Multiple sequence alignment - TraesCS1A01G315500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G315500 chr1A 100.000 4095 0 0 1 4095 507075420 507079514 0.000000e+00 7563.0
1 TraesCS1A01G315500 chr1A 90.418 407 28 6 1 398 508209993 508209589 3.630000e-145 525.0
2 TraesCS1A01G315500 chr1A 90.278 72 6 1 2843 2914 477033636 477033566 4.360000e-15 93.5
3 TraesCS1A01G315500 chr1D 93.936 2078 89 12 2053 4095 410791464 410793539 0.000000e+00 3105.0
4 TraesCS1A01G315500 chr1D 86.522 1150 67 24 720 1821 410790175 410791284 0.000000e+00 1184.0
5 TraesCS1A01G315500 chr1D 90.663 407 26 9 1 398 102156652 102156249 7.790000e-147 531.0
6 TraesCS1A01G315500 chr1D 89.731 409 30 6 1 398 18760691 18761098 2.820000e-141 512.0
7 TraesCS1A01G315500 chr1D 92.500 40 2 1 594 632 381306998 381307037 5.720000e-04 56.5
8 TraesCS1A01G315500 chr1B 91.094 1325 75 11 1940 3239 553630237 553631543 0.000000e+00 1753.0
9 TraesCS1A01G315500 chr1B 86.154 1170 63 38 711 1839 553629125 553630236 0.000000e+00 1171.0
10 TraesCS1A01G315500 chr1B 88.072 612 41 19 3485 4095 553631631 553632211 0.000000e+00 697.0
11 TraesCS1A01G315500 chr1B 96.396 111 4 0 1836 1946 405127468 405127358 2.510000e-42 183.0
12 TraesCS1A01G315500 chr2D 90.686 408 26 8 1 399 617045053 617044649 2.170000e-147 532.0
13 TraesCS1A01G315500 chr2D 90.640 406 27 8 1 397 30004790 30005193 2.800000e-146 529.0
14 TraesCS1A01G315500 chr2D 89.130 46 3 1 586 629 548040391 548040436 5.720000e-04 56.5
15 TraesCS1A01G315500 chr3D 90.640 406 27 8 1 397 373599410 373599813 2.800000e-146 529.0
16 TraesCS1A01G315500 chr3D 84.884 344 25 5 966 1285 580429304 580428964 5.110000e-84 322.0
17 TraesCS1A01G315500 chr3D 86.885 183 23 1 1470 1651 580428965 580428783 1.930000e-48 204.0
18 TraesCS1A01G315500 chr3D 93.056 72 4 1 2843 2914 554962378 554962308 2.010000e-18 104.0
19 TraesCS1A01G315500 chr7A 90.268 411 29 6 1 401 63577063 63576654 1.010000e-145 527.0
20 TraesCS1A01G315500 chr7A 90.909 132 9 3 1825 1953 109580623 109580492 1.510000e-39 174.0
21 TraesCS1A01G315500 chr7A 100.000 31 0 0 602 632 562274990 562274960 1.590000e-04 58.4
22 TraesCS1A01G315500 chr5A 90.441 408 27 6 1 398 74670736 74671141 1.010000e-145 527.0
23 TraesCS1A01G315500 chr5A 89.706 408 29 6 1 397 546802443 546802848 3.650000e-140 508.0
24 TraesCS1A01G315500 chr5B 90.347 404 30 7 1 398 588793051 588793451 4.690000e-144 521.0
25 TraesCS1A01G315500 chr5B 90.278 72 6 1 2843 2914 622329636 622329706 4.360000e-15 93.5
26 TraesCS1A01G315500 chr5B 90.000 50 2 3 587 633 176590634 176590585 1.230000e-05 62.1
27 TraesCS1A01G315500 chr3A 90.323 403 32 5 1 398 125212336 125211936 4.690000e-144 521.0
28 TraesCS1A01G315500 chr3A 88.530 279 29 3 1470 1746 223706933 223706656 6.560000e-88 335.0
29 TraesCS1A01G315500 chr3A 82.808 349 33 5 966 1290 223707272 223706927 1.860000e-73 287.0
30 TraesCS1A01G315500 chr3A 81.166 223 23 4 2703 2916 708003198 708003410 1.180000e-35 161.0
31 TraesCS1A01G315500 chr3A 86.029 136 16 1 970 1102 748838383 748838248 4.270000e-30 143.0
32 TraesCS1A01G315500 chr3A 91.304 46 2 1 586 629 661792743 661792698 1.230000e-05 62.1
33 TraesCS1A01G315500 chr3A 94.872 39 1 1 596 633 109987876 109987838 4.420000e-05 60.2
34 TraesCS1A01G315500 chr4A 90.172 407 28 8 1 397 503613504 503613908 1.690000e-143 520.0
35 TraesCS1A01G315500 chrUn 89.731 409 30 6 1 398 160957 161364 2.820000e-141 512.0
36 TraesCS1A01G315500 chr2B 89.373 367 33 3 3490 3852 234631279 234631643 1.340000e-124 457.0
37 TraesCS1A01G315500 chr2B 92.800 125 6 3 1835 1957 76813493 76813616 1.170000e-40 178.0
38 TraesCS1A01G315500 chr2B 96.104 77 3 0 3936 4012 234631651 234631727 4.300000e-25 126.0
39 TraesCS1A01G315500 chr2B 94.872 39 2 0 591 629 47412433 47412471 1.230000e-05 62.1
40 TraesCS1A01G315500 chr5D 84.814 349 26 8 966 1290 168714654 168714309 3.950000e-85 326.0
41 TraesCS1A01G315500 chr5D 90.710 183 16 1 1470 1651 168714315 168714133 4.090000e-60 243.0
42 TraesCS1A01G315500 chr5D 89.796 49 2 3 587 632 164606042 164605994 4.420000e-05 60.2
43 TraesCS1A01G315500 chr5D 96.970 33 1 0 594 626 546566848 546566880 5.720000e-04 56.5
44 TraesCS1A01G315500 chr6B 96.460 113 4 0 1834 1946 544804495 544804607 1.940000e-43 187.0
45 TraesCS1A01G315500 chr6B 90.278 72 6 1 2843 2914 638422359 638422429 4.360000e-15 93.5
46 TraesCS1A01G315500 chr6B 92.308 39 3 0 3306 3344 432570976 432571014 5.720000e-04 56.5
47 TraesCS1A01G315500 chr6A 94.915 118 6 0 1836 1953 577718779 577718662 6.990000e-43 185.0
48 TraesCS1A01G315500 chr6A 94.068 118 7 0 1836 1953 577717171 577717054 3.250000e-41 180.0
49 TraesCS1A01G315500 chr6A 94.068 118 7 0 1836 1953 577717975 577717858 3.250000e-41 180.0
50 TraesCS1A01G315500 chr7B 95.575 113 5 0 1837 1949 327689817 327689705 9.040000e-42 182.0
51 TraesCS1A01G315500 chr7B 90.278 72 6 1 2843 2914 74336680 74336750 4.360000e-15 93.5
52 TraesCS1A01G315500 chr7B 88.406 69 7 1 2846 2914 609840495 609840428 9.430000e-12 82.4
53 TraesCS1A01G315500 chr4B 91.935 124 10 0 1834 1957 139629006 139629129 1.510000e-39 174.0
54 TraesCS1A01G315500 chr3B 92.958 71 4 1 2844 2914 737762024 737762093 7.240000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G315500 chr1A 507075420 507079514 4094 False 7563.0 7563 100.0000 1 4095 1 chr1A.!!$F1 4094
1 TraesCS1A01G315500 chr1D 410790175 410793539 3364 False 2144.5 3105 90.2290 720 4095 2 chr1D.!!$F3 3375
2 TraesCS1A01G315500 chr1B 553629125 553632211 3086 False 1207.0 1753 88.4400 711 4095 3 chr1B.!!$F1 3384
3 TraesCS1A01G315500 chr3D 580428783 580429304 521 True 263.0 322 85.8845 966 1651 2 chr3D.!!$R2 685
4 TraesCS1A01G315500 chr3A 223706656 223707272 616 True 311.0 335 85.6690 966 1746 2 chr3A.!!$R5 780
5 TraesCS1A01G315500 chr5D 168714133 168714654 521 True 284.5 326 87.7620 966 1651 2 chr5D.!!$R2 685

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
251 252 0.114954 ACCATGCCTTCCACCAATGT 59.885 50.0 0.00 0.00 0.00 2.71 F
1853 1924 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.0 14.79 0.04 33.41 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1925 1996 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.0 14.79 0.04 33.41 4.30 R
3283 3442 0.742281 AGCAGCAGTTAGGCATCACG 60.742 55.0 0.00 0.00 35.83 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.609747 ACCTTTCTACACCTGAGCTCA 58.390 47.619 17.19 17.19 0.00 4.26
21 22 3.177228 ACCTTTCTACACCTGAGCTCAT 58.823 45.455 18.63 4.63 0.00 2.90
22 23 4.353777 ACCTTTCTACACCTGAGCTCATA 58.646 43.478 18.63 5.70 0.00 2.15
23 24 4.777896 ACCTTTCTACACCTGAGCTCATAA 59.222 41.667 18.63 0.24 0.00 1.90
24 25 5.105146 ACCTTTCTACACCTGAGCTCATAAG 60.105 44.000 18.63 11.72 0.00 1.73
42 43 3.741029 GCTCCTGCTATGAACACGA 57.259 52.632 0.00 0.00 36.03 4.35
43 44 2.010145 GCTCCTGCTATGAACACGAA 57.990 50.000 0.00 0.00 36.03 3.85
44 45 2.346803 GCTCCTGCTATGAACACGAAA 58.653 47.619 0.00 0.00 36.03 3.46
45 46 2.742053 GCTCCTGCTATGAACACGAAAA 59.258 45.455 0.00 0.00 36.03 2.29
46 47 3.375299 GCTCCTGCTATGAACACGAAAAT 59.625 43.478 0.00 0.00 36.03 1.82
47 48 4.570772 GCTCCTGCTATGAACACGAAAATA 59.429 41.667 0.00 0.00 36.03 1.40
48 49 5.064707 GCTCCTGCTATGAACACGAAAATAA 59.935 40.000 0.00 0.00 36.03 1.40
49 50 6.403200 GCTCCTGCTATGAACACGAAAATAAA 60.403 38.462 0.00 0.00 36.03 1.40
50 51 7.624360 TCCTGCTATGAACACGAAAATAAAT 57.376 32.000 0.00 0.00 0.00 1.40
51 52 8.725405 TCCTGCTATGAACACGAAAATAAATA 57.275 30.769 0.00 0.00 0.00 1.40
52 53 9.168451 TCCTGCTATGAACACGAAAATAAATAA 57.832 29.630 0.00 0.00 0.00 1.40
53 54 9.781834 CCTGCTATGAACACGAAAATAAATAAA 57.218 29.630 0.00 0.00 0.00 1.40
112 113 9.606631 TTTTTGTGGCATACTTTAAGAAATGTT 57.393 25.926 0.00 0.00 0.00 2.71
113 114 9.606631 TTTTGTGGCATACTTTAAGAAATGTTT 57.393 25.926 0.00 0.00 0.00 2.83
124 125 8.711457 ACTTTAAGAAATGTTTATTGTGCATGC 58.289 29.630 11.82 11.82 0.00 4.06
125 126 8.599055 TTTAAGAAATGTTTATTGTGCATGCA 57.401 26.923 18.46 18.46 0.00 3.96
126 127 8.599055 TTAAGAAATGTTTATTGTGCATGCAA 57.401 26.923 24.58 8.53 0.00 4.08
127 128 7.493743 AAGAAATGTTTATTGTGCATGCAAA 57.506 28.000 24.58 15.92 31.63 3.68
128 129 7.493743 AGAAATGTTTATTGTGCATGCAAAA 57.506 28.000 25.07 25.07 31.63 2.44
129 130 8.101654 AGAAATGTTTATTGTGCATGCAAAAT 57.898 26.923 32.90 32.90 37.59 1.82
130 131 8.569641 AGAAATGTTTATTGTGCATGCAAAATT 58.430 25.926 34.84 19.62 35.65 1.82
131 132 9.182933 GAAATGTTTATTGTGCATGCAAAATTT 57.817 25.926 34.84 24.17 35.65 1.82
132 133 8.730970 AATGTTTATTGTGCATGCAAAATTTC 57.269 26.923 34.84 24.85 35.65 2.17
133 134 7.255491 TGTTTATTGTGCATGCAAAATTTCA 57.745 28.000 34.84 26.59 35.65 2.69
134 135 7.872881 TGTTTATTGTGCATGCAAAATTTCAT 58.127 26.923 34.84 18.11 35.65 2.57
135 136 8.350722 TGTTTATTGTGCATGCAAAATTTCATT 58.649 25.926 34.84 19.65 35.65 2.57
136 137 9.823098 GTTTATTGTGCATGCAAAATTTCATTA 57.177 25.926 34.84 17.41 35.65 1.90
137 138 9.823098 TTTATTGTGCATGCAAAATTTCATTAC 57.177 25.926 34.84 14.35 35.65 1.89
138 139 5.512573 TGTGCATGCAAAATTTCATTACG 57.487 34.783 24.58 0.00 0.00 3.18
139 140 5.225642 TGTGCATGCAAAATTTCATTACGA 58.774 33.333 24.58 0.00 0.00 3.43
140 141 5.693555 TGTGCATGCAAAATTTCATTACGAA 59.306 32.000 24.58 0.00 0.00 3.85
153 154 5.559427 TCATTACGAAATCACATTGGTGG 57.441 39.130 0.00 0.00 45.32 4.61
154 155 5.249420 TCATTACGAAATCACATTGGTGGA 58.751 37.500 0.00 0.00 45.32 4.02
155 156 5.353956 TCATTACGAAATCACATTGGTGGAG 59.646 40.000 0.00 0.00 45.32 3.86
156 157 2.436417 ACGAAATCACATTGGTGGAGG 58.564 47.619 0.00 0.00 45.32 4.30
157 158 2.224769 ACGAAATCACATTGGTGGAGGT 60.225 45.455 0.00 0.00 45.32 3.85
158 159 2.420022 CGAAATCACATTGGTGGAGGTC 59.580 50.000 0.00 0.00 45.32 3.85
159 160 2.113860 AATCACATTGGTGGAGGTCG 57.886 50.000 0.00 0.00 45.32 4.79
160 161 0.984230 ATCACATTGGTGGAGGTCGT 59.016 50.000 0.00 0.00 45.32 4.34
161 162 0.320374 TCACATTGGTGGAGGTCGTC 59.680 55.000 0.00 0.00 45.32 4.20
162 163 1.014044 CACATTGGTGGAGGTCGTCG 61.014 60.000 0.00 0.00 41.45 5.12
163 164 2.100631 CATTGGTGGAGGTCGTCGC 61.101 63.158 0.00 0.00 0.00 5.19
164 165 2.579657 ATTGGTGGAGGTCGTCGCA 61.580 57.895 0.00 0.00 0.00 5.10
165 166 2.107041 ATTGGTGGAGGTCGTCGCAA 62.107 55.000 0.00 0.00 0.00 4.85
166 167 2.029964 GGTGGAGGTCGTCGCAAA 59.970 61.111 0.00 0.00 0.00 3.68
167 168 1.595929 GGTGGAGGTCGTCGCAAAA 60.596 57.895 0.00 0.00 0.00 2.44
168 169 1.161563 GGTGGAGGTCGTCGCAAAAA 61.162 55.000 0.00 0.00 0.00 1.94
191 192 3.498927 AAATCAGAGCTCCAAAATGCG 57.501 42.857 10.93 0.00 0.00 4.73
192 193 2.119801 ATCAGAGCTCCAAAATGCGT 57.880 45.000 10.93 0.00 0.00 5.24
193 194 1.896220 TCAGAGCTCCAAAATGCGTT 58.104 45.000 10.93 0.00 0.00 4.84
194 195 2.229792 TCAGAGCTCCAAAATGCGTTT 58.770 42.857 10.93 0.00 0.00 3.60
195 196 2.030893 TCAGAGCTCCAAAATGCGTTTG 60.031 45.455 10.93 5.20 45.36 2.93
210 211 7.763172 AATGCGTTTGAAAGTAACATTTTCA 57.237 28.000 0.00 0.00 41.40 2.69
211 212 6.804534 TGCGTTTGAAAGTAACATTTTCAG 57.195 33.333 1.37 0.00 43.22 3.02
212 213 6.556212 TGCGTTTGAAAGTAACATTTTCAGA 58.444 32.000 1.37 0.00 43.22 3.27
213 214 6.690957 TGCGTTTGAAAGTAACATTTTCAGAG 59.309 34.615 1.37 0.01 43.22 3.35
214 215 6.691388 GCGTTTGAAAGTAACATTTTCAGAGT 59.309 34.615 1.37 0.00 43.22 3.24
215 216 7.853929 GCGTTTGAAAGTAACATTTTCAGAGTA 59.146 33.333 1.37 0.00 43.22 2.59
216 217 9.878599 CGTTTGAAAGTAACATTTTCAGAGTAT 57.121 29.630 1.37 0.00 43.22 2.12
247 248 2.685106 TTTTACCATGCCTTCCACCA 57.315 45.000 0.00 0.00 0.00 4.17
248 249 2.685106 TTTACCATGCCTTCCACCAA 57.315 45.000 0.00 0.00 0.00 3.67
249 250 2.917713 TTACCATGCCTTCCACCAAT 57.082 45.000 0.00 0.00 0.00 3.16
250 251 2.142356 TACCATGCCTTCCACCAATG 57.858 50.000 0.00 0.00 0.00 2.82
251 252 0.114954 ACCATGCCTTCCACCAATGT 59.885 50.000 0.00 0.00 0.00 2.71
252 253 0.819582 CCATGCCTTCCACCAATGTC 59.180 55.000 0.00 0.00 0.00 3.06
253 254 1.548081 CATGCCTTCCACCAATGTCA 58.452 50.000 0.00 0.00 0.00 3.58
254 255 2.104967 CATGCCTTCCACCAATGTCAT 58.895 47.619 0.00 0.00 0.00 3.06
255 256 2.307496 TGCCTTCCACCAATGTCATT 57.693 45.000 0.00 0.00 0.00 2.57
256 257 2.607499 TGCCTTCCACCAATGTCATTT 58.393 42.857 0.00 0.00 0.00 2.32
257 258 2.562298 TGCCTTCCACCAATGTCATTTC 59.438 45.455 0.00 0.00 0.00 2.17
258 259 2.562298 GCCTTCCACCAATGTCATTTCA 59.438 45.455 0.00 0.00 0.00 2.69
259 260 3.196254 GCCTTCCACCAATGTCATTTCAT 59.804 43.478 0.00 0.00 0.00 2.57
260 261 4.751060 CCTTCCACCAATGTCATTTCATG 58.249 43.478 0.00 0.00 0.00 3.07
261 262 4.463539 CCTTCCACCAATGTCATTTCATGA 59.536 41.667 0.00 0.00 36.84 3.07
262 263 5.128171 CCTTCCACCAATGTCATTTCATGAT 59.872 40.000 0.00 0.00 42.04 2.45
263 264 5.585820 TCCACCAATGTCATTTCATGATG 57.414 39.130 0.00 0.00 42.04 3.07
264 265 5.262804 TCCACCAATGTCATTTCATGATGA 58.737 37.500 0.00 0.00 42.04 2.92
265 266 5.715753 TCCACCAATGTCATTTCATGATGAA 59.284 36.000 3.29 3.29 42.04 2.57
277 278 6.803154 TTTCATGATGAAATTTTGCATGCA 57.197 29.167 18.46 18.46 41.02 3.96
278 279 5.788055 TCATGATGAAATTTTGCATGCAC 57.212 34.783 22.58 8.45 37.01 4.57
279 280 5.238583 TCATGATGAAATTTTGCATGCACA 58.761 33.333 22.58 12.14 37.01 4.57
280 281 5.701290 TCATGATGAAATTTTGCATGCACAA 59.299 32.000 22.58 21.53 37.01 3.33
281 282 5.345609 TGATGAAATTTTGCATGCACAAC 57.654 34.783 22.58 13.02 0.00 3.32
282 283 4.814771 TGATGAAATTTTGCATGCACAACA 59.185 33.333 22.58 15.52 0.00 3.33
283 284 5.296035 TGATGAAATTTTGCATGCACAACAA 59.704 32.000 22.58 9.42 0.00 2.83
284 285 5.556355 TGAAATTTTGCATGCACAACAAA 57.444 30.435 22.58 18.36 0.00 2.83
285 286 5.330295 TGAAATTTTGCATGCACAACAAAC 58.670 33.333 22.58 12.75 33.29 2.93
286 287 4.959596 AATTTTGCATGCACAACAAACA 57.040 31.818 22.58 0.00 33.29 2.83
287 288 5.502153 AATTTTGCATGCACAACAAACAT 57.498 30.435 22.58 8.21 33.29 2.71
288 289 4.959596 TTTTGCATGCACAACAAACATT 57.040 31.818 22.58 0.00 33.29 2.71
289 290 4.959596 TTTGCATGCACAACAAACATTT 57.040 31.818 22.58 0.00 0.00 2.32
290 291 4.533225 TTGCATGCACAACAAACATTTC 57.467 36.364 22.58 0.00 0.00 2.17
291 292 3.794717 TGCATGCACAACAAACATTTCT 58.205 36.364 18.46 0.00 0.00 2.52
292 293 4.190001 TGCATGCACAACAAACATTTCTT 58.810 34.783 18.46 0.00 0.00 2.52
293 294 5.354767 TGCATGCACAACAAACATTTCTTA 58.645 33.333 18.46 0.00 0.00 2.10
294 295 5.814188 TGCATGCACAACAAACATTTCTTAA 59.186 32.000 18.46 0.00 0.00 1.85
295 296 6.314648 TGCATGCACAACAAACATTTCTTAAA 59.685 30.769 18.46 0.00 0.00 1.52
296 297 6.847289 GCATGCACAACAAACATTTCTTAAAG 59.153 34.615 14.21 0.00 0.00 1.85
297 298 7.465781 GCATGCACAACAAACATTTCTTAAAGT 60.466 33.333 14.21 0.00 0.00 2.66
298 299 9.029243 CATGCACAACAAACATTTCTTAAAGTA 57.971 29.630 0.00 0.00 0.00 2.24
299 300 9.762933 ATGCACAACAAACATTTCTTAAAGTAT 57.237 25.926 0.00 0.00 0.00 2.12
300 301 9.029243 TGCACAACAAACATTTCTTAAAGTATG 57.971 29.630 0.00 0.00 0.00 2.39
301 302 8.003784 GCACAACAAACATTTCTTAAAGTATGC 58.996 33.333 0.00 0.00 0.00 3.14
302 303 8.487176 CACAACAAACATTTCTTAAAGTATGCC 58.513 33.333 0.00 0.00 0.00 4.40
303 304 8.200792 ACAACAAACATTTCTTAAAGTATGCCA 58.799 29.630 0.00 0.00 0.00 4.92
304 305 8.487176 CAACAAACATTTCTTAAAGTATGCCAC 58.513 33.333 0.00 0.00 0.00 5.01
305 306 6.861055 ACAAACATTTCTTAAAGTATGCCACG 59.139 34.615 0.00 0.00 0.00 4.94
306 307 6.569179 AACATTTCTTAAAGTATGCCACGT 57.431 33.333 0.00 0.00 0.00 4.49
307 308 6.178239 ACATTTCTTAAAGTATGCCACGTC 57.822 37.500 0.00 0.00 0.00 4.34
308 309 5.123344 ACATTTCTTAAAGTATGCCACGTCC 59.877 40.000 0.00 0.00 0.00 4.79
309 310 3.965379 TCTTAAAGTATGCCACGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
310 311 4.481368 TCTTAAAGTATGCCACGTCCAT 57.519 40.909 3.94 3.94 0.00 3.41
311 312 4.839121 TCTTAAAGTATGCCACGTCCATT 58.161 39.130 3.80 0.00 0.00 3.16
312 313 5.250200 TCTTAAAGTATGCCACGTCCATTT 58.750 37.500 3.80 0.00 0.00 2.32
313 314 3.848272 AAAGTATGCCACGTCCATTTG 57.152 42.857 3.80 0.00 0.00 2.32
314 315 2.779755 AGTATGCCACGTCCATTTGA 57.220 45.000 3.80 0.00 0.00 2.69
315 316 3.066291 AGTATGCCACGTCCATTTGAA 57.934 42.857 3.80 0.00 0.00 2.69
316 317 3.417101 AGTATGCCACGTCCATTTGAAA 58.583 40.909 3.80 0.00 0.00 2.69
317 318 3.440173 AGTATGCCACGTCCATTTGAAAG 59.560 43.478 3.80 0.00 0.00 2.62
318 319 1.686355 TGCCACGTCCATTTGAAAGT 58.314 45.000 0.00 0.00 0.00 2.66
319 320 2.852449 TGCCACGTCCATTTGAAAGTA 58.148 42.857 0.00 0.00 0.00 2.24
320 321 3.215151 TGCCACGTCCATTTGAAAGTAA 58.785 40.909 0.00 0.00 0.00 2.24
321 322 3.003897 TGCCACGTCCATTTGAAAGTAAC 59.996 43.478 0.00 0.00 0.00 2.50
322 323 3.003897 GCCACGTCCATTTGAAAGTAACA 59.996 43.478 0.00 0.00 0.00 2.41
323 324 4.498345 GCCACGTCCATTTGAAAGTAACAA 60.498 41.667 0.00 0.00 0.00 2.83
324 325 5.768317 CCACGTCCATTTGAAAGTAACAAT 58.232 37.500 0.00 0.00 0.00 2.71
325 326 6.212955 CCACGTCCATTTGAAAGTAACAATT 58.787 36.000 0.00 0.00 0.00 2.32
326 327 6.143758 CCACGTCCATTTGAAAGTAACAATTG 59.856 38.462 3.24 3.24 0.00 2.32
327 328 6.695278 CACGTCCATTTGAAAGTAACAATTGT 59.305 34.615 4.92 4.92 31.19 2.71
328 329 7.221838 CACGTCCATTTGAAAGTAACAATTGTT 59.778 33.333 25.99 25.99 41.73 2.83
329 330 7.762159 ACGTCCATTTGAAAGTAACAATTGTTT 59.238 29.630 27.66 10.94 39.31 2.83
330 331 8.599774 CGTCCATTTGAAAGTAACAATTGTTTT 58.400 29.630 27.66 16.59 39.31 2.43
365 366 7.553881 TTATTTTACTGTTCATAGCAGGAGC 57.446 36.000 0.00 0.00 38.22 4.70
366 367 4.551702 TTTACTGTTCATAGCAGGAGCA 57.448 40.909 0.00 0.00 45.49 4.26
367 368 4.760530 TTACTGTTCATAGCAGGAGCAT 57.239 40.909 0.00 0.00 45.49 3.79
368 369 5.869649 TTACTGTTCATAGCAGGAGCATA 57.130 39.130 0.00 0.00 45.49 3.14
369 370 4.970860 ACTGTTCATAGCAGGAGCATAT 57.029 40.909 0.00 0.00 45.49 1.78
370 371 4.639334 ACTGTTCATAGCAGGAGCATATG 58.361 43.478 0.00 0.00 45.49 1.78
371 372 4.346127 ACTGTTCATAGCAGGAGCATATGA 59.654 41.667 6.97 0.00 45.49 2.15
372 373 4.891260 TGTTCATAGCAGGAGCATATGAG 58.109 43.478 6.97 0.00 45.49 2.90
373 374 3.606595 TCATAGCAGGAGCATATGAGC 57.393 47.619 6.97 1.86 45.49 4.26
386 387 6.924913 AGCATATGAGCTCAGGTATAGAAA 57.075 37.500 22.96 0.00 42.18 2.52
387 388 6.696411 AGCATATGAGCTCAGGTATAGAAAC 58.304 40.000 22.96 3.23 42.18 2.78
388 389 6.496565 AGCATATGAGCTCAGGTATAGAAACT 59.503 38.462 22.96 2.84 42.18 2.66
389 390 6.811170 GCATATGAGCTCAGGTATAGAAACTC 59.189 42.308 22.96 0.00 0.00 3.01
390 391 5.799827 ATGAGCTCAGGTATAGAAACTCC 57.200 43.478 22.96 0.00 0.00 3.85
391 392 4.610333 TGAGCTCAGGTATAGAAACTCCA 58.390 43.478 13.74 0.00 0.00 3.86
392 393 4.402793 TGAGCTCAGGTATAGAAACTCCAC 59.597 45.833 13.74 0.00 0.00 4.02
393 394 3.381908 AGCTCAGGTATAGAAACTCCACG 59.618 47.826 0.00 0.00 0.00 4.94
394 395 3.130693 GCTCAGGTATAGAAACTCCACGT 59.869 47.826 0.00 0.00 0.00 4.49
395 396 4.734108 GCTCAGGTATAGAAACTCCACGTC 60.734 50.000 0.00 0.00 0.00 4.34
396 397 3.698040 TCAGGTATAGAAACTCCACGTCC 59.302 47.826 0.00 0.00 0.00 4.79
397 398 2.686915 AGGTATAGAAACTCCACGTCCG 59.313 50.000 0.00 0.00 0.00 4.79
398 399 2.223665 GGTATAGAAACTCCACGTCCGG 60.224 54.545 0.00 0.00 0.00 5.14
399 400 1.553706 ATAGAAACTCCACGTCCGGT 58.446 50.000 0.00 0.00 0.00 5.28
400 401 0.599558 TAGAAACTCCACGTCCGGTG 59.400 55.000 0.00 0.00 46.57 4.94
408 409 4.309950 ACGTCCGGTGAAGGGCAC 62.310 66.667 0.00 0.00 46.98 5.01
409 410 4.003788 CGTCCGGTGAAGGGCACT 62.004 66.667 0.00 0.00 46.86 4.40
410 411 2.430367 GTCCGGTGAAGGGCACTT 59.570 61.111 0.00 0.00 46.86 3.16
411 412 1.228154 GTCCGGTGAAGGGCACTTT 60.228 57.895 0.84 0.00 46.86 2.66
412 413 1.072505 TCCGGTGAAGGGCACTTTC 59.927 57.895 0.84 0.00 46.86 2.62
413 414 1.073199 CCGGTGAAGGGCACTTTCT 59.927 57.895 0.84 0.00 46.86 2.52
414 415 0.537371 CCGGTGAAGGGCACTTTCTT 60.537 55.000 0.84 0.00 46.86 2.52
415 416 1.318576 CGGTGAAGGGCACTTTCTTT 58.681 50.000 0.84 0.00 46.86 2.52
416 417 1.681264 CGGTGAAGGGCACTTTCTTTT 59.319 47.619 0.84 0.00 46.86 2.27
417 418 2.543653 CGGTGAAGGGCACTTTCTTTTG 60.544 50.000 0.84 0.00 46.86 2.44
418 419 2.693074 GGTGAAGGGCACTTTCTTTTGA 59.307 45.455 0.84 0.00 46.86 2.69
419 420 3.321968 GGTGAAGGGCACTTTCTTTTGAT 59.678 43.478 0.84 0.00 46.86 2.57
420 421 4.550422 GTGAAGGGCACTTTCTTTTGATC 58.450 43.478 0.84 0.00 44.27 2.92
421 422 3.573967 TGAAGGGCACTTTCTTTTGATCC 59.426 43.478 0.84 0.00 36.97 3.36
422 423 2.529632 AGGGCACTTTCTTTTGATCCC 58.470 47.619 0.00 0.00 0.00 3.85
423 424 2.158325 AGGGCACTTTCTTTTGATCCCA 60.158 45.455 0.00 0.00 35.03 4.37
424 425 2.232208 GGGCACTTTCTTTTGATCCCAG 59.768 50.000 0.00 0.00 32.89 4.45
425 426 2.893489 GGCACTTTCTTTTGATCCCAGT 59.107 45.455 0.00 0.00 0.00 4.00
426 427 3.321968 GGCACTTTCTTTTGATCCCAGTT 59.678 43.478 0.00 0.00 0.00 3.16
427 428 4.202253 GGCACTTTCTTTTGATCCCAGTTT 60.202 41.667 0.00 0.00 0.00 2.66
428 429 4.984785 GCACTTTCTTTTGATCCCAGTTTC 59.015 41.667 0.00 0.00 0.00 2.78
429 430 5.451798 GCACTTTCTTTTGATCCCAGTTTCA 60.452 40.000 0.00 0.00 0.00 2.69
430 431 6.739565 GCACTTTCTTTTGATCCCAGTTTCAT 60.740 38.462 0.00 0.00 0.00 2.57
431 432 7.523709 GCACTTTCTTTTGATCCCAGTTTCATA 60.524 37.037 0.00 0.00 0.00 2.15
432 433 8.025445 CACTTTCTTTTGATCCCAGTTTCATAG 58.975 37.037 0.00 0.00 0.00 2.23
433 434 7.725844 ACTTTCTTTTGATCCCAGTTTCATAGT 59.274 33.333 0.00 0.00 0.00 2.12
434 435 7.687941 TTCTTTTGATCCCAGTTTCATAGTC 57.312 36.000 0.00 0.00 0.00 2.59
435 436 6.778821 TCTTTTGATCCCAGTTTCATAGTCA 58.221 36.000 0.00 0.00 0.00 3.41
436 437 7.405292 TCTTTTGATCCCAGTTTCATAGTCAT 58.595 34.615 0.00 0.00 0.00 3.06
437 438 7.890127 TCTTTTGATCCCAGTTTCATAGTCATT 59.110 33.333 0.00 0.00 0.00 2.57
438 439 8.421249 TTTTGATCCCAGTTTCATAGTCATTT 57.579 30.769 0.00 0.00 0.00 2.32
439 440 8.421249 TTTGATCCCAGTTTCATAGTCATTTT 57.579 30.769 0.00 0.00 0.00 1.82
440 441 8.421249 TTGATCCCAGTTTCATAGTCATTTTT 57.579 30.769 0.00 0.00 0.00 1.94
460 461 5.418310 TTTTGCTTGTTCAGTACTACTGC 57.582 39.130 10.92 1.66 45.54 4.40
461 462 3.040147 TGCTTGTTCAGTACTACTGCC 57.960 47.619 10.92 5.35 45.54 4.85
462 463 2.632996 TGCTTGTTCAGTACTACTGCCT 59.367 45.455 10.92 0.00 45.54 4.75
463 464 3.254892 GCTTGTTCAGTACTACTGCCTC 58.745 50.000 10.92 5.18 45.54 4.70
464 465 3.851098 CTTGTTCAGTACTACTGCCTCC 58.149 50.000 10.92 0.81 45.54 4.30
465 466 2.884320 TGTTCAGTACTACTGCCTCCA 58.116 47.619 10.92 3.04 45.54 3.86
466 467 3.441101 TGTTCAGTACTACTGCCTCCAT 58.559 45.455 10.92 0.00 45.54 3.41
467 468 3.838317 TGTTCAGTACTACTGCCTCCATT 59.162 43.478 10.92 0.00 45.54 3.16
468 469 4.081642 TGTTCAGTACTACTGCCTCCATTC 60.082 45.833 10.92 0.00 45.54 2.67
469 470 3.031736 TCAGTACTACTGCCTCCATTCC 58.968 50.000 10.92 0.00 45.54 3.01
470 471 3.034635 CAGTACTACTGCCTCCATTCCT 58.965 50.000 3.21 0.00 39.62 3.36
471 472 4.079385 TCAGTACTACTGCCTCCATTCCTA 60.079 45.833 10.92 0.00 45.54 2.94
472 473 4.649674 CAGTACTACTGCCTCCATTCCTAA 59.350 45.833 3.21 0.00 39.62 2.69
473 474 5.128827 CAGTACTACTGCCTCCATTCCTAAA 59.871 44.000 3.21 0.00 39.62 1.85
474 475 5.724854 AGTACTACTGCCTCCATTCCTAAAA 59.275 40.000 0.00 0.00 0.00 1.52
475 476 5.104259 ACTACTGCCTCCATTCCTAAAAG 57.896 43.478 0.00 0.00 0.00 2.27
476 477 3.372440 ACTGCCTCCATTCCTAAAAGG 57.628 47.619 0.00 0.00 36.46 3.11
477 478 2.024941 ACTGCCTCCATTCCTAAAAGGG 60.025 50.000 0.00 0.00 35.59 3.95
478 479 1.287739 TGCCTCCATTCCTAAAAGGGG 59.712 52.381 0.00 0.00 35.59 4.79
479 480 1.288037 GCCTCCATTCCTAAAAGGGGT 59.712 52.381 0.00 0.00 35.59 4.95
480 481 2.512476 GCCTCCATTCCTAAAAGGGGTA 59.488 50.000 0.00 0.00 35.59 3.69
481 482 3.435169 GCCTCCATTCCTAAAAGGGGTAG 60.435 52.174 0.00 0.00 35.59 3.18
482 483 4.045022 CCTCCATTCCTAAAAGGGGTAGA 58.955 47.826 0.00 0.00 35.59 2.59
483 484 4.141459 CCTCCATTCCTAAAAGGGGTAGAC 60.141 50.000 0.00 0.00 35.59 2.59
484 485 4.706616 TCCATTCCTAAAAGGGGTAGACT 58.293 43.478 0.00 0.00 35.59 3.24
485 486 5.857134 TCCATTCCTAAAAGGGGTAGACTA 58.143 41.667 0.00 0.00 35.59 2.59
486 487 6.273889 TCCATTCCTAAAAGGGGTAGACTAA 58.726 40.000 0.00 0.00 35.59 2.24
487 488 6.912561 TCCATTCCTAAAAGGGGTAGACTAAT 59.087 38.462 0.00 0.00 35.59 1.73
488 489 7.407918 TCCATTCCTAAAAGGGGTAGACTAATT 59.592 37.037 0.00 0.00 35.59 1.40
489 490 8.059461 CCATTCCTAAAAGGGGTAGACTAATTT 58.941 37.037 0.00 0.00 35.59 1.82
493 494 9.964354 TCCTAAAAGGGGTAGACTAATTTAAAC 57.036 33.333 0.00 0.00 35.59 2.01
494 495 9.970553 CCTAAAAGGGGTAGACTAATTTAAACT 57.029 33.333 0.00 0.00 0.00 2.66
496 497 7.698506 AAAGGGGTAGACTAATTTAAACTGC 57.301 36.000 0.00 0.00 0.00 4.40
497 498 6.382919 AGGGGTAGACTAATTTAAACTGCA 57.617 37.500 0.00 0.00 0.00 4.41
498 499 6.970191 AGGGGTAGACTAATTTAAACTGCAT 58.030 36.000 0.00 0.00 0.00 3.96
499 500 7.054751 AGGGGTAGACTAATTTAAACTGCATC 58.945 38.462 0.00 0.00 0.00 3.91
500 501 6.826741 GGGGTAGACTAATTTAAACTGCATCA 59.173 38.462 0.00 0.00 0.00 3.07
501 502 7.338449 GGGGTAGACTAATTTAAACTGCATCAA 59.662 37.037 0.00 0.00 0.00 2.57
502 503 8.182227 GGGTAGACTAATTTAAACTGCATCAAC 58.818 37.037 0.00 0.00 0.00 3.18
503 504 7.903431 GGTAGACTAATTTAAACTGCATCAACG 59.097 37.037 0.00 0.00 0.00 4.10
504 505 7.435068 AGACTAATTTAAACTGCATCAACGT 57.565 32.000 0.00 0.00 0.00 3.99
505 506 7.519002 AGACTAATTTAAACTGCATCAACGTC 58.481 34.615 0.00 0.00 0.00 4.34
506 507 7.387948 AGACTAATTTAAACTGCATCAACGTCT 59.612 33.333 0.00 0.00 0.00 4.18
507 508 7.871853 ACTAATTTAAACTGCATCAACGTCTT 58.128 30.769 0.00 0.00 0.00 3.01
508 509 8.995220 ACTAATTTAAACTGCATCAACGTCTTA 58.005 29.630 0.00 0.00 0.00 2.10
509 510 9.988350 CTAATTTAAACTGCATCAACGTCTTAT 57.012 29.630 0.00 0.00 0.00 1.73
511 512 9.988350 AATTTAAACTGCATCAACGTCTTATAG 57.012 29.630 0.00 0.00 0.00 1.31
512 513 8.542497 TTTAAACTGCATCAACGTCTTATAGT 57.458 30.769 0.00 0.00 0.00 2.12
513 514 8.542497 TTAAACTGCATCAACGTCTTATAGTT 57.458 30.769 0.00 0.00 0.00 2.24
514 515 9.642327 TTAAACTGCATCAACGTCTTATAGTTA 57.358 29.630 0.00 0.00 0.00 2.24
515 516 7.757097 AACTGCATCAACGTCTTATAGTTAG 57.243 36.000 0.00 0.00 0.00 2.34
516 517 6.273825 ACTGCATCAACGTCTTATAGTTAGG 58.726 40.000 0.00 0.00 0.00 2.69
517 518 6.096423 ACTGCATCAACGTCTTATAGTTAGGA 59.904 38.462 0.00 0.00 0.00 2.94
518 519 6.869695 TGCATCAACGTCTTATAGTTAGGAA 58.130 36.000 0.00 0.00 0.00 3.36
519 520 7.497595 TGCATCAACGTCTTATAGTTAGGAAT 58.502 34.615 0.00 0.00 0.00 3.01
520 521 7.438160 TGCATCAACGTCTTATAGTTAGGAATG 59.562 37.037 0.00 0.00 0.00 2.67
521 522 7.652105 GCATCAACGTCTTATAGTTAGGAATGA 59.348 37.037 0.00 0.00 0.00 2.57
522 523 9.529325 CATCAACGTCTTATAGTTAGGAATGAA 57.471 33.333 0.00 0.00 0.00 2.57
523 524 9.751542 ATCAACGTCTTATAGTTAGGAATGAAG 57.248 33.333 0.00 0.00 0.00 3.02
524 525 8.195436 TCAACGTCTTATAGTTAGGAATGAAGG 58.805 37.037 0.00 0.00 0.00 3.46
525 526 7.657023 ACGTCTTATAGTTAGGAATGAAGGT 57.343 36.000 0.00 0.00 0.00 3.50
526 527 8.757982 ACGTCTTATAGTTAGGAATGAAGGTA 57.242 34.615 0.00 0.00 0.00 3.08
527 528 9.193806 ACGTCTTATAGTTAGGAATGAAGGTAA 57.806 33.333 0.00 0.00 0.00 2.85
562 563 9.783081 TGTTACTGGTATTATACGAGTATCTCA 57.217 33.333 21.73 18.11 45.26 3.27
564 565 9.783081 TTACTGGTATTATACGAGTATCTCACA 57.217 33.333 21.73 8.46 45.26 3.58
565 566 8.687292 ACTGGTATTATACGAGTATCTCACAA 57.313 34.615 16.43 0.00 44.33 3.33
566 567 8.784994 ACTGGTATTATACGAGTATCTCACAAG 58.215 37.037 16.43 2.55 44.33 3.16
567 568 8.687292 TGGTATTATACGAGTATCTCACAAGT 57.313 34.615 0.00 0.00 0.00 3.16
568 569 9.128404 TGGTATTATACGAGTATCTCACAAGTT 57.872 33.333 0.00 0.00 0.00 2.66
569 570 9.609950 GGTATTATACGAGTATCTCACAAGTTC 57.390 37.037 0.00 0.00 0.00 3.01
597 598 8.908786 TTTTCTTGGGCATAATATACTCTCAG 57.091 34.615 0.00 0.00 0.00 3.35
598 599 7.618019 TTCTTGGGCATAATATACTCTCAGT 57.382 36.000 0.00 0.00 0.00 3.41
599 600 7.233389 TCTTGGGCATAATATACTCTCAGTC 57.767 40.000 0.00 0.00 0.00 3.51
600 601 7.013220 TCTTGGGCATAATATACTCTCAGTCT 58.987 38.462 0.00 0.00 0.00 3.24
601 602 6.842437 TGGGCATAATATACTCTCAGTCTC 57.158 41.667 0.00 0.00 0.00 3.36
602 603 6.314917 TGGGCATAATATACTCTCAGTCTCA 58.685 40.000 0.00 0.00 0.00 3.27
603 604 6.782494 TGGGCATAATATACTCTCAGTCTCAA 59.218 38.462 0.00 0.00 0.00 3.02
604 605 7.290014 TGGGCATAATATACTCTCAGTCTCAAA 59.710 37.037 0.00 0.00 0.00 2.69
605 606 8.150945 GGGCATAATATACTCTCAGTCTCAAAA 58.849 37.037 0.00 0.00 0.00 2.44
606 607 9.717942 GGCATAATATACTCTCAGTCTCAAAAT 57.282 33.333 0.00 0.00 0.00 1.82
614 615 6.153067 ACTCTCAGTCTCAAAATAAGTGTCG 58.847 40.000 0.00 0.00 0.00 4.35
615 616 4.923871 TCTCAGTCTCAAAATAAGTGTCGC 59.076 41.667 0.00 0.00 0.00 5.19
616 617 4.883083 TCAGTCTCAAAATAAGTGTCGCT 58.117 39.130 0.00 0.00 0.00 4.93
617 618 4.686091 TCAGTCTCAAAATAAGTGTCGCTG 59.314 41.667 0.00 0.00 0.00 5.18
618 619 4.686091 CAGTCTCAAAATAAGTGTCGCTGA 59.314 41.667 0.00 0.00 0.00 4.26
619 620 5.349817 CAGTCTCAAAATAAGTGTCGCTGAT 59.650 40.000 0.00 0.00 0.00 2.90
620 621 5.934625 AGTCTCAAAATAAGTGTCGCTGATT 59.065 36.000 0.00 0.00 29.37 2.57
621 622 6.428159 AGTCTCAAAATAAGTGTCGCTGATTT 59.572 34.615 3.21 3.21 39.41 2.17
622 623 7.602644 AGTCTCAAAATAAGTGTCGCTGATTTA 59.397 33.333 8.84 0.00 37.29 1.40
623 624 7.900352 GTCTCAAAATAAGTGTCGCTGATTTAG 59.100 37.037 8.84 4.87 37.29 1.85
624 625 7.602644 TCTCAAAATAAGTGTCGCTGATTTAGT 59.397 33.333 8.84 0.00 37.29 2.24
625 626 8.766000 TCAAAATAAGTGTCGCTGATTTAGTA 57.234 30.769 8.84 0.00 37.29 1.82
626 627 9.378551 TCAAAATAAGTGTCGCTGATTTAGTAT 57.621 29.630 8.84 0.00 37.29 2.12
654 655 5.886960 ATGAAAGTATCTCACAAGGTTGC 57.113 39.130 0.00 0.00 0.00 4.17
655 656 4.973168 TGAAAGTATCTCACAAGGTTGCT 58.027 39.130 0.00 0.00 0.00 3.91
656 657 5.376625 TGAAAGTATCTCACAAGGTTGCTT 58.623 37.500 0.00 0.00 0.00 3.91
657 658 6.530120 TGAAAGTATCTCACAAGGTTGCTTA 58.470 36.000 0.00 0.00 0.00 3.09
658 659 6.650807 TGAAAGTATCTCACAAGGTTGCTTAG 59.349 38.462 0.00 0.00 0.00 2.18
659 660 6.360370 AAGTATCTCACAAGGTTGCTTAGA 57.640 37.500 0.00 0.00 0.00 2.10
660 661 6.552445 AGTATCTCACAAGGTTGCTTAGAT 57.448 37.500 0.00 0.00 32.50 1.98
661 662 7.661536 AGTATCTCACAAGGTTGCTTAGATA 57.338 36.000 0.00 0.00 31.18 1.98
662 663 8.079211 AGTATCTCACAAGGTTGCTTAGATAA 57.921 34.615 9.26 0.00 32.81 1.75
663 664 7.982354 AGTATCTCACAAGGTTGCTTAGATAAC 59.018 37.037 9.26 0.00 32.81 1.89
664 665 6.109156 TCTCACAAGGTTGCTTAGATAACA 57.891 37.500 0.00 0.00 0.00 2.41
665 666 6.166279 TCTCACAAGGTTGCTTAGATAACAG 58.834 40.000 0.00 0.00 0.00 3.16
666 667 5.245531 TCACAAGGTTGCTTAGATAACAGG 58.754 41.667 0.00 0.00 0.00 4.00
667 668 4.396166 CACAAGGTTGCTTAGATAACAGGG 59.604 45.833 0.00 0.00 0.00 4.45
668 669 4.042934 ACAAGGTTGCTTAGATAACAGGGT 59.957 41.667 0.00 0.00 0.00 4.34
669 670 4.929146 AGGTTGCTTAGATAACAGGGTT 57.071 40.909 0.00 0.00 0.00 4.11
670 671 5.256806 AGGTTGCTTAGATAACAGGGTTT 57.743 39.130 0.00 0.00 0.00 3.27
671 672 5.254115 AGGTTGCTTAGATAACAGGGTTTC 58.746 41.667 0.00 0.00 0.00 2.78
672 673 5.007682 GGTTGCTTAGATAACAGGGTTTCA 58.992 41.667 0.00 0.00 0.00 2.69
673 674 5.652452 GGTTGCTTAGATAACAGGGTTTCAT 59.348 40.000 0.00 0.00 0.00 2.57
674 675 6.826741 GGTTGCTTAGATAACAGGGTTTCATA 59.173 38.462 0.00 0.00 0.00 2.15
675 676 7.338449 GGTTGCTTAGATAACAGGGTTTCATAA 59.662 37.037 0.00 0.00 0.00 1.90
676 677 8.736244 GTTGCTTAGATAACAGGGTTTCATAAA 58.264 33.333 0.00 0.00 0.00 1.40
677 678 9.474313 TTGCTTAGATAACAGGGTTTCATAAAT 57.526 29.630 0.00 0.00 0.00 1.40
678 679 9.120538 TGCTTAGATAACAGGGTTTCATAAATC 57.879 33.333 0.00 0.00 0.00 2.17
679 680 8.568794 GCTTAGATAACAGGGTTTCATAAATCC 58.431 37.037 0.00 0.00 42.20 3.01
680 681 9.627123 CTTAGATAACAGGGTTTCATAAATCCA 57.373 33.333 4.59 0.00 44.41 3.41
681 682 7.881775 AGATAACAGGGTTTCATAAATCCAC 57.118 36.000 4.59 0.00 44.41 4.02
682 683 7.410174 AGATAACAGGGTTTCATAAATCCACA 58.590 34.615 4.59 0.00 44.41 4.17
683 684 8.061304 AGATAACAGGGTTTCATAAATCCACAT 58.939 33.333 4.59 0.00 44.41 3.21
684 685 6.933514 AACAGGGTTTCATAAATCCACATT 57.066 33.333 4.59 0.00 44.41 2.71
685 686 6.284891 ACAGGGTTTCATAAATCCACATTG 57.715 37.500 4.59 0.00 44.41 2.82
686 687 5.779771 ACAGGGTTTCATAAATCCACATTGT 59.220 36.000 4.59 0.00 44.41 2.71
687 688 6.269769 ACAGGGTTTCATAAATCCACATTGTT 59.730 34.615 4.59 0.00 44.41 2.83
688 689 7.453126 ACAGGGTTTCATAAATCCACATTGTTA 59.547 33.333 4.59 0.00 44.41 2.41
689 690 8.477256 CAGGGTTTCATAAATCCACATTGTTAT 58.523 33.333 4.59 0.00 44.41 1.89
690 691 9.045745 AGGGTTTCATAAATCCACATTGTTATT 57.954 29.630 4.59 0.00 44.41 1.40
691 692 9.313118 GGGTTTCATAAATCCACATTGTTATTC 57.687 33.333 0.00 0.00 41.48 1.75
731 732 3.791245 TCGGCATTGTTTTTCTTGCTTT 58.209 36.364 0.00 0.00 35.46 3.51
736 737 6.194463 GGCATTGTTTTTCTTGCTTTTTCTC 58.806 36.000 0.00 0.00 35.46 2.87
745 747 3.627577 TCTTGCTTTTTCTCTGCTTTCGT 59.372 39.130 0.00 0.00 0.00 3.85
784 788 0.250989 AAAAGATCCAAACCGGCCGA 60.251 50.000 30.73 5.29 33.14 5.54
793 797 2.086251 AAACCGGCCGACGTAGAACA 62.086 55.000 30.73 0.00 42.24 3.18
794 798 2.086251 AACCGGCCGACGTAGAACAA 62.086 55.000 30.73 0.00 42.24 2.83
795 799 1.153706 CCGGCCGACGTAGAACAAT 60.154 57.895 30.73 0.00 42.24 2.71
796 800 0.738412 CCGGCCGACGTAGAACAATT 60.738 55.000 30.73 0.00 42.24 2.32
799 803 1.392510 GGCCGACGTAGAACAATTGAC 59.607 52.381 13.59 5.89 0.00 3.18
800 804 1.392510 GCCGACGTAGAACAATTGACC 59.607 52.381 13.59 3.07 0.00 4.02
840 858 0.185175 AAAACTGAAACGGGCCCTCT 59.815 50.000 22.43 2.79 0.00 3.69
849 867 3.402681 GGGCCCTCTGCTGCTGTA 61.403 66.667 17.04 0.00 40.92 2.74
860 878 0.247736 GCTGCTGTACTGTAGCCACT 59.752 55.000 25.49 0.00 40.42 4.00
882 900 2.352229 CCACACGTTTGCAGCACG 60.352 61.111 16.55 16.55 43.52 5.34
884 902 4.250431 ACACGTTTGCAGCACGCC 62.250 61.111 17.71 0.00 41.53 5.68
1056 1077 3.080121 CTCTCCTCGCCCCTTGCT 61.080 66.667 0.00 0.00 38.05 3.91
1074 1095 3.073735 CTGTCGCTCTGCTCCCCT 61.074 66.667 0.00 0.00 0.00 4.79
1356 1425 7.618502 TCTACTTCAGAGCACTAGTTTCTAG 57.381 40.000 6.39 4.96 0.00 2.43
1358 1427 8.319881 TCTACTTCAGAGCACTAGTTTCTAGTA 58.680 37.037 8.77 9.86 0.00 1.82
1359 1428 7.148355 ACTTCAGAGCACTAGTTTCTAGTAC 57.852 40.000 8.77 4.49 0.00 2.73
1419 1488 2.470983 TTCATGTGTCCTCGCAATCA 57.529 45.000 0.00 0.00 37.62 2.57
1420 1489 2.470983 TCATGTGTCCTCGCAATCAA 57.529 45.000 0.00 0.00 37.62 2.57
1421 1490 2.989909 TCATGTGTCCTCGCAATCAAT 58.010 42.857 0.00 0.00 37.62 2.57
1422 1491 2.938451 TCATGTGTCCTCGCAATCAATC 59.062 45.455 0.00 0.00 37.62 2.67
1546 1615 3.760151 TCTGCATTTTGGGATTCAGACAG 59.240 43.478 0.00 0.00 0.00 3.51
1548 1617 3.256383 TGCATTTTGGGATTCAGACAGTG 59.744 43.478 0.00 0.00 0.00 3.66
1574 1643 5.086104 TGATTTCCTGTGGTTCTAGCTAC 57.914 43.478 0.00 0.00 0.00 3.58
1575 1644 4.777896 TGATTTCCTGTGGTTCTAGCTACT 59.222 41.667 0.00 0.00 0.00 2.57
1605 1676 1.459592 CAAGTTTCGGCCTTACTGTCG 59.540 52.381 0.00 0.00 0.00 4.35
1634 1705 3.189080 TGCTTGTTACAGATGATGCACAC 59.811 43.478 0.00 0.00 0.00 3.82
1635 1706 3.426695 GCTTGTTACAGATGATGCACACC 60.427 47.826 0.00 0.00 0.00 4.16
1645 1716 1.805943 TGATGCACACCATTCGTCAAG 59.194 47.619 0.00 0.00 33.29 3.02
1646 1717 1.806542 GATGCACACCATTCGTCAAGT 59.193 47.619 0.00 0.00 33.29 3.16
1657 1728 5.523916 ACCATTCGTCAAGTATCTAATGTGC 59.476 40.000 0.00 0.00 0.00 4.57
1697 1768 6.109359 GCAGATCTCCATAACCACCATATAC 58.891 44.000 0.00 0.00 0.00 1.47
1775 1846 1.007271 CTACAGCCCGGCGTATGAG 60.007 63.158 6.01 0.00 0.00 2.90
1821 1892 0.381801 GGTGACACTTGTGCAGGTTG 59.618 55.000 5.39 0.00 0.00 3.77
1839 1910 6.571925 GCAGGTTGCTACTACTTTGTACTACT 60.572 42.308 0.00 0.00 40.96 2.57
1840 1911 7.028361 CAGGTTGCTACTACTTTGTACTACTC 58.972 42.308 0.00 0.00 0.00 2.59
1841 1912 6.152492 AGGTTGCTACTACTTTGTACTACTCC 59.848 42.308 0.00 0.00 0.00 3.85
1842 1913 6.328714 GTTGCTACTACTTTGTACTACTCCC 58.671 44.000 0.00 0.00 0.00 4.30
1843 1914 5.824421 TGCTACTACTTTGTACTACTCCCT 58.176 41.667 0.00 0.00 0.00 4.20
1844 1915 5.884792 TGCTACTACTTTGTACTACTCCCTC 59.115 44.000 0.00 0.00 0.00 4.30
1845 1916 5.299028 GCTACTACTTTGTACTACTCCCTCC 59.701 48.000 0.00 0.00 0.00 4.30
1846 1917 4.268359 ACTACTTTGTACTACTCCCTCCG 58.732 47.826 0.00 0.00 0.00 4.63
1847 1918 3.166560 ACTTTGTACTACTCCCTCCGT 57.833 47.619 0.00 0.00 0.00 4.69
1848 1919 3.504375 ACTTTGTACTACTCCCTCCGTT 58.496 45.455 0.00 0.00 0.00 4.44
1849 1920 3.509184 ACTTTGTACTACTCCCTCCGTTC 59.491 47.826 0.00 0.00 0.00 3.95
1850 1921 1.742761 TGTACTACTCCCTCCGTTCG 58.257 55.000 0.00 0.00 0.00 3.95
1851 1922 1.020437 GTACTACTCCCTCCGTTCGG 58.980 60.000 4.74 4.74 0.00 4.30
1852 1923 0.911769 TACTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
1853 1924 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
1854 1925 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
1855 1926 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
1856 1927 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1857 1928 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1858 1929 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
1859 1930 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
1860 1931 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
1861 1932 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
1862 1933 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
1863 1934 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
1864 1935 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
1865 1936 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
1866 1937 3.495193 CGTTCGGAATTACTTGTCTCGA 58.505 45.455 0.00 0.00 0.00 4.04
1867 1938 3.916172 CGTTCGGAATTACTTGTCTCGAA 59.084 43.478 0.00 0.00 33.66 3.71
1868 1939 4.561606 CGTTCGGAATTACTTGTCTCGAAT 59.438 41.667 0.00 0.00 37.46 3.34
1869 1940 5.740569 CGTTCGGAATTACTTGTCTCGAATA 59.259 40.000 0.00 0.00 37.46 1.75
1870 1941 6.417044 CGTTCGGAATTACTTGTCTCGAATAT 59.583 38.462 0.00 0.00 37.46 1.28
1871 1942 7.556433 GTTCGGAATTACTTGTCTCGAATATG 58.444 38.462 0.00 0.00 37.46 1.78
1872 1943 6.213677 TCGGAATTACTTGTCTCGAATATGG 58.786 40.000 0.00 0.00 0.00 2.74
1873 1944 6.040054 TCGGAATTACTTGTCTCGAATATGGA 59.960 38.462 0.00 0.00 0.00 3.41
1874 1945 6.868864 CGGAATTACTTGTCTCGAATATGGAT 59.131 38.462 0.00 0.00 0.00 3.41
1875 1946 7.148738 CGGAATTACTTGTCTCGAATATGGATG 60.149 40.741 0.00 0.00 0.00 3.51
1876 1947 7.657761 GGAATTACTTGTCTCGAATATGGATGT 59.342 37.037 0.00 0.00 0.00 3.06
1877 1948 9.692749 GAATTACTTGTCTCGAATATGGATGTA 57.307 33.333 0.00 0.00 0.00 2.29
1879 1950 9.862371 ATTACTTGTCTCGAATATGGATGTATC 57.138 33.333 0.00 0.00 0.00 2.24
1880 1951 7.531857 ACTTGTCTCGAATATGGATGTATCT 57.468 36.000 0.00 0.00 0.00 1.98
1881 1952 8.637196 ACTTGTCTCGAATATGGATGTATCTA 57.363 34.615 0.00 0.00 0.00 1.98
1882 1953 8.735315 ACTTGTCTCGAATATGGATGTATCTAG 58.265 37.037 0.00 0.00 0.00 2.43
1883 1954 8.863872 TTGTCTCGAATATGGATGTATCTAGA 57.136 34.615 0.00 0.00 0.00 2.43
1884 1955 8.863872 TGTCTCGAATATGGATGTATCTAGAA 57.136 34.615 0.00 0.00 0.00 2.10
1885 1956 8.731605 TGTCTCGAATATGGATGTATCTAGAAC 58.268 37.037 0.00 0.00 0.00 3.01
1886 1957 8.952278 GTCTCGAATATGGATGTATCTAGAACT 58.048 37.037 0.00 0.00 0.00 3.01
1914 1985 8.783999 AATACGTCTAGATACATCTGTTTTCG 57.216 34.615 0.00 0.00 37.76 3.46
1915 1986 5.035443 ACGTCTAGATACATCTGTTTTCGC 58.965 41.667 0.00 0.00 37.76 4.70
1916 1987 4.144902 CGTCTAGATACATCTGTTTTCGCG 59.855 45.833 0.00 0.00 37.76 5.87
1917 1988 5.271625 GTCTAGATACATCTGTTTTCGCGA 58.728 41.667 3.71 3.71 37.76 5.87
1918 1989 5.171695 GTCTAGATACATCTGTTTTCGCGAC 59.828 44.000 9.15 0.00 37.76 5.19
1919 1990 3.845178 AGATACATCTGTTTTCGCGACA 58.155 40.909 9.15 0.00 35.42 4.35
1920 1991 4.242475 AGATACATCTGTTTTCGCGACAA 58.758 39.130 9.15 5.74 35.42 3.18
1921 1992 2.949714 ACATCTGTTTTCGCGACAAG 57.050 45.000 9.15 4.08 0.00 3.16
1922 1993 2.210116 ACATCTGTTTTCGCGACAAGT 58.790 42.857 9.15 0.00 0.00 3.16
1923 1994 3.386486 ACATCTGTTTTCGCGACAAGTA 58.614 40.909 9.15 0.00 0.00 2.24
1924 1995 3.805422 ACATCTGTTTTCGCGACAAGTAA 59.195 39.130 9.15 0.00 0.00 2.24
1925 1996 4.451096 ACATCTGTTTTCGCGACAAGTAAT 59.549 37.500 9.15 0.00 0.00 1.89
1926 1997 5.049680 ACATCTGTTTTCGCGACAAGTAATT 60.050 36.000 9.15 0.00 0.00 1.40
1927 1998 5.013861 TCTGTTTTCGCGACAAGTAATTC 57.986 39.130 9.15 0.00 0.00 2.17
1928 1999 4.084223 TCTGTTTTCGCGACAAGTAATTCC 60.084 41.667 9.15 0.00 0.00 3.01
1929 2000 3.150731 GTTTTCGCGACAAGTAATTCCG 58.849 45.455 9.15 0.00 0.00 4.30
1930 2001 2.350899 TTCGCGACAAGTAATTCCGA 57.649 45.000 9.15 0.00 0.00 4.55
1931 2002 2.350899 TCGCGACAAGTAATTCCGAA 57.649 45.000 3.71 0.00 0.00 4.30
1932 2003 1.987770 TCGCGACAAGTAATTCCGAAC 59.012 47.619 3.71 0.00 0.00 3.95
1933 2004 1.266211 CGCGACAAGTAATTCCGAACG 60.266 52.381 0.00 0.00 0.00 3.95
1934 2005 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
1935 2006 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
1936 2007 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
1937 2008 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
1938 2009 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
1970 2068 7.235079 TCTTAGGGTCTAGATATTGTCTCTGG 58.765 42.308 0.00 0.00 38.42 3.86
2010 2108 4.627058 CCGTAACTTTTGCCCTCAAATTT 58.373 39.130 0.00 0.00 41.37 1.82
2016 2114 3.874873 GCCCTCAAATTTTGGCGC 58.125 55.556 9.18 0.00 33.59 6.53
2018 2116 0.391528 GCCCTCAAATTTTGGCGCAT 60.392 50.000 10.83 0.00 33.59 4.73
2058 2183 0.654160 CGTACTGTGCCATGCAGATG 59.346 55.000 5.90 0.00 40.08 2.90
2187 2325 8.278408 GCTGCTCTTTTCCTTTTAATTTCTTTG 58.722 33.333 0.00 0.00 0.00 2.77
2220 2362 8.928844 ATAAGTGTTGTTTTCGTTTATCTTCG 57.071 30.769 0.00 0.00 0.00 3.79
2229 2371 6.939551 TTTCGTTTATCTTCGTCTACTTGG 57.060 37.500 0.00 0.00 0.00 3.61
2252 2394 4.816925 GGTGCTTGAACTGAGAGTTACTTT 59.183 41.667 0.00 0.00 38.80 2.66
2266 2408 3.057315 AGTTACTTTGTCATGTGCCATGC 60.057 43.478 9.54 6.51 0.00 4.06
2273 2415 0.466739 TCATGTGCCATGCCCATCTC 60.467 55.000 9.54 0.00 0.00 2.75
2298 2440 0.915872 ATCCACAGGATCCACAGGCA 60.916 55.000 15.82 3.23 38.09 4.75
2379 2521 8.257306 ACTAAATTGTGCCTTCTTTTTCTGAAA 58.743 29.630 0.00 0.00 0.00 2.69
2465 2607 3.076621 CAGCTCTGAAGGTGCAATGTTA 58.923 45.455 0.00 0.00 43.49 2.41
2560 2712 5.009631 TGGCTTACACTACAAATGCAGATT 58.990 37.500 0.00 0.00 0.00 2.40
2590 2742 6.790319 TGCTCTATCCACTGGTATAGACATA 58.210 40.000 10.75 0.00 32.59 2.29
2602 2754 4.833380 GGTATAGACATAGACCCTCAAGCA 59.167 45.833 0.00 0.00 37.31 3.91
2605 2757 2.499289 AGACATAGACCCTCAAGCAGTG 59.501 50.000 0.00 0.00 0.00 3.66
2635 2787 1.736126 CGTGAGAACATGCTGCTGAAT 59.264 47.619 0.00 0.00 0.00 2.57
2647 2799 3.117776 TGCTGCTGAATGGTATGGATTCT 60.118 43.478 0.00 0.00 32.04 2.40
2649 2801 3.819337 CTGCTGAATGGTATGGATTCTGG 59.181 47.826 0.00 0.00 32.33 3.86
2833 2988 1.335496 GAGCTGGTCGAGGACATAGTC 59.665 57.143 0.00 0.00 33.68 2.59
3007 3162 7.664731 TCTCGTCTAATATAGGTTCCGAAGATT 59.335 37.037 0.00 0.00 0.00 2.40
3010 3165 7.751348 CGTCTAATATAGGTTCCGAAGATTGAG 59.249 40.741 0.00 0.00 0.00 3.02
3149 3307 8.462016 ACATTGTAAAAGCAGATTGACCTTATC 58.538 33.333 0.00 0.00 0.00 1.75
3307 3466 0.686789 TGCCTAACTGCTGCTTCTGA 59.313 50.000 0.00 0.00 0.00 3.27
3334 3493 0.463654 TGTCACTGACCCAACTGCAC 60.464 55.000 6.72 0.00 0.00 4.57
3338 3497 1.149174 CTGACCCAACTGCACCTGT 59.851 57.895 0.00 0.00 0.00 4.00
3349 3508 0.611200 TGCACCTGTAGTTACGGCAT 59.389 50.000 0.00 0.00 0.00 4.40
3376 3535 5.204292 AGCTCAGTCTTACATCACTATCCA 58.796 41.667 0.00 0.00 0.00 3.41
3498 3660 0.651042 TAACGTTTGTTTCGTGCGCG 60.651 50.000 14.79 14.79 41.38 6.86
3522 3684 6.289901 GTCATTTTTATCACTACGATAGCGC 58.710 40.000 0.00 0.00 42.48 5.92
3540 3702 0.727398 GCGAGGAAATGTGTGGTAGC 59.273 55.000 0.00 0.00 0.00 3.58
3593 3755 5.781818 AGGACAAACCCAGATTGATTTTCAT 59.218 36.000 0.00 0.00 40.05 2.57
3630 3792 8.421249 AAGGGTAAATGAATCAGAAAACATGA 57.579 30.769 0.00 0.00 0.00 3.07
3654 3816 3.838244 TGGTTTCAGACTAACTGCAGT 57.162 42.857 15.25 15.25 45.38 4.40
3656 3818 3.133901 TGGTTTCAGACTAACTGCAGTCA 59.866 43.478 21.95 4.10 46.15 3.41
3659 3821 3.650070 TCAGACTAACTGCAGTCACTG 57.350 47.619 21.95 23.15 46.15 3.66
3664 3826 5.050499 CAGACTAACTGCAGTCACTGAAAAG 60.050 44.000 21.95 5.00 46.15 2.27
3776 3938 7.232534 ACTTCCTGAAGATATGTCCACTATCTC 59.767 40.741 13.58 0.00 40.79 2.75
3777 3939 6.614657 TCCTGAAGATATGTCCACTATCTCA 58.385 40.000 0.00 0.00 35.40 3.27
3856 4018 2.886913 TCAACATGCATCTTTTGGGGA 58.113 42.857 0.00 0.00 0.00 4.81
3877 4041 5.354234 GGGAGAAAAACTCATTCATTAGCGA 59.646 40.000 0.00 0.00 46.54 4.93
3904 4068 3.314635 CCTGGTTAGCAATCTCAATCTGC 59.685 47.826 0.00 0.00 36.29 4.26
3921 4085 2.233676 TCTGCGAGTATGCTTTGAAGGA 59.766 45.455 0.00 0.00 35.36 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.609747 TGAGCTCAGGTGTAGAAAGGT 58.390 47.619 13.74 0.00 0.00 3.50
1 2 3.902881 ATGAGCTCAGGTGTAGAAAGG 57.097 47.619 22.96 0.00 0.00 3.11
2 3 4.808364 GCTTATGAGCTCAGGTGTAGAAAG 59.192 45.833 22.96 14.15 45.65 2.62
3 4 4.759782 GCTTATGAGCTCAGGTGTAGAAA 58.240 43.478 22.96 5.23 45.65 2.52
4 5 4.392921 GCTTATGAGCTCAGGTGTAGAA 57.607 45.455 22.96 6.32 45.65 2.10
24 25 2.010145 TTCGTGTTCATAGCAGGAGC 57.990 50.000 0.00 0.00 42.56 4.70
25 26 6.662414 TTATTTTCGTGTTCATAGCAGGAG 57.338 37.500 0.00 0.00 33.24 3.69
26 27 7.624360 ATTTATTTTCGTGTTCATAGCAGGA 57.376 32.000 0.00 0.00 0.00 3.86
27 28 9.781834 TTTATTTATTTTCGTGTTCATAGCAGG 57.218 29.630 0.00 0.00 0.00 4.85
86 87 9.606631 AACATTTCTTAAAGTATGCCACAAAAA 57.393 25.926 0.00 0.00 0.00 1.94
87 88 9.606631 AAACATTTCTTAAAGTATGCCACAAAA 57.393 25.926 0.00 0.00 0.00 2.44
98 99 8.711457 GCATGCACAATAAACATTTCTTAAAGT 58.289 29.630 14.21 0.00 0.00 2.66
99 100 8.710551 TGCATGCACAATAAACATTTCTTAAAG 58.289 29.630 18.46 0.00 0.00 1.85
100 101 8.599055 TGCATGCACAATAAACATTTCTTAAA 57.401 26.923 18.46 0.00 0.00 1.52
101 102 8.599055 TTGCATGCACAATAAACATTTCTTAA 57.401 26.923 22.58 0.00 0.00 1.85
102 103 8.599055 TTTGCATGCACAATAAACATTTCTTA 57.401 26.923 22.58 0.00 0.00 2.10
103 104 7.493743 TTTGCATGCACAATAAACATTTCTT 57.506 28.000 22.58 0.00 0.00 2.52
104 105 7.493743 TTTTGCATGCACAATAAACATTTCT 57.506 28.000 22.58 0.00 0.00 2.52
105 106 8.730970 AATTTTGCATGCACAATAAACATTTC 57.269 26.923 27.48 0.00 0.00 2.17
106 107 9.182933 GAAATTTTGCATGCACAATAAACATTT 57.817 25.926 27.48 18.97 0.00 2.32
107 108 8.350722 TGAAATTTTGCATGCACAATAAACATT 58.649 25.926 27.48 19.02 0.00 2.71
108 109 7.872881 TGAAATTTTGCATGCACAATAAACAT 58.127 26.923 27.48 12.49 0.00 2.71
109 110 7.255491 TGAAATTTTGCATGCACAATAAACA 57.745 28.000 27.48 22.80 0.00 2.83
110 111 8.730970 AATGAAATTTTGCATGCACAATAAAC 57.269 26.923 27.48 21.05 26.74 2.01
111 112 9.823098 GTAATGAAATTTTGCATGCACAATAAA 57.177 25.926 27.48 21.50 37.87 1.40
112 113 8.167345 CGTAATGAAATTTTGCATGCACAATAA 58.833 29.630 27.48 18.12 37.87 1.40
113 114 7.543520 TCGTAATGAAATTTTGCATGCACAATA 59.456 29.630 27.48 15.64 37.87 1.90
114 115 6.368243 TCGTAATGAAATTTTGCATGCACAAT 59.632 30.769 23.16 23.16 37.87 2.71
115 116 5.693555 TCGTAATGAAATTTTGCATGCACAA 59.306 32.000 22.58 21.53 37.87 3.33
116 117 5.225642 TCGTAATGAAATTTTGCATGCACA 58.774 33.333 22.58 12.14 37.87 4.57
117 118 5.760193 TCGTAATGAAATTTTGCATGCAC 57.240 34.783 22.58 8.45 37.87 4.57
118 119 6.775939 TTTCGTAATGAAATTTTGCATGCA 57.224 29.167 18.46 18.46 41.59 3.96
129 130 6.207614 TCCACCAATGTGATTTCGTAATGAAA 59.792 34.615 0.00 0.00 45.76 2.69
130 131 5.707764 TCCACCAATGTGATTTCGTAATGAA 59.292 36.000 0.00 0.00 45.76 2.57
131 132 5.249420 TCCACCAATGTGATTTCGTAATGA 58.751 37.500 0.00 0.00 45.76 2.57
132 133 5.449041 CCTCCACCAATGTGATTTCGTAATG 60.449 44.000 0.00 0.00 45.76 1.90
133 134 4.640201 CCTCCACCAATGTGATTTCGTAAT 59.360 41.667 0.00 0.00 45.76 1.89
134 135 4.006989 CCTCCACCAATGTGATTTCGTAA 58.993 43.478 0.00 0.00 45.76 3.18
135 136 3.008594 ACCTCCACCAATGTGATTTCGTA 59.991 43.478 0.00 0.00 45.76 3.43
136 137 2.224769 ACCTCCACCAATGTGATTTCGT 60.225 45.455 0.00 0.00 45.76 3.85
137 138 2.420022 GACCTCCACCAATGTGATTTCG 59.580 50.000 0.00 0.00 45.76 3.46
138 139 2.420022 CGACCTCCACCAATGTGATTTC 59.580 50.000 0.00 0.00 45.76 2.17
139 140 2.224769 ACGACCTCCACCAATGTGATTT 60.225 45.455 0.00 0.00 45.76 2.17
140 141 1.351017 ACGACCTCCACCAATGTGATT 59.649 47.619 0.00 0.00 45.76 2.57
141 142 0.984230 ACGACCTCCACCAATGTGAT 59.016 50.000 0.00 0.00 45.76 3.06
142 143 0.320374 GACGACCTCCACCAATGTGA 59.680 55.000 0.00 0.00 45.76 3.58
143 144 1.014044 CGACGACCTCCACCAATGTG 61.014 60.000 0.00 0.00 42.39 3.21
144 145 1.292223 CGACGACCTCCACCAATGT 59.708 57.895 0.00 0.00 0.00 2.71
145 146 2.100631 GCGACGACCTCCACCAATG 61.101 63.158 0.00 0.00 0.00 2.82
146 147 2.107041 TTGCGACGACCTCCACCAAT 62.107 55.000 0.00 0.00 0.00 3.16
147 148 2.313051 TTTGCGACGACCTCCACCAA 62.313 55.000 0.00 0.00 0.00 3.67
148 149 2.313051 TTTTGCGACGACCTCCACCA 62.313 55.000 0.00 0.00 0.00 4.17
149 150 1.161563 TTTTTGCGACGACCTCCACC 61.162 55.000 0.00 0.00 0.00 4.61
150 151 2.313267 TTTTTGCGACGACCTCCAC 58.687 52.632 0.00 0.00 0.00 4.02
151 152 4.859400 TTTTTGCGACGACCTCCA 57.141 50.000 0.00 0.00 0.00 3.86
169 170 4.240096 CGCATTTTGGAGCTCTGATTTTT 58.760 39.130 14.64 0.00 0.00 1.94
170 171 3.256631 ACGCATTTTGGAGCTCTGATTTT 59.743 39.130 14.64 0.00 0.00 1.82
171 172 2.821969 ACGCATTTTGGAGCTCTGATTT 59.178 40.909 14.64 0.00 0.00 2.17
172 173 2.440409 ACGCATTTTGGAGCTCTGATT 58.560 42.857 14.64 0.00 0.00 2.57
173 174 2.119801 ACGCATTTTGGAGCTCTGAT 57.880 45.000 14.64 0.00 0.00 2.90
174 175 1.896220 AACGCATTTTGGAGCTCTGA 58.104 45.000 14.64 0.00 0.00 3.27
175 176 2.030893 TCAAACGCATTTTGGAGCTCTG 60.031 45.455 14.64 4.50 44.30 3.35
176 177 2.229792 TCAAACGCATTTTGGAGCTCT 58.770 42.857 14.64 0.00 44.30 4.09
177 178 2.704725 TCAAACGCATTTTGGAGCTC 57.295 45.000 4.71 4.71 44.30 4.09
178 179 3.181476 ACTTTCAAACGCATTTTGGAGCT 60.181 39.130 7.70 0.00 44.30 4.09
179 180 3.123050 ACTTTCAAACGCATTTTGGAGC 58.877 40.909 7.70 0.00 44.30 4.70
180 181 5.746245 TGTTACTTTCAAACGCATTTTGGAG 59.254 36.000 7.70 8.42 44.30 3.86
181 182 5.651530 TGTTACTTTCAAACGCATTTTGGA 58.348 33.333 7.70 0.00 44.30 3.53
182 183 5.957910 TGTTACTTTCAAACGCATTTTGG 57.042 34.783 7.70 0.00 44.30 3.28
183 184 8.819152 AAAATGTTACTTTCAAACGCATTTTG 57.181 26.923 10.31 2.03 45.38 2.44
184 185 8.660373 TGAAAATGTTACTTTCAAACGCATTTT 58.340 25.926 10.74 10.74 43.33 1.82
185 186 8.190888 TGAAAATGTTACTTTCAAACGCATTT 57.809 26.923 0.00 0.00 39.28 2.32
186 187 7.704472 TCTGAAAATGTTACTTTCAAACGCATT 59.296 29.630 2.32 0.00 41.10 3.56
187 188 7.199766 TCTGAAAATGTTACTTTCAAACGCAT 58.800 30.769 2.32 0.00 41.10 4.73
188 189 6.556212 TCTGAAAATGTTACTTTCAAACGCA 58.444 32.000 2.32 0.00 41.10 5.24
189 190 6.691388 ACTCTGAAAATGTTACTTTCAAACGC 59.309 34.615 2.32 0.00 41.10 4.84
190 191 9.878599 ATACTCTGAAAATGTTACTTTCAAACG 57.121 29.630 2.32 0.00 41.10 3.60
227 228 2.964209 TGGTGGAAGGCATGGTAAAAA 58.036 42.857 0.00 0.00 0.00 1.94
228 229 2.685106 TGGTGGAAGGCATGGTAAAA 57.315 45.000 0.00 0.00 0.00 1.52
229 230 2.685106 TTGGTGGAAGGCATGGTAAA 57.315 45.000 0.00 0.00 0.00 2.01
230 231 2.225242 ACATTGGTGGAAGGCATGGTAA 60.225 45.455 0.00 0.00 0.00 2.85
231 232 1.357420 ACATTGGTGGAAGGCATGGTA 59.643 47.619 0.00 0.00 0.00 3.25
232 233 0.114954 ACATTGGTGGAAGGCATGGT 59.885 50.000 0.00 0.00 0.00 3.55
233 234 0.819582 GACATTGGTGGAAGGCATGG 59.180 55.000 0.00 0.00 0.00 3.66
234 235 1.548081 TGACATTGGTGGAAGGCATG 58.452 50.000 0.00 0.00 0.00 4.06
235 236 2.537633 ATGACATTGGTGGAAGGCAT 57.462 45.000 0.00 0.00 0.00 4.40
236 237 2.307496 AATGACATTGGTGGAAGGCA 57.693 45.000 0.00 0.00 0.00 4.75
237 238 2.562298 TGAAATGACATTGGTGGAAGGC 59.438 45.455 0.34 0.00 0.00 4.35
255 256 5.701290 TGTGCATGCAAAATTTCATCATGAA 59.299 32.000 24.58 13.74 37.34 2.57
256 257 5.238583 TGTGCATGCAAAATTTCATCATGA 58.761 33.333 24.58 0.00 37.34 3.07
257 258 5.538067 TGTGCATGCAAAATTTCATCATG 57.462 34.783 24.58 16.52 37.98 3.07
258 259 5.470437 TGTTGTGCATGCAAAATTTCATCAT 59.530 32.000 25.58 0.00 0.00 2.45
259 260 4.814771 TGTTGTGCATGCAAAATTTCATCA 59.185 33.333 25.58 17.41 0.00 3.07
260 261 5.345609 TGTTGTGCATGCAAAATTTCATC 57.654 34.783 25.58 15.25 0.00 2.92
261 262 5.752892 TTGTTGTGCATGCAAAATTTCAT 57.247 30.435 25.58 0.00 0.00 2.57
262 263 5.106436 TGTTTGTTGTGCATGCAAAATTTCA 60.106 32.000 25.58 16.21 34.47 2.69
263 264 5.330295 TGTTTGTTGTGCATGCAAAATTTC 58.670 33.333 25.58 13.82 34.47 2.17
264 265 5.306532 TGTTTGTTGTGCATGCAAAATTT 57.693 30.435 25.58 0.00 34.47 1.82
265 266 4.959596 TGTTTGTTGTGCATGCAAAATT 57.040 31.818 25.58 0.00 34.47 1.82
266 267 5.502153 AATGTTTGTTGTGCATGCAAAAT 57.498 30.435 25.58 6.44 34.47 1.82
267 268 4.959596 AATGTTTGTTGTGCATGCAAAA 57.040 31.818 24.58 21.90 34.47 2.44
268 269 4.634883 AGAAATGTTTGTTGTGCATGCAAA 59.365 33.333 24.58 15.92 0.00 3.68
269 270 4.190001 AGAAATGTTTGTTGTGCATGCAA 58.810 34.783 24.58 10.26 0.00 4.08
270 271 3.794717 AGAAATGTTTGTTGTGCATGCA 58.205 36.364 18.46 18.46 0.00 3.96
271 272 4.799419 AAGAAATGTTTGTTGTGCATGC 57.201 36.364 11.82 11.82 0.00 4.06
272 273 7.908230 ACTTTAAGAAATGTTTGTTGTGCATG 58.092 30.769 0.00 0.00 0.00 4.06
273 274 9.762933 ATACTTTAAGAAATGTTTGTTGTGCAT 57.237 25.926 0.00 0.00 0.00 3.96
274 275 9.029243 CATACTTTAAGAAATGTTTGTTGTGCA 57.971 29.630 0.00 0.00 0.00 4.57
275 276 8.003784 GCATACTTTAAGAAATGTTTGTTGTGC 58.996 33.333 0.00 0.00 29.91 4.57
276 277 8.487176 GGCATACTTTAAGAAATGTTTGTTGTG 58.513 33.333 0.00 0.00 29.91 3.33
277 278 8.200792 TGGCATACTTTAAGAAATGTTTGTTGT 58.799 29.630 0.00 0.00 29.91 3.32
278 279 8.487176 GTGGCATACTTTAAGAAATGTTTGTTG 58.513 33.333 0.00 0.00 29.91 3.33
279 280 7.381139 CGTGGCATACTTTAAGAAATGTTTGTT 59.619 33.333 0.00 0.00 29.91 2.83
280 281 6.861055 CGTGGCATACTTTAAGAAATGTTTGT 59.139 34.615 0.00 0.00 29.91 2.83
281 282 6.861055 ACGTGGCATACTTTAAGAAATGTTTG 59.139 34.615 0.00 0.00 0.00 2.93
282 283 6.977213 ACGTGGCATACTTTAAGAAATGTTT 58.023 32.000 0.00 0.00 0.00 2.83
283 284 6.349033 GGACGTGGCATACTTTAAGAAATGTT 60.349 38.462 0.00 0.00 0.00 2.71
284 285 5.123344 GGACGTGGCATACTTTAAGAAATGT 59.877 40.000 0.00 0.00 0.00 2.71
285 286 5.123186 TGGACGTGGCATACTTTAAGAAATG 59.877 40.000 0.00 3.58 0.00 2.32
286 287 5.250200 TGGACGTGGCATACTTTAAGAAAT 58.750 37.500 0.00 0.00 0.00 2.17
287 288 4.643463 TGGACGTGGCATACTTTAAGAAA 58.357 39.130 0.00 0.00 0.00 2.52
288 289 4.274602 TGGACGTGGCATACTTTAAGAA 57.725 40.909 0.00 0.00 0.00 2.52
289 290 3.965379 TGGACGTGGCATACTTTAAGA 57.035 42.857 0.00 0.00 0.00 2.10
290 291 5.123186 TCAAATGGACGTGGCATACTTTAAG 59.877 40.000 0.00 0.00 0.00 1.85
291 292 5.004448 TCAAATGGACGTGGCATACTTTAA 58.996 37.500 0.00 0.00 0.00 1.52
292 293 4.580868 TCAAATGGACGTGGCATACTTTA 58.419 39.130 0.00 0.00 0.00 1.85
293 294 3.417101 TCAAATGGACGTGGCATACTTT 58.583 40.909 0.00 0.00 0.00 2.66
294 295 3.066291 TCAAATGGACGTGGCATACTT 57.934 42.857 0.00 0.00 0.00 2.24
295 296 2.779755 TCAAATGGACGTGGCATACT 57.220 45.000 0.00 0.00 0.00 2.12
296 297 3.190535 ACTTTCAAATGGACGTGGCATAC 59.809 43.478 0.00 0.00 0.00 2.39
297 298 3.417101 ACTTTCAAATGGACGTGGCATA 58.583 40.909 0.00 0.00 0.00 3.14
298 299 2.238521 ACTTTCAAATGGACGTGGCAT 58.761 42.857 0.00 0.00 0.00 4.40
299 300 1.686355 ACTTTCAAATGGACGTGGCA 58.314 45.000 0.00 0.00 0.00 4.92
300 301 3.003897 TGTTACTTTCAAATGGACGTGGC 59.996 43.478 0.00 0.00 0.00 5.01
301 302 4.822036 TGTTACTTTCAAATGGACGTGG 57.178 40.909 0.00 0.00 0.00 4.94
302 303 6.695278 ACAATTGTTACTTTCAAATGGACGTG 59.305 34.615 4.92 0.00 32.15 4.49
303 304 6.801575 ACAATTGTTACTTTCAAATGGACGT 58.198 32.000 4.92 0.00 32.15 4.34
304 305 7.692908 AACAATTGTTACTTTCAAATGGACG 57.307 32.000 22.10 0.00 36.32 4.79
339 340 8.624776 GCTCCTGCTATGAACAGTAAAATAAAT 58.375 33.333 0.00 0.00 36.03 1.40
340 341 7.609918 TGCTCCTGCTATGAACAGTAAAATAAA 59.390 33.333 0.00 0.00 40.48 1.40
341 342 7.109501 TGCTCCTGCTATGAACAGTAAAATAA 58.890 34.615 0.00 0.00 40.48 1.40
342 343 6.649155 TGCTCCTGCTATGAACAGTAAAATA 58.351 36.000 0.00 0.00 40.48 1.40
343 344 5.500234 TGCTCCTGCTATGAACAGTAAAAT 58.500 37.500 0.00 0.00 40.48 1.82
344 345 4.905429 TGCTCCTGCTATGAACAGTAAAA 58.095 39.130 0.00 0.00 40.48 1.52
345 346 4.551702 TGCTCCTGCTATGAACAGTAAA 57.448 40.909 0.00 0.00 40.48 2.01
346 347 4.760530 ATGCTCCTGCTATGAACAGTAA 57.239 40.909 0.00 0.00 40.48 2.24
347 348 5.539955 TCATATGCTCCTGCTATGAACAGTA 59.460 40.000 0.00 0.00 36.90 2.74
348 349 4.346127 TCATATGCTCCTGCTATGAACAGT 59.654 41.667 0.00 0.00 36.90 3.55
349 350 4.891260 TCATATGCTCCTGCTATGAACAG 58.109 43.478 0.00 0.00 36.90 3.16
350 351 4.801914 GCTCATATGCTCCTGCTATGAACA 60.802 45.833 0.00 0.00 38.05 3.18
351 352 3.683822 GCTCATATGCTCCTGCTATGAAC 59.316 47.826 0.00 0.00 38.05 3.18
352 353 3.581770 AGCTCATATGCTCCTGCTATGAA 59.418 43.478 0.00 0.00 39.34 2.57
353 354 3.171528 AGCTCATATGCTCCTGCTATGA 58.828 45.455 0.00 0.00 39.34 2.15
354 355 3.613494 AGCTCATATGCTCCTGCTATG 57.387 47.619 0.00 0.00 39.34 2.23
364 365 6.696411 AGTTTCTATACCTGAGCTCATATGC 58.304 40.000 18.63 3.91 0.00 3.14
365 366 7.039434 TGGAGTTTCTATACCTGAGCTCATATG 60.039 40.741 18.63 11.44 0.00 1.78
366 367 7.013220 TGGAGTTTCTATACCTGAGCTCATAT 58.987 38.462 18.63 15.29 0.00 1.78
367 368 6.265649 GTGGAGTTTCTATACCTGAGCTCATA 59.734 42.308 18.63 8.29 0.00 2.15
368 369 5.069781 GTGGAGTTTCTATACCTGAGCTCAT 59.930 44.000 18.63 5.89 0.00 2.90
369 370 4.402793 GTGGAGTTTCTATACCTGAGCTCA 59.597 45.833 17.19 17.19 0.00 4.26
370 371 4.498345 CGTGGAGTTTCTATACCTGAGCTC 60.498 50.000 6.82 6.82 0.00 4.09
371 372 3.381908 CGTGGAGTTTCTATACCTGAGCT 59.618 47.826 0.00 0.00 0.00 4.09
372 373 3.130693 ACGTGGAGTTTCTATACCTGAGC 59.869 47.826 0.00 0.00 0.00 4.26
373 374 4.202030 GGACGTGGAGTTTCTATACCTGAG 60.202 50.000 0.00 0.00 0.00 3.35
374 375 3.698040 GGACGTGGAGTTTCTATACCTGA 59.302 47.826 0.00 0.00 0.00 3.86
375 376 3.488721 CGGACGTGGAGTTTCTATACCTG 60.489 52.174 0.00 0.00 0.00 4.00
376 377 2.686915 CGGACGTGGAGTTTCTATACCT 59.313 50.000 0.00 0.00 0.00 3.08
377 378 2.223665 CCGGACGTGGAGTTTCTATACC 60.224 54.545 0.00 0.00 0.00 2.73
378 379 2.424956 ACCGGACGTGGAGTTTCTATAC 59.575 50.000 9.46 0.00 0.00 1.47
379 380 2.424601 CACCGGACGTGGAGTTTCTATA 59.575 50.000 9.46 0.00 38.96 1.31
380 381 1.203994 CACCGGACGTGGAGTTTCTAT 59.796 52.381 9.46 0.00 38.96 1.98
381 382 0.599558 CACCGGACGTGGAGTTTCTA 59.400 55.000 9.46 0.00 38.96 2.10
382 383 1.111116 TCACCGGACGTGGAGTTTCT 61.111 55.000 9.46 0.00 43.23 2.52
383 384 0.249573 TTCACCGGACGTGGAGTTTC 60.250 55.000 9.46 0.00 43.23 2.78
384 385 0.249741 CTTCACCGGACGTGGAGTTT 60.250 55.000 9.46 0.00 42.52 2.66
385 386 1.366366 CTTCACCGGACGTGGAGTT 59.634 57.895 9.46 0.00 42.52 3.01
386 387 2.571216 CCTTCACCGGACGTGGAGT 61.571 63.158 9.46 0.00 45.65 3.85
387 388 2.261671 CCTTCACCGGACGTGGAG 59.738 66.667 9.46 0.00 46.55 3.86
388 389 3.307906 CCCTTCACCGGACGTGGA 61.308 66.667 9.46 0.00 43.23 4.02
390 391 4.308458 TGCCCTTCACCGGACGTG 62.308 66.667 9.46 0.00 44.50 4.49
391 392 4.309950 GTGCCCTTCACCGGACGT 62.310 66.667 9.46 0.00 39.79 4.34
392 393 3.530910 AAGTGCCCTTCACCGGACG 62.531 63.158 9.46 0.00 46.81 4.79
393 394 1.228154 AAAGTGCCCTTCACCGGAC 60.228 57.895 9.46 0.00 46.81 4.79
394 395 1.072505 GAAAGTGCCCTTCACCGGA 59.927 57.895 9.46 0.00 46.81 5.14
395 396 0.537371 AAGAAAGTGCCCTTCACCGG 60.537 55.000 0.00 0.00 46.81 5.28
396 397 1.318576 AAAGAAAGTGCCCTTCACCG 58.681 50.000 0.00 0.00 46.81 4.94
397 398 2.693074 TCAAAAGAAAGTGCCCTTCACC 59.307 45.455 0.00 0.00 46.81 4.02
398 399 4.550422 GATCAAAAGAAAGTGCCCTTCAC 58.450 43.478 0.00 0.00 45.98 3.18
399 400 3.573967 GGATCAAAAGAAAGTGCCCTTCA 59.426 43.478 0.00 0.00 0.00 3.02
400 401 3.056536 GGGATCAAAAGAAAGTGCCCTTC 60.057 47.826 0.00 0.00 0.00 3.46
401 402 2.899900 GGGATCAAAAGAAAGTGCCCTT 59.100 45.455 0.00 0.00 0.00 3.95
402 403 2.158325 TGGGATCAAAAGAAAGTGCCCT 60.158 45.455 0.00 0.00 35.36 5.19
403 404 2.232208 CTGGGATCAAAAGAAAGTGCCC 59.768 50.000 0.00 0.00 34.90 5.36
404 405 2.893489 ACTGGGATCAAAAGAAAGTGCC 59.107 45.455 0.00 0.00 0.00 5.01
405 406 4.590850 AACTGGGATCAAAAGAAAGTGC 57.409 40.909 0.00 0.00 0.00 4.40
406 407 6.147864 TGAAACTGGGATCAAAAGAAAGTG 57.852 37.500 0.00 0.00 0.00 3.16
407 408 6.983906 ATGAAACTGGGATCAAAAGAAAGT 57.016 33.333 0.00 0.00 0.00 2.66
408 409 8.115490 ACTATGAAACTGGGATCAAAAGAAAG 57.885 34.615 0.00 0.00 0.00 2.62
409 410 7.723616 TGACTATGAAACTGGGATCAAAAGAAA 59.276 33.333 0.00 0.00 0.00 2.52
410 411 7.230747 TGACTATGAAACTGGGATCAAAAGAA 58.769 34.615 0.00 0.00 0.00 2.52
411 412 6.778821 TGACTATGAAACTGGGATCAAAAGA 58.221 36.000 0.00 0.00 0.00 2.52
412 413 7.636150 ATGACTATGAAACTGGGATCAAAAG 57.364 36.000 0.00 0.00 0.00 2.27
413 414 8.421249 AAATGACTATGAAACTGGGATCAAAA 57.579 30.769 0.00 0.00 0.00 2.44
414 415 8.421249 AAAATGACTATGAAACTGGGATCAAA 57.579 30.769 0.00 0.00 0.00 2.69
415 416 8.421249 AAAAATGACTATGAAACTGGGATCAA 57.579 30.769 0.00 0.00 0.00 2.57
450 451 3.406512 AGGAATGGAGGCAGTAGTACT 57.593 47.619 0.00 0.00 0.00 2.73
451 452 5.609533 TTTAGGAATGGAGGCAGTAGTAC 57.390 43.478 0.00 0.00 0.00 2.73
452 453 5.130477 CCTTTTAGGAATGGAGGCAGTAGTA 59.870 44.000 0.00 0.00 37.67 1.82
453 454 4.080299 CCTTTTAGGAATGGAGGCAGTAGT 60.080 45.833 0.00 0.00 37.67 2.73
454 455 4.455606 CCTTTTAGGAATGGAGGCAGTAG 58.544 47.826 0.00 0.00 37.67 2.57
455 456 3.202151 CCCTTTTAGGAATGGAGGCAGTA 59.798 47.826 0.00 0.00 37.67 2.74
456 457 2.024941 CCCTTTTAGGAATGGAGGCAGT 60.025 50.000 0.00 0.00 37.67 4.40
457 458 2.659428 CCCTTTTAGGAATGGAGGCAG 58.341 52.381 0.00 0.00 37.67 4.85
458 459 1.287739 CCCCTTTTAGGAATGGAGGCA 59.712 52.381 0.00 0.00 37.67 4.75
459 460 1.288037 ACCCCTTTTAGGAATGGAGGC 59.712 52.381 0.00 0.00 37.67 4.70
460 461 4.045022 TCTACCCCTTTTAGGAATGGAGG 58.955 47.826 0.00 0.00 37.67 4.30
461 462 4.722279 AGTCTACCCCTTTTAGGAATGGAG 59.278 45.833 0.00 0.00 37.67 3.86
462 463 4.706616 AGTCTACCCCTTTTAGGAATGGA 58.293 43.478 0.00 0.00 37.67 3.41
463 464 6.570654 TTAGTCTACCCCTTTTAGGAATGG 57.429 41.667 0.00 0.00 37.67 3.16
467 468 9.964354 GTTTAAATTAGTCTACCCCTTTTAGGA 57.036 33.333 0.00 0.00 37.67 2.94
468 469 9.970553 AGTTTAAATTAGTCTACCCCTTTTAGG 57.029 33.333 0.00 0.00 34.30 2.69
470 471 9.234827 GCAGTTTAAATTAGTCTACCCCTTTTA 57.765 33.333 0.00 0.00 0.00 1.52
471 472 7.726738 TGCAGTTTAAATTAGTCTACCCCTTTT 59.273 33.333 0.00 0.00 0.00 2.27
472 473 7.235804 TGCAGTTTAAATTAGTCTACCCCTTT 58.764 34.615 0.00 0.00 0.00 3.11
473 474 6.786122 TGCAGTTTAAATTAGTCTACCCCTT 58.214 36.000 0.00 0.00 0.00 3.95
474 475 6.382919 TGCAGTTTAAATTAGTCTACCCCT 57.617 37.500 0.00 0.00 0.00 4.79
475 476 6.826741 TGATGCAGTTTAAATTAGTCTACCCC 59.173 38.462 0.00 0.00 0.00 4.95
476 477 7.859325 TGATGCAGTTTAAATTAGTCTACCC 57.141 36.000 0.00 0.00 0.00 3.69
477 478 7.903431 CGTTGATGCAGTTTAAATTAGTCTACC 59.097 37.037 0.00 0.00 0.00 3.18
478 479 8.440833 ACGTTGATGCAGTTTAAATTAGTCTAC 58.559 33.333 0.00 0.00 0.00 2.59
479 480 8.542497 ACGTTGATGCAGTTTAAATTAGTCTA 57.458 30.769 0.00 0.00 0.00 2.59
480 481 7.387948 AGACGTTGATGCAGTTTAAATTAGTCT 59.612 33.333 0.00 0.00 0.00 3.24
481 482 7.519002 AGACGTTGATGCAGTTTAAATTAGTC 58.481 34.615 0.00 0.00 0.00 2.59
482 483 7.435068 AGACGTTGATGCAGTTTAAATTAGT 57.565 32.000 0.00 0.00 0.00 2.24
483 484 9.988350 ATAAGACGTTGATGCAGTTTAAATTAG 57.012 29.630 0.00 0.00 0.00 1.73
485 486 9.988350 CTATAAGACGTTGATGCAGTTTAAATT 57.012 29.630 0.00 0.00 0.00 1.82
486 487 9.162764 ACTATAAGACGTTGATGCAGTTTAAAT 57.837 29.630 0.00 0.00 0.00 1.40
487 488 8.542497 ACTATAAGACGTTGATGCAGTTTAAA 57.458 30.769 0.00 0.00 0.00 1.52
488 489 8.542497 AACTATAAGACGTTGATGCAGTTTAA 57.458 30.769 0.00 0.00 0.00 1.52
489 490 9.297586 CTAACTATAAGACGTTGATGCAGTTTA 57.702 33.333 0.00 0.00 0.00 2.01
490 491 7.277981 CCTAACTATAAGACGTTGATGCAGTTT 59.722 37.037 0.00 0.00 0.00 2.66
491 492 6.757010 CCTAACTATAAGACGTTGATGCAGTT 59.243 38.462 0.00 0.00 0.00 3.16
492 493 6.096423 TCCTAACTATAAGACGTTGATGCAGT 59.904 38.462 0.00 0.00 0.00 4.40
493 494 6.504398 TCCTAACTATAAGACGTTGATGCAG 58.496 40.000 0.00 0.00 0.00 4.41
494 495 6.459670 TCCTAACTATAAGACGTTGATGCA 57.540 37.500 0.00 0.00 0.00 3.96
495 496 7.652105 TCATTCCTAACTATAAGACGTTGATGC 59.348 37.037 0.00 0.00 0.00 3.91
496 497 9.529325 TTCATTCCTAACTATAAGACGTTGATG 57.471 33.333 0.00 0.00 0.00 3.07
497 498 9.751542 CTTCATTCCTAACTATAAGACGTTGAT 57.248 33.333 0.00 0.00 0.00 2.57
498 499 8.195436 CCTTCATTCCTAACTATAAGACGTTGA 58.805 37.037 0.00 0.00 0.00 3.18
499 500 7.980099 ACCTTCATTCCTAACTATAAGACGTTG 59.020 37.037 0.00 0.00 0.00 4.10
500 501 8.075761 ACCTTCATTCCTAACTATAAGACGTT 57.924 34.615 0.00 0.00 0.00 3.99
501 502 7.657023 ACCTTCATTCCTAACTATAAGACGT 57.343 36.000 0.00 0.00 0.00 4.34
536 537 9.783081 TGAGATACTCGTATAATACCAGTAACA 57.217 33.333 0.00 0.00 36.29 2.41
538 539 9.783081 TGTGAGATACTCGTATAATACCAGTAA 57.217 33.333 0.00 0.00 36.29 2.24
539 540 9.783081 TTGTGAGATACTCGTATAATACCAGTA 57.217 33.333 0.00 0.00 36.93 2.74
540 541 8.687292 TTGTGAGATACTCGTATAATACCAGT 57.313 34.615 0.00 0.00 34.50 4.00
541 542 8.784994 ACTTGTGAGATACTCGTATAATACCAG 58.215 37.037 0.00 0.00 32.35 4.00
542 543 8.687292 ACTTGTGAGATACTCGTATAATACCA 57.313 34.615 0.00 0.00 32.35 3.25
543 544 9.609950 GAACTTGTGAGATACTCGTATAATACC 57.390 37.037 0.00 0.00 32.35 2.73
571 572 9.342308 CTGAGAGTATATTATGCCCAAGAAAAA 57.658 33.333 0.00 0.00 0.00 1.94
572 573 8.494433 ACTGAGAGTATATTATGCCCAAGAAAA 58.506 33.333 0.00 0.00 0.00 2.29
573 574 8.034313 ACTGAGAGTATATTATGCCCAAGAAA 57.966 34.615 0.00 0.00 0.00 2.52
574 575 7.510685 AGACTGAGAGTATATTATGCCCAAGAA 59.489 37.037 0.00 0.00 0.00 2.52
575 576 7.013220 AGACTGAGAGTATATTATGCCCAAGA 58.987 38.462 0.00 0.00 0.00 3.02
576 577 7.039434 TGAGACTGAGAGTATATTATGCCCAAG 60.039 40.741 0.00 0.00 0.00 3.61
577 578 6.782494 TGAGACTGAGAGTATATTATGCCCAA 59.218 38.462 0.00 0.00 0.00 4.12
578 579 6.314917 TGAGACTGAGAGTATATTATGCCCA 58.685 40.000 0.00 0.00 0.00 5.36
579 580 6.842437 TGAGACTGAGAGTATATTATGCCC 57.158 41.667 0.00 0.00 0.00 5.36
580 581 9.717942 ATTTTGAGACTGAGAGTATATTATGCC 57.282 33.333 0.00 0.00 0.00 4.40
588 589 7.971168 CGACACTTATTTTGAGACTGAGAGTAT 59.029 37.037 0.00 0.00 0.00 2.12
589 590 7.306213 CGACACTTATTTTGAGACTGAGAGTA 58.694 38.462 0.00 0.00 0.00 2.59
590 591 6.153067 CGACACTTATTTTGAGACTGAGAGT 58.847 40.000 0.00 0.00 0.00 3.24
591 592 5.061560 GCGACACTTATTTTGAGACTGAGAG 59.938 44.000 0.00 0.00 0.00 3.20
592 593 4.923871 GCGACACTTATTTTGAGACTGAGA 59.076 41.667 0.00 0.00 0.00 3.27
593 594 4.926238 AGCGACACTTATTTTGAGACTGAG 59.074 41.667 0.00 0.00 0.00 3.35
594 595 4.686091 CAGCGACACTTATTTTGAGACTGA 59.314 41.667 0.00 0.00 0.00 3.41
595 596 4.686091 TCAGCGACACTTATTTTGAGACTG 59.314 41.667 0.00 0.00 0.00 3.51
596 597 4.883083 TCAGCGACACTTATTTTGAGACT 58.117 39.130 0.00 0.00 0.00 3.24
597 598 5.786401 ATCAGCGACACTTATTTTGAGAC 57.214 39.130 0.00 0.00 0.00 3.36
598 599 6.801539 AAATCAGCGACACTTATTTTGAGA 57.198 33.333 0.00 0.00 29.68 3.27
599 600 7.743104 ACTAAATCAGCGACACTTATTTTGAG 58.257 34.615 0.00 0.00 34.69 3.02
600 601 7.667043 ACTAAATCAGCGACACTTATTTTGA 57.333 32.000 0.00 0.00 34.69 2.69
628 629 8.462016 GCAACCTTGTGAGATACTTTCATAAAT 58.538 33.333 0.00 0.00 0.00 1.40
629 630 7.665559 AGCAACCTTGTGAGATACTTTCATAAA 59.334 33.333 0.00 0.00 0.00 1.40
630 631 7.168219 AGCAACCTTGTGAGATACTTTCATAA 58.832 34.615 0.00 0.00 0.00 1.90
631 632 6.711277 AGCAACCTTGTGAGATACTTTCATA 58.289 36.000 0.00 0.00 0.00 2.15
632 633 5.564550 AGCAACCTTGTGAGATACTTTCAT 58.435 37.500 0.00 0.00 0.00 2.57
633 634 4.973168 AGCAACCTTGTGAGATACTTTCA 58.027 39.130 0.00 0.00 0.00 2.69
634 635 5.948992 AAGCAACCTTGTGAGATACTTTC 57.051 39.130 0.00 0.00 0.00 2.62
635 636 6.769512 TCTAAGCAACCTTGTGAGATACTTT 58.230 36.000 0.00 0.00 32.47 2.66
636 637 6.360370 TCTAAGCAACCTTGTGAGATACTT 57.640 37.500 0.00 0.00 32.47 2.24
637 638 6.552445 ATCTAAGCAACCTTGTGAGATACT 57.448 37.500 0.00 0.00 32.47 2.12
638 639 7.764443 TGTTATCTAAGCAACCTTGTGAGATAC 59.236 37.037 0.00 0.00 31.38 2.24
639 640 7.847096 TGTTATCTAAGCAACCTTGTGAGATA 58.153 34.615 0.00 0.00 32.47 1.98
640 641 6.711277 TGTTATCTAAGCAACCTTGTGAGAT 58.289 36.000 0.00 0.00 32.47 2.75
641 642 6.109156 TGTTATCTAAGCAACCTTGTGAGA 57.891 37.500 0.00 0.00 32.47 3.27
642 643 5.352569 CCTGTTATCTAAGCAACCTTGTGAG 59.647 44.000 0.00 0.00 32.47 3.51
643 644 5.245531 CCTGTTATCTAAGCAACCTTGTGA 58.754 41.667 0.00 0.00 32.47 3.58
644 645 4.396166 CCCTGTTATCTAAGCAACCTTGTG 59.604 45.833 0.00 0.00 32.47 3.33
645 646 4.042934 ACCCTGTTATCTAAGCAACCTTGT 59.957 41.667 0.00 0.00 32.47 3.16
646 647 4.589908 ACCCTGTTATCTAAGCAACCTTG 58.410 43.478 0.00 0.00 32.47 3.61
647 648 4.929146 ACCCTGTTATCTAAGCAACCTT 57.071 40.909 0.00 0.00 35.05 3.50
648 649 4.929146 AACCCTGTTATCTAAGCAACCT 57.071 40.909 0.00 0.00 0.00 3.50
649 650 5.007682 TGAAACCCTGTTATCTAAGCAACC 58.992 41.667 0.00 0.00 0.00 3.77
650 651 6.759497 ATGAAACCCTGTTATCTAAGCAAC 57.241 37.500 0.00 0.00 0.00 4.17
651 652 8.871629 TTTATGAAACCCTGTTATCTAAGCAA 57.128 30.769 0.00 0.00 0.00 3.91
652 653 9.120538 GATTTATGAAACCCTGTTATCTAAGCA 57.879 33.333 0.00 0.00 0.00 3.91
653 654 8.568794 GGATTTATGAAACCCTGTTATCTAAGC 58.431 37.037 0.00 0.00 0.00 3.09
654 655 9.627123 TGGATTTATGAAACCCTGTTATCTAAG 57.373 33.333 0.00 0.00 0.00 2.18
655 656 9.403583 GTGGATTTATGAAACCCTGTTATCTAA 57.596 33.333 0.00 0.00 0.00 2.10
656 657 8.553153 TGTGGATTTATGAAACCCTGTTATCTA 58.447 33.333 0.00 0.00 0.00 1.98
657 658 7.410174 TGTGGATTTATGAAACCCTGTTATCT 58.590 34.615 0.00 0.00 0.00 1.98
658 659 7.639113 TGTGGATTTATGAAACCCTGTTATC 57.361 36.000 0.00 0.00 0.00 1.75
659 660 8.477256 CAATGTGGATTTATGAAACCCTGTTAT 58.523 33.333 0.00 0.00 0.00 1.89
660 661 7.453126 ACAATGTGGATTTATGAAACCCTGTTA 59.547 33.333 0.00 0.00 0.00 2.41
661 662 6.269769 ACAATGTGGATTTATGAAACCCTGTT 59.730 34.615 0.00 0.00 0.00 3.16
662 663 5.779771 ACAATGTGGATTTATGAAACCCTGT 59.220 36.000 0.00 0.00 0.00 4.00
663 664 6.284891 ACAATGTGGATTTATGAAACCCTG 57.715 37.500 0.00 0.00 0.00 4.45
664 665 6.933514 AACAATGTGGATTTATGAAACCCT 57.066 33.333 0.00 0.00 0.00 4.34
665 666 9.313118 GAATAACAATGTGGATTTATGAAACCC 57.687 33.333 0.00 0.00 0.00 4.11
699 700 9.482627 AGAAAAACAATGCCGAAATGTAAATAA 57.517 25.926 0.00 0.00 0.00 1.40
700 701 9.482627 AAGAAAAACAATGCCGAAATGTAAATA 57.517 25.926 0.00 0.00 0.00 1.40
701 702 7.961325 AGAAAAACAATGCCGAAATGTAAAT 57.039 28.000 0.00 0.00 0.00 1.40
702 703 7.625553 CAAGAAAAACAATGCCGAAATGTAAA 58.374 30.769 0.00 0.00 0.00 2.01
703 704 6.292596 GCAAGAAAAACAATGCCGAAATGTAA 60.293 34.615 0.00 0.00 32.73 2.41
704 705 5.176590 GCAAGAAAAACAATGCCGAAATGTA 59.823 36.000 0.00 0.00 32.73 2.29
705 706 4.024977 GCAAGAAAAACAATGCCGAAATGT 60.025 37.500 0.00 0.00 32.73 2.71
706 707 4.211794 AGCAAGAAAAACAATGCCGAAATG 59.788 37.500 0.00 0.00 39.59 2.32
707 708 4.379652 AGCAAGAAAAACAATGCCGAAAT 58.620 34.783 0.00 0.00 39.59 2.17
708 709 3.791245 AGCAAGAAAAACAATGCCGAAA 58.209 36.364 0.00 0.00 39.59 3.46
709 710 3.451141 AGCAAGAAAAACAATGCCGAA 57.549 38.095 0.00 0.00 39.59 4.30
721 722 5.036737 CGAAAGCAGAGAAAAAGCAAGAAA 58.963 37.500 0.00 0.00 0.00 2.52
731 732 6.537301 TCTTTTCAGTTACGAAAGCAGAGAAA 59.463 34.615 0.00 0.00 36.31 2.52
736 737 5.659048 AGTCTTTTCAGTTACGAAAGCAG 57.341 39.130 0.00 1.84 36.31 4.24
784 788 6.687081 TTCTTTTGGTCAATTGTTCTACGT 57.313 33.333 5.13 0.00 0.00 3.57
793 797 3.044894 TGGCCCTTTCTTTTGGTCAATT 58.955 40.909 0.00 0.00 29.08 2.32
794 798 2.368548 GTGGCCCTTTCTTTTGGTCAAT 59.631 45.455 0.00 0.00 35.13 2.57
795 799 1.760029 GTGGCCCTTTCTTTTGGTCAA 59.240 47.619 0.00 0.00 35.13 3.18
796 800 1.408969 GTGGCCCTTTCTTTTGGTCA 58.591 50.000 0.00 0.00 0.00 4.02
799 803 1.665442 CCGTGGCCCTTTCTTTTGG 59.335 57.895 0.00 0.00 0.00 3.28
800 804 1.006220 GCCGTGGCCCTTTCTTTTG 60.006 57.895 0.00 0.00 34.56 2.44
840 858 0.037326 GTGGCTACAGTACAGCAGCA 60.037 55.000 12.05 0.00 40.95 4.41
845 863 3.244078 TGGTTTCAGTGGCTACAGTACAG 60.244 47.826 2.02 0.00 0.00 2.74
846 864 2.701423 TGGTTTCAGTGGCTACAGTACA 59.299 45.455 2.02 0.00 0.00 2.90
847 865 3.064931 GTGGTTTCAGTGGCTACAGTAC 58.935 50.000 2.02 0.00 0.00 2.73
848 866 2.701423 TGTGGTTTCAGTGGCTACAGTA 59.299 45.455 2.02 0.00 0.00 2.74
849 867 1.488812 TGTGGTTTCAGTGGCTACAGT 59.511 47.619 2.02 0.00 0.00 3.55
860 878 0.179150 GCTGCAAACGTGTGGTTTCA 60.179 50.000 8.05 0.00 45.60 2.69
892 910 1.168714 GAGGAGCACGGCTGATTTTT 58.831 50.000 0.00 0.00 39.88 1.94
1056 1077 3.071206 GGGGAGCAGAGCGACAGA 61.071 66.667 0.00 0.00 0.00 3.41
1074 1095 2.876955 CGGCCTACGGTCGTGTAA 59.123 61.111 0.00 0.00 46.58 2.41
1336 1405 7.385778 AGTACTAGAAACTAGTGCTCTGAAG 57.614 40.000 18.58 9.50 36.04 3.02
1419 1488 0.539051 CGGAGAGCAGTTCCTGGATT 59.461 55.000 0.00 0.00 32.34 3.01
1420 1489 0.324738 TCGGAGAGCAGTTCCTGGAT 60.325 55.000 0.00 0.00 32.34 3.41
1421 1490 1.076727 TCGGAGAGCAGTTCCTGGA 59.923 57.895 0.00 0.00 32.34 3.86
1422 1491 3.700109 TCGGAGAGCAGTTCCTGG 58.300 61.111 0.00 0.00 32.34 4.45
1574 1643 3.365364 GGCCGAAACTTGTTCAGATTGAG 60.365 47.826 0.00 0.00 0.00 3.02
1575 1644 2.552315 GGCCGAAACTTGTTCAGATTGA 59.448 45.455 0.00 0.00 0.00 2.57
1605 1676 3.691118 TCATCTGTAACAAGCAAGCCATC 59.309 43.478 0.00 0.00 0.00 3.51
1634 1705 5.332581 CGCACATTAGATACTTGACGAATGG 60.333 44.000 0.00 0.00 34.91 3.16
1635 1706 5.660391 CGCACATTAGATACTTGACGAATG 58.340 41.667 0.00 0.00 36.03 2.67
1645 1716 3.245284 ACACGATTGCGCACATTAGATAC 59.755 43.478 11.12 0.00 42.48 2.24
1646 1717 3.245048 CACACGATTGCGCACATTAGATA 59.755 43.478 11.12 0.00 42.48 1.98
1697 1768 4.657824 ACGTTCTCCCCGTGTGCG 62.658 66.667 0.00 0.00 37.12 5.34
1766 1837 1.609555 CCTACAGAGGTCTCATACGCC 59.390 57.143 0.55 0.00 38.16 5.68
1775 1846 2.933056 GCACTGCTTTCCTACAGAGGTC 60.933 54.545 0.00 0.00 44.19 3.85
1821 1892 5.299028 GGAGGGAGTAGTACAAAGTAGTAGC 59.701 48.000 2.52 0.00 0.00 3.58
1839 1910 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
1840 1911 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
1841 1912 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
1842 1913 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
1843 1914 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
1844 1915 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
1845 1916 3.495193 TCGAGACAAGTAATTCCGAACG 58.505 45.455 0.00 0.00 0.00 3.95
1846 1917 7.306632 CCATATTCGAGACAAGTAATTCCGAAC 60.307 40.741 0.00 0.00 37.38 3.95
1847 1918 6.700081 CCATATTCGAGACAAGTAATTCCGAA 59.300 38.462 0.00 0.00 38.59 4.30
1848 1919 6.040054 TCCATATTCGAGACAAGTAATTCCGA 59.960 38.462 0.00 0.00 0.00 4.55
1849 1920 6.213677 TCCATATTCGAGACAAGTAATTCCG 58.786 40.000 0.00 0.00 0.00 4.30
1850 1921 7.657761 ACATCCATATTCGAGACAAGTAATTCC 59.342 37.037 0.00 0.00 0.00 3.01
1851 1922 8.594881 ACATCCATATTCGAGACAAGTAATTC 57.405 34.615 0.00 0.00 0.00 2.17
1853 1924 9.862371 GATACATCCATATTCGAGACAAGTAAT 57.138 33.333 0.00 0.00 0.00 1.89
1854 1925 9.078990 AGATACATCCATATTCGAGACAAGTAA 57.921 33.333 0.00 0.00 0.00 2.24
1855 1926 8.637196 AGATACATCCATATTCGAGACAAGTA 57.363 34.615 0.00 0.00 0.00 2.24
1856 1927 7.531857 AGATACATCCATATTCGAGACAAGT 57.468 36.000 0.00 0.00 0.00 3.16
1857 1928 8.951243 TCTAGATACATCCATATTCGAGACAAG 58.049 37.037 0.00 0.00 0.00 3.16
1858 1929 8.863872 TCTAGATACATCCATATTCGAGACAA 57.136 34.615 0.00 0.00 0.00 3.18
1859 1930 8.731605 GTTCTAGATACATCCATATTCGAGACA 58.268 37.037 0.00 0.00 0.00 3.41
1860 1931 8.952278 AGTTCTAGATACATCCATATTCGAGAC 58.048 37.037 0.00 0.00 0.00 3.36
1888 1959 9.234384 CGAAAACAGATGTATCTAGACGTATTT 57.766 33.333 0.00 0.00 34.85 1.40
1889 1960 7.378995 GCGAAAACAGATGTATCTAGACGTATT 59.621 37.037 0.00 0.00 34.85 1.89
1890 1961 6.856938 GCGAAAACAGATGTATCTAGACGTAT 59.143 38.462 0.00 0.00 34.85 3.06
1891 1962 6.197276 GCGAAAACAGATGTATCTAGACGTA 58.803 40.000 0.00 0.00 34.85 3.57
1892 1963 5.035443 GCGAAAACAGATGTATCTAGACGT 58.965 41.667 0.00 0.00 34.85 4.34
1893 1964 4.144902 CGCGAAAACAGATGTATCTAGACG 59.855 45.833 0.00 0.00 34.85 4.18
1894 1965 5.171695 GTCGCGAAAACAGATGTATCTAGAC 59.828 44.000 12.06 0.00 34.85 2.59
1895 1966 5.163693 TGTCGCGAAAACAGATGTATCTAGA 60.164 40.000 12.06 0.00 34.85 2.43
1896 1967 5.034797 TGTCGCGAAAACAGATGTATCTAG 58.965 41.667 12.06 0.00 34.85 2.43
1897 1968 4.989044 TGTCGCGAAAACAGATGTATCTA 58.011 39.130 12.06 0.00 34.85 1.98
1898 1969 3.845178 TGTCGCGAAAACAGATGTATCT 58.155 40.909 12.06 0.00 37.72 1.98
1899 1970 4.091509 ACTTGTCGCGAAAACAGATGTATC 59.908 41.667 12.06 0.00 0.00 2.24
1900 1971 3.994392 ACTTGTCGCGAAAACAGATGTAT 59.006 39.130 12.06 0.00 0.00 2.29
1901 1972 3.386486 ACTTGTCGCGAAAACAGATGTA 58.614 40.909 12.06 0.00 0.00 2.29
1902 1973 2.210116 ACTTGTCGCGAAAACAGATGT 58.790 42.857 12.06 2.12 0.00 3.06
1903 1974 2.949714 ACTTGTCGCGAAAACAGATG 57.050 45.000 12.06 1.35 0.00 2.90
1904 1975 5.390567 GGAATTACTTGTCGCGAAAACAGAT 60.391 40.000 12.06 0.07 0.00 2.90
1905 1976 4.084223 GGAATTACTTGTCGCGAAAACAGA 60.084 41.667 12.06 0.00 0.00 3.41
1906 1977 4.148891 GGAATTACTTGTCGCGAAAACAG 58.851 43.478 12.06 2.76 0.00 3.16
1907 1978 3.363182 CGGAATTACTTGTCGCGAAAACA 60.363 43.478 12.06 1.66 0.00 2.83
1908 1979 3.120923 TCGGAATTACTTGTCGCGAAAAC 60.121 43.478 12.06 0.00 0.00 2.43
1909 1980 3.058450 TCGGAATTACTTGTCGCGAAAA 58.942 40.909 12.06 12.01 0.00 2.29
1910 1981 2.674954 TCGGAATTACTTGTCGCGAAA 58.325 42.857 12.06 0.54 0.00 3.46
1911 1982 2.350899 TCGGAATTACTTGTCGCGAA 57.649 45.000 12.06 0.00 0.00 4.70
1912 1983 1.987770 GTTCGGAATTACTTGTCGCGA 59.012 47.619 3.71 3.71 0.00 5.87
1913 1984 1.266211 CGTTCGGAATTACTTGTCGCG 60.266 52.381 0.00 0.00 0.00 5.87
1914 1985 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
1915 1986 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
1916 1987 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
1917 1988 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
1918 1989 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
1919 1990 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
1920 1991 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
1921 1992 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1922 1993 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1923 1994 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
1924 1995 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
1925 1996 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
1926 1997 0.038744 AAGTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
1927 1998 0.455005 GAAGTACTCCCTCCGTTCGG 59.545 60.000 4.74 4.74 0.00 4.30
1928 1999 1.461559 AGAAGTACTCCCTCCGTTCG 58.538 55.000 0.00 0.00 0.00 3.95
1929 2000 3.380954 CCTAAGAAGTACTCCCTCCGTTC 59.619 52.174 0.00 0.00 0.00 3.95
1930 2001 3.363627 CCTAAGAAGTACTCCCTCCGTT 58.636 50.000 0.00 0.00 0.00 4.44
1931 2002 2.357986 CCCTAAGAAGTACTCCCTCCGT 60.358 54.545 0.00 0.00 0.00 4.69
1932 2003 2.308690 CCCTAAGAAGTACTCCCTCCG 58.691 57.143 0.00 0.00 0.00 4.63
1933 2004 3.052717 AGACCCTAAGAAGTACTCCCTCC 60.053 52.174 0.00 0.00 0.00 4.30
1934 2005 4.254039 AGACCCTAAGAAGTACTCCCTC 57.746 50.000 0.00 0.00 0.00 4.30
1935 2006 5.045140 TCTAGACCCTAAGAAGTACTCCCT 58.955 45.833 0.00 0.00 0.00 4.20
1936 2007 5.385628 TCTAGACCCTAAGAAGTACTCCC 57.614 47.826 0.00 0.00 0.00 4.30
1937 2008 9.016438 CAATATCTAGACCCTAAGAAGTACTCC 57.984 40.741 0.00 0.00 0.00 3.85
1938 2009 9.577222 ACAATATCTAGACCCTAAGAAGTACTC 57.423 37.037 0.00 0.00 0.00 2.59
1970 2068 1.672881 CGGCAATGGACTTCTCATTCC 59.327 52.381 0.00 0.00 33.08 3.01
2016 2114 6.205464 ACGTTTCCTATATCCTTGCATTCATG 59.795 38.462 0.00 0.00 0.00 3.07
2018 2116 5.680619 ACGTTTCCTATATCCTTGCATTCA 58.319 37.500 0.00 0.00 0.00 2.57
2075 2200 2.852413 CGTACGTTTCCTGCAGACATAG 59.148 50.000 17.39 6.10 0.00 2.23
2220 2362 2.808543 CAGTTCAAGCACCCAAGTAGAC 59.191 50.000 0.00 0.00 0.00 2.59
2229 2371 3.996480 AGTAACTCTCAGTTCAAGCACC 58.004 45.455 0.00 0.00 39.51 5.01
2266 2408 0.695462 TGTGGATGGAGGGAGATGGG 60.695 60.000 0.00 0.00 0.00 4.00
2273 2415 0.695462 TGGATCCTGTGGATGGAGGG 60.695 60.000 14.23 0.00 43.27 4.30
2298 2440 7.731688 AGGCCTGGATTGATAATGATATTTGTT 59.268 33.333 3.11 0.00 0.00 2.83
2402 2544 3.600388 CCTGTTCCATAGTCCAAGACAC 58.400 50.000 0.00 0.00 34.60 3.67
2430 2572 0.811281 GAGCTGCAATACCCAACACC 59.189 55.000 1.02 0.00 0.00 4.16
2465 2607 7.094118 TGCTGGTAGTAAACAAGAACAGTTTTT 60.094 33.333 0.00 0.00 39.65 1.94
2560 2712 0.538584 CAGTGGATAGAGCAGCACCA 59.461 55.000 0.00 0.00 0.00 4.17
2608 2760 1.416813 GCATGTTCTCACGAGCGGAG 61.417 60.000 0.00 0.00 0.00 4.63
2635 2787 3.824133 CATTCTGCCAGAATCCATACCA 58.176 45.455 16.92 0.00 42.67 3.25
2647 2799 0.111061 AGTGAACCAGCATTCTGCCA 59.889 50.000 0.00 0.00 46.52 4.92
2649 2801 1.068055 CCAAGTGAACCAGCATTCTGC 60.068 52.381 0.00 0.00 45.46 4.26
2924 3079 5.351458 ACCAAGAAACAAAACTCTGAATGC 58.649 37.500 0.00 0.00 0.00 3.56
3007 3162 2.327325 ACCTGGAGTAAGCCTTCTCA 57.673 50.000 0.00 0.00 32.93 3.27
3010 3165 3.369576 CCAAGTACCTGGAGTAAGCCTTC 60.370 52.174 4.30 0.00 38.96 3.46
3133 3291 3.181461 CGGGAAGATAAGGTCAATCTGCT 60.181 47.826 0.00 0.00 33.95 4.24
3149 3307 0.905357 ATCCTTCACCAGTCGGGAAG 59.095 55.000 0.00 0.00 41.15 3.46
3233 3392 2.427453 CAGTGTAGCTCGACAATACCCT 59.573 50.000 0.00 0.00 0.00 4.34
3283 3442 0.742281 AGCAGCAGTTAGGCATCACG 60.742 55.000 0.00 0.00 35.83 4.35
3307 3466 1.376466 GGTCAGTGACATGTGGGCT 59.624 57.895 24.20 0.00 33.68 5.19
3334 3493 2.351726 GCTTCAATGCCGTAACTACAGG 59.648 50.000 0.00 0.00 0.00 4.00
3338 3497 3.056107 ACTGAGCTTCAATGCCGTAACTA 60.056 43.478 0.00 0.00 0.00 2.24
3349 3508 5.474578 AGTGATGTAAGACTGAGCTTCAA 57.525 39.130 0.00 0.00 0.00 2.69
3376 3535 2.950309 ACACGTCCTCTTATCATACGCT 59.050 45.455 0.00 0.00 37.07 5.07
3437 3596 7.531534 GCGAAATAACGTTATACAGTGTTTGTT 59.468 33.333 20.62 7.62 37.12 2.83
3498 3660 6.289901 GCGCTATCGTAGTGATAAAAATGAC 58.710 40.000 0.00 0.00 39.06 3.06
3522 3684 2.002586 CTGCTACCACACATTTCCTCG 58.997 52.381 0.00 0.00 0.00 4.63
3540 3702 6.073314 ACCAATCTGGGATTTTGATATCCTG 58.927 40.000 0.00 0.00 43.37 3.86
3609 3771 9.003112 CATCGTCATGTTTTCTGATTCATTTAC 57.997 33.333 0.00 0.00 0.00 2.01
3630 3792 3.244078 TGCAGTTAGTCTGAAACCATCGT 60.244 43.478 0.00 0.00 46.27 3.73
3654 3816 4.098914 ACTACCAATGCCTTTTCAGTGA 57.901 40.909 0.00 0.00 34.31 3.41
3656 3818 4.980573 TGTACTACCAATGCCTTTTCAGT 58.019 39.130 0.00 0.00 0.00 3.41
3659 3821 5.472137 TGAGTTGTACTACCAATGCCTTTTC 59.528 40.000 3.72 0.00 0.00 2.29
3664 3826 2.671396 CGTGAGTTGTACTACCAATGCC 59.329 50.000 3.72 0.00 0.00 4.40
3776 3938 7.337150 ACAATAGCGTGTTGAATTTGATTTG 57.663 32.000 5.90 0.00 0.00 2.32
3777 3939 8.911662 GTTACAATAGCGTGTTGAATTTGATTT 58.088 29.630 5.90 0.00 32.75 2.17
3856 4018 6.128172 CCTGTCGCTAATGAATGAGTTTTTCT 60.128 38.462 0.00 0.00 0.00 2.52
3877 4041 0.995024 AGATTGCTAACCAGGCCTGT 59.005 50.000 30.63 16.39 0.00 4.00
3904 4068 3.997021 ACAAGTCCTTCAAAGCATACTCG 59.003 43.478 0.00 0.00 0.00 4.18
3921 4085 2.690653 TTTGGCCTGCCGCTACAAGT 62.691 55.000 3.32 0.00 39.42 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.