAATCGTTGCATACGGTTTGCTTCCGTTCATCCATGAC
GTTTTCACTACATGATTACGGATGTATAAAGACATAATTTTAGAGTATAGATTCGTTCATTTTGCTTCGTATGTAGTCCG
TATTGAAACCTCTAAAAAGACTTATATTTAGAAATGAAGGGAGTATATCTTGATAATTTTCTTGTGACGTACTGATTGTT
GATTTCATTTGTTTGATCGTCTCAGGGTTTCCGGAAGATCGACCCGGAGCGATGGGAGTTCGCGAACGACGACTTCATCA
GGGGGCACATGCACCTCCTGAAGAACATCCACCGGCGCAAGCCGGTGCACAGCCACTCGCCGCAGAACCAGGTGAACGGG
CCGCTGGCGGAGTCGGAGAGGCGCGAGTACGAGGAGGAGATCAGCAGGCTCAAGCACGAGAACAGCGTGCTCGTGGCAGA
GCTCCAGAGGCAGGCGCAGCAGCAGTGCGGTCTCAGCTGGCTGATGCAGTCGCTGGAGGAGCGGCTGCTGGCGATGGAGC
AGCGGCAGGCGGACGTCGTGGCCTCCGTGCGTGACATCCAGCAGAGGAGACGGGGCGACGTTCATCCAGGGCAGCAGACC
---ATGCTGGAACTGGAGCCGACAGACCATTTCAGCAAGAAGAGGAGGGTCCCGACGATCGGTTTCTTCGCCGAGGAGCC
C------------GCCGCGGCGGCCGAGGA---GCATCTGCGGGCGACTGGTGGTGAGACGCCGGGCATGGTCATGGTGA
ACGCCGAGCCTTTTGAGAAGATGGAGCTGGCCCTGGTCTCCATGGAGAAGCTCGTCCAGAGGGCGGGCAACTATG---CG
CCCTCTGAAGACATGTTCAGCGCTGCTACTGCTTCTGCTTCTGCTGCA---CCCAGCACTGATGATCCGGCTCATGCAGG
TCTGCAGGAAGCACCAGTGGAGACCGGAGTAGATCTTCAGCCAACTTCACCGGAGCTAGCAGAGCCTCCGGGTTATGCTG
TCCAGAGTCCAATGCTACTATTCCCAGAAATTCAAGAAGACAAGCGCAATACAACGGCCGAAGTCGACATGAGCTCCGAG
GCCAGCACCACAGGCACTTCGCAGGACGAGACGAACGCCGAGGCCGAGACTCCA------------CATGAACAGGCCGT
GGCGAACGATCTGTTCTGGGAGCGGTTTCTGACAGACACGCCGAAGCCGCTAGCCGTCGAGGATAGCCATGAATCCAAGG
ACGGTGTGAAGATGGGCCTAGACTGCTACTGGTTCGGTCACCGTAACAATGTCGACCAGATCACCGAGCAGATGGGGCAC
CTCGCTTCTGCACAGAAGACCTGA--------------------------------------------------------
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------------------------------------
>chr1A_1_TraesCS1A01G350400
TGGACTTGTTGGAATCAGTTTGGCCCCGAGTGGCGGTTCTGTAATAGATAGTTAGACCTTTCAATATTTGTGCTGCTCAG
GTTTTCGCCTCATGGCATTTATCATAATGTCGGTCAAATGTGGTGAATTTTCTGACGGTGCGTGAACTCGCTTTTCTCCT
TTCCCTCCTCCTTGAACTTGTTTCTGGAACTGTTGTATTTCCGTCCATTGCAATGGAAAGGGGTTAATGCCCGGTTCAAA
AAGCTTGCCCACTGTGTCCAAATGATCAATCAACCGTGATCTATTCCGGTCGCCGCTCGCCGGACGAGTGGAATCGTGTG
CGCGCTAGCTAGCTGGTCCGCTGACTCCGACGACCGGCTGCCGGTCCGCGTCTAGAAGCGGGACACGCCACGACGGCTGC
GCCATGCGCTGCTCAGTCAAACGTCACATGCAACGACCAGCCCGTAAGCTGAGCGCAACCACAC----GTCCACGTCGCG
CGACGACGGCCGTCCTATAAAAGGCCGCCCGCGCGCCACCTGCACCGGTGGCGCCGCCCGCCTTTTCCACCCCGATCCCT
CCCTCTCTTCTACCTCCGGATCCGCCACCTCCACTACGTTGTTCTCCGGAATCCCGCCTCCTAAACATTTCTCCCGTCGG
CCGGCCGGAAGGGAAGGACC---------------TCGCCGGTGTCTTCGCCGCAGGTGCGCCGGAGTTCTCCCCCGTTT
CTCTTGTCCCCTGTTTCTCGCCGGACGCCGGCAAAGTTGCCAAATTATTGACTGTTACTGCAGTTCAGCTTGCACCCTTT
GCTTGTACGGCTACGCTTGCTTAACGGACTCTT----TTGCTTCCGCCCGTGCTTGCAGAACAAGTCGATTAGATCGACG
ACAAGTCGCGGTCTTTGCCCACTTGGTGACCGAGAATTTTCCACCGCGTGCAGTTTGATTCATGTGAACAAAGAGCGGCA
CCGAATCGAATCGAATCCAATCCAGTTGAAGACTTTCTCGCCGAGCTGGGCCGATCGACGGACATGGACATGGACATGGA
CATGGAGGGGGGCTCGCAGTCGCAGCCGCAGGGCGCCTCGCTCTCGCCGGCGCCGTTCCTGATCAAGACCTACGAGATGG
TGGAGGACCCGGCGACCAGCCGCGTGGTGTCGTGGGGCCCCGGCGGCGCCAGCTTCGTGGTGTGGAACCCGCCCGACTTC
TCCCGGGACCTGCTGCCCAAGTACTTCAAGCACAACAACTTCTCTAGCTTCATCCGGCAGCTCAACACCTACGTGAGTTG
ATCCACTCCATCGCTTCAACCTCTTTTTCCGTTTCCAAAGTCCAATCGTTGCATACGGTTTGCTTCCGTTCATCCATGAC
GTTTTCACTACATGATTACGGATGTATAAAGACATAATTTTAGAGTATAGATTCGTTCATTTTGCTTCGTATGTAGTCCG
TATTGAAACCTCTAAAAAGACTTATATTTAGAAATGAAGGGAGTATATCTTGATAATTTTCTTGTGACGTACTGATTGTT
GATTTCATTTGTTTGATCGTCTCAGGGTTTCCGGAAGATCGACCCGGAGCGATGGGAGTTCGCGAACGACGACTTCATCA
GGGGGCACATGCACCTCCTGAAGAACATCCACCGGCGCAAGCCGGTGCACAGCCACTCGCCGCAGAACCAGGTGAACGGG
CCGCTGGCGGAGTCGGAGAGGCGCGAGTACGAGGAGGAGATCAGCAGGCTCAAGCACGAGAACAGCGTGCTCGTGGCAGA
GCTCCAGAGGCAGGCGCAGCAGCAGTGCGGTCTCAGCTGGCTGATGCAGTCGCTGGAGGAGCGGCTGCTGGCGATGGAGC
AGCGGCAGGCGGACGTCGTGGCCTCCGTGCGTGACATCCAGCAGAGGAGACGGGGCGACGTTCATCCAGGGCAGCAGACC
---ATGCTGGAACTGGAGCCGACAGACCATTTCAGCAAGAAGAGGAGGGTCCCGACGATCGGTTTCTTCGCCGAGGAGCC
C------------GCCGCGGCGGCCGAGGA---GCATCTGCGGGCGACTGGTGGTGAGACGCCGGGCATGGTCATGGTGA
ACGCCGAGCCTTTTGAGAAGATGGAGCTGGCCCTGGTCTCCATGGAGAAGCTCGTCCAGAGGGCGGGCAACTATG---CG
CCCTCTGAAGACATGTTCAGCGCTGCTACTGCTTCTGCTTCTGCTGCA---CCCAGCACTGATGATCCGGCTCATGCAGG
TCTGCAGGAAGCACCAGTGGAGACCGGAGTAGATCTTCAGCCAACTTCACCGGAGCTAGCAGAGCCTCCGGGTTATGCTG
TCCAGAGTCCAATGCTACTATTCCCAGAAATTCAAGAAGACAAGCGCAATACAACGGCCGAAGTCGACATGAGCTCCGAG
GCCAGCACCACAGGCACTTCGCAGGACGAGACGAACGCCGAGGCCGAGACTCCA------------CATGAACAGGCCGT
GGCGAACGATCTGTTCTGGGAGCGGTTTCTGACAGACACGCCGAAGCCGCTAGCCGTCGAGGATAGCCATGAATCCAAGG
ACGGTGTGAAGATGGGCCTAGACTGCTACTGGTTCGGTCACCGTAACAATGTCGACCAGATCACCGAGCAGATGGGGCAC
CTCGCTTCTGCACAGAAGACCTGATGGCTGGCCTACCATTTCCGCTCATGTATGGCCCATCCGTAAATTATACTCCCTCT
GTTCCGAATTACTTGTCTCGGATATGGATGTATCTAGAACTAACATACATCTAGATACATCCATTTCTACGACAAGTAAT
TCCGAACAAAGGAAGTAGTT-----TAGCCCGTCTCGCATGCCCTCATACTCTACAAGCATCTCC-TTTCAGATATATTG
TACG---GTATATAGCTCCTCGTCACACACTGTGCACATTTGTAAATTATTAGTCGCCAAGATACAATTTTGTAGTACAG
TGCCCTGACTTGTCGTGTGTATGCTTTGTTCCTGCTA---------------AAATAATCTCCCTGACGTTGTGCGGCTG
TCTGGTTACCCGAGCAATCTAATTAACAAACTTGTATTGCGGCTGCCAAAACATATGCTTTGGAAGAAAA-AAAATCATG
CGTTGAAAGACGCAAC-TCAGCTTTTCTT-ACATGTGGTCACGGTATTCTAGAAGGGCAGCCTCCTTTTCTGACTTCTAA
CTCAAGTAGTCAGTTTACCATTTAGACCTACAGATTGCCTTGATTAAACTGTTATAAAATTACCACCCTAAAACATAAAA
CGGTGACACTCACTGAAGCTAAGATGGCT---------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------AGTGCAGATCAAGGTGAACAGTTCATGTCAACAGCACAAATTTTTC
ATCATAACAGCATGGGTTATTCTCAGGCCGGCATTA------TACTAGTAAAGAACAAC---AAGCCAAAAATGTTCGG-
---CTAAAT----ATAGGGCTACAAGCGTCATATAGCACCATTGGTGACAGGTGGACGACGGAACAGGGATGCCTCTAGC
CCGCCACCTCTGGTT---TAGTAAATAAGTCCTGAACCATCAGAATAAAACCACGTGGTTCTCTAGCGTCTACATACCCC
AGGAGTAGATTCTACTGGAGGATTATGATAGTTATGTACACCTTGACTGTAACTTCGCACGTCGCAGGAAGCTGTGGGGC
TTTGCAGTTGGGAAGTCACCATCTTCAGAATCAAAG
>chr1B_247
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GCCCACTGTGTCCAAGTGATCGATCGACCGTGATCTATTCCGG-------TCGCCGGACGAGTGGAATCGTGTG
CGCGCTAGCTAGCTGGTCCGCTGACTCCGACGACCCGCTGCCGGTCCGCATCTAGAAGCGGGACACGCCACGACAGCCGC
GCCATGCGCTGGTCAGTCAAACGTCACATGCAACGACCAGCCCGTGCAC-AAACGCAACCACGC----GTCCACGTCGCG
CGACCACGGCCGCCCTAT-AAAGGCCGCCCGCGCGCCACCTGCACCGGTGGCGCCGCCCGCCTTTTCCACCCCGGTCCCT
CCCTCTCTTCTACCTCCGGATCCGCCACCTCCACTGCGTTTTCCTACGGAACCACCTCGAAGCTCGACATCA-----CGG
CCGGCCGGAACGGAATTACGGAAGGACCCGTGGTTTCGCCGGTGTCTTTGCCGCAGGTGAGCCGGAGTTCTCCTCCGTTT
CTCTCGTCCCCTATTTCTCGCCGGACGCCGGCCAAGTTGCCAA-TTATTGACTGTTACTGCACTTCAGTTTGCACCCTTT
GCTTGTACGGCTACGCTTGCTTAATTAACCGGCTGTGTTGCTTCCGTCCGTGCTTGCAGAACAAGTCGATCCGATCCACG
ACAAGTCGCCGTCTTTGCCCACTTGGTTACAGAGAATTTTCAACCGCATGCAGTTTGATTCATGTGAACAAAGAGCGGCA
CCGAATCCAATCTAATCCG-----GTTGAAGACTTTCTCGCCGAGCTGGGCCGATCGACGGACA------TGGAGATGGA
CATGGAGGGGGGCTCGCAGCCGCAGCCGCAGGGCGCCTCGCTCTCGCCGGCGCCGTTCCTGATCAAGACGTACGAGATGG
TGGAGGACCCGGCGACCAGCCGCGTCGTGTCGTGGGGCCCCGGCGGCGCCAGCTTCGTGGTGTGGAACCCGCCGGACTTC
TCCCGGGACCTGCTGCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTCATCCGGCAGCTCAACACCTACGTCAGTTG
CCCCACTCCATGTTTGATTTCGCAAAGAGTTTCT-CCTGCCATTGTT---------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ACT
GATTTCATATGCCGTC---TCTCAGGGTTTTCGGAAGATCGACCCGGAGCGATGGGAGTTCGCGAACGACGACTTCATCA
GGGGCCACATGCACCTCCTCAAGAACATCCACCGGCGCAAGCCGGTGCACAGCCACTCACCGCAGAACCAGGTGAACGGG
CCGCTGGCGGAGTCGGAGAGGCGCGAGTACGAGGAGGAGATCAGCAGGCTCAAGCACGAGAACGGCCTGCTCGTGGCAGA
GCTCCAGAGGCAGGCACAGCAGCAGTGCGGGCTCAGCTGGCTGATGCAGTCGCTGGAGGACCGGCTGACGGCGATGGAGC
AGCGGCAGGCGGACGTCGTGGCCTCCGTGCGCGACACCCTGCAGAGGAGACGGGGCGGCGTTCATCCACGGCAGGAGACC
ATGATGCTGGAACTGGAGCCGACGGACCATTTCAGCAAGAAGAGGAGGGTTCCGACGATCGGTTTCTTCGTCGAGGAGCC
C------------GCCGAGGAGCAGCGGGTGCCGCATCTGCGGGCGATGGGTGGTGAGACGCCGGGCATGGTCATGGTGA
ACGCCGAGCCCTTTGAGAAGATGGAGCTGGCCCTGGTCTCCATGGAGAAGCTCGTCCGGAGGGCCGGCGACTATGCGTCG
TCCTCTGAAGACATGTACAACGCCGCCGCC------------GCCGCTGCGCCCAGCACCGATGATCCGGCTCATGCAGA
TCTGCAGGCGGCGCCAGTGGAGACCGGAGCAAATCTTCAGCCGTCTTCACCGGAGCTAGCGGAGTCTCCGGGTTACGCTG
TCCAGAGTCCAATGCTACTATTCCCAGAAATTCACGAAGACAAGCGCAATACAACGGCCGAAGTCGACATGAGCTCCGAG
GCCAGCACCACAGACGCTTCGCAGGACGAGACGACCGCCGAGGCCGAGGCCGAGACCGGAGTTCCCCATGAACCGGCCGT
GGCGAACGATCTGTTCTGGGAGCGGTTTCTCACGGACACGCCCAAGCCGCTAGCCGTCGAGGAAAGCCATGGACCCGAGG
ACGATGTGAAGACCGGCCTAGACTGCTACTGGTTCGGTCACCGGAACAACGTTGATCAGATCACCGAGCAGATGGGGCAC
CTCGCTTCTGCTCAGAAGACCTGATGGCTGGCCTACCATTTCCGCTCGTGTATAGCCCATCTGTAAATTATA--------
--------------------------------------------------------------------------------
-----------------GTTTAGCCTAGCCTGTCTCACATGCCCTCAGCCTCTACAAGCATCTCCCTTTCAGATATAGTA
TTGTACAGTATATAGCTCCTCGTCACACACTCTGTACATTTGTAAATTAGTCGCAGAT---ATACAATTTTGAAGTCCGG
TGCCCTGACTTGTTGTGTGTATGCTTCTTCCTGGTGACCCGAGTAATAGCATTAA-------------------------
--------------------------CAAACTTGTATTGCGGCTGCCTAATCATATGCTTCGGAAGAAGAGGAAAACATG
CGTTGAAAGAACGTGATTCAGGTTTTTTT-AAATGTGGTCACGAGAATCTAGAAT----GCCTCCTTTTCTGACTTCTAA
CTCAAGTACTCATTTAACCATTTAGACCTACAGATTGCTCTGGTTAAAGTGTTAATATTACCACCTAT---AACC--AAA
CGGTGACACTGATTGAAGCGATGGCTATAAAGCGAACTAAGAGCGTCTCCAACAGACGCGCTAAGTGCCGCGCGCAAAAA
ATCTGTTTGCCGCGCGCGCTTCGGCTGATTTAGCGCGGCCGCGAGTGCTGGCTCCAGCAGCCGCGCTATAATGCAGCGCG
CGCGCGCCGCTCCAGCAGCGCGCAAAAATACAGCACGCGTGACTCGCGGGGCGCGCGTGAAAATGAGTTTGAAACAATTA
TCAAAATGCAATGAACATGTGAAATTTGTCACAAACATTTTCCAACCAAGTTCATGCCCACAAGTTCATCCAACCAAGTA
CAAAATGCAAACTAAAAGTTCATACCCACAAGACATAAATGAAAGACACATCAAACATCTTCCTCGTCTTCTTCATCATC
TTCCGAAGACGATTCTTCCGCCTCCGAAGATGAATCTTCCTCCCTATCCTCATCACGCATCGCCTTCGCGCCGCCGGAGC
CGCCGTGGCCGTCGAACGCACTGCAAGCTTCTTTCCCCTCGCCTTTGTGCCGCCGGAGCCGTCCGCCGCCTTGTTTTTCT
TCGCCGAAGTTTTACCCTTCTTCGGCCACGCCGCATTGGGGAGCTTCGACGATGCGGCGGCGGCACGGGACGGCGCCGGC
GCGACGCCACCCGTCGCCGTTGTCATCCACGGCGGCAACAAGAGGCTGTGCGCGAGGCCGGCGCTCGGCGGAGCTCCGGC
GGTGGCGACGCCAACGCTCCCCGCGCTAGGGTTTCCGACGGCGGCGGCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCGGCTGTACAGCAGGGTGCTGGTGTGCGCGTCCATGGGTGACAGGGCGCC
GACGCCGACGCGCGCGGGGCGTAGGAGGAGGAGAGGATTGAGTGCGGCGCGAGCGGTCAAGTGTGCCGCGCGCTGTAGCA
GGCGCCCGAAATACACCACGCGGGATGGCGTTTCCGACAGCGCGCCCAACTCATTATAGCGCACGCGCCGTTTTTGCGCG
CCGGCTGGAGCGACCCGCCGTGTTGCGCGCGCGCTAAAACCGACTAATTTGCGGCGCGGCGCTAGTTTAGCGCGCCTATT
GGAGATGCTCTAAATAAATATGACGCCTCACTTCAGTGCAGCTCAGGGTGAAGAGTTCATGTCAACAGCACAACTTCCAT
TGTAACAAGA----GGTTATTCTCAGGATGGCATTATGTTACTACTAGTAAAGAACATTGCCAAGCCAGAAAAAGTCCAA
GGACTAAAT----ATAGGGCTACAAGCGTCATATAGCACCATTGGTGGCTGGCGGACGAAGGAACAGGGATGCCTCTAGC
CCGCCACCTCTGGTTTTATAGTAAATAAGTCCTGAACCATCAAAATAAAACCACGTGGTTCTCTAGCGTCTACATACCCC
AGGAGTAGATTCTACTGGAGGATTATGATAGTTATGTACACCTTGACTGTAACTTCGCACGTCGCAGGAAGCTGTGGGGC
TTTGCAGTTGGGAAGTCACCATCTTCA---------
>chr1D_255
--------------------------------------------------------------------------------
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--------------TGTCCAAGTGATCGATCAACCGTGACCTATTCCGG-------TCGCCGGACCAGTGGAATCATGCG
CGCGCTA----GCTGGTCCGCTGACTCCGACGACCCGCTGCCGTTCCGCATCTAGAAGCAGGCCACGCCACCACGGCCGC
GCCATGCGCTGCTCCATCAAACGTCACATGCAACGACCAGCCCGTAAGATAAGCGCAACCACGTCCATGTCCACGTCGCG
CGACCACGGCCGCCCTAT-AAAGGCCGCCCGCGTGCCACCTGCACCGGTGGCGCCGCCCGCCTTTTCCACCCCGGTCCCT
CCCTCTCTTCTACCTCCGGATCCGCCACCTCCACTACGTTTTCCACCTCG-----------TAAACATTTCTCCCGTCTG
CCGGCCGGAACGGGAGGACC---------------TCGCCGTGGT-TTCGCCGCAGGTGAGCCGGAGTTCTCCTCCGTTT
CTCTCGTCCCCTGTTTCTCGCTGGACGCCGGCATAGTTGCCAA-CTATTGACTGTTACTCCAG------TTCCATCCTTT
GCTTGCACGGCTAAGCTAGCTTAACTGACTCTT----TTGCTTCCGTCCGTGCTTGCAGAACAAGTTGATTCGATCGACG
ACAAGTCGCTGTCTTTGCCAACTTGGTTACAGAGAATTTTCCACCGCGTGCGGCTTGATTCATGTGAACAAAGAGCGGCA
CCGAATCGAATCCAATCCAATCCAGTTGAAGACTTTCTCGCCGAGCTGGGCCGATCGACGGGCA------TGGACATCGA
CATGGAGGGTGGCTCGCAGCCGCAGCCGCAGGGCGCCTCGCTCTCGCCGGCGCCGTTCCTGATCAAGACCTACGAGATGG
TGGAGGACCCGGCGACCAACCGCGTGGTGTCGTGGGGCCCCGGCGGCGCCAGCTTCGTGGTGTGGAACCCGCCCGACTTC
TCGCGGGACCTGCTGCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTCATCAGGCAGCTCAACACCTACGTGAGTTG
CTCCACTCCATGTTTGATTTCGCAAATAGTTTCGACCTGCCATTGCTATTGCTCTTGCTGACTAC---------------
--------------------------------------------------------------------------------
---------------------------------------------------GATCTTCTTCTATGCTCGACCTAATCACT
GATTTCATCTGCCGTC---TCTCAGGGTTTTCGGAAGATCGACCCGGAGCGATGGGAGTTCGCCAACGACGACTTCATCA
GGGGGCACATGCACCTCCTCAAGAACATCCACCGGCGCAAGCCGGTGCACAGCCACTCGCCGCAGACCCAGGTGAACGGG
CCGCTGGCGGAGGCCGAGAGGCGCGAGTACGAGGAGGACATCAGCAGGCTCAAGCACGAGAACAGCGTGCTCGTGGCAGA
GCTCCAGAGGCAGGCGCGGCAGCAGTGCGGGCTCAGCTGGCTGATGCAGTCGCTGGAGGACCGGCTGATGGCGATGGAGC
GGCGGCAGGCGGACGTCGTCGCCTCCGTGCGCGACACCCTGCAGAGGAGACGGGGCGGCGTTCATCCAGGGCAGCAGACC
A---TGCTGGAACTGGAGCCGACCGACCATTTCAGCAAGAAGAGGAGGGTTCCGAGGCTCGGTTTCTTCGTCGAGGAGCC
CGCGGCGGCAGCGGCCGAGGAGCAGCGGGTGCCGCATCTGCGGGCGATGGGTGGTGAGACGCCGGGCATGGTCATGGTGA
ACGCCGAGCCTTTTGAGAAGATGGAGCTGGCCCTGGTCTCCATGGAGAAACTCGTCCAGAGGGCAGGCGACTATG---CG
TCCTCTGAAGACATGTACAACGCCGCCGCC------------GCTGCA---CCCAGCACCGATGATCCGGCTCATGCAGA
TCTGCAGGCAGCACC------------AGTAAATCTTCAGCCGTCTTCACCGGAGATAGCAGAGTCTCCGGGTTACGCTG
TCCAGAGTCCAATGCTACTATTCCCAGAAATTCACGAGGACAAGCACAAGACGATGGCCGAAGTTGACATGAGCTCCGAG
GCCAGCACCACAGACACTTCACAGGACGAGACGACCGCCGAGGCCGAGGCCGAGACCGGAGTTCCCCATGAACCGGCCGT
GGCGAACGATCTGTTCTGGGAGCGGTTTCTCACGGACACGCCCAAGCCGCTAGCCGTCGAGGATAGAAATGAATCCAAGG
ACGATGTAAAGACCGGCCTAGACTGCTACTGGTTCGGTCACCGGAACAATGTTGAACAGATCACCGAGCAGATGGGGCAC
CTCGCTTCTGCTCAGAAGACCTGATGGCTGGCCTACCATTTCCGCCCATATATAGCCCATCTGTAAATTATA--------
--------------------------------------------------------------------------------
-----------------GTT-----TAGCCCGTCTCACATGCCCTCATACTCTACAAGCATCTCCCTTTCAGATATATTT
GTATATAGCT------TCCTCGTCACACACACTGTACATTTGTAAATTATT-------AAGATACAATTTTGTAGTCCAG
TGCCCTGACTTGT---GTGTGTGCTTCGTTCCTGCTA---------------TAA-------------------------
--------------------------CAAACTTGCATTGCGGCTGCCAAATCATATGCAATGGAAGAACAGAAAAACATG
CGTTGAAAGAACGTGATTCGGTTTTATAAAAAATGTGGTCACGAGATTCTAGAAG----GCCTCCTTTTCTGACTTCTAA
CTCGAGTAGTCAGTTTACCATTTAGACCTAGAGATTGCCTTGATTAAACTGTTAAAATTACCGCCAAG---AACATAAAA
CGGTGACACTCACTGAAGCTAAGATGGCT---------------------------------------------------
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----------------------------------AGTGCAGATCAAGGTGAACAGTTCATGTCAACAGCACAG--TTTTC
ATCATAACAGCATGGGTTATTCTCAGGCCGGCATTAT------ACTAGTAAAGAACATCACAAAGCCAAAAATGTTCGG-
---CTAAATATAGATAGGGCTACAAGCGTCATATAGCACCATTGGTGACAGGTGGACGAAGGAACAGGGATGCCTCTAGC
CCGCCACCTCTGGTT---TAGTAAATAAGTCCTGAACCATCAAAATAAAACCGCGTGGTTCTCTAGCGTCTACATACCCC
AGGAGTAGATTATACTGGGGGATTATGATAGTTATGTACACCTTGACTGTAACTTCGCACTTCGCAGGAAGCTGTGAGGC
TTTGCAGTTGGGAAGTCACCATCTTCA---------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS---------------S-----S---------------------SSSSSSS------------------------
-----------------------------------S-------------S---------------------------S--
--------------------------------------------------S-----------S-----------------
----S-------S-----S-------------------------------------------------------S-----
----------------------------------------S-S--------S-S-SS-SSS-------------------
----------S------------------------------------------------S-------------S------
----S--------------------------------------S------------------------S-----------
-------------------------S--------------------S------------------------S--------
---------S-----------------S--S-------------------------------------------------
------------S---------------------------------------------------SSSSSS----------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
S----------SSS-SSSSS-S-SSS-SSSS-S-S-SSSSSSSSS-SS----SSSS-S-SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---SS-S----SSSSS--SS--S--SSS-
--------S--SSSSSSSS-----------S-------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-----------------------------S------S------------
-------------------------------S----S--S-----------------S----------------------
-----------------------S--------------------------S-------------------S---------
-----------------S--S-SSSSS--S-----------------SS-------------------------------
----------------------------------------------------------------S---S-----------
S---------------S--S---S--SS-SSSSSSSSSSSSS-----------------S-------------------S
--------S----------------------S----------SS--------------------S----------S----
----------------------------------S---------------------------------------------
-------------S--------------------S-------------S-SSSS-------------------S------
------------------------------S--S--------S-------------------------------------
---S--------SS-----------------------------S--------S--S------------------------
-----------S-----------------------------------------S-------S----------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS-------------------S------------------------------------------S
-SSS---------------------------S--S----------------S-SS-SS------------------S---
-------------S------------S-------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS------------------------S-----------------S------S----
----------SSSSSS-----S----S----S-----------SS----------SSSS---------------------
------------------------------------------------------S--SSSSSS-SSSSSSS---------
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-------------------------------------------------------------------------S------
---------------------------------------------------------S----------------------
-----------------------------------------------------------S--------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
---------------------------SSSSSSSSS
>forward_93
-------------------------------------------------------------------------TGCTCAG
GTTTTCGCCTCAT-------------------------------------------------------------------
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>reverse_1535
--------------------------------------------------------------------------------
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--------------GATCGTCTCAGGGTTTCCGG----------------------------------------------
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>forward_1302
--------------------------------------------------------------------------------
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--CCACTCCATCGCTTCAACCT----------------------------------------------------------
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>reverse_3176
--------------------------------------------------------------------------------
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-------------------------------------------------------GGCAGCCTCCTTTTCTGACT-----
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