Multiple sequence alignment - TraesCS1A01G328100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G328100 chr1A 100.000 2732 0 0 1 2732 517397066 517399797 0.000000e+00 5046.0
1 TraesCS1A01G328100 chr1D 88.058 1231 45 43 820 2031 421021252 421022399 0.000000e+00 1365.0
2 TraesCS1A01G328100 chr1D 83.667 649 38 29 2103 2731 421022555 421023155 1.430000e-152 549.0
3 TraesCS1A01G328100 chr1D 77.891 294 44 16 49 329 321677183 321676898 2.180000e-36 163.0
4 TraesCS1A01G328100 chr1D 97.872 47 1 0 1 47 421021181 421021227 6.270000e-12 82.4
5 TraesCS1A01G328100 chr1B 88.832 1164 55 32 895 2028 570023176 570024294 0.000000e+00 1360.0
6 TraesCS1A01G328100 chr1B 92.308 312 12 4 2103 2402 570024500 570024811 1.500000e-117 433.0
7 TraesCS1A01G328100 chr1B 84.170 259 33 6 538 791 502239316 502239571 7.560000e-61 244.0
8 TraesCS1A01G328100 chr1B 86.977 215 19 3 2526 2731 570025061 570025275 1.640000e-57 233.0
9 TraesCS1A01G328100 chr3B 86.517 356 41 7 438 790 555075190 555075541 4.270000e-103 385.0
10 TraesCS1A01G328100 chr3B 90.110 91 8 1 174 264 555065257 555065346 1.720000e-22 117.0
11 TraesCS1A01G328100 chr3B 81.699 153 16 8 281 432 555075095 555075236 1.720000e-22 117.0
12 TraesCS1A01G328100 chr7D 84.341 364 42 11 432 790 543586240 543586593 2.610000e-90 342.0
13 TraesCS1A01G328100 chr4D 81.910 398 50 9 49 425 152692730 152693126 1.580000e-82 316.0
14 TraesCS1A01G328100 chr4A 90.598 234 20 1 191 424 468762051 468762282 2.640000e-80 309.0
15 TraesCS1A01G328100 chr4A 88.172 93 9 2 174 266 468761963 468762053 2.880000e-20 110.0
16 TraesCS1A01G328100 chr6B 81.440 361 48 8 432 790 141626315 141625972 7.450000e-71 278.0
17 TraesCS1A01G328100 chr6B 79.775 178 31 5 610 785 180937480 180937306 1.030000e-24 124.0
18 TraesCS1A01G328100 chr6B 77.838 185 35 5 609 790 542915857 542916038 2.880000e-20 110.0
19 TraesCS1A01G328100 chr3D 80.930 215 34 6 564 775 263987618 263987828 2.180000e-36 163.0
20 TraesCS1A01G328100 chr2D 80.220 182 31 4 612 791 625130159 625129981 6.140000e-27 132.0
21 TraesCS1A01G328100 chr4B 73.418 237 52 10 557 788 504827864 504828094 8.110000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G328100 chr1A 517397066 517399797 2731 False 5046.000000 5046 100.000000 1 2732 1 chr1A.!!$F1 2731
1 TraesCS1A01G328100 chr1D 421021181 421023155 1974 False 665.466667 1365 89.865667 1 2731 3 chr1D.!!$F1 2730
2 TraesCS1A01G328100 chr1B 570023176 570025275 2099 False 675.333333 1360 89.372333 895 2731 3 chr1B.!!$F2 1836

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
667 668 0.03254 CATACCCGTACCCGCCTAAC 59.967 60.0 0.0 0.0 0.0 2.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1905 1936 0.036577 GTGCAGTGCAGTGGAGATCT 60.037 55.0 20.42 0.0 40.08 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.190578 GGCGAGACCCAATCCCTG 59.809 66.667 0.00 0.00 0.00 4.45
47 48 3.770040 CCTGTCCATCGCCGTCCA 61.770 66.667 0.00 0.00 0.00 4.02
50 51 2.296814 CTGTCCATCGCCGTCCATCA 62.297 60.000 0.00 0.00 0.00 3.07
51 52 1.153449 GTCCATCGCCGTCCATCAA 60.153 57.895 0.00 0.00 0.00 2.57
52 53 1.153449 TCCATCGCCGTCCATCAAC 60.153 57.895 0.00 0.00 0.00 3.18
53 54 1.449423 CCATCGCCGTCCATCAACA 60.449 57.895 0.00 0.00 0.00 3.33
55 56 0.305617 CATCGCCGTCCATCAACATG 59.694 55.000 0.00 0.00 0.00 3.21
63 64 1.361271 CCATCAACATGGCATCCGC 59.639 57.895 0.00 0.00 43.55 5.54
64 65 1.385756 CCATCAACATGGCATCCGCA 61.386 55.000 0.00 0.00 43.55 5.69
79 80 3.798794 CGCAGGATTTGGGTATGGA 57.201 52.632 0.00 0.00 35.17 3.41
80 81 2.276732 CGCAGGATTTGGGTATGGAT 57.723 50.000 0.00 0.00 35.17 3.41
81 82 3.417069 CGCAGGATTTGGGTATGGATA 57.583 47.619 0.00 0.00 35.17 2.59
82 83 3.955471 CGCAGGATTTGGGTATGGATAT 58.045 45.455 0.00 0.00 35.17 1.63
83 84 4.335416 CGCAGGATTTGGGTATGGATATT 58.665 43.478 0.00 0.00 35.17 1.28
84 85 5.496556 CGCAGGATTTGGGTATGGATATTA 58.503 41.667 0.00 0.00 35.17 0.98
85 86 5.354234 CGCAGGATTTGGGTATGGATATTAC 59.646 44.000 0.00 0.00 35.17 1.89
86 87 5.354234 GCAGGATTTGGGTATGGATATTACG 59.646 44.000 0.00 0.00 0.00 3.18
87 88 6.472887 CAGGATTTGGGTATGGATATTACGT 58.527 40.000 0.00 0.00 0.00 3.57
88 89 6.371548 CAGGATTTGGGTATGGATATTACGTG 59.628 42.308 0.00 0.00 0.00 4.49
89 90 5.123344 GGATTTGGGTATGGATATTACGTGC 59.877 44.000 0.00 0.00 0.00 5.34
90 91 3.688694 TGGGTATGGATATTACGTGCC 57.311 47.619 0.00 0.00 0.00 5.01
91 92 2.303600 TGGGTATGGATATTACGTGCCC 59.696 50.000 15.42 15.42 46.40 5.36
92 93 2.303600 GGGTATGGATATTACGTGCCCA 59.696 50.000 16.66 0.00 45.76 5.36
93 94 3.054655 GGGTATGGATATTACGTGCCCAT 60.055 47.826 16.66 6.30 45.76 4.00
94 95 4.162698 GGGTATGGATATTACGTGCCCATA 59.837 45.833 16.66 5.32 45.76 2.74
95 96 5.163237 GGGTATGGATATTACGTGCCCATAT 60.163 44.000 16.66 5.68 45.76 1.78
96 97 5.989777 GGTATGGATATTACGTGCCCATATC 59.010 44.000 14.61 12.04 40.63 1.63
97 98 5.957771 ATGGATATTACGTGCCCATATCT 57.042 39.130 0.00 0.00 35.99 1.98
98 99 5.084818 TGGATATTACGTGCCCATATCTG 57.915 43.478 0.00 0.00 32.55 2.90
99 100 3.871594 GGATATTACGTGCCCATATCTGC 59.128 47.826 0.00 0.00 32.55 4.26
100 101 2.928801 ATTACGTGCCCATATCTGCA 57.071 45.000 0.00 0.00 34.54 4.41
104 105 3.752622 TGCCCATATCTGCACCCA 58.247 55.556 0.00 0.00 31.31 4.51
105 106 2.243490 TGCCCATATCTGCACCCAT 58.757 52.632 0.00 0.00 31.31 4.00
106 107 0.111061 TGCCCATATCTGCACCCATC 59.889 55.000 0.00 0.00 31.31 3.51
107 108 0.403271 GCCCATATCTGCACCCATCT 59.597 55.000 0.00 0.00 0.00 2.90
108 109 1.612726 GCCCATATCTGCACCCATCTC 60.613 57.143 0.00 0.00 0.00 2.75
109 110 1.701292 CCCATATCTGCACCCATCTCA 59.299 52.381 0.00 0.00 0.00 3.27
110 111 2.107031 CCCATATCTGCACCCATCTCAA 59.893 50.000 0.00 0.00 0.00 3.02
111 112 3.435457 CCCATATCTGCACCCATCTCAAA 60.435 47.826 0.00 0.00 0.00 2.69
112 113 4.209538 CCATATCTGCACCCATCTCAAAA 58.790 43.478 0.00 0.00 0.00 2.44
113 114 4.646040 CCATATCTGCACCCATCTCAAAAA 59.354 41.667 0.00 0.00 0.00 1.94
133 134 3.286329 AAATTCACCCATACCCGTACC 57.714 47.619 0.00 0.00 0.00 3.34
134 135 2.185663 ATTCACCCATACCCGTACCT 57.814 50.000 0.00 0.00 0.00 3.08
135 136 1.196911 TTCACCCATACCCGTACCTG 58.803 55.000 0.00 0.00 0.00 4.00
136 137 0.041535 TCACCCATACCCGTACCTGT 59.958 55.000 0.00 0.00 0.00 4.00
137 138 1.287442 TCACCCATACCCGTACCTGTA 59.713 52.381 0.00 0.00 0.00 2.74
138 139 1.410153 CACCCATACCCGTACCTGTAC 59.590 57.143 0.00 0.00 0.00 2.90
139 140 1.043022 CCCATACCCGTACCTGTACC 58.957 60.000 2.04 0.00 32.61 3.34
140 141 1.043022 CCATACCCGTACCTGTACCC 58.957 60.000 2.04 0.00 32.61 3.69
141 142 1.688942 CCATACCCGTACCTGTACCCA 60.689 57.143 2.04 0.00 32.61 4.51
142 143 1.410153 CATACCCGTACCTGTACCCAC 59.590 57.143 2.04 0.00 32.61 4.61
143 144 0.679640 TACCCGTACCTGTACCCACG 60.680 60.000 2.04 0.00 32.61 4.94
144 145 2.182537 CCGTACCTGTACCCACGC 59.817 66.667 2.04 0.00 33.19 5.34
145 146 2.638354 CCGTACCTGTACCCACGCA 61.638 63.158 2.04 0.00 33.19 5.24
146 147 1.444895 CGTACCTGTACCCACGCAC 60.445 63.158 2.04 0.00 32.61 5.34
147 148 1.079612 GTACCTGTACCCACGCACC 60.080 63.158 0.00 0.00 0.00 5.01
148 149 2.638354 TACCTGTACCCACGCACCG 61.638 63.158 0.00 0.00 0.00 4.94
149 150 4.752879 CCTGTACCCACGCACCGG 62.753 72.222 0.00 0.00 0.00 5.28
155 156 4.939368 CCCACGCACCGGGTTTCA 62.939 66.667 6.32 0.00 39.05 2.69
156 157 2.902846 CCACGCACCGGGTTTCAA 60.903 61.111 6.32 0.00 0.00 2.69
157 158 2.482333 CCACGCACCGGGTTTCAAA 61.482 57.895 6.32 0.00 0.00 2.69
158 159 1.298788 CACGCACCGGGTTTCAAAC 60.299 57.895 6.32 0.00 0.00 2.93
159 160 1.452470 ACGCACCGGGTTTCAAACT 60.452 52.632 6.32 0.00 0.00 2.66
160 161 1.008995 CGCACCGGGTTTCAAACTG 60.009 57.895 6.32 0.00 0.00 3.16
161 162 1.720694 CGCACCGGGTTTCAAACTGT 61.721 55.000 6.32 0.00 0.00 3.55
162 163 0.458260 GCACCGGGTTTCAAACTGTT 59.542 50.000 6.32 0.00 0.00 3.16
163 164 1.535226 GCACCGGGTTTCAAACTGTTC 60.535 52.381 6.32 0.00 0.00 3.18
164 165 1.066454 CACCGGGTTTCAAACTGTTCC 59.934 52.381 6.32 0.00 0.00 3.62
165 166 0.671796 CCGGGTTTCAAACTGTTCCC 59.328 55.000 0.00 4.56 0.00 3.97
167 168 1.395635 GGGTTTCAAACTGTTCCCGT 58.604 50.000 0.00 0.00 0.00 5.28
168 169 2.574450 GGGTTTCAAACTGTTCCCGTA 58.426 47.619 0.00 0.00 0.00 4.02
169 170 3.151554 GGGTTTCAAACTGTTCCCGTAT 58.848 45.455 0.00 0.00 0.00 3.06
170 171 3.057806 GGGTTTCAAACTGTTCCCGTATG 60.058 47.826 0.00 0.00 0.00 2.39
171 172 3.561503 GTTTCAAACTGTTCCCGTATGC 58.438 45.455 0.00 0.00 0.00 3.14
172 173 1.434555 TCAAACTGTTCCCGTATGCG 58.565 50.000 0.00 0.00 37.95 4.73
173 174 1.153353 CAAACTGTTCCCGTATGCGT 58.847 50.000 1.69 0.00 36.15 5.24
174 175 2.029200 TCAAACTGTTCCCGTATGCGTA 60.029 45.455 1.69 0.00 36.15 4.42
175 176 2.000429 AACTGTTCCCGTATGCGTAC 58.000 50.000 5.98 5.98 36.15 3.67
176 177 0.174162 ACTGTTCCCGTATGCGTACC 59.826 55.000 10.49 0.00 36.15 3.34
177 178 0.529119 CTGTTCCCGTATGCGTACCC 60.529 60.000 10.49 0.00 36.15 3.69
178 179 1.589727 GTTCCCGTATGCGTACCCG 60.590 63.158 10.49 0.00 36.15 5.28
179 180 2.051518 TTCCCGTATGCGTACCCGT 61.052 57.895 10.49 0.00 36.15 5.28
180 181 2.278989 CCCGTATGCGTACCCGTG 60.279 66.667 10.49 0.00 36.15 4.94
181 182 2.278989 CCGTATGCGTACCCGTGG 60.279 66.667 10.49 2.17 36.15 4.94
182 183 2.278989 CGTATGCGTACCCGTGGG 60.279 66.667 10.49 2.58 42.03 4.61
202 203 4.564782 GGTAAAAACTACCCAGCTAGGT 57.435 45.455 9.37 9.37 44.37 3.08
203 204 4.259356 GGTAAAAACTACCCAGCTAGGTG 58.741 47.826 14.73 15.13 41.42 4.00
204 205 4.263199 GGTAAAAACTACCCAGCTAGGTGT 60.263 45.833 19.98 7.29 41.42 4.16
205 206 3.418684 AAAACTACCCAGCTAGGTGTG 57.581 47.619 19.98 11.93 41.42 3.82
206 207 2.025636 AACTACCCAGCTAGGTGTGT 57.974 50.000 19.98 17.19 41.42 3.72
207 208 2.913603 ACTACCCAGCTAGGTGTGTA 57.086 50.000 19.98 17.39 41.42 2.90
208 209 3.399952 ACTACCCAGCTAGGTGTGTAT 57.600 47.619 19.98 7.27 41.42 2.29
209 210 3.031736 ACTACCCAGCTAGGTGTGTATG 58.968 50.000 19.98 14.15 41.42 2.39
210 211 1.952621 ACCCAGCTAGGTGTGTATGT 58.047 50.000 19.98 6.79 39.24 2.29
211 212 2.266279 ACCCAGCTAGGTGTGTATGTT 58.734 47.619 19.98 0.00 39.24 2.71
212 213 2.642807 ACCCAGCTAGGTGTGTATGTTT 59.357 45.455 19.98 0.00 39.24 2.83
213 214 3.009723 CCCAGCTAGGTGTGTATGTTTG 58.990 50.000 19.98 2.05 34.66 2.93
214 215 3.307410 CCCAGCTAGGTGTGTATGTTTGA 60.307 47.826 19.98 0.00 34.66 2.69
215 216 3.935203 CCAGCTAGGTGTGTATGTTTGAG 59.065 47.826 19.98 0.00 0.00 3.02
216 217 3.372206 CAGCTAGGTGTGTATGTTTGAGC 59.628 47.826 13.89 0.00 0.00 4.26
217 218 3.007940 AGCTAGGTGTGTATGTTTGAGCA 59.992 43.478 0.00 0.00 0.00 4.26
218 219 3.941483 GCTAGGTGTGTATGTTTGAGCAT 59.059 43.478 0.00 0.00 0.00 3.79
219 220 4.396166 GCTAGGTGTGTATGTTTGAGCATT 59.604 41.667 0.00 0.00 0.00 3.56
220 221 5.106157 GCTAGGTGTGTATGTTTGAGCATTT 60.106 40.000 0.00 0.00 0.00 2.32
221 222 6.093495 GCTAGGTGTGTATGTTTGAGCATTTA 59.907 38.462 0.00 0.00 0.00 1.40
222 223 6.254281 AGGTGTGTATGTTTGAGCATTTAC 57.746 37.500 0.00 0.00 0.00 2.01
223 224 5.767665 AGGTGTGTATGTTTGAGCATTTACA 59.232 36.000 0.00 0.00 0.00 2.41
224 225 6.434028 AGGTGTGTATGTTTGAGCATTTACAT 59.566 34.615 0.00 0.00 35.55 2.29
225 226 7.039784 AGGTGTGTATGTTTGAGCATTTACATT 60.040 33.333 0.00 0.00 33.58 2.71
226 227 7.598493 GGTGTGTATGTTTGAGCATTTACATTT 59.402 33.333 0.00 0.00 33.58 2.32
227 228 8.977505 GTGTGTATGTTTGAGCATTTACATTTT 58.022 29.630 0.00 0.00 33.58 1.82
228 229 9.190858 TGTGTATGTTTGAGCATTTACATTTTC 57.809 29.630 0.00 0.00 33.58 2.29
229 230 8.365210 GTGTATGTTTGAGCATTTACATTTTCG 58.635 33.333 0.00 0.00 33.58 3.46
230 231 8.079203 TGTATGTTTGAGCATTTACATTTTCGT 58.921 29.630 0.00 0.00 33.58 3.85
231 232 9.549509 GTATGTTTGAGCATTTACATTTTCGTA 57.450 29.630 0.00 0.00 33.58 3.43
233 234 9.638239 ATGTTTGAGCATTTACATTTTCGTATT 57.362 25.926 0.00 0.00 0.00 1.89
234 235 9.469807 TGTTTGAGCATTTACATTTTCGTATTT 57.530 25.926 0.00 0.00 0.00 1.40
237 238 9.684448 TTGAGCATTTACATTTTCGTATTTTGA 57.316 25.926 0.00 0.00 0.00 2.69
238 239 9.123709 TGAGCATTTACATTTTCGTATTTTGAC 57.876 29.630 0.00 0.00 0.00 3.18
239 240 9.123709 GAGCATTTACATTTTCGTATTTTGACA 57.876 29.630 0.00 0.00 0.00 3.58
240 241 8.911662 AGCATTTACATTTTCGTATTTTGACAC 58.088 29.630 0.00 0.00 0.00 3.67
241 242 8.695284 GCATTTACATTTTCGTATTTTGACACA 58.305 29.630 0.00 0.00 0.00 3.72
250 251 9.605955 TTTTCGTATTTTGACACATATTGACAG 57.394 29.630 0.00 0.00 31.27 3.51
251 252 6.771076 TCGTATTTTGACACATATTGACAGC 58.229 36.000 0.00 0.00 31.27 4.40
252 253 6.370166 TCGTATTTTGACACATATTGACAGCA 59.630 34.615 0.00 0.00 31.27 4.41
253 254 7.065683 TCGTATTTTGACACATATTGACAGCAT 59.934 33.333 0.00 0.00 31.27 3.79
254 255 7.374228 CGTATTTTGACACATATTGACAGCATC 59.626 37.037 0.00 0.00 31.27 3.91
255 256 6.822667 TTTTGACACATATTGACAGCATCT 57.177 33.333 0.00 0.00 31.27 2.90
256 257 6.426980 TTTGACACATATTGACAGCATCTC 57.573 37.500 0.00 0.00 31.27 2.75
257 258 5.088680 TGACACATATTGACAGCATCTCA 57.911 39.130 0.00 0.00 0.00 3.27
258 259 5.490159 TGACACATATTGACAGCATCTCAA 58.510 37.500 0.00 0.00 32.24 3.02
259 260 5.352293 TGACACATATTGACAGCATCTCAAC 59.648 40.000 0.00 0.00 30.46 3.18
260 261 5.247862 ACACATATTGACAGCATCTCAACA 58.752 37.500 0.00 0.00 30.46 3.33
261 262 5.122869 ACACATATTGACAGCATCTCAACAC 59.877 40.000 0.00 0.00 30.46 3.32
262 263 5.122711 CACATATTGACAGCATCTCAACACA 59.877 40.000 0.00 0.00 30.46 3.72
263 264 5.884232 ACATATTGACAGCATCTCAACACAT 59.116 36.000 0.00 0.00 30.46 3.21
264 265 7.011669 CACATATTGACAGCATCTCAACACATA 59.988 37.037 0.00 0.00 30.46 2.29
265 266 5.808042 ATTGACAGCATCTCAACACATAC 57.192 39.130 0.00 0.00 30.46 2.39
266 267 4.270245 TGACAGCATCTCAACACATACA 57.730 40.909 0.00 0.00 0.00 2.29
267 268 4.835678 TGACAGCATCTCAACACATACAT 58.164 39.130 0.00 0.00 0.00 2.29
268 269 5.976458 TGACAGCATCTCAACACATACATA 58.024 37.500 0.00 0.00 0.00 2.29
269 270 5.812127 TGACAGCATCTCAACACATACATAC 59.188 40.000 0.00 0.00 0.00 2.39
270 271 5.733676 ACAGCATCTCAACACATACATACA 58.266 37.500 0.00 0.00 0.00 2.29
271 272 6.172630 ACAGCATCTCAACACATACATACAA 58.827 36.000 0.00 0.00 0.00 2.41
272 273 6.825213 ACAGCATCTCAACACATACATACAAT 59.175 34.615 0.00 0.00 0.00 2.71
273 274 7.986889 ACAGCATCTCAACACATACATACAATA 59.013 33.333 0.00 0.00 0.00 1.90
274 275 8.996271 CAGCATCTCAACACATACATACAATAT 58.004 33.333 0.00 0.00 0.00 1.28
275 276 9.565090 AGCATCTCAACACATACATACAATATT 57.435 29.630 0.00 0.00 0.00 1.28
276 277 9.817365 GCATCTCAACACATACATACAATATTC 57.183 33.333 0.00 0.00 0.00 1.75
281 282 9.844257 TCAACACATACATACAATATTCCATCA 57.156 29.630 0.00 0.00 0.00 3.07
282 283 9.882996 CAACACATACATACAATATTCCATCAC 57.117 33.333 0.00 0.00 0.00 3.06
283 284 9.625747 AACACATACATACAATATTCCATCACA 57.374 29.630 0.00 0.00 0.00 3.58
284 285 9.797642 ACACATACATACAATATTCCATCACAT 57.202 29.630 0.00 0.00 0.00 3.21
290 291 9.905713 ACATACAATATTCCATCACATATACCC 57.094 33.333 0.00 0.00 0.00 3.69
291 292 9.904198 CATACAATATTCCATCACATATACCCA 57.096 33.333 0.00 0.00 0.00 4.51
294 295 8.839745 ACAATATTCCATCACATATACCCATCT 58.160 33.333 0.00 0.00 0.00 2.90
297 298 6.874278 TTCCATCACATATACCCATCTAGG 57.126 41.667 0.00 0.00 37.03 3.02
298 299 6.165742 TCCATCACATATACCCATCTAGGA 57.834 41.667 0.00 0.00 41.22 2.94
299 300 6.197903 TCCATCACATATACCCATCTAGGAG 58.802 44.000 0.00 0.00 41.22 3.69
300 301 6.010739 TCCATCACATATACCCATCTAGGAGA 60.011 42.308 0.00 0.00 41.22 3.71
301 302 6.843333 CCATCACATATACCCATCTAGGAGAT 59.157 42.308 0.00 0.00 41.22 2.75
302 303 7.015098 CCATCACATATACCCATCTAGGAGATC 59.985 44.444 0.00 0.00 41.22 2.75
303 304 7.044496 TCACATATACCCATCTAGGAGATCA 57.956 40.000 0.00 0.00 41.22 2.92
304 305 7.122048 TCACATATACCCATCTAGGAGATCAG 58.878 42.308 0.00 0.00 41.22 2.90
305 306 6.323482 CACATATACCCATCTAGGAGATCAGG 59.677 46.154 0.00 1.99 41.22 3.86
306 307 6.220609 ACATATACCCATCTAGGAGATCAGGA 59.779 42.308 8.43 0.00 41.22 3.86
307 308 3.541242 ACCCATCTAGGAGATCAGGAG 57.459 52.381 8.43 0.00 41.22 3.69
308 309 3.067470 ACCCATCTAGGAGATCAGGAGA 58.933 50.000 8.43 0.00 41.22 3.71
309 310 3.469006 ACCCATCTAGGAGATCAGGAGAA 59.531 47.826 8.43 0.00 41.22 2.87
310 311 4.088634 CCCATCTAGGAGATCAGGAGAAG 58.911 52.174 0.00 0.00 41.22 2.85
311 312 4.088634 CCATCTAGGAGATCAGGAGAAGG 58.911 52.174 0.00 0.00 41.22 3.46
312 313 4.202663 CCATCTAGGAGATCAGGAGAAGGA 60.203 50.000 0.00 0.00 41.22 3.36
313 314 4.722526 TCTAGGAGATCAGGAGAAGGAG 57.277 50.000 0.00 0.00 0.00 3.69
314 315 2.086610 AGGAGATCAGGAGAAGGAGC 57.913 55.000 0.00 0.00 0.00 4.70
315 316 1.290431 AGGAGATCAGGAGAAGGAGCA 59.710 52.381 0.00 0.00 0.00 4.26
316 317 1.688197 GGAGATCAGGAGAAGGAGCAG 59.312 57.143 0.00 0.00 0.00 4.24
317 318 1.688197 GAGATCAGGAGAAGGAGCAGG 59.312 57.143 0.00 0.00 0.00 4.85
318 319 0.106521 GATCAGGAGAAGGAGCAGGC 59.893 60.000 0.00 0.00 0.00 4.85
319 320 1.344191 ATCAGGAGAAGGAGCAGGCC 61.344 60.000 0.00 0.00 0.00 5.19
320 321 3.080121 AGGAGAAGGAGCAGGCCG 61.080 66.667 0.00 0.00 0.00 6.13
321 322 4.168291 GGAGAAGGAGCAGGCCGG 62.168 72.222 0.00 0.00 0.00 6.13
322 323 3.077556 GAGAAGGAGCAGGCCGGA 61.078 66.667 5.05 0.00 0.00 5.14
323 324 3.080121 AGAAGGAGCAGGCCGGAG 61.080 66.667 5.05 0.00 0.00 4.63
338 339 2.985847 GAGGCGGCTGGTTGCTTT 60.986 61.111 19.63 0.00 42.39 3.51
339 340 2.982744 GAGGCGGCTGGTTGCTTTC 61.983 63.158 19.63 0.00 42.39 2.62
340 341 3.294493 GGCGGCTGGTTGCTTTCA 61.294 61.111 0.00 0.00 42.39 2.69
341 342 2.639327 GGCGGCTGGTTGCTTTCAT 61.639 57.895 0.00 0.00 42.39 2.57
342 343 1.444895 GCGGCTGGTTGCTTTCATG 60.445 57.895 0.00 0.00 42.39 3.07
343 344 1.444895 CGGCTGGTTGCTTTCATGC 60.445 57.895 0.00 0.00 42.39 4.06
344 345 1.667151 GGCTGGTTGCTTTCATGCA 59.333 52.632 0.00 0.00 42.39 3.96
345 346 0.668401 GGCTGGTTGCTTTCATGCAC 60.668 55.000 0.00 0.00 43.20 4.57
346 347 1.005294 GCTGGTTGCTTTCATGCACG 61.005 55.000 0.00 0.00 43.20 5.34
347 348 1.005294 CTGGTTGCTTTCATGCACGC 61.005 55.000 0.00 0.00 43.20 5.34
348 349 1.007502 GGTTGCTTTCATGCACGCA 60.008 52.632 0.00 0.00 43.20 5.24
349 350 1.005294 GGTTGCTTTCATGCACGCAG 61.005 55.000 0.00 0.00 43.20 5.18
350 351 1.372004 TTGCTTTCATGCACGCAGC 60.372 52.632 0.00 0.00 43.20 5.25
405 406 4.460873 GCGTTAGCAAGTGGGCGC 62.461 66.667 0.00 0.00 44.35 6.53
406 407 4.147322 CGTTAGCAAGTGGGCGCG 62.147 66.667 0.00 0.00 39.27 6.86
407 408 2.740826 GTTAGCAAGTGGGCGCGA 60.741 61.111 12.10 0.00 39.27 5.87
408 409 2.106683 GTTAGCAAGTGGGCGCGAT 61.107 57.895 12.10 0.00 39.27 4.58
409 410 1.376683 TTAGCAAGTGGGCGCGATT 60.377 52.632 12.10 0.00 39.27 3.34
410 411 0.958382 TTAGCAAGTGGGCGCGATTT 60.958 50.000 12.10 0.00 39.27 2.17
411 412 1.643868 TAGCAAGTGGGCGCGATTTG 61.644 55.000 12.10 3.41 39.27 2.32
412 413 2.976840 GCAAGTGGGCGCGATTTGA 61.977 57.895 12.10 0.00 0.00 2.69
413 414 1.802636 CAAGTGGGCGCGATTTGAT 59.197 52.632 12.10 0.00 0.00 2.57
414 415 0.523968 CAAGTGGGCGCGATTTGATG 60.524 55.000 12.10 0.00 0.00 3.07
415 416 1.656818 AAGTGGGCGCGATTTGATGG 61.657 55.000 12.10 0.00 0.00 3.51
416 417 2.045438 TGGGCGCGATTTGATGGT 60.045 55.556 12.10 0.00 0.00 3.55
417 418 2.405805 TGGGCGCGATTTGATGGTG 61.406 57.895 12.10 0.00 0.00 4.17
418 419 2.406616 GGGCGCGATTTGATGGTGT 61.407 57.895 12.10 0.00 0.00 4.16
419 420 1.226379 GGCGCGATTTGATGGTGTG 60.226 57.895 12.10 0.00 0.00 3.82
420 421 1.501741 GCGCGATTTGATGGTGTGT 59.498 52.632 12.10 0.00 0.00 3.72
421 422 0.794229 GCGCGATTTGATGGTGTGTG 60.794 55.000 12.10 0.00 0.00 3.82
422 423 0.516877 CGCGATTTGATGGTGTGTGT 59.483 50.000 0.00 0.00 0.00 3.72
423 424 1.725611 CGCGATTTGATGGTGTGTGTG 60.726 52.381 0.00 0.00 0.00 3.82
424 425 1.535028 GCGATTTGATGGTGTGTGTGA 59.465 47.619 0.00 0.00 0.00 3.58
425 426 2.413239 GCGATTTGATGGTGTGTGTGAG 60.413 50.000 0.00 0.00 0.00 3.51
426 427 2.160219 CGATTTGATGGTGTGTGTGAGG 59.840 50.000 0.00 0.00 0.00 3.86
427 428 2.727123 TTTGATGGTGTGTGTGAGGT 57.273 45.000 0.00 0.00 0.00 3.85
428 429 2.727123 TTGATGGTGTGTGTGAGGTT 57.273 45.000 0.00 0.00 0.00 3.50
429 430 2.254546 TGATGGTGTGTGTGAGGTTC 57.745 50.000 0.00 0.00 0.00 3.62
430 431 1.488393 TGATGGTGTGTGTGAGGTTCA 59.512 47.619 0.00 0.00 0.00 3.18
431 432 2.092699 TGATGGTGTGTGTGAGGTTCAA 60.093 45.455 0.00 0.00 0.00 2.69
432 433 1.745232 TGGTGTGTGTGAGGTTCAAC 58.255 50.000 0.00 0.00 0.00 3.18
433 434 1.021968 GGTGTGTGTGAGGTTCAACC 58.978 55.000 0.00 0.00 38.99 3.77
434 435 0.655733 GTGTGTGTGAGGTTCAACCG 59.344 55.000 0.00 0.00 44.90 4.44
435 436 1.092921 TGTGTGTGAGGTTCAACCGC 61.093 55.000 2.78 2.78 44.90 5.68
436 437 1.525077 TGTGTGAGGTTCAACCGCC 60.525 57.895 7.97 1.41 44.90 6.13
437 438 1.227853 GTGTGAGGTTCAACCGCCT 60.228 57.895 7.97 0.00 44.90 5.52
438 439 0.034337 GTGTGAGGTTCAACCGCCTA 59.966 55.000 7.97 0.00 44.90 3.93
439 440 0.320374 TGTGAGGTTCAACCGCCTAG 59.680 55.000 7.97 0.00 44.90 3.02
440 441 0.391263 GTGAGGTTCAACCGCCTAGG 60.391 60.000 7.97 3.67 44.90 3.02
441 442 1.221021 GAGGTTCAACCGCCTAGGG 59.779 63.158 11.72 0.14 44.90 3.53
442 443 1.538135 AGGTTCAACCGCCTAGGGT 60.538 57.895 11.72 0.00 44.90 4.34
448 449 4.140354 ACCGCCTAGGGTTAGCAA 57.860 55.556 11.72 0.00 46.96 3.91
449 450 1.905512 ACCGCCTAGGGTTAGCAAG 59.094 57.895 11.72 0.00 46.96 4.01
450 451 0.908180 ACCGCCTAGGGTTAGCAAGT 60.908 55.000 11.72 0.00 46.96 3.16
451 452 0.462047 CCGCCTAGGGTTAGCAAGTG 60.462 60.000 11.72 0.00 35.97 3.16
452 453 0.462047 CGCCTAGGGTTAGCAAGTGG 60.462 60.000 11.72 0.00 0.00 4.00
453 454 0.107165 GCCTAGGGTTAGCAAGTGGG 60.107 60.000 11.72 0.00 0.00 4.61
454 455 1.286248 CCTAGGGTTAGCAAGTGGGT 58.714 55.000 0.00 0.00 0.00 4.51
455 456 1.065418 CCTAGGGTTAGCAAGTGGGTG 60.065 57.143 0.00 0.00 0.00 4.61
456 457 0.326927 TAGGGTTAGCAAGTGGGTGC 59.673 55.000 0.00 0.00 45.28 5.01
462 463 4.557942 GCAAGTGGGTGCGATTTG 57.442 55.556 0.00 0.00 34.21 2.32
463 464 1.956043 GCAAGTGGGTGCGATTTGA 59.044 52.632 0.00 0.00 34.21 2.69
464 465 0.527565 GCAAGTGGGTGCGATTTGAT 59.472 50.000 0.00 0.00 34.21 2.57
465 466 1.742831 GCAAGTGGGTGCGATTTGATA 59.257 47.619 0.00 0.00 34.21 2.15
466 467 2.223340 GCAAGTGGGTGCGATTTGATAG 60.223 50.000 0.00 0.00 34.21 2.08
467 468 3.009723 CAAGTGGGTGCGATTTGATAGT 58.990 45.455 0.00 0.00 0.00 2.12
468 469 2.632377 AGTGGGTGCGATTTGATAGTG 58.368 47.619 0.00 0.00 0.00 2.74
469 470 2.027192 AGTGGGTGCGATTTGATAGTGT 60.027 45.455 0.00 0.00 0.00 3.55
470 471 2.095853 GTGGGTGCGATTTGATAGTGTG 59.904 50.000 0.00 0.00 0.00 3.82
471 472 2.290008 TGGGTGCGATTTGATAGTGTGT 60.290 45.455 0.00 0.00 0.00 3.72
472 473 3.055747 TGGGTGCGATTTGATAGTGTGTA 60.056 43.478 0.00 0.00 0.00 2.90
473 474 4.127171 GGGTGCGATTTGATAGTGTGTAT 58.873 43.478 0.00 0.00 0.00 2.29
474 475 4.024893 GGGTGCGATTTGATAGTGTGTATG 60.025 45.833 0.00 0.00 0.00 2.39
475 476 4.808895 GGTGCGATTTGATAGTGTGTATGA 59.191 41.667 0.00 0.00 0.00 2.15
476 477 5.050769 GGTGCGATTTGATAGTGTGTATGAG 60.051 44.000 0.00 0.00 0.00 2.90
477 478 5.049828 TGCGATTTGATAGTGTGTATGAGG 58.950 41.667 0.00 0.00 0.00 3.86
478 479 5.050490 GCGATTTGATAGTGTGTATGAGGT 58.950 41.667 0.00 0.00 0.00 3.85
479 480 5.050769 GCGATTTGATAGTGTGTATGAGGTG 60.051 44.000 0.00 0.00 0.00 4.00
480 481 5.050769 CGATTTGATAGTGTGTATGAGGTGC 60.051 44.000 0.00 0.00 0.00 5.01
481 482 4.817318 TTGATAGTGTGTATGAGGTGCA 57.183 40.909 0.00 0.00 0.00 4.57
482 483 4.817318 TGATAGTGTGTATGAGGTGCAA 57.183 40.909 0.00 0.00 0.00 4.08
483 484 4.758688 TGATAGTGTGTATGAGGTGCAAG 58.241 43.478 0.00 0.00 0.00 4.01
484 485 2.479566 AGTGTGTATGAGGTGCAAGG 57.520 50.000 0.00 0.00 0.00 3.61
485 486 1.003580 AGTGTGTATGAGGTGCAAGGG 59.996 52.381 0.00 0.00 0.00 3.95
486 487 0.327924 TGTGTATGAGGTGCAAGGGG 59.672 55.000 0.00 0.00 0.00 4.79
487 488 0.394352 GTGTATGAGGTGCAAGGGGG 60.394 60.000 0.00 0.00 0.00 5.40
488 489 0.844661 TGTATGAGGTGCAAGGGGGT 60.845 55.000 0.00 0.00 0.00 4.95
489 490 0.394352 GTATGAGGTGCAAGGGGGTG 60.394 60.000 0.00 0.00 0.00 4.61
490 491 1.570857 TATGAGGTGCAAGGGGGTGG 61.571 60.000 0.00 0.00 0.00 4.61
491 492 4.366684 GAGGTGCAAGGGGGTGGG 62.367 72.222 0.00 0.00 0.00 4.61
501 502 3.318384 GGGGTGGGGCGCAATTTT 61.318 61.111 10.83 0.00 0.00 1.82
502 503 2.047370 GGGTGGGGCGCAATTTTG 60.047 61.111 10.83 0.00 0.00 2.44
503 504 2.047370 GGTGGGGCGCAATTTTGG 60.047 61.111 10.83 0.00 0.00 3.28
504 505 2.578714 GGTGGGGCGCAATTTTGGA 61.579 57.895 10.83 0.00 0.00 3.53
505 506 1.596408 GTGGGGCGCAATTTTGGAT 59.404 52.632 10.83 0.00 0.00 3.41
506 507 0.460109 GTGGGGCGCAATTTTGGATC 60.460 55.000 10.83 0.00 0.00 3.36
507 508 1.143838 GGGGCGCAATTTTGGATCC 59.856 57.895 10.83 4.20 0.00 3.36
508 509 1.226945 GGGCGCAATTTTGGATCCG 60.227 57.895 10.83 0.00 0.00 4.18
509 510 1.226945 GGCGCAATTTTGGATCCGG 60.227 57.895 10.83 0.00 0.00 5.14
510 511 1.662438 GGCGCAATTTTGGATCCGGA 61.662 55.000 6.61 6.61 0.00 5.14
511 512 0.172352 GCGCAATTTTGGATCCGGAA 59.828 50.000 9.01 4.60 0.00 4.30
512 513 1.202405 GCGCAATTTTGGATCCGGAAT 60.202 47.619 9.01 6.91 0.00 3.01
513 514 2.738321 GCGCAATTTTGGATCCGGAATT 60.738 45.455 9.01 15.65 0.00 2.17
514 515 3.520569 CGCAATTTTGGATCCGGAATTT 58.479 40.909 9.01 10.56 0.00 1.82
515 516 3.306703 CGCAATTTTGGATCCGGAATTTG 59.693 43.478 9.01 19.13 0.00 2.32
516 517 3.622612 GCAATTTTGGATCCGGAATTTGG 59.377 43.478 22.98 15.15 0.00 3.28
517 518 4.622695 GCAATTTTGGATCCGGAATTTGGA 60.623 41.667 22.98 3.16 40.46 3.53
518 519 5.111293 CAATTTTGGATCCGGAATTTGGAG 58.889 41.667 9.01 7.46 39.30 3.86
519 520 2.435372 TTGGATCCGGAATTTGGAGG 57.565 50.000 9.01 0.00 39.30 4.30
520 521 0.550914 TGGATCCGGAATTTGGAGGG 59.449 55.000 9.01 0.00 39.30 4.30
521 522 0.178990 GGATCCGGAATTTGGAGGGG 60.179 60.000 9.01 0.00 39.30 4.79
522 523 0.178990 GATCCGGAATTTGGAGGGGG 60.179 60.000 9.01 0.00 39.30 5.40
523 524 2.298335 ATCCGGAATTTGGAGGGGGC 62.298 60.000 9.01 0.00 39.30 5.80
524 525 2.828549 CGGAATTTGGAGGGGGCG 60.829 66.667 0.00 0.00 0.00 6.13
525 526 2.442087 GGAATTTGGAGGGGGCGG 60.442 66.667 0.00 0.00 0.00 6.13
526 527 2.442087 GAATTTGGAGGGGGCGGG 60.442 66.667 0.00 0.00 0.00 6.13
527 528 4.074408 AATTTGGAGGGGGCGGGG 62.074 66.667 0.00 0.00 0.00 5.73
543 544 4.265056 GGCGTGGTTGGGTCCAGT 62.265 66.667 0.00 0.00 38.23 4.00
544 545 2.978010 GCGTGGTTGGGTCCAGTG 60.978 66.667 0.00 0.00 38.23 3.66
545 546 2.281484 CGTGGTTGGGTCCAGTGG 60.281 66.667 1.40 1.40 38.23 4.00
546 547 2.597510 GTGGTTGGGTCCAGTGGC 60.598 66.667 3.51 0.00 38.23 5.01
547 548 3.099841 TGGTTGGGTCCAGTGGCA 61.100 61.111 3.51 0.00 33.19 4.92
548 549 2.282462 GGTTGGGTCCAGTGGCAG 60.282 66.667 3.51 0.00 0.00 4.85
549 550 2.985847 GTTGGGTCCAGTGGCAGC 60.986 66.667 3.51 3.27 0.00 5.25
550 551 3.177884 TTGGGTCCAGTGGCAGCT 61.178 61.111 3.51 0.00 0.00 4.24
551 552 2.766925 TTGGGTCCAGTGGCAGCTT 61.767 57.895 3.51 0.00 0.00 3.74
552 553 1.422977 TTGGGTCCAGTGGCAGCTTA 61.423 55.000 3.51 0.00 0.00 3.09
553 554 1.078143 GGGTCCAGTGGCAGCTTAG 60.078 63.158 3.51 0.00 0.00 2.18
554 555 1.078143 GGTCCAGTGGCAGCTTAGG 60.078 63.158 3.51 0.00 0.00 2.69
555 556 1.746991 GTCCAGTGGCAGCTTAGGC 60.747 63.158 3.51 0.00 39.06 3.93
585 586 9.942850 TTTTATCTAAGTCAATGACACATGAGA 57.057 29.630 16.38 9.99 34.60 3.27
586 587 8.932945 TTATCTAAGTCAATGACACATGAGAC 57.067 34.615 16.38 0.00 34.60 3.36
587 588 5.724328 TCTAAGTCAATGACACATGAGACC 58.276 41.667 16.38 0.00 34.60 3.85
588 589 4.630644 AAGTCAATGACACATGAGACCT 57.369 40.909 16.38 0.00 34.60 3.85
589 590 5.745312 AAGTCAATGACACATGAGACCTA 57.255 39.130 16.38 0.00 34.60 3.08
590 591 5.946942 AGTCAATGACACATGAGACCTAT 57.053 39.130 16.38 0.00 34.60 2.57
591 592 6.305272 AGTCAATGACACATGAGACCTATT 57.695 37.500 16.38 0.00 34.60 1.73
592 593 6.715280 AGTCAATGACACATGAGACCTATTT 58.285 36.000 16.38 0.00 34.60 1.40
593 594 6.596888 AGTCAATGACACATGAGACCTATTTG 59.403 38.462 16.38 0.00 34.60 2.32
594 595 6.595326 GTCAATGACACATGAGACCTATTTGA 59.405 38.462 8.74 0.00 32.09 2.69
595 596 7.281774 GTCAATGACACATGAGACCTATTTGAT 59.718 37.037 8.74 0.00 32.09 2.57
596 597 8.485392 TCAATGACACATGAGACCTATTTGATA 58.515 33.333 0.00 0.00 0.00 2.15
597 598 9.281371 CAATGACACATGAGACCTATTTGATAT 57.719 33.333 0.00 0.00 0.00 1.63
598 599 8.843885 ATGACACATGAGACCTATTTGATATG 57.156 34.615 0.00 0.00 0.00 1.78
599 600 7.219322 TGACACATGAGACCTATTTGATATGG 58.781 38.462 0.00 0.00 0.00 2.74
600 601 7.141758 ACACATGAGACCTATTTGATATGGT 57.858 36.000 0.00 0.00 35.23 3.55
601 602 7.577303 ACACATGAGACCTATTTGATATGGTT 58.423 34.615 0.00 0.00 32.30 3.67
602 603 8.713971 ACACATGAGACCTATTTGATATGGTTA 58.286 33.333 0.00 0.00 32.30 2.85
603 604 9.730705 CACATGAGACCTATTTGATATGGTTAT 57.269 33.333 0.00 0.00 32.30 1.89
621 622 8.857694 ATGGTTATTATTATACGGGTTTGAGG 57.142 34.615 0.00 0.00 0.00 3.86
622 623 7.225725 TGGTTATTATTATACGGGTTTGAGGG 58.774 38.462 0.00 0.00 0.00 4.30
623 624 7.147337 TGGTTATTATTATACGGGTTTGAGGGT 60.147 37.037 0.00 0.00 0.00 4.34
624 625 7.720957 GGTTATTATTATACGGGTTTGAGGGTT 59.279 37.037 0.00 0.00 0.00 4.11
625 626 9.123902 GTTATTATTATACGGGTTTGAGGGTTT 57.876 33.333 0.00 0.00 0.00 3.27
626 627 7.576861 ATTATTATACGGGTTTGAGGGTTTG 57.423 36.000 0.00 0.00 0.00 2.93
627 628 1.541379 ATACGGGTTTGAGGGTTTGC 58.459 50.000 0.00 0.00 0.00 3.68
628 629 0.183014 TACGGGTTTGAGGGTTTGCA 59.817 50.000 0.00 0.00 0.00 4.08
629 630 0.469144 ACGGGTTTGAGGGTTTGCAT 60.469 50.000 0.00 0.00 0.00 3.96
630 631 0.038343 CGGGTTTGAGGGTTTGCATG 60.038 55.000 0.00 0.00 0.00 4.06
631 632 1.047801 GGGTTTGAGGGTTTGCATGT 58.952 50.000 0.00 0.00 0.00 3.21
632 633 2.243810 GGGTTTGAGGGTTTGCATGTA 58.756 47.619 0.00 0.00 0.00 2.29
633 634 2.831526 GGGTTTGAGGGTTTGCATGTAT 59.168 45.455 0.00 0.00 0.00 2.29
634 635 3.368323 GGGTTTGAGGGTTTGCATGTATG 60.368 47.826 0.00 0.00 0.00 2.39
635 636 3.368323 GGTTTGAGGGTTTGCATGTATGG 60.368 47.826 0.00 0.00 0.00 2.74
636 637 2.142356 TGAGGGTTTGCATGTATGGG 57.858 50.000 0.00 0.00 0.00 4.00
637 638 1.357420 TGAGGGTTTGCATGTATGGGT 59.643 47.619 0.00 0.00 0.00 4.51
638 639 2.578480 TGAGGGTTTGCATGTATGGGTA 59.422 45.455 0.00 0.00 0.00 3.69
639 640 3.204158 TGAGGGTTTGCATGTATGGGTAT 59.796 43.478 0.00 0.00 0.00 2.73
640 641 4.215109 GAGGGTTTGCATGTATGGGTATT 58.785 43.478 0.00 0.00 0.00 1.89
641 642 3.960102 AGGGTTTGCATGTATGGGTATTG 59.040 43.478 0.00 0.00 0.00 1.90
642 643 3.492482 GGGTTTGCATGTATGGGTATTGC 60.492 47.826 0.00 0.00 0.00 3.56
643 644 3.492482 GGTTTGCATGTATGGGTATTGCC 60.492 47.826 0.00 0.00 32.39 4.52
644 645 3.311167 TTGCATGTATGGGTATTGCCT 57.689 42.857 0.00 0.00 37.43 4.75
645 646 3.311167 TGCATGTATGGGTATTGCCTT 57.689 42.857 0.00 0.00 37.43 4.35
646 647 3.221771 TGCATGTATGGGTATTGCCTTC 58.778 45.455 0.00 0.00 37.43 3.46
647 648 2.558359 GCATGTATGGGTATTGCCTTCC 59.442 50.000 0.00 0.00 37.43 3.46
648 649 3.157087 CATGTATGGGTATTGCCTTCCC 58.843 50.000 0.00 0.00 41.41 3.97
653 654 1.497286 TGGGTATTGCCTTCCCATACC 59.503 52.381 0.00 0.00 45.19 2.73
654 655 1.203013 GGGTATTGCCTTCCCATACCC 60.203 57.143 10.22 10.22 46.82 3.69
655 656 1.544759 GGTATTGCCTTCCCATACCCG 60.545 57.143 0.00 0.00 33.07 5.28
656 657 1.142262 GTATTGCCTTCCCATACCCGT 59.858 52.381 0.00 0.00 0.00 5.28
657 658 1.513858 ATTGCCTTCCCATACCCGTA 58.486 50.000 0.00 0.00 0.00 4.02
658 659 0.542805 TTGCCTTCCCATACCCGTAC 59.457 55.000 0.00 0.00 0.00 3.67
659 660 1.339644 TGCCTTCCCATACCCGTACC 61.340 60.000 0.00 0.00 0.00 3.34
660 661 2.048419 GCCTTCCCATACCCGTACCC 62.048 65.000 0.00 0.00 0.00 3.69
661 662 1.744014 CTTCCCATACCCGTACCCG 59.256 63.158 0.00 0.00 0.00 5.28
662 663 2.373434 CTTCCCATACCCGTACCCGC 62.373 65.000 0.00 0.00 0.00 6.13
663 664 3.932483 CCCATACCCGTACCCGCC 61.932 72.222 0.00 0.00 0.00 6.13
664 665 2.841044 CCATACCCGTACCCGCCT 60.841 66.667 0.00 0.00 0.00 5.52
665 666 1.531365 CCATACCCGTACCCGCCTA 60.531 63.158 0.00 0.00 0.00 3.93
666 667 1.114722 CCATACCCGTACCCGCCTAA 61.115 60.000 0.00 0.00 0.00 2.69
667 668 0.032540 CATACCCGTACCCGCCTAAC 59.967 60.000 0.00 0.00 0.00 2.34
668 669 1.115326 ATACCCGTACCCGCCTAACC 61.115 60.000 0.00 0.00 0.00 2.85
669 670 3.853487 CCCGTACCCGCCTAACCC 61.853 72.222 0.00 0.00 0.00 4.11
670 671 3.076278 CCGTACCCGCCTAACCCA 61.076 66.667 0.00 0.00 0.00 4.51
671 672 2.437396 CCGTACCCGCCTAACCCAT 61.437 63.158 0.00 0.00 0.00 4.00
672 673 1.523524 CGTACCCGCCTAACCCATT 59.476 57.895 0.00 0.00 0.00 3.16
673 674 0.752054 CGTACCCGCCTAACCCATTA 59.248 55.000 0.00 0.00 0.00 1.90
674 675 1.269936 CGTACCCGCCTAACCCATTAG 60.270 57.143 0.00 0.00 38.04 1.73
755 756 9.991906 TTCTATTAGGGTTTTTATATCTGTCGG 57.008 33.333 0.00 0.00 0.00 4.79
756 757 8.591072 TCTATTAGGGTTTTTATATCTGTCGGG 58.409 37.037 0.00 0.00 0.00 5.14
757 758 6.564557 TTAGGGTTTTTATATCTGTCGGGT 57.435 37.500 0.00 0.00 0.00 5.28
758 759 5.446260 AGGGTTTTTATATCTGTCGGGTT 57.554 39.130 0.00 0.00 0.00 4.11
759 760 5.434408 AGGGTTTTTATATCTGTCGGGTTC 58.566 41.667 0.00 0.00 0.00 3.62
760 761 4.271776 GGGTTTTTATATCTGTCGGGTTCG 59.728 45.833 0.00 0.00 37.82 3.95
761 762 4.260497 GGTTTTTATATCTGTCGGGTTCGC 60.260 45.833 0.00 0.00 36.13 4.70
762 763 3.804786 TTTATATCTGTCGGGTTCGCA 57.195 42.857 0.00 0.00 36.13 5.10
763 764 3.364889 TTATATCTGTCGGGTTCGCAG 57.635 47.619 0.00 0.00 39.80 5.18
764 765 0.389391 ATATCTGTCGGGTTCGCAGG 59.611 55.000 0.00 0.00 39.32 4.85
765 766 0.968901 TATCTGTCGGGTTCGCAGGT 60.969 55.000 0.00 0.00 39.32 4.00
766 767 0.968901 ATCTGTCGGGTTCGCAGGTA 60.969 55.000 0.00 0.00 39.32 3.08
767 768 1.153823 CTGTCGGGTTCGCAGGTAG 60.154 63.158 0.00 0.00 37.10 3.18
768 769 2.508663 GTCGGGTTCGCAGGTAGC 60.509 66.667 0.00 0.00 40.87 3.58
777 778 2.412112 GCAGGTAGCGGGTACTCG 59.588 66.667 11.78 11.78 0.00 4.18
778 779 2.413142 GCAGGTAGCGGGTACTCGT 61.413 63.158 17.95 6.24 0.00 4.18
779 780 1.941999 GCAGGTAGCGGGTACTCGTT 61.942 60.000 17.95 14.05 0.00 3.85
780 781 0.179145 CAGGTAGCGGGTACTCGTTG 60.179 60.000 17.95 4.37 0.00 4.10
781 782 1.517913 GGTAGCGGGTACTCGTTGC 60.518 63.158 17.95 14.57 0.00 4.17
782 783 1.517913 GTAGCGGGTACTCGTTGCC 60.518 63.158 17.95 2.29 0.00 4.52
783 784 1.978080 TAGCGGGTACTCGTTGCCA 60.978 57.895 17.95 0.00 0.00 4.92
784 785 1.324740 TAGCGGGTACTCGTTGCCAT 61.325 55.000 17.95 0.00 0.00 4.40
785 786 2.461110 GCGGGTACTCGTTGCCATG 61.461 63.158 17.95 0.00 0.00 3.66
786 787 1.079405 CGGGTACTCGTTGCCATGT 60.079 57.895 7.07 0.00 0.00 3.21
787 788 0.672401 CGGGTACTCGTTGCCATGTT 60.672 55.000 7.07 0.00 0.00 2.71
788 789 0.802494 GGGTACTCGTTGCCATGTTG 59.198 55.000 0.00 0.00 0.00 3.33
789 790 1.609580 GGGTACTCGTTGCCATGTTGA 60.610 52.381 0.00 0.00 0.00 3.18
790 791 1.732259 GGTACTCGTTGCCATGTTGAG 59.268 52.381 0.00 0.00 0.00 3.02
791 792 1.128692 GTACTCGTTGCCATGTTGAGC 59.871 52.381 0.00 0.00 0.00 4.26
792 793 1.237285 ACTCGTTGCCATGTTGAGCC 61.237 55.000 0.00 0.00 0.00 4.70
793 794 2.176546 CGTTGCCATGTTGAGCCG 59.823 61.111 0.00 0.00 0.00 5.52
794 795 2.616330 CGTTGCCATGTTGAGCCGT 61.616 57.895 0.00 0.00 0.00 5.68
795 796 1.210155 GTTGCCATGTTGAGCCGTC 59.790 57.895 0.00 0.00 0.00 4.79
796 797 1.971167 TTGCCATGTTGAGCCGTCC 60.971 57.895 0.00 0.00 0.00 4.79
797 798 2.359850 GCCATGTTGAGCCGTCCA 60.360 61.111 0.00 0.00 0.00 4.02
798 799 1.750399 GCCATGTTGAGCCGTCCAT 60.750 57.895 0.00 0.00 0.00 3.41
799 800 1.718757 GCCATGTTGAGCCGTCCATC 61.719 60.000 0.00 0.00 0.00 3.51
800 801 1.431488 CCATGTTGAGCCGTCCATCG 61.431 60.000 0.00 0.00 39.52 3.84
801 802 1.815421 ATGTTGAGCCGTCCATCGC 60.815 57.895 0.00 0.00 38.35 4.58
802 803 3.195698 GTTGAGCCGTCCATCGCC 61.196 66.667 0.00 0.00 38.35 5.54
803 804 3.700970 TTGAGCCGTCCATCGCCA 61.701 61.111 0.00 0.00 38.35 5.69
804 805 3.950794 TTGAGCCGTCCATCGCCAC 62.951 63.158 0.00 0.00 38.35 5.01
809 810 4.082523 CGTCCATCGCCACCACCT 62.083 66.667 0.00 0.00 0.00 4.00
810 811 2.125106 GTCCATCGCCACCACCTC 60.125 66.667 0.00 0.00 0.00 3.85
811 812 3.399181 TCCATCGCCACCACCTCC 61.399 66.667 0.00 0.00 0.00 4.30
812 813 4.489771 CCATCGCCACCACCTCCC 62.490 72.222 0.00 0.00 0.00 4.30
813 814 3.402681 CATCGCCACCACCTCCCT 61.403 66.667 0.00 0.00 0.00 4.20
814 815 3.402681 ATCGCCACCACCTCCCTG 61.403 66.667 0.00 0.00 0.00 4.45
815 816 4.954118 TCGCCACCACCTCCCTGT 62.954 66.667 0.00 0.00 0.00 4.00
816 817 4.704833 CGCCACCACCTCCCTGTG 62.705 72.222 0.00 0.00 35.98 3.66
817 818 3.570212 GCCACCACCTCCCTGTGT 61.570 66.667 0.00 0.00 34.35 3.72
818 819 2.221299 GCCACCACCTCCCTGTGTA 61.221 63.158 0.00 0.00 34.35 2.90
901 902 2.701107 AGAAAGAAAAGCTAGCCGACC 58.299 47.619 12.13 0.00 0.00 4.79
905 906 3.971109 AAAAGCTAGCCGACCCGCC 62.971 63.158 12.13 0.00 0.00 6.13
967 972 1.271108 ACACAGACGAGAGCAGAGAGA 60.271 52.381 0.00 0.00 0.00 3.10
968 973 1.398041 CACAGACGAGAGCAGAGAGAG 59.602 57.143 0.00 0.00 0.00 3.20
969 974 0.378257 CAGACGAGAGCAGAGAGAGC 59.622 60.000 0.00 0.00 0.00 4.09
970 975 0.748005 AGACGAGAGCAGAGAGAGCC 60.748 60.000 0.00 0.00 0.00 4.70
972 977 1.031571 ACGAGAGCAGAGAGAGCCAG 61.032 60.000 0.00 0.00 0.00 4.85
973 978 0.747644 CGAGAGCAGAGAGAGCCAGA 60.748 60.000 0.00 0.00 0.00 3.86
978 983 1.284785 AGCAGAGAGAGCCAGACTAGT 59.715 52.381 0.00 0.00 0.00 2.57
986 993 2.409651 CCAGACTAGTCCGAGCGC 59.590 66.667 19.38 0.00 0.00 5.92
1063 1070 4.154347 GGGAGGAGCACTGCGAGG 62.154 72.222 0.00 0.00 38.63 4.63
1521 1528 2.365768 GTGGAGGAGGGGGAGGAC 60.366 72.222 0.00 0.00 0.00 3.85
1735 1742 3.379445 CCTCGCCGGTGTAGTGGT 61.379 66.667 16.01 0.00 0.00 4.16
1736 1743 2.048023 CCTCGCCGGTGTAGTGGTA 61.048 63.158 16.01 0.00 0.00 3.25
1737 1744 1.432251 CTCGCCGGTGTAGTGGTAG 59.568 63.158 16.01 0.00 0.00 3.18
1739 1746 2.186125 GCCGGTGTAGTGGTAGCC 59.814 66.667 1.90 0.00 0.00 3.93
1740 1747 2.652095 GCCGGTGTAGTGGTAGCCA 61.652 63.158 1.90 0.00 0.00 4.75
1755 1762 3.470888 CCACTAGGCTCCCCGTGG 61.471 72.222 9.72 9.72 38.56 4.94
1756 1763 2.683933 CACTAGGCTCCCCGTGGT 60.684 66.667 0.00 0.00 35.76 4.16
1757 1764 2.122056 ACTAGGCTCCCCGTGGTT 59.878 61.111 0.00 0.00 35.76 3.67
1758 1765 2.291043 ACTAGGCTCCCCGTGGTTG 61.291 63.158 0.00 0.00 35.76 3.77
1759 1766 3.682292 CTAGGCTCCCCGTGGTTGC 62.682 68.421 0.00 0.00 35.76 4.17
1763 1770 4.722700 CTCCCCGTGGTTGCCTGG 62.723 72.222 0.00 0.00 0.00 4.45
1767 1774 3.953775 CCGTGGTTGCCTGGTCCT 61.954 66.667 0.00 0.00 0.00 3.85
1770 1777 1.302832 GTGGTTGCCTGGTCCTCTG 60.303 63.158 0.00 0.00 0.00 3.35
1772 1779 1.003233 GGTTGCCTGGTCCTCTGTC 60.003 63.158 0.00 0.00 0.00 3.51
1773 1780 1.003233 GTTGCCTGGTCCTCTGTCC 60.003 63.158 0.00 0.00 0.00 4.02
1780 1788 2.450243 GTCCTCTGTCCCCCTCCA 59.550 66.667 0.00 0.00 0.00 3.86
1783 1791 0.621571 TCCTCTGTCCCCCTCCATTG 60.622 60.000 0.00 0.00 0.00 2.82
1784 1792 1.639635 CCTCTGTCCCCCTCCATTGG 61.640 65.000 0.00 0.00 0.00 3.16
1786 1794 0.914417 TCTGTCCCCCTCCATTGGTC 60.914 60.000 1.86 0.00 0.00 4.02
1787 1795 0.916358 CTGTCCCCCTCCATTGGTCT 60.916 60.000 1.86 0.00 0.00 3.85
1790 1798 2.124570 CCCCTCCATTGGTCTGCG 60.125 66.667 1.86 0.00 0.00 5.18
1791 1799 2.825836 CCCTCCATTGGTCTGCGC 60.826 66.667 0.00 0.00 0.00 6.09
1793 1806 2.110967 CCTCCATTGGTCTGCGCAG 61.111 63.158 31.53 31.53 0.00 5.18
1905 1936 3.554934 AGCTTTGAGTGAACATGGACAA 58.445 40.909 0.00 0.00 0.00 3.18
1909 1940 5.618640 GCTTTGAGTGAACATGGACAAGATC 60.619 44.000 0.00 0.00 0.00 2.75
1910 1941 4.897509 TGAGTGAACATGGACAAGATCT 57.102 40.909 0.00 0.00 0.00 2.75
1911 1942 4.825422 TGAGTGAACATGGACAAGATCTC 58.175 43.478 0.00 1.03 0.00 2.75
1912 1943 4.187694 GAGTGAACATGGACAAGATCTCC 58.812 47.826 0.00 0.00 0.00 3.71
1913 1944 3.584406 AGTGAACATGGACAAGATCTCCA 59.416 43.478 4.76 4.76 42.17 3.86
1916 1947 3.623906 ACATGGACAAGATCTCCACTG 57.376 47.619 4.39 7.15 40.73 3.66
1932 1963 1.132834 CACTGCACTGCACTGTTTGAA 59.867 47.619 0.00 0.00 33.79 2.69
2040 2112 0.315251 TCGGATCCATCGCTCATGAC 59.685 55.000 13.41 0.00 33.80 3.06
2042 2114 1.541588 CGGATCCATCGCTCATGACTA 59.458 52.381 13.41 0.00 33.80 2.59
2079 2179 1.165270 ATCTGGTGCAAAGCGTAACC 58.835 50.000 0.00 0.00 0.00 2.85
2095 2195 4.217111 CCGCGCGCGCTGAATTTA 62.217 61.111 45.97 0.00 39.32 1.40
2096 2196 3.005794 CGCGCGCGCTGAATTTAC 61.006 61.111 45.97 19.75 39.32 2.01
2097 2197 2.399611 GCGCGCGCTGAATTTACT 59.600 55.556 44.38 0.00 38.26 2.24
2098 2198 1.648460 GCGCGCGCTGAATTTACTC 60.648 57.895 44.38 13.88 38.26 2.59
2100 2200 1.197055 CGCGCGCTGAATTTACTCTA 58.803 50.000 30.48 0.00 0.00 2.43
2108 2273 5.522460 GCGCTGAATTTACTCTAATGTGGTA 59.478 40.000 0.00 0.00 0.00 3.25
2150 2315 4.671377 TGCAATTCATCCTAAAACGATGC 58.329 39.130 0.00 0.00 37.60 3.91
2179 2351 0.723981 GAGCCGACTGCATTGTCTTC 59.276 55.000 4.76 0.00 44.83 2.87
2227 2410 1.007118 TGATCCACCTGAGCTACCTCA 59.993 52.381 0.00 0.00 45.54 3.86
2247 2430 3.947279 CACGAGGTGTGCGTATTTG 57.053 52.632 0.00 0.00 42.70 2.32
2341 2525 6.311445 TCAGACTGAGAAATTAAGCGATGTTC 59.689 38.462 0.00 0.00 0.00 3.18
2402 2587 1.405526 GCGACTGGTTCCAATAGCTCA 60.406 52.381 0.00 0.00 0.00 4.26
2405 2590 3.430790 CGACTGGTTCCAATAGCTCATGA 60.431 47.826 0.00 0.00 0.00 3.07
2406 2591 4.125703 GACTGGTTCCAATAGCTCATGAG 58.874 47.826 18.84 18.84 0.00 2.90
2408 2593 4.125703 CTGGTTCCAATAGCTCATGAGTC 58.874 47.826 23.38 15.41 0.00 3.36
2409 2594 3.519107 TGGTTCCAATAGCTCATGAGTCA 59.481 43.478 23.38 12.14 0.00 3.41
2411 2596 4.514441 GGTTCCAATAGCTCATGAGTCATG 59.486 45.833 24.60 24.60 42.60 3.07
2413 2598 4.953667 TCCAATAGCTCATGAGTCATGAC 58.046 43.478 28.18 23.21 44.60 3.06
2416 2601 5.236695 CCAATAGCTCATGAGTCATGACTTG 59.763 44.000 28.18 22.64 44.60 3.16
2417 2602 3.977134 AGCTCATGAGTCATGACTTGT 57.023 42.857 28.18 17.32 44.60 3.16
2418 2603 3.597255 AGCTCATGAGTCATGACTTGTG 58.403 45.455 28.18 26.07 44.60 3.33
2419 2604 3.007723 AGCTCATGAGTCATGACTTGTGT 59.992 43.478 28.18 12.58 44.60 3.72
2420 2605 4.221482 AGCTCATGAGTCATGACTTGTGTA 59.779 41.667 28.18 16.89 44.60 2.90
2487 2750 9.155975 AGTGATAGCAAATTTACTTCTGTGTAG 57.844 33.333 0.00 0.00 0.00 2.74
2488 2751 8.936864 GTGATAGCAAATTTACTTCTGTGTAGT 58.063 33.333 0.00 0.00 0.00 2.73
2493 2756 9.420551 AGCAAATTTACTTCTGTGTAGTACTAC 57.579 33.333 23.58 23.58 36.63 2.73
2494 2757 9.420551 GCAAATTTACTTCTGTGTAGTACTACT 57.579 33.333 28.56 12.82 37.00 2.57
2510 2773 7.907214 AGTACTACTAAATTGCAAGGTCAAG 57.093 36.000 4.94 0.76 0.00 3.02
2527 2790 7.888250 AGGTCAAGTTTTCAGAAAAGAAGAT 57.112 32.000 8.67 0.00 0.00 2.40
2546 2869 8.246430 AGAAGATTATCATGAAACATTGGCAT 57.754 30.769 0.00 0.00 0.00 4.40
2552 2875 4.742417 TCATGAAACATTGGCATAAACCG 58.258 39.130 0.00 0.00 0.00 4.44
2569 2892 2.034879 CGAAGCCGAGTGCACCATT 61.035 57.895 14.63 1.01 44.83 3.16
2586 2909 3.012518 CCATTTTCAGTCTCGATTGCCT 58.987 45.455 0.00 0.00 0.00 4.75
2625 2957 3.817084 ACTACCTTGCTACGATGCGTATA 59.183 43.478 0.00 0.00 41.53 1.47
2655 2987 3.323751 AATTCAGGGTCAGCAAATTGC 57.676 42.857 10.41 10.41 45.46 3.56
2680 3012 1.338674 TGGAGACCAGTTTATGTGGCG 60.339 52.381 0.00 0.00 38.83 5.69
2731 3063 5.358298 AGAAATTAAACGTGCAACCTCTC 57.642 39.130 0.00 0.00 0.00 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 1.153449 TTGATGGACGGCGATGGAC 60.153 57.895 16.62 2.37 0.00 4.02
47 48 1.105167 CCTGCGGATGCCATGTTGAT 61.105 55.000 0.00 0.00 41.78 2.57
50 51 0.396139 AATCCTGCGGATGCCATGTT 60.396 50.000 10.25 0.00 42.27 2.71
51 52 0.396139 AAATCCTGCGGATGCCATGT 60.396 50.000 10.25 0.00 42.27 3.21
52 53 0.031585 CAAATCCTGCGGATGCCATG 59.968 55.000 10.25 5.24 42.27 3.66
53 54 1.111116 CCAAATCCTGCGGATGCCAT 61.111 55.000 10.25 0.00 42.27 4.40
55 56 2.492773 CCCAAATCCTGCGGATGCC 61.493 63.158 10.25 0.00 42.27 4.40
56 57 0.465460 TACCCAAATCCTGCGGATGC 60.465 55.000 10.25 0.00 42.27 3.91
57 58 1.881973 CATACCCAAATCCTGCGGATG 59.118 52.381 10.25 2.03 42.27 3.51
58 59 1.202927 CCATACCCAAATCCTGCGGAT 60.203 52.381 0.00 0.00 45.46 4.18
59 60 0.182537 CCATACCCAAATCCTGCGGA 59.817 55.000 0.00 0.00 35.55 5.54
60 61 0.182537 TCCATACCCAAATCCTGCGG 59.817 55.000 0.00 0.00 0.00 5.69
62 63 5.354234 CGTAATATCCATACCCAAATCCTGC 59.646 44.000 0.00 0.00 0.00 4.85
63 64 6.371548 CACGTAATATCCATACCCAAATCCTG 59.628 42.308 0.00 0.00 0.00 3.86
64 65 6.472887 CACGTAATATCCATACCCAAATCCT 58.527 40.000 0.00 0.00 0.00 3.24
66 67 5.123344 GGCACGTAATATCCATACCCAAATC 59.877 44.000 0.00 0.00 0.00 2.17
67 68 5.007682 GGCACGTAATATCCATACCCAAAT 58.992 41.667 0.00 0.00 0.00 2.32
68 69 4.391155 GGCACGTAATATCCATACCCAAA 58.609 43.478 0.00 0.00 0.00 3.28
69 70 3.244630 GGGCACGTAATATCCATACCCAA 60.245 47.826 0.00 0.00 34.82 4.12
70 71 2.303600 GGGCACGTAATATCCATACCCA 59.696 50.000 0.00 0.00 34.82 4.51
71 72 2.303600 TGGGCACGTAATATCCATACCC 59.696 50.000 0.00 0.00 35.29 3.69
72 73 3.688694 TGGGCACGTAATATCCATACC 57.311 47.619 0.00 0.00 0.00 2.73
73 74 6.701841 CAGATATGGGCACGTAATATCCATAC 59.298 42.308 13.13 9.39 41.49 2.39
74 75 6.685368 GCAGATATGGGCACGTAATATCCATA 60.685 42.308 13.20 13.20 42.45 2.74
75 76 5.674525 CAGATATGGGCACGTAATATCCAT 58.325 41.667 12.49 11.57 40.78 3.41
76 77 4.622933 GCAGATATGGGCACGTAATATCCA 60.623 45.833 12.49 6.56 34.98 3.41
77 78 3.871594 GCAGATATGGGCACGTAATATCC 59.128 47.826 12.49 2.13 34.98 2.59
78 79 4.503910 TGCAGATATGGGCACGTAATATC 58.496 43.478 0.00 9.83 34.58 1.63
79 80 4.551702 TGCAGATATGGGCACGTAATAT 57.448 40.909 0.00 0.00 34.58 1.28
81 82 2.928801 TGCAGATATGGGCACGTAAT 57.071 45.000 0.00 0.00 34.58 1.89
87 88 0.111061 GATGGGTGCAGATATGGGCA 59.889 55.000 0.00 0.00 37.77 5.36
88 89 0.403271 AGATGGGTGCAGATATGGGC 59.597 55.000 0.00 0.00 0.00 5.36
89 90 1.701292 TGAGATGGGTGCAGATATGGG 59.299 52.381 0.00 0.00 0.00 4.00
90 91 3.497103 TTGAGATGGGTGCAGATATGG 57.503 47.619 0.00 0.00 0.00 2.74
91 92 5.840243 TTTTTGAGATGGGTGCAGATATG 57.160 39.130 0.00 0.00 0.00 1.78
111 112 4.018490 GGTACGGGTATGGGTGAATTTTT 58.982 43.478 0.00 0.00 0.00 1.94
112 113 3.267551 AGGTACGGGTATGGGTGAATTTT 59.732 43.478 0.00 0.00 0.00 1.82
113 114 2.848071 AGGTACGGGTATGGGTGAATTT 59.152 45.455 0.00 0.00 0.00 1.82
114 115 2.171870 CAGGTACGGGTATGGGTGAATT 59.828 50.000 0.00 0.00 0.00 2.17
115 116 1.766496 CAGGTACGGGTATGGGTGAAT 59.234 52.381 0.00 0.00 0.00 2.57
116 117 1.196911 CAGGTACGGGTATGGGTGAA 58.803 55.000 0.00 0.00 0.00 3.18
117 118 0.041535 ACAGGTACGGGTATGGGTGA 59.958 55.000 0.00 0.00 0.00 4.02
118 119 1.410153 GTACAGGTACGGGTATGGGTG 59.590 57.143 0.00 0.00 0.00 4.61
119 120 1.689258 GGTACAGGTACGGGTATGGGT 60.689 57.143 3.70 0.00 36.94 4.51
120 121 1.043022 GGTACAGGTACGGGTATGGG 58.957 60.000 3.70 0.00 36.94 4.00
121 122 1.043022 GGGTACAGGTACGGGTATGG 58.957 60.000 3.70 0.00 36.94 2.74
122 123 1.410153 GTGGGTACAGGTACGGGTATG 59.590 57.143 3.70 0.00 36.94 2.39
123 124 1.780503 GTGGGTACAGGTACGGGTAT 58.219 55.000 3.70 0.00 36.94 2.73
124 125 0.679640 CGTGGGTACAGGTACGGGTA 60.680 60.000 3.70 0.00 36.94 3.69
125 126 1.978617 CGTGGGTACAGGTACGGGT 60.979 63.158 3.70 0.00 36.94 5.28
126 127 2.887360 CGTGGGTACAGGTACGGG 59.113 66.667 3.70 0.00 36.94 5.28
127 128 2.182537 GCGTGGGTACAGGTACGG 59.817 66.667 10.79 0.00 36.94 4.02
128 129 1.444895 GTGCGTGGGTACAGGTACG 60.445 63.158 3.70 0.71 38.08 3.67
129 130 1.079612 GGTGCGTGGGTACAGGTAC 60.080 63.158 0.93 0.93 44.07 3.34
130 131 2.638354 CGGTGCGTGGGTACAGGTA 61.638 63.158 0.00 0.00 35.03 3.08
131 132 3.998672 CGGTGCGTGGGTACAGGT 61.999 66.667 0.00 0.00 35.03 4.00
132 133 4.752879 CCGGTGCGTGGGTACAGG 62.753 72.222 0.00 0.00 37.71 4.00
133 134 4.752879 CCCGGTGCGTGGGTACAG 62.753 72.222 0.00 0.00 42.07 2.74
139 140 2.482333 TTTGAAACCCGGTGCGTGG 61.482 57.895 0.00 0.00 0.00 4.94
140 141 1.298788 GTTTGAAACCCGGTGCGTG 60.299 57.895 0.00 0.00 0.00 5.34
141 142 1.452470 AGTTTGAAACCCGGTGCGT 60.452 52.632 4.14 0.00 0.00 5.24
142 143 1.008995 CAGTTTGAAACCCGGTGCG 60.009 57.895 4.14 0.00 0.00 5.34
143 144 0.458260 AACAGTTTGAAACCCGGTGC 59.542 50.000 4.14 0.00 0.00 5.01
144 145 1.066454 GGAACAGTTTGAAACCCGGTG 59.934 52.381 4.14 0.00 0.00 4.94
145 146 1.395635 GGAACAGTTTGAAACCCGGT 58.604 50.000 4.14 0.00 0.00 5.28
146 147 0.671796 GGGAACAGTTTGAAACCCGG 59.328 55.000 4.14 0.00 0.00 5.73
148 149 1.395635 ACGGGAACAGTTTGAAACCC 58.604 50.000 4.14 0.00 0.00 4.11
149 150 3.610821 GCATACGGGAACAGTTTGAAACC 60.611 47.826 4.14 0.00 0.00 3.27
150 151 3.561503 GCATACGGGAACAGTTTGAAAC 58.438 45.455 0.00 0.00 0.00 2.78
151 152 2.224549 CGCATACGGGAACAGTTTGAAA 59.775 45.455 0.00 0.00 34.97 2.69
152 153 1.801771 CGCATACGGGAACAGTTTGAA 59.198 47.619 0.00 0.00 34.97 2.69
153 154 1.270412 ACGCATACGGGAACAGTTTGA 60.270 47.619 0.00 0.00 46.04 2.69
154 155 1.153353 ACGCATACGGGAACAGTTTG 58.847 50.000 0.00 0.00 46.04 2.93
155 156 2.340337 GTACGCATACGGGAACAGTTT 58.660 47.619 0.00 0.00 46.04 2.66
156 157 1.404583 GGTACGCATACGGGAACAGTT 60.405 52.381 0.00 0.00 46.04 3.16
157 158 0.174162 GGTACGCATACGGGAACAGT 59.826 55.000 0.00 0.00 46.04 3.55
158 159 0.529119 GGGTACGCATACGGGAACAG 60.529 60.000 4.83 0.00 46.04 3.16
159 160 1.516892 GGGTACGCATACGGGAACA 59.483 57.895 4.83 0.00 46.04 3.18
160 161 1.589727 CGGGTACGCATACGGGAAC 60.590 63.158 10.84 0.00 46.04 3.62
161 162 2.051518 ACGGGTACGCATACGGGAA 61.052 57.895 10.84 0.00 46.04 3.97
162 163 2.440065 ACGGGTACGCATACGGGA 60.440 61.111 10.84 0.00 46.04 5.14
163 164 2.278989 CACGGGTACGCATACGGG 60.279 66.667 10.84 0.00 46.04 5.28
164 165 2.278989 CCACGGGTACGCATACGG 60.279 66.667 10.84 0.52 46.04 4.02
165 166 2.278989 CCCACGGGTACGCATACG 60.279 66.667 10.84 1.28 46.04 3.06
181 182 4.259356 CACCTAGCTGGGTAGTTTTTACC 58.741 47.826 22.80 0.00 41.11 2.85
182 183 4.694037 CACACCTAGCTGGGTAGTTTTTAC 59.306 45.833 22.80 0.00 41.11 2.01
183 184 4.348754 ACACACCTAGCTGGGTAGTTTTTA 59.651 41.667 22.80 0.00 41.11 1.52
184 185 3.137728 ACACACCTAGCTGGGTAGTTTTT 59.862 43.478 22.80 6.51 41.11 1.94
185 186 2.709397 ACACACCTAGCTGGGTAGTTTT 59.291 45.455 22.80 8.73 41.11 2.43
186 187 2.335933 ACACACCTAGCTGGGTAGTTT 58.664 47.619 22.80 12.26 41.11 2.66
187 188 2.025636 ACACACCTAGCTGGGTAGTT 57.974 50.000 22.80 6.41 41.11 2.24
188 189 2.913603 TACACACCTAGCTGGGTAGT 57.086 50.000 22.80 23.34 41.11 2.73
189 190 3.031736 ACATACACACCTAGCTGGGTAG 58.968 50.000 22.80 18.98 41.11 3.18
190 191 3.110293 ACATACACACCTAGCTGGGTA 57.890 47.619 22.80 6.68 41.11 3.69
191 192 1.952621 ACATACACACCTAGCTGGGT 58.047 50.000 17.38 17.38 41.11 4.51
192 193 3.009723 CAAACATACACACCTAGCTGGG 58.990 50.000 15.72 15.72 41.11 4.45
193 194 3.935203 CTCAAACATACACACCTAGCTGG 59.065 47.826 0.00 0.00 42.93 4.85
194 195 3.372206 GCTCAAACATACACACCTAGCTG 59.628 47.826 0.00 0.00 0.00 4.24
195 196 3.007940 TGCTCAAACATACACACCTAGCT 59.992 43.478 0.00 0.00 0.00 3.32
196 197 3.334691 TGCTCAAACATACACACCTAGC 58.665 45.455 0.00 0.00 0.00 3.42
197 198 6.500684 AAATGCTCAAACATACACACCTAG 57.499 37.500 0.00 0.00 0.00 3.02
198 199 6.937465 TGTAAATGCTCAAACATACACACCTA 59.063 34.615 0.00 0.00 0.00 3.08
199 200 5.767665 TGTAAATGCTCAAACATACACACCT 59.232 36.000 0.00 0.00 0.00 4.00
200 201 6.007936 TGTAAATGCTCAAACATACACACC 57.992 37.500 0.00 0.00 0.00 4.16
201 202 8.519492 AAATGTAAATGCTCAAACATACACAC 57.481 30.769 0.00 0.00 32.44 3.82
202 203 9.190858 GAAAATGTAAATGCTCAAACATACACA 57.809 29.630 0.00 0.00 32.44 3.72
203 204 8.365210 CGAAAATGTAAATGCTCAAACATACAC 58.635 33.333 0.00 0.00 32.44 2.90
204 205 8.079203 ACGAAAATGTAAATGCTCAAACATACA 58.921 29.630 0.00 0.00 32.44 2.29
205 206 8.447787 ACGAAAATGTAAATGCTCAAACATAC 57.552 30.769 0.00 0.00 32.44 2.39
207 208 9.638239 AATACGAAAATGTAAATGCTCAAACAT 57.362 25.926 0.00 0.00 34.11 2.71
208 209 9.469807 AAATACGAAAATGTAAATGCTCAAACA 57.530 25.926 0.00 0.00 0.00 2.83
211 212 9.684448 TCAAAATACGAAAATGTAAATGCTCAA 57.316 25.926 0.00 0.00 0.00 3.02
212 213 9.123709 GTCAAAATACGAAAATGTAAATGCTCA 57.876 29.630 0.00 0.00 0.00 4.26
213 214 9.123709 TGTCAAAATACGAAAATGTAAATGCTC 57.876 29.630 0.00 0.00 0.00 4.26
214 215 8.911662 GTGTCAAAATACGAAAATGTAAATGCT 58.088 29.630 0.00 0.00 0.00 3.79
215 216 8.695284 TGTGTCAAAATACGAAAATGTAAATGC 58.305 29.630 0.00 0.00 0.00 3.56
224 225 9.605955 CTGTCAATATGTGTCAAAATACGAAAA 57.394 29.630 0.00 0.00 0.00 2.29
225 226 7.748683 GCTGTCAATATGTGTCAAAATACGAAA 59.251 33.333 0.00 0.00 0.00 3.46
226 227 7.095017 TGCTGTCAATATGTGTCAAAATACGAA 60.095 33.333 0.00 0.00 0.00 3.85
227 228 6.370166 TGCTGTCAATATGTGTCAAAATACGA 59.630 34.615 0.00 0.00 0.00 3.43
228 229 6.541969 TGCTGTCAATATGTGTCAAAATACG 58.458 36.000 0.00 0.00 0.00 3.06
229 230 8.400947 AGATGCTGTCAATATGTGTCAAAATAC 58.599 33.333 0.00 0.00 0.00 1.89
230 231 8.510243 AGATGCTGTCAATATGTGTCAAAATA 57.490 30.769 0.00 0.00 0.00 1.40
231 232 7.121611 TGAGATGCTGTCAATATGTGTCAAAAT 59.878 33.333 0.00 0.00 0.00 1.82
232 233 6.430616 TGAGATGCTGTCAATATGTGTCAAAA 59.569 34.615 0.00 0.00 0.00 2.44
233 234 5.939296 TGAGATGCTGTCAATATGTGTCAAA 59.061 36.000 0.00 0.00 0.00 2.69
234 235 5.490159 TGAGATGCTGTCAATATGTGTCAA 58.510 37.500 0.00 0.00 0.00 3.18
235 236 5.088680 TGAGATGCTGTCAATATGTGTCA 57.911 39.130 0.00 0.00 0.00 3.58
236 237 5.352293 TGTTGAGATGCTGTCAATATGTGTC 59.648 40.000 0.33 0.00 36.35 3.67
237 238 5.122869 GTGTTGAGATGCTGTCAATATGTGT 59.877 40.000 0.33 0.00 36.35 3.72
238 239 5.122711 TGTGTTGAGATGCTGTCAATATGTG 59.877 40.000 0.33 0.00 36.35 3.21
239 240 5.247862 TGTGTTGAGATGCTGTCAATATGT 58.752 37.500 0.33 0.00 36.35 2.29
240 241 5.806366 TGTGTTGAGATGCTGTCAATATG 57.194 39.130 0.33 0.00 36.35 1.78
241 242 7.049754 TGTATGTGTTGAGATGCTGTCAATAT 58.950 34.615 0.33 0.37 36.35 1.28
242 243 6.405538 TGTATGTGTTGAGATGCTGTCAATA 58.594 36.000 0.33 0.00 36.35 1.90
243 244 5.247862 TGTATGTGTTGAGATGCTGTCAAT 58.752 37.500 0.33 0.00 36.35 2.57
244 245 4.640364 TGTATGTGTTGAGATGCTGTCAA 58.360 39.130 0.00 0.00 0.00 3.18
245 246 4.270245 TGTATGTGTTGAGATGCTGTCA 57.730 40.909 0.00 0.00 0.00 3.58
246 247 5.812127 TGTATGTATGTGTTGAGATGCTGTC 59.188 40.000 0.00 0.00 0.00 3.51
247 248 5.733676 TGTATGTATGTGTTGAGATGCTGT 58.266 37.500 0.00 0.00 0.00 4.40
248 249 6.667007 TTGTATGTATGTGTTGAGATGCTG 57.333 37.500 0.00 0.00 0.00 4.41
249 250 9.565090 AATATTGTATGTATGTGTTGAGATGCT 57.435 29.630 0.00 0.00 0.00 3.79
250 251 9.817365 GAATATTGTATGTATGTGTTGAGATGC 57.183 33.333 0.00 0.00 0.00 3.91
255 256 9.844257 TGATGGAATATTGTATGTATGTGTTGA 57.156 29.630 0.00 0.00 0.00 3.18
256 257 9.882996 GTGATGGAATATTGTATGTATGTGTTG 57.117 33.333 0.00 0.00 0.00 3.33
257 258 9.625747 TGTGATGGAATATTGTATGTATGTGTT 57.374 29.630 0.00 0.00 0.00 3.32
258 259 9.797642 ATGTGATGGAATATTGTATGTATGTGT 57.202 29.630 0.00 0.00 0.00 3.72
264 265 9.905713 GGGTATATGTGATGGAATATTGTATGT 57.094 33.333 0.00 0.00 0.00 2.29
265 266 9.904198 TGGGTATATGTGATGGAATATTGTATG 57.096 33.333 0.00 0.00 0.00 2.39
268 269 8.839745 AGATGGGTATATGTGATGGAATATTGT 58.160 33.333 0.00 0.00 0.00 2.71
271 272 9.163894 CCTAGATGGGTATATGTGATGGAATAT 57.836 37.037 0.00 0.00 0.00 1.28
272 273 8.351414 TCCTAGATGGGTATATGTGATGGAATA 58.649 37.037 0.00 0.00 36.20 1.75
273 274 7.199048 TCCTAGATGGGTATATGTGATGGAAT 58.801 38.462 0.00 0.00 36.20 3.01
274 275 6.570680 TCCTAGATGGGTATATGTGATGGAA 58.429 40.000 0.00 0.00 36.20 3.53
275 276 6.010739 TCTCCTAGATGGGTATATGTGATGGA 60.011 42.308 0.00 0.00 36.20 3.41
276 277 6.197903 TCTCCTAGATGGGTATATGTGATGG 58.802 44.000 0.00 0.00 36.20 3.51
277 278 7.562821 TGATCTCCTAGATGGGTATATGTGATG 59.437 40.741 0.00 0.00 34.53 3.07
278 279 7.656354 TGATCTCCTAGATGGGTATATGTGAT 58.344 38.462 0.00 0.00 34.53 3.06
279 280 7.044496 TGATCTCCTAGATGGGTATATGTGA 57.956 40.000 0.00 0.00 34.53 3.58
280 281 6.323482 CCTGATCTCCTAGATGGGTATATGTG 59.677 46.154 0.00 0.00 34.53 3.21
281 282 6.220609 TCCTGATCTCCTAGATGGGTATATGT 59.779 42.308 0.00 0.00 34.53 2.29
282 283 6.677552 TCCTGATCTCCTAGATGGGTATATG 58.322 44.000 0.00 0.00 34.53 1.78
283 284 6.685147 TCTCCTGATCTCCTAGATGGGTATAT 59.315 42.308 0.00 0.00 34.53 0.86
284 285 6.039270 TCTCCTGATCTCCTAGATGGGTATA 58.961 44.000 0.00 0.00 34.53 1.47
285 286 4.860866 TCTCCTGATCTCCTAGATGGGTAT 59.139 45.833 0.00 0.00 34.53 2.73
286 287 4.252010 TCTCCTGATCTCCTAGATGGGTA 58.748 47.826 0.00 0.00 34.53 3.69
287 288 3.067470 TCTCCTGATCTCCTAGATGGGT 58.933 50.000 0.00 0.00 34.53 4.51
288 289 3.824001 TCTCCTGATCTCCTAGATGGG 57.176 52.381 0.00 0.00 34.53 4.00
289 290 4.088634 CCTTCTCCTGATCTCCTAGATGG 58.911 52.174 0.00 0.71 34.53 3.51
290 291 4.996793 TCCTTCTCCTGATCTCCTAGATG 58.003 47.826 0.00 0.00 34.53 2.90
291 292 4.509122 GCTCCTTCTCCTGATCTCCTAGAT 60.509 50.000 0.00 0.00 37.73 1.98
292 293 3.181434 GCTCCTTCTCCTGATCTCCTAGA 60.181 52.174 0.00 0.00 0.00 2.43
293 294 3.157087 GCTCCTTCTCCTGATCTCCTAG 58.843 54.545 0.00 0.00 0.00 3.02
294 295 2.515853 TGCTCCTTCTCCTGATCTCCTA 59.484 50.000 0.00 0.00 0.00 2.94
295 296 1.290431 TGCTCCTTCTCCTGATCTCCT 59.710 52.381 0.00 0.00 0.00 3.69
296 297 1.688197 CTGCTCCTTCTCCTGATCTCC 59.312 57.143 0.00 0.00 0.00 3.71
297 298 1.688197 CCTGCTCCTTCTCCTGATCTC 59.312 57.143 0.00 0.00 0.00 2.75
298 299 1.792115 CCTGCTCCTTCTCCTGATCT 58.208 55.000 0.00 0.00 0.00 2.75
299 300 0.106521 GCCTGCTCCTTCTCCTGATC 59.893 60.000 0.00 0.00 0.00 2.92
300 301 1.344191 GGCCTGCTCCTTCTCCTGAT 61.344 60.000 0.00 0.00 0.00 2.90
301 302 1.992277 GGCCTGCTCCTTCTCCTGA 60.992 63.158 0.00 0.00 0.00 3.86
302 303 2.588989 GGCCTGCTCCTTCTCCTG 59.411 66.667 0.00 0.00 0.00 3.86
303 304 3.080121 CGGCCTGCTCCTTCTCCT 61.080 66.667 0.00 0.00 0.00 3.69
304 305 4.168291 CCGGCCTGCTCCTTCTCC 62.168 72.222 0.00 0.00 0.00 3.71
305 306 3.077556 TCCGGCCTGCTCCTTCTC 61.078 66.667 0.00 0.00 0.00 2.87
306 307 3.080121 CTCCGGCCTGCTCCTTCT 61.080 66.667 0.00 0.00 0.00 2.85
307 308 4.168291 CCTCCGGCCTGCTCCTTC 62.168 72.222 0.00 0.00 0.00 3.46
333 334 2.256158 GCTGCGTGCATGAAAGCA 59.744 55.556 22.30 14.01 43.35 3.91
334 335 2.872925 CGCTGCGTGCATGAAAGC 60.873 61.111 14.93 19.03 43.06 3.51
335 336 2.202388 CCGCTGCGTGCATGAAAG 60.202 61.111 21.59 7.39 43.06 2.62
336 337 4.403137 GCCGCTGCGTGCATGAAA 62.403 61.111 23.79 0.00 43.06 2.69
383 384 1.090052 CCCACTTGCTAACGCTAGGC 61.090 60.000 0.00 0.00 42.23 3.93
384 385 1.090052 GCCCACTTGCTAACGCTAGG 61.090 60.000 0.00 0.00 42.23 3.02
385 386 1.421410 CGCCCACTTGCTAACGCTAG 61.421 60.000 0.00 0.00 43.32 3.42
386 387 1.447140 CGCCCACTTGCTAACGCTA 60.447 57.895 0.00 0.00 36.97 4.26
387 388 2.742372 CGCCCACTTGCTAACGCT 60.742 61.111 0.00 0.00 36.97 5.07
388 389 4.460873 GCGCCCACTTGCTAACGC 62.461 66.667 0.00 0.00 39.49 4.84
389 390 4.147322 CGCGCCCACTTGCTAACG 62.147 66.667 0.00 0.00 0.00 3.18
390 391 1.644786 AATCGCGCCCACTTGCTAAC 61.645 55.000 0.00 0.00 0.00 2.34
391 392 0.958382 AAATCGCGCCCACTTGCTAA 60.958 50.000 0.00 0.00 0.00 3.09
392 393 1.376683 AAATCGCGCCCACTTGCTA 60.377 52.632 0.00 0.00 0.00 3.49
393 394 2.672996 AAATCGCGCCCACTTGCT 60.673 55.556 0.00 0.00 0.00 3.91
394 395 2.270297 ATCAAATCGCGCCCACTTGC 62.270 55.000 0.00 0.00 0.00 4.01
395 396 0.523968 CATCAAATCGCGCCCACTTG 60.524 55.000 0.00 0.45 0.00 3.16
396 397 1.656818 CCATCAAATCGCGCCCACTT 61.657 55.000 0.00 0.00 0.00 3.16
397 398 2.114670 CCATCAAATCGCGCCCACT 61.115 57.895 0.00 0.00 0.00 4.00
398 399 2.406616 ACCATCAAATCGCGCCCAC 61.407 57.895 0.00 0.00 0.00 4.61
399 400 2.045438 ACCATCAAATCGCGCCCA 60.045 55.556 0.00 0.00 0.00 5.36
400 401 2.406616 ACACCATCAAATCGCGCCC 61.407 57.895 0.00 0.00 0.00 6.13
401 402 1.226379 CACACCATCAAATCGCGCC 60.226 57.895 0.00 0.00 0.00 6.53
402 403 0.794229 CACACACCATCAAATCGCGC 60.794 55.000 0.00 0.00 0.00 6.86
403 404 0.516877 ACACACACCATCAAATCGCG 59.483 50.000 0.00 0.00 0.00 5.87
404 405 1.535028 TCACACACACCATCAAATCGC 59.465 47.619 0.00 0.00 0.00 4.58
405 406 2.160219 CCTCACACACACCATCAAATCG 59.840 50.000 0.00 0.00 0.00 3.34
406 407 3.149196 ACCTCACACACACCATCAAATC 58.851 45.455 0.00 0.00 0.00 2.17
407 408 3.228188 ACCTCACACACACCATCAAAT 57.772 42.857 0.00 0.00 0.00 2.32
408 409 2.727123 ACCTCACACACACCATCAAA 57.273 45.000 0.00 0.00 0.00 2.69
409 410 2.092699 TGAACCTCACACACACCATCAA 60.093 45.455 0.00 0.00 0.00 2.57
410 411 1.488393 TGAACCTCACACACACCATCA 59.512 47.619 0.00 0.00 0.00 3.07
411 412 2.254546 TGAACCTCACACACACCATC 57.745 50.000 0.00 0.00 0.00 3.51
412 413 2.297701 GTTGAACCTCACACACACCAT 58.702 47.619 0.00 0.00 0.00 3.55
413 414 1.680555 GGTTGAACCTCACACACACCA 60.681 52.381 7.20 0.00 34.73 4.17
414 415 1.021968 GGTTGAACCTCACACACACC 58.978 55.000 7.20 0.00 34.73 4.16
415 416 0.655733 CGGTTGAACCTCACACACAC 59.344 55.000 13.18 0.00 35.66 3.82
416 417 1.092921 GCGGTTGAACCTCACACACA 61.093 55.000 13.18 0.00 35.66 3.72
417 418 1.647084 GCGGTTGAACCTCACACAC 59.353 57.895 13.18 0.00 35.66 3.82
418 419 1.525077 GGCGGTTGAACCTCACACA 60.525 57.895 13.18 0.00 35.66 3.72
419 420 0.034337 TAGGCGGTTGAACCTCACAC 59.966 55.000 13.18 0.00 37.50 3.82
420 421 0.320374 CTAGGCGGTTGAACCTCACA 59.680 55.000 13.18 0.00 37.50 3.58
421 422 0.391263 CCTAGGCGGTTGAACCTCAC 60.391 60.000 13.18 2.35 37.50 3.51
422 423 1.550130 CCCTAGGCGGTTGAACCTCA 61.550 60.000 13.18 0.00 37.50 3.86
423 424 1.221021 CCCTAGGCGGTTGAACCTC 59.779 63.158 13.18 3.98 37.50 3.85
424 425 1.131928 AACCCTAGGCGGTTGAACCT 61.132 55.000 13.18 0.00 44.63 3.50
425 426 0.614812 TAACCCTAGGCGGTTGAACC 59.385 55.000 3.76 3.76 45.85 3.62
426 427 2.010544 GCTAACCCTAGGCGGTTGAAC 61.011 57.143 12.29 0.00 45.85 3.18
427 428 0.251073 GCTAACCCTAGGCGGTTGAA 59.749 55.000 12.29 0.00 45.85 2.69
428 429 0.905809 TGCTAACCCTAGGCGGTTGA 60.906 55.000 12.29 0.00 45.85 3.18
429 430 0.035820 TTGCTAACCCTAGGCGGTTG 60.036 55.000 12.29 3.65 45.85 3.77
431 432 0.908180 ACTTGCTAACCCTAGGCGGT 60.908 55.000 2.05 0.00 37.93 5.68
432 433 0.462047 CACTTGCTAACCCTAGGCGG 60.462 60.000 2.05 0.00 0.00 6.13
433 434 0.462047 CCACTTGCTAACCCTAGGCG 60.462 60.000 2.05 0.00 0.00 5.52
434 435 0.107165 CCCACTTGCTAACCCTAGGC 60.107 60.000 2.05 0.00 0.00 3.93
435 436 1.065418 CACCCACTTGCTAACCCTAGG 60.065 57.143 0.06 0.06 0.00 3.02
436 437 1.679032 GCACCCACTTGCTAACCCTAG 60.679 57.143 0.00 0.00 39.59 3.02
437 438 0.326927 GCACCCACTTGCTAACCCTA 59.673 55.000 0.00 0.00 39.59 3.53
438 439 1.074951 GCACCCACTTGCTAACCCT 59.925 57.895 0.00 0.00 39.59 4.34
439 440 2.332654 CGCACCCACTTGCTAACCC 61.333 63.158 0.00 0.00 40.62 4.11
440 441 0.676782 ATCGCACCCACTTGCTAACC 60.677 55.000 0.00 0.00 40.62 2.85
441 442 1.165270 AATCGCACCCACTTGCTAAC 58.835 50.000 0.00 0.00 40.62 2.34
442 443 1.539388 CAAATCGCACCCACTTGCTAA 59.461 47.619 0.00 0.00 40.62 3.09
443 444 1.164411 CAAATCGCACCCACTTGCTA 58.836 50.000 0.00 0.00 40.62 3.49
444 445 0.537143 TCAAATCGCACCCACTTGCT 60.537 50.000 0.00 0.00 40.62 3.91
445 446 0.527565 ATCAAATCGCACCCACTTGC 59.472 50.000 0.00 0.00 39.28 4.01
446 447 3.009723 ACTATCAAATCGCACCCACTTG 58.990 45.455 0.00 0.00 0.00 3.16
447 448 3.009723 CACTATCAAATCGCACCCACTT 58.990 45.455 0.00 0.00 0.00 3.16
448 449 2.027192 ACACTATCAAATCGCACCCACT 60.027 45.455 0.00 0.00 0.00 4.00
449 450 2.095853 CACACTATCAAATCGCACCCAC 59.904 50.000 0.00 0.00 0.00 4.61
450 451 2.290008 ACACACTATCAAATCGCACCCA 60.290 45.455 0.00 0.00 0.00 4.51
451 452 2.356135 ACACACTATCAAATCGCACCC 58.644 47.619 0.00 0.00 0.00 4.61
452 453 4.808895 TCATACACACTATCAAATCGCACC 59.191 41.667 0.00 0.00 0.00 5.01
453 454 5.050769 CCTCATACACACTATCAAATCGCAC 60.051 44.000 0.00 0.00 0.00 5.34
454 455 5.049828 CCTCATACACACTATCAAATCGCA 58.950 41.667 0.00 0.00 0.00 5.10
455 456 5.050490 ACCTCATACACACTATCAAATCGC 58.950 41.667 0.00 0.00 0.00 4.58
456 457 5.050769 GCACCTCATACACACTATCAAATCG 60.051 44.000 0.00 0.00 0.00 3.34
457 458 5.817296 TGCACCTCATACACACTATCAAATC 59.183 40.000 0.00 0.00 0.00 2.17
458 459 5.744171 TGCACCTCATACACACTATCAAAT 58.256 37.500 0.00 0.00 0.00 2.32
459 460 5.159273 TGCACCTCATACACACTATCAAA 57.841 39.130 0.00 0.00 0.00 2.69
460 461 4.817318 TGCACCTCATACACACTATCAA 57.183 40.909 0.00 0.00 0.00 2.57
461 462 4.383010 CCTTGCACCTCATACACACTATCA 60.383 45.833 0.00 0.00 0.00 2.15
462 463 4.122776 CCTTGCACCTCATACACACTATC 58.877 47.826 0.00 0.00 0.00 2.08
463 464 3.118261 CCCTTGCACCTCATACACACTAT 60.118 47.826 0.00 0.00 0.00 2.12
464 465 2.236146 CCCTTGCACCTCATACACACTA 59.764 50.000 0.00 0.00 0.00 2.74
465 466 1.003580 CCCTTGCACCTCATACACACT 59.996 52.381 0.00 0.00 0.00 3.55
466 467 1.453155 CCCTTGCACCTCATACACAC 58.547 55.000 0.00 0.00 0.00 3.82
467 468 0.327924 CCCCTTGCACCTCATACACA 59.672 55.000 0.00 0.00 0.00 3.72
468 469 0.394352 CCCCCTTGCACCTCATACAC 60.394 60.000 0.00 0.00 0.00 2.90
469 470 0.844661 ACCCCCTTGCACCTCATACA 60.845 55.000 0.00 0.00 0.00 2.29
470 471 0.394352 CACCCCCTTGCACCTCATAC 60.394 60.000 0.00 0.00 0.00 2.39
471 472 1.570857 CCACCCCCTTGCACCTCATA 61.571 60.000 0.00 0.00 0.00 2.15
472 473 2.765969 CACCCCCTTGCACCTCAT 59.234 61.111 0.00 0.00 0.00 2.90
473 474 3.579302 CCACCCCCTTGCACCTCA 61.579 66.667 0.00 0.00 0.00 3.86
474 475 4.366684 CCCACCCCCTTGCACCTC 62.367 72.222 0.00 0.00 0.00 3.85
484 485 3.318384 AAAATTGCGCCCCACCCC 61.318 61.111 4.18 0.00 0.00 4.95
485 486 2.047370 CAAAATTGCGCCCCACCC 60.047 61.111 4.18 0.00 0.00 4.61
486 487 1.898330 ATCCAAAATTGCGCCCCACC 61.898 55.000 4.18 0.00 0.00 4.61
487 488 0.460109 GATCCAAAATTGCGCCCCAC 60.460 55.000 4.18 0.00 0.00 4.61
488 489 1.612395 GGATCCAAAATTGCGCCCCA 61.612 55.000 6.95 0.00 0.00 4.96
489 490 1.143838 GGATCCAAAATTGCGCCCC 59.856 57.895 6.95 0.00 0.00 5.80
490 491 1.226945 CGGATCCAAAATTGCGCCC 60.227 57.895 13.41 0.00 0.00 6.13
491 492 1.226945 CCGGATCCAAAATTGCGCC 60.227 57.895 13.41 0.00 0.00 6.53
492 493 0.172352 TTCCGGATCCAAAATTGCGC 59.828 50.000 13.41 0.00 0.00 6.09
493 494 2.869233 ATTCCGGATCCAAAATTGCG 57.131 45.000 13.41 0.00 0.00 4.85
494 495 3.622612 CCAAATTCCGGATCCAAAATTGC 59.377 43.478 17.64 0.00 0.00 3.56
495 496 5.083533 TCCAAATTCCGGATCCAAAATTG 57.916 39.130 17.64 15.71 0.00 2.32
496 497 4.162131 CCTCCAAATTCCGGATCCAAAATT 59.838 41.667 13.41 13.27 0.00 1.82
497 498 3.706086 CCTCCAAATTCCGGATCCAAAAT 59.294 43.478 13.41 7.65 0.00 1.82
498 499 3.096092 CCTCCAAATTCCGGATCCAAAA 58.904 45.455 13.41 5.36 0.00 2.44
499 500 2.622977 CCCTCCAAATTCCGGATCCAAA 60.623 50.000 13.41 5.76 0.00 3.28
500 501 1.064017 CCCTCCAAATTCCGGATCCAA 60.064 52.381 13.41 0.00 0.00 3.53
501 502 0.550914 CCCTCCAAATTCCGGATCCA 59.449 55.000 13.41 0.00 0.00 3.41
502 503 0.178990 CCCCTCCAAATTCCGGATCC 60.179 60.000 4.15 0.00 0.00 3.36
503 504 0.178990 CCCCCTCCAAATTCCGGATC 60.179 60.000 4.15 0.00 0.00 3.36
504 505 1.930520 CCCCCTCCAAATTCCGGAT 59.069 57.895 4.15 0.00 0.00 4.18
505 506 2.991329 GCCCCCTCCAAATTCCGGA 61.991 63.158 0.00 0.00 0.00 5.14
506 507 2.442087 GCCCCCTCCAAATTCCGG 60.442 66.667 0.00 0.00 0.00 5.14
507 508 2.828549 CGCCCCCTCCAAATTCCG 60.829 66.667 0.00 0.00 0.00 4.30
508 509 2.442087 CCGCCCCCTCCAAATTCC 60.442 66.667 0.00 0.00 0.00 3.01
509 510 2.442087 CCCGCCCCCTCCAAATTC 60.442 66.667 0.00 0.00 0.00 2.17
510 511 4.074408 CCCCGCCCCCTCCAAATT 62.074 66.667 0.00 0.00 0.00 1.82
526 527 4.265056 ACTGGACCCAACCACGCC 62.265 66.667 0.00 0.00 35.91 5.68
527 528 2.978010 CACTGGACCCAACCACGC 60.978 66.667 0.00 0.00 35.91 5.34
528 529 2.281484 CCACTGGACCCAACCACG 60.281 66.667 0.00 0.00 35.91 4.94
529 530 2.597510 GCCACTGGACCCAACCAC 60.598 66.667 0.00 0.00 35.91 4.16
530 531 3.099841 TGCCACTGGACCCAACCA 61.100 61.111 0.00 0.00 38.33 3.67
531 532 2.282462 CTGCCACTGGACCCAACC 60.282 66.667 0.00 0.00 0.00 3.77
532 533 2.983725 AAGCTGCCACTGGACCCAAC 62.984 60.000 0.00 0.00 0.00 3.77
533 534 1.422977 TAAGCTGCCACTGGACCCAA 61.423 55.000 0.00 0.00 0.00 4.12
534 535 1.841302 CTAAGCTGCCACTGGACCCA 61.841 60.000 0.00 0.00 0.00 4.51
535 536 1.078143 CTAAGCTGCCACTGGACCC 60.078 63.158 0.00 0.00 0.00 4.46
536 537 1.078143 CCTAAGCTGCCACTGGACC 60.078 63.158 0.00 0.00 0.00 4.46
537 538 1.746991 GCCTAAGCTGCCACTGGAC 60.747 63.158 0.00 0.00 35.50 4.02
538 539 2.671070 GCCTAAGCTGCCACTGGA 59.329 61.111 0.00 0.00 35.50 3.86
559 560 9.942850 TCTCATGTGTCATTGACTTAGATAAAA 57.057 29.630 17.26 0.00 33.15 1.52
560 561 9.371136 GTCTCATGTGTCATTGACTTAGATAAA 57.629 33.333 17.26 0.00 33.15 1.40
561 562 7.981789 GGTCTCATGTGTCATTGACTTAGATAA 59.018 37.037 17.26 0.00 33.15 1.75
562 563 7.343057 AGGTCTCATGTGTCATTGACTTAGATA 59.657 37.037 17.26 0.00 33.15 1.98
563 564 6.155910 AGGTCTCATGTGTCATTGACTTAGAT 59.844 38.462 17.26 0.18 33.15 1.98
564 565 5.481824 AGGTCTCATGTGTCATTGACTTAGA 59.518 40.000 17.26 9.71 33.15 2.10
565 566 5.728471 AGGTCTCATGTGTCATTGACTTAG 58.272 41.667 17.26 7.86 33.15 2.18
566 567 5.745312 AGGTCTCATGTGTCATTGACTTA 57.255 39.130 17.26 7.11 33.15 2.24
567 568 4.630644 AGGTCTCATGTGTCATTGACTT 57.369 40.909 17.26 0.66 33.15 3.01
568 569 5.946942 ATAGGTCTCATGTGTCATTGACT 57.053 39.130 17.26 0.00 33.15 3.41
569 570 6.595326 TCAAATAGGTCTCATGTGTCATTGAC 59.405 38.462 9.93 9.93 0.00 3.18
570 571 6.710278 TCAAATAGGTCTCATGTGTCATTGA 58.290 36.000 0.00 0.00 0.00 2.57
571 572 6.990341 TCAAATAGGTCTCATGTGTCATTG 57.010 37.500 0.00 0.00 0.00 2.82
572 573 9.281371 CATATCAAATAGGTCTCATGTGTCATT 57.719 33.333 0.00 0.00 0.00 2.57
573 574 7.881751 CCATATCAAATAGGTCTCATGTGTCAT 59.118 37.037 0.00 0.00 0.00 3.06
574 575 7.147497 ACCATATCAAATAGGTCTCATGTGTCA 60.147 37.037 0.00 0.00 0.00 3.58
575 576 7.220030 ACCATATCAAATAGGTCTCATGTGTC 58.780 38.462 0.00 0.00 0.00 3.67
576 577 7.141758 ACCATATCAAATAGGTCTCATGTGT 57.858 36.000 0.00 0.00 0.00 3.72
577 578 9.730705 ATAACCATATCAAATAGGTCTCATGTG 57.269 33.333 0.00 0.00 32.05 3.21
595 596 9.947433 CCTCAAACCCGTATAATAATAACCATA 57.053 33.333 0.00 0.00 0.00 2.74
596 597 7.886446 CCCTCAAACCCGTATAATAATAACCAT 59.114 37.037 0.00 0.00 0.00 3.55
597 598 7.147337 ACCCTCAAACCCGTATAATAATAACCA 60.147 37.037 0.00 0.00 0.00 3.67
598 599 7.226441 ACCCTCAAACCCGTATAATAATAACC 58.774 38.462 0.00 0.00 0.00 2.85
599 600 8.681486 AACCCTCAAACCCGTATAATAATAAC 57.319 34.615 0.00 0.00 0.00 1.89
600 601 9.122779 CAAACCCTCAAACCCGTATAATAATAA 57.877 33.333 0.00 0.00 0.00 1.40
601 602 7.229106 GCAAACCCTCAAACCCGTATAATAATA 59.771 37.037 0.00 0.00 0.00 0.98
602 603 6.040054 GCAAACCCTCAAACCCGTATAATAAT 59.960 38.462 0.00 0.00 0.00 1.28
603 604 5.357596 GCAAACCCTCAAACCCGTATAATAA 59.642 40.000 0.00 0.00 0.00 1.40
604 605 4.883006 GCAAACCCTCAAACCCGTATAATA 59.117 41.667 0.00 0.00 0.00 0.98
605 606 3.697542 GCAAACCCTCAAACCCGTATAAT 59.302 43.478 0.00 0.00 0.00 1.28
606 607 3.083293 GCAAACCCTCAAACCCGTATAA 58.917 45.455 0.00 0.00 0.00 0.98
607 608 2.040012 TGCAAACCCTCAAACCCGTATA 59.960 45.455 0.00 0.00 0.00 1.47
608 609 1.202952 TGCAAACCCTCAAACCCGTAT 60.203 47.619 0.00 0.00 0.00 3.06
609 610 0.183014 TGCAAACCCTCAAACCCGTA 59.817 50.000 0.00 0.00 0.00 4.02
610 611 0.469144 ATGCAAACCCTCAAACCCGT 60.469 50.000 0.00 0.00 0.00 5.28
611 612 0.038343 CATGCAAACCCTCAAACCCG 60.038 55.000 0.00 0.00 0.00 5.28
612 613 1.047801 ACATGCAAACCCTCAAACCC 58.952 50.000 0.00 0.00 0.00 4.11
613 614 3.368323 CCATACATGCAAACCCTCAAACC 60.368 47.826 0.00 0.00 0.00 3.27
614 615 3.368323 CCCATACATGCAAACCCTCAAAC 60.368 47.826 0.00 0.00 0.00 2.93
615 616 2.830923 CCCATACATGCAAACCCTCAAA 59.169 45.455 0.00 0.00 0.00 2.69
616 617 2.225242 ACCCATACATGCAAACCCTCAA 60.225 45.455 0.00 0.00 0.00 3.02
617 618 1.357420 ACCCATACATGCAAACCCTCA 59.643 47.619 0.00 0.00 0.00 3.86
618 619 2.143876 ACCCATACATGCAAACCCTC 57.856 50.000 0.00 0.00 0.00 4.30
619 620 3.960102 CAATACCCATACATGCAAACCCT 59.040 43.478 0.00 0.00 0.00 4.34
620 621 3.492482 GCAATACCCATACATGCAAACCC 60.492 47.826 0.00 0.00 37.00 4.11
621 622 3.492482 GGCAATACCCATACATGCAAACC 60.492 47.826 0.00 0.00 38.73 3.27
622 623 3.384467 AGGCAATACCCATACATGCAAAC 59.616 43.478 0.00 0.00 40.58 2.93
623 624 3.641046 AGGCAATACCCATACATGCAAA 58.359 40.909 0.00 0.00 40.58 3.68
624 625 3.311167 AGGCAATACCCATACATGCAA 57.689 42.857 0.00 0.00 40.58 4.08
625 626 3.221771 GAAGGCAATACCCATACATGCA 58.778 45.455 0.00 0.00 40.58 3.96
626 627 2.558359 GGAAGGCAATACCCATACATGC 59.442 50.000 0.00 0.00 40.58 4.06
627 628 3.157087 GGGAAGGCAATACCCATACATG 58.843 50.000 0.00 0.00 42.81 3.21
628 629 3.525800 GGGAAGGCAATACCCATACAT 57.474 47.619 0.00 0.00 42.81 2.29
634 635 2.287977 GGTATGGGAAGGCAATACCC 57.712 55.000 0.00 0.00 39.89 3.69
635 636 1.544759 CGGGTATGGGAAGGCAATACC 60.545 57.143 3.02 3.02 43.41 2.73
636 637 1.142262 ACGGGTATGGGAAGGCAATAC 59.858 52.381 0.00 0.00 0.00 1.89
637 638 1.513858 ACGGGTATGGGAAGGCAATA 58.486 50.000 0.00 0.00 0.00 1.90
638 639 1.142262 GTACGGGTATGGGAAGGCAAT 59.858 52.381 0.00 0.00 0.00 3.56
639 640 0.542805 GTACGGGTATGGGAAGGCAA 59.457 55.000 0.00 0.00 0.00 4.52
640 641 1.339644 GGTACGGGTATGGGAAGGCA 61.340 60.000 0.00 0.00 0.00 4.75
641 642 1.448924 GGTACGGGTATGGGAAGGC 59.551 63.158 0.00 0.00 0.00 4.35
642 643 1.751349 CGGGTACGGGTATGGGAAGG 61.751 65.000 0.00 0.00 36.18 3.46
643 644 1.744014 CGGGTACGGGTATGGGAAG 59.256 63.158 0.00 0.00 36.18 3.46
644 645 2.433994 GCGGGTACGGGTATGGGAA 61.434 63.158 0.00 0.00 41.36 3.97
645 646 2.839162 GCGGGTACGGGTATGGGA 60.839 66.667 0.00 0.00 41.36 4.37
646 647 3.932483 GGCGGGTACGGGTATGGG 61.932 72.222 0.00 0.00 41.36 4.00
647 648 1.114722 TTAGGCGGGTACGGGTATGG 61.115 60.000 0.00 0.00 41.36 2.74
648 649 0.032540 GTTAGGCGGGTACGGGTATG 59.967 60.000 0.00 0.00 41.36 2.39
649 650 1.115326 GGTTAGGCGGGTACGGGTAT 61.115 60.000 0.00 0.00 41.36 2.73
650 651 1.756561 GGTTAGGCGGGTACGGGTA 60.757 63.158 0.00 0.00 41.36 3.69
651 652 3.076916 GGTTAGGCGGGTACGGGT 61.077 66.667 0.00 0.00 41.36 5.28
652 653 3.853487 GGGTTAGGCGGGTACGGG 61.853 72.222 0.00 0.00 41.36 5.28
653 654 1.974973 AATGGGTTAGGCGGGTACGG 61.975 60.000 0.00 0.00 41.36 4.02
654 655 0.752054 TAATGGGTTAGGCGGGTACG 59.248 55.000 0.00 0.00 44.63 3.67
655 656 2.538512 CTAATGGGTTAGGCGGGTAC 57.461 55.000 0.00 0.00 34.85 3.34
681 682 9.771534 CACCTATGGGTTTTTAAATGAGAAAAA 57.228 29.630 0.00 0.00 44.73 1.94
682 683 8.929487 ACACCTATGGGTTTTTAAATGAGAAAA 58.071 29.630 0.00 0.00 44.73 2.29
683 684 8.485578 ACACCTATGGGTTTTTAAATGAGAAA 57.514 30.769 0.00 0.00 44.73 2.52
684 685 8.485578 AACACCTATGGGTTTTTAAATGAGAA 57.514 30.769 0.00 0.00 44.73 2.87
685 686 8.485578 AAACACCTATGGGTTTTTAAATGAGA 57.514 30.769 10.37 0.00 44.73 3.27
693 694 9.772973 GAGAAATTAAAACACCTATGGGTTTTT 57.227 29.630 15.04 18.11 44.49 1.94
694 695 8.929487 TGAGAAATTAAAACACCTATGGGTTTT 58.071 29.630 14.39 14.39 44.73 2.43
695 696 8.485578 TGAGAAATTAAAACACCTATGGGTTT 57.514 30.769 0.00 0.00 44.73 3.27
696 697 8.664669 ATGAGAAATTAAAACACCTATGGGTT 57.335 30.769 0.00 0.00 44.73 4.11
729 730 9.991906 CCGACAGATATAAAAACCCTAATAGAA 57.008 33.333 0.00 0.00 0.00 2.10
730 731 8.591072 CCCGACAGATATAAAAACCCTAATAGA 58.409 37.037 0.00 0.00 0.00 1.98
731 732 8.373220 ACCCGACAGATATAAAAACCCTAATAG 58.627 37.037 0.00 0.00 0.00 1.73
732 733 8.266363 ACCCGACAGATATAAAAACCCTAATA 57.734 34.615 0.00 0.00 0.00 0.98
733 734 7.145474 ACCCGACAGATATAAAAACCCTAAT 57.855 36.000 0.00 0.00 0.00 1.73
734 735 6.564557 ACCCGACAGATATAAAAACCCTAA 57.435 37.500 0.00 0.00 0.00 2.69
735 736 6.564557 AACCCGACAGATATAAAAACCCTA 57.435 37.500 0.00 0.00 0.00 3.53
736 737 5.434408 GAACCCGACAGATATAAAAACCCT 58.566 41.667 0.00 0.00 0.00 4.34
737 738 4.271776 CGAACCCGACAGATATAAAAACCC 59.728 45.833 0.00 0.00 38.22 4.11
738 739 4.260497 GCGAACCCGACAGATATAAAAACC 60.260 45.833 0.00 0.00 38.22 3.27
739 740 4.330620 TGCGAACCCGACAGATATAAAAAC 59.669 41.667 0.00 0.00 38.22 2.43
740 741 4.505808 TGCGAACCCGACAGATATAAAAA 58.494 39.130 0.00 0.00 38.22 1.94
741 742 4.116961 CTGCGAACCCGACAGATATAAAA 58.883 43.478 0.00 0.00 40.08 1.52
742 743 3.491964 CCTGCGAACCCGACAGATATAAA 60.492 47.826 0.00 0.00 40.08 1.40
743 744 2.035449 CCTGCGAACCCGACAGATATAA 59.965 50.000 0.00 0.00 40.08 0.98
744 745 1.611977 CCTGCGAACCCGACAGATATA 59.388 52.381 0.00 0.00 40.08 0.86
745 746 0.389391 CCTGCGAACCCGACAGATAT 59.611 55.000 0.00 0.00 40.08 1.63
746 747 0.968901 ACCTGCGAACCCGACAGATA 60.969 55.000 0.00 0.00 40.08 1.98
747 748 0.968901 TACCTGCGAACCCGACAGAT 60.969 55.000 0.00 0.00 40.08 2.90
748 749 1.592400 CTACCTGCGAACCCGACAGA 61.592 60.000 0.00 0.00 40.08 3.41
749 750 1.153823 CTACCTGCGAACCCGACAG 60.154 63.158 0.00 0.00 38.62 3.51
750 751 2.967397 CTACCTGCGAACCCGACA 59.033 61.111 0.00 0.00 38.22 4.35
751 752 2.508663 GCTACCTGCGAACCCGAC 60.509 66.667 0.00 0.00 38.22 4.79
760 761 1.941999 AACGAGTACCCGCTACCTGC 61.942 60.000 0.00 0.00 38.57 4.85
761 762 0.179145 CAACGAGTACCCGCTACCTG 60.179 60.000 0.00 0.00 0.00 4.00
762 763 1.941999 GCAACGAGTACCCGCTACCT 61.942 60.000 0.00 0.00 0.00 3.08
763 764 1.517913 GCAACGAGTACCCGCTACC 60.518 63.158 0.00 0.00 0.00 3.18
764 765 1.517913 GGCAACGAGTACCCGCTAC 60.518 63.158 0.00 0.00 0.00 3.58
765 766 1.324740 ATGGCAACGAGTACCCGCTA 61.325 55.000 0.00 0.00 42.51 4.26
766 767 2.656069 ATGGCAACGAGTACCCGCT 61.656 57.895 0.00 0.00 42.51 5.52
767 768 2.125269 ATGGCAACGAGTACCCGC 60.125 61.111 0.00 0.00 42.51 6.13
768 769 0.672401 AACATGGCAACGAGTACCCG 60.672 55.000 0.00 0.00 42.51 5.28
769 770 0.802494 CAACATGGCAACGAGTACCC 59.198 55.000 0.00 0.00 42.51 3.69
770 771 1.732259 CTCAACATGGCAACGAGTACC 59.268 52.381 0.00 0.00 42.51 3.34
771 772 1.128692 GCTCAACATGGCAACGAGTAC 59.871 52.381 0.00 0.00 42.51 2.73
772 773 1.438651 GCTCAACATGGCAACGAGTA 58.561 50.000 0.00 0.00 42.51 2.59
773 774 1.237285 GGCTCAACATGGCAACGAGT 61.237 55.000 0.00 0.00 42.51 4.18
774 775 1.503542 GGCTCAACATGGCAACGAG 59.496 57.895 0.00 0.00 42.51 4.18
775 776 2.324330 CGGCTCAACATGGCAACGA 61.324 57.895 0.00 0.00 42.51 3.85
776 777 2.176546 CGGCTCAACATGGCAACG 59.823 61.111 0.00 0.00 42.51 4.10
777 778 1.210155 GACGGCTCAACATGGCAAC 59.790 57.895 0.00 0.00 0.00 4.17
778 779 1.971167 GGACGGCTCAACATGGCAA 60.971 57.895 0.00 0.00 0.00 4.52
779 780 2.359850 GGACGGCTCAACATGGCA 60.360 61.111 0.00 0.00 0.00 4.92
780 781 1.718757 GATGGACGGCTCAACATGGC 61.719 60.000 0.00 0.00 0.00 4.40
781 782 1.431488 CGATGGACGGCTCAACATGG 61.431 60.000 0.00 0.00 38.46 3.66
782 783 2.009108 CGATGGACGGCTCAACATG 58.991 57.895 0.00 0.00 38.46 3.21
783 784 1.815421 GCGATGGACGGCTCAACAT 60.815 57.895 0.00 0.00 42.83 2.71
784 785 2.434185 GCGATGGACGGCTCAACA 60.434 61.111 0.00 0.00 42.83 3.33
792 793 4.082523 AGGTGGTGGCGATGGACG 62.083 66.667 0.00 0.00 45.66 4.79
793 794 2.125106 GAGGTGGTGGCGATGGAC 60.125 66.667 0.00 0.00 0.00 4.02
794 795 3.399181 GGAGGTGGTGGCGATGGA 61.399 66.667 0.00 0.00 0.00 3.41
795 796 4.489771 GGGAGGTGGTGGCGATGG 62.490 72.222 0.00 0.00 0.00 3.51
796 797 3.402681 AGGGAGGTGGTGGCGATG 61.403 66.667 0.00 0.00 0.00 3.84
797 798 3.402681 CAGGGAGGTGGTGGCGAT 61.403 66.667 0.00 0.00 0.00 4.58
798 799 4.954118 ACAGGGAGGTGGTGGCGA 62.954 66.667 0.00 0.00 0.00 5.54
799 800 4.704833 CACAGGGAGGTGGTGGCG 62.705 72.222 0.00 0.00 35.13 5.69
800 801 2.221299 TACACAGGGAGGTGGTGGC 61.221 63.158 0.00 0.00 43.08 5.01
801 802 1.677552 GTACACAGGGAGGTGGTGG 59.322 63.158 0.00 0.00 43.08 4.61
802 803 1.677552 GGTACACAGGGAGGTGGTG 59.322 63.158 0.00 0.00 43.08 4.17
803 804 1.538135 GGGTACACAGGGAGGTGGT 60.538 63.158 0.00 0.00 43.08 4.16
804 805 2.656069 CGGGTACACAGGGAGGTGG 61.656 68.421 0.00 0.00 43.08 4.61
805 806 2.978824 CGGGTACACAGGGAGGTG 59.021 66.667 0.00 0.00 44.35 4.00
806 807 3.001406 GCGGGTACACAGGGAGGT 61.001 66.667 0.00 0.00 0.00 3.85
807 808 2.683933 AGCGGGTACACAGGGAGG 60.684 66.667 0.00 0.00 0.00 4.30
808 809 2.893398 GAGCGGGTACACAGGGAG 59.107 66.667 0.00 0.00 0.00 4.30
809 810 3.066190 CGAGCGGGTACACAGGGA 61.066 66.667 0.00 0.00 0.00 4.20
810 811 3.379445 ACGAGCGGGTACACAGGG 61.379 66.667 0.00 0.00 0.00 4.45
811 812 2.126071 CACGAGCGGGTACACAGG 60.126 66.667 0.00 0.00 0.00 4.00
812 813 2.126071 CCACGAGCGGGTACACAG 60.126 66.667 0.00 0.00 0.00 3.66
813 814 3.687102 CCCACGAGCGGGTACACA 61.687 66.667 0.00 0.00 41.83 3.72
814 815 4.446413 CCCCACGAGCGGGTACAC 62.446 72.222 8.22 0.00 45.80 2.90
945 946 0.179202 CTCTGCTCTCGTCTGTGTCG 60.179 60.000 0.00 0.00 0.00 4.35
948 949 1.398041 CTCTCTCTGCTCTCGTCTGTG 59.602 57.143 0.00 0.00 0.00 3.66
967 972 2.115911 CGCTCGGACTAGTCTGGCT 61.116 63.158 27.60 0.00 36.64 4.75
968 973 2.409651 CGCTCGGACTAGTCTGGC 59.590 66.667 27.60 25.70 36.64 4.85
969 974 2.409651 GCGCTCGGACTAGTCTGG 59.590 66.667 27.60 19.76 36.64 3.86
970 975 2.023461 CGCGCTCGGACTAGTCTG 59.977 66.667 23.54 23.54 37.32 3.51
986 993 0.658829 CTTCATACCTCTCTCGCGCG 60.659 60.000 26.76 26.76 0.00 6.86
990 997 1.333177 CCCCCTTCATACCTCTCTCG 58.667 60.000 0.00 0.00 0.00 4.04
1063 1070 4.154347 CAGCTCCCTGTCCTCCGC 62.154 72.222 0.00 0.00 34.31 5.54
1521 1528 4.394712 GCCACCACCGTCTCCTGG 62.395 72.222 0.00 0.00 0.00 4.45
1739 1746 2.291043 AACCACGGGGAGCCTAGTG 61.291 63.158 12.96 7.56 38.05 2.74
1740 1747 2.122056 AACCACGGGGAGCCTAGT 59.878 61.111 12.96 0.00 38.05 2.57
1746 1753 4.722700 CCAGGCAACCACGGGGAG 62.723 72.222 12.96 2.92 38.05 4.30
1750 1757 3.901797 GAGGACCAGGCAACCACGG 62.902 68.421 0.00 0.00 37.17 4.94
1751 1758 2.358737 GAGGACCAGGCAACCACG 60.359 66.667 0.00 0.00 37.17 4.94
1752 1759 1.302832 CAGAGGACCAGGCAACCAC 60.303 63.158 0.00 0.00 37.17 4.16
1753 1760 1.768684 GACAGAGGACCAGGCAACCA 61.769 60.000 0.00 0.00 37.17 3.67
1754 1761 1.003233 GACAGAGGACCAGGCAACC 60.003 63.158 0.00 0.00 37.17 3.77
1755 1762 1.003233 GGACAGAGGACCAGGCAAC 60.003 63.158 0.00 0.00 0.00 4.17
1756 1763 2.224159 GGGACAGAGGACCAGGCAA 61.224 63.158 0.00 0.00 0.00 4.52
1757 1764 2.607750 GGGACAGAGGACCAGGCA 60.608 66.667 0.00 0.00 0.00 4.75
1758 1765 3.403558 GGGGACAGAGGACCAGGC 61.404 72.222 0.00 0.00 0.00 4.85
1759 1766 2.689034 GGGGGACAGAGGACCAGG 60.689 72.222 0.00 0.00 0.00 4.45
1760 1767 1.687493 GAGGGGGACAGAGGACCAG 60.687 68.421 0.00 0.00 0.00 4.00
1761 1768 2.450243 GAGGGGGACAGAGGACCA 59.550 66.667 0.00 0.00 0.00 4.02
1762 1769 2.365768 GGAGGGGGACAGAGGACC 60.366 72.222 0.00 0.00 0.00 4.46
1763 1770 0.621862 AATGGAGGGGGACAGAGGAC 60.622 60.000 0.00 0.00 0.00 3.85
1764 1771 0.621571 CAATGGAGGGGGACAGAGGA 60.622 60.000 0.00 0.00 0.00 3.71
1765 1772 1.639635 CCAATGGAGGGGGACAGAGG 61.640 65.000 0.00 0.00 0.00 3.69
1766 1773 0.916358 ACCAATGGAGGGGGACAGAG 60.916 60.000 6.16 0.00 0.00 3.35
1767 1774 0.914417 GACCAATGGAGGGGGACAGA 60.914 60.000 6.16 0.00 0.00 3.41
1770 1777 1.609783 CAGACCAATGGAGGGGGAC 59.390 63.158 6.16 0.00 0.00 4.46
1772 1779 2.276740 GCAGACCAATGGAGGGGG 59.723 66.667 6.16 0.00 0.00 5.40
1773 1780 2.124570 CGCAGACCAATGGAGGGG 60.125 66.667 6.16 0.00 0.00 4.79
1905 1936 0.036577 GTGCAGTGCAGTGGAGATCT 60.037 55.000 20.42 0.00 40.08 2.75
1913 1944 1.462616 TTCAAACAGTGCAGTGCAGT 58.537 45.000 20.42 20.16 43.59 4.40
1916 1947 5.698832 TGTAATATTCAAACAGTGCAGTGC 58.301 37.500 21.57 8.58 0.00 4.40
1978 2012 7.506328 AGACTTTCATAACACCCTGTTTAAC 57.494 36.000 0.00 0.00 41.45 2.01
1986 2020 7.793036 AGGTATAGAAGACTTTCATAACACCC 58.207 38.462 7.43 0.00 35.70 4.61
2040 2112 7.761704 ACCAGATATATCGCTTAATTGCAGTAG 59.238 37.037 7.08 0.00 0.00 2.57
2042 2114 6.369890 CACCAGATATATCGCTTAATTGCAGT 59.630 38.462 7.08 0.00 0.00 4.40
2141 2306 4.335594 GGCTCTGGTTTATAGCATCGTTTT 59.664 41.667 0.00 0.00 38.01 2.43
2150 2315 2.159099 TGCAGTCGGCTCTGGTTTATAG 60.159 50.000 0.00 0.00 45.15 1.31
2247 2430 4.320788 CCAACTTGCTGACTCTGAATTTCC 60.321 45.833 0.00 0.00 0.00 3.13
2402 2587 9.725019 TCTTAATTTACACAAGTCATGACTCAT 57.275 29.630 28.01 16.37 41.58 2.90
2405 2590 8.157476 ACCTCTTAATTTACACAAGTCATGACT 58.843 33.333 22.89 22.89 44.94 3.41
2406 2591 8.324163 ACCTCTTAATTTACACAAGTCATGAC 57.676 34.615 18.47 18.47 0.00 3.06
2408 2593 9.436957 AGTACCTCTTAATTTACACAAGTCATG 57.563 33.333 0.00 0.00 0.00 3.07
2409 2594 9.654663 GAGTACCTCTTAATTTACACAAGTCAT 57.345 33.333 0.00 0.00 0.00 3.06
2444 2707 7.710907 TGCTATCACTAGTGGTAATTTAGCTTG 59.289 37.037 22.28 8.52 0.00 4.01
2455 2718 8.322091 AGAAGTAAATTTGCTATCACTAGTGGT 58.678 33.333 22.48 18.57 0.00 4.16
2456 2719 8.607459 CAGAAGTAAATTTGCTATCACTAGTGG 58.393 37.037 22.48 8.08 0.00 4.00
2457 2720 9.155975 ACAGAAGTAAATTTGCTATCACTAGTG 57.844 33.333 17.17 17.17 0.00 2.74
2486 2749 7.450903 ACTTGACCTTGCAATTTAGTAGTACT 58.549 34.615 8.14 8.14 0.00 2.73
2487 2750 7.668525 ACTTGACCTTGCAATTTAGTAGTAC 57.331 36.000 0.00 0.00 0.00 2.73
2488 2751 8.685838 AAACTTGACCTTGCAATTTAGTAGTA 57.314 30.769 0.00 0.00 0.00 1.82
2489 2752 7.582667 AAACTTGACCTTGCAATTTAGTAGT 57.417 32.000 0.00 0.00 0.00 2.73
2490 2753 8.134895 TGAAAACTTGACCTTGCAATTTAGTAG 58.865 33.333 0.00 0.00 0.00 2.57
2491 2754 8.001881 TGAAAACTTGACCTTGCAATTTAGTA 57.998 30.769 0.00 0.00 0.00 1.82
2492 2755 6.872920 TGAAAACTTGACCTTGCAATTTAGT 58.127 32.000 0.00 0.00 0.00 2.24
2493 2756 7.202526 TCTGAAAACTTGACCTTGCAATTTAG 58.797 34.615 0.00 0.00 0.00 1.85
2494 2757 7.106439 TCTGAAAACTTGACCTTGCAATTTA 57.894 32.000 0.00 0.00 0.00 1.40
2527 2790 6.977502 CGGTTTATGCCAATGTTTCATGATAA 59.022 34.615 0.00 0.00 0.00 1.75
2546 2869 0.947180 GTGCACTCGGCTTCGGTTTA 60.947 55.000 10.32 0.00 45.15 2.01
2552 2875 0.598065 AAAATGGTGCACTCGGCTTC 59.402 50.000 17.98 0.00 45.15 3.86
2597 2920 4.250464 CATCGTAGCAAGGTAGTCCAAAA 58.750 43.478 0.00 0.00 35.89 2.44
2598 2921 3.857052 CATCGTAGCAAGGTAGTCCAAA 58.143 45.455 0.00 0.00 35.89 3.28
2599 2922 2.418197 GCATCGTAGCAAGGTAGTCCAA 60.418 50.000 0.00 0.00 35.89 3.53
2603 2926 0.815734 ACGCATCGTAGCAAGGTAGT 59.184 50.000 3.09 0.00 38.73 2.73
2605 2928 3.565063 TGTATACGCATCGTAGCAAGGTA 59.435 43.478 5.34 0.00 45.45 3.08
2610 2933 5.044558 TGAAAATGTATACGCATCGTAGCA 58.955 37.500 5.34 6.96 45.45 3.49
2625 2957 5.163322 TGCTGACCCTGAATTTTGAAAATGT 60.163 36.000 3.62 0.00 0.00 2.71
2680 3012 2.970974 GCACCAGCTTCGCTTCACC 61.971 63.158 0.00 0.00 36.40 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.