Multiple sequence alignment - TraesCS1A01G305900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G305900 chr1A 100.000 4612 0 0 1 4612 498169216 498173827 0.000000e+00 8517.0
1 TraesCS1A01G305900 chr1B 88.253 2639 198 61 10 2586 541005635 541008223 0.000000e+00 3053.0
2 TraesCS1A01G305900 chr1B 95.519 1205 45 3 2587 3790 541008275 541009471 0.000000e+00 1917.0
3 TraesCS1A01G305900 chr1B 97.701 87 2 0 4168 4254 541009777 541009863 2.870000e-32 150.0
4 TraesCS1A01G305900 chr1B 91.304 46 0 3 4298 4339 541009863 541009908 4.980000e-05 60.2
5 TraesCS1A01G305900 chr1D 89.339 2345 156 49 264 2586 403054265 403056537 0.000000e+00 2859.0
6 TraesCS1A01G305900 chr1D 94.191 1205 58 3 2587 3791 403056588 403057780 0.000000e+00 1827.0
7 TraesCS1A01G305900 chr1D 91.195 159 13 1 3787 3945 403057841 403057998 1.010000e-51 215.0
8 TraesCS1A01G305900 chr1D 96.639 119 1 1 4212 4327 403058365 403058483 1.310000e-45 195.0
9 TraesCS1A01G305900 chr1D 90.426 94 7 2 3979 4070 398871320 398871413 6.270000e-24 122.0
10 TraesCS1A01G305900 chr1D 95.556 45 2 0 4159 4203 403058082 403058126 6.400000e-09 73.1
11 TraesCS1A01G305900 chr3B 87.166 187 14 4 3981 4158 273242887 273242702 2.180000e-48 204.0
12 TraesCS1A01G305900 chr3B 85.625 160 18 4 4455 4612 530240453 530240297 3.690000e-36 163.0
13 TraesCS1A01G305900 chr2D 84.951 206 20 5 3979 4175 26038776 26038979 1.010000e-46 198.0
14 TraesCS1A01G305900 chr2D 85.789 190 16 5 3985 4165 446272764 446272951 1.690000e-44 191.0
15 TraesCS1A01G305900 chr2D 85.128 195 18 5 3982 4167 465021394 465021202 6.090000e-44 189.0
16 TraesCS1A01G305900 chr2D 89.865 148 12 2 4454 4599 616197699 616197845 2.190000e-43 187.0
17 TraesCS1A01G305900 chr2D 82.258 186 23 5 3981 4158 623514606 623514423 7.990000e-33 152.0
18 TraesCS1A01G305900 chr2A 85.492 193 17 5 3976 4159 610645082 610645272 1.690000e-44 191.0
19 TraesCS1A01G305900 chr2A 84.158 202 22 4 3979 4171 776598146 776598346 2.190000e-43 187.0
20 TraesCS1A01G305900 chr5D 85.561 187 19 4 3980 4159 108091395 108091580 6.090000e-44 189.0
21 TraesCS1A01G305900 chr5D 84.459 148 17 5 4455 4598 481877016 481876871 1.730000e-29 141.0
22 TraesCS1A01G305900 chr3A 85.946 185 16 4 3985 4160 84273428 84273245 6.090000e-44 189.0
23 TraesCS1A01G305900 chr5B 85.106 188 18 6 3982 4160 620957071 620957257 2.830000e-42 183.0
24 TraesCS1A01G305900 chr5B 85.034 147 17 4 4455 4598 397511525 397511669 1.340000e-30 145.0
25 TraesCS1A01G305900 chr7D 84.656 189 20 5 3980 4160 574697514 574697327 3.670000e-41 180.0
26 TraesCS1A01G305900 chr6B 84.324 185 18 5 3985 4160 79556122 79555940 2.210000e-38 171.0
27 TraesCS1A01G305900 chr6B 85.034 147 15 6 4455 4599 648108517 648108658 4.810000e-30 143.0
28 TraesCS1A01G305900 chrUn 85.802 162 13 6 4444 4598 262554072 262553914 3.690000e-36 163.0
29 TraesCS1A01G305900 chr6D 83.511 188 12 5 3981 4160 470111692 470111516 1.720000e-34 158.0
30 TraesCS1A01G305900 chr5A 85.915 142 18 2 4455 4595 70494298 70494438 2.870000e-32 150.0
31 TraesCS1A01G305900 chr5A 85.135 148 15 4 4455 4598 232839745 232839601 1.340000e-30 145.0
32 TraesCS1A01G305900 chr4A 82.682 179 16 6 3985 4160 605577345 605577511 1.340000e-30 145.0
33 TraesCS1A01G305900 chr4B 81.915 188 15 6 3985 4164 598403360 598403536 1.730000e-29 141.0
34 TraesCS1A01G305900 chr4B 84.247 146 18 3 4455 4598 104343332 104343190 2.240000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G305900 chr1A 498169216 498173827 4611 False 8517.00 8517 100.00000 1 4612 1 chr1A.!!$F1 4611
1 TraesCS1A01G305900 chr1B 541005635 541009908 4273 False 1295.05 3053 93.19425 10 4339 4 chr1B.!!$F1 4329
2 TraesCS1A01G305900 chr1D 403054265 403058483 4218 False 1033.82 2859 93.38400 264 4327 5 chr1D.!!$F2 4063

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 0.105408 AACGTTCGTGGGCAGTAAGT 59.895 50.0 0.00 0.0 0.0 2.24 F
26 27 0.105408 ACGTTCGTGGGCAGTAAGTT 59.895 50.0 0.00 0.0 0.0 2.66 F
546 547 0.251916 ATTTCATCAAGCGTCCCGGA 59.748 50.0 0.73 0.0 0.0 5.14 F
1427 1481 0.393537 GGCTGTGTCTGATTCTGGGG 60.394 60.0 0.00 0.0 0.0 4.96 F
2952 3083 0.250727 TTGCAGAAGGAGGGGAAACG 60.251 55.0 0.00 0.0 0.0 3.60 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1552 1606 0.037975 AGCTGAAAAGCAAATGGCCG 60.038 50.000 0.0 0.0 46.50 6.13 R
1869 1937 5.009631 TCCTACAAGTTTGGACATGATTGG 58.990 41.667 0.0 0.0 0.00 3.16 R
2083 2151 2.027561 CCGTTGGACTGGATTCTAACCA 60.028 50.000 0.0 0.0 34.38 3.67 R
3052 3183 0.657840 CGGTGCTAATGGCTACTTGC 59.342 55.000 0.0 0.0 42.39 4.01 R
4141 4395 0.184933 CAGGGGGTGTTTGGTTCAGA 59.815 55.000 0.0 0.0 0.00 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.748729 AGGAAAAACGTTCGTGGGCA 60.749 50.000 0.00 0.00 0.00 5.36
25 26 0.105408 AACGTTCGTGGGCAGTAAGT 59.895 50.000 0.00 0.00 0.00 2.24
26 27 0.105408 ACGTTCGTGGGCAGTAAGTT 59.895 50.000 0.00 0.00 0.00 2.66
31 32 1.156736 CGTGGGCAGTAAGTTGGAAG 58.843 55.000 0.00 0.00 0.00 3.46
35 36 3.826729 GTGGGCAGTAAGTTGGAAGAAAT 59.173 43.478 0.00 0.00 0.00 2.17
44 45 8.341173 CAGTAAGTTGGAAGAAATAGATGATGC 58.659 37.037 0.00 0.00 0.00 3.91
45 46 8.049117 AGTAAGTTGGAAGAAATAGATGATGCA 58.951 33.333 0.00 0.00 0.00 3.96
101 102 3.913548 TCCACAATTTGTGTTCCATCG 57.086 42.857 24.01 10.14 46.45 3.84
106 107 3.181397 CAATTTGTGTTCCATCGCATCC 58.819 45.455 0.00 0.00 0.00 3.51
112 113 3.057596 TGTGTTCCATCGCATCCTTTTTC 60.058 43.478 0.00 0.00 0.00 2.29
113 114 2.491693 TGTTCCATCGCATCCTTTTTCC 59.508 45.455 0.00 0.00 0.00 3.13
117 118 3.831911 TCCATCGCATCCTTTTTCCTTTT 59.168 39.130 0.00 0.00 0.00 2.27
126 127 7.041440 CGCATCCTTTTTCCTTTTACCAAAAAT 60.041 33.333 0.00 0.00 34.18 1.82
142 143 4.274069 CAAAAATCATCGCATCACTACCG 58.726 43.478 0.00 0.00 0.00 4.02
157 158 3.627577 CACTACCGATGCCATAAAAGCTT 59.372 43.478 0.00 0.00 0.00 3.74
192 193 6.515272 AGTTCAGTCAACAAAACACAAGAT 57.485 33.333 0.00 0.00 37.48 2.40
197 198 6.806249 TCAGTCAACAAAACACAAGATTTCAC 59.194 34.615 0.00 0.00 0.00 3.18
226 227 5.347620 AAGGGGTGTTTTAACCTGAAAAC 57.652 39.130 5.09 5.09 45.51 2.43
243 244 6.711569 CTGAAAACCAGGTCCACAAGTAGTG 61.712 48.000 0.00 0.00 42.29 2.74
267 268 4.642429 AGGAACACACAAACTAAGCCTAG 58.358 43.478 0.00 0.00 0.00 3.02
281 282 7.974730 ACTAAGCCTAGTTTAGATGGTTAGT 57.025 36.000 14.72 12.35 34.53 2.24
284 285 9.668497 CTAAGCCTAGTTTAGATGGTTAGTTTT 57.332 33.333 5.69 0.00 29.81 2.43
288 289 9.662947 GCCTAGTTTAGATGGTTAGTTTTCTTA 57.337 33.333 0.00 0.00 0.00 2.10
308 309 0.404040 TGATGGAACCAACCCACCTC 59.596 55.000 0.00 0.00 36.36 3.85
328 329 1.717645 CGGTTCGAGTCGTAAACTTGG 59.282 52.381 13.12 1.60 39.56 3.61
337 338 2.097056 GTCGTAAACTTGGCACGTTCTC 60.097 50.000 9.97 5.67 37.02 2.87
352 353 2.734606 CGTTCTCGTGAAAAGCACCATA 59.265 45.455 0.74 0.00 44.85 2.74
360 361 3.000925 GTGAAAAGCACCATATCGTACGG 59.999 47.826 16.52 0.68 41.78 4.02
371 372 2.665649 ATCGTACGGTGCTGAATCAA 57.334 45.000 16.52 0.00 0.00 2.57
376 377 1.909700 ACGGTGCTGAATCAAATGGT 58.090 45.000 0.00 0.00 0.00 3.55
387 388 9.770097 TGCTGAATCAAATGGTTTTAAATACAA 57.230 25.926 0.00 0.00 0.00 2.41
421 422 4.430007 ACATCGCGTCTAAGCTTTTGATA 58.570 39.130 3.20 0.00 34.40 2.15
424 425 5.199424 TCGCGTCTAAGCTTTTGATAAAC 57.801 39.130 3.20 0.00 34.40 2.01
426 427 5.350365 TCGCGTCTAAGCTTTTGATAAACAT 59.650 36.000 3.20 0.00 34.40 2.71
436 437 7.985476 AGCTTTTGATAAACATATTGCTACGT 58.015 30.769 0.00 0.00 0.00 3.57
438 439 7.696453 GCTTTTGATAAACATATTGCTACGTGT 59.304 33.333 0.00 0.00 0.00 4.49
441 442 8.936070 TTGATAAACATATTGCTACGTGTAGT 57.064 30.769 0.00 0.00 35.65 2.73
457 458 5.634859 ACGTGTAGTGGTTACTTTAAATCGG 59.365 40.000 0.00 0.00 38.36 4.18
537 538 9.199982 ACTTTCAAGCACAATTATTTCATCAAG 57.800 29.630 0.00 0.00 0.00 3.02
540 541 5.314923 AGCACAATTATTTCATCAAGCGT 57.685 34.783 0.00 0.00 0.00 5.07
543 544 5.036737 CACAATTATTTCATCAAGCGTCCC 58.963 41.667 0.00 0.00 0.00 4.46
545 546 1.948104 TATTTCATCAAGCGTCCCGG 58.052 50.000 0.00 0.00 0.00 5.73
546 547 0.251916 ATTTCATCAAGCGTCCCGGA 59.748 50.000 0.73 0.00 0.00 5.14
547 548 0.251916 TTTCATCAAGCGTCCCGGAT 59.748 50.000 0.73 0.00 0.00 4.18
548 549 0.461870 TTCATCAAGCGTCCCGGATG 60.462 55.000 0.73 1.81 38.73 3.51
549 550 1.153369 CATCAAGCGTCCCGGATGT 60.153 57.895 0.73 0.00 34.02 3.06
551 552 2.593468 ATCAAGCGTCCCGGATGTGG 62.593 60.000 0.73 0.00 0.00 4.17
553 554 3.310860 AAGCGTCCCGGATGTGGTC 62.311 63.158 0.73 0.00 0.00 4.02
574 575 2.538333 CGAGGCGCTGATTTCAAAGATG 60.538 50.000 7.64 0.00 0.00 2.90
588 590 6.405278 TTCAAAGATGAGAAGGGTTTTTCC 57.595 37.500 0.00 0.00 36.78 3.13
591 593 4.039603 AGATGAGAAGGGTTTTTCCAGG 57.960 45.455 0.00 0.00 38.11 4.45
592 594 1.995376 TGAGAAGGGTTTTTCCAGGC 58.005 50.000 0.00 0.00 38.11 4.85
620 622 4.686554 AGTCGATGTTCAACTCAAAGCTAC 59.313 41.667 0.00 0.00 0.00 3.58
656 659 8.351495 TCAAAATTTGATGCAGACTTTTGTAC 57.649 30.769 4.03 0.00 35.89 2.90
746 761 3.595758 CCCATGATTTCGCCGGGC 61.596 66.667 9.54 9.54 0.00 6.13
774 789 1.154836 CGTTTCTTCGCTGCGTGAC 60.155 57.895 22.48 12.61 0.00 3.67
788 803 3.687102 TGACGGCCGTTGGATCGT 61.687 61.111 34.65 6.21 36.99 3.73
798 813 1.202256 CGTTGGATCGTCGGATTCTGA 60.202 52.381 0.00 0.00 31.51 3.27
853 868 4.026357 AGTCCCCCACTCCCTCCC 62.026 72.222 0.00 0.00 0.00 4.30
855 870 3.695825 TCCCCCACTCCCTCCCTC 61.696 72.222 0.00 0.00 0.00 4.30
941 978 4.516195 GCGTCTTCTCCGCCTCCC 62.516 72.222 0.00 0.00 45.20 4.30
942 979 2.756283 CGTCTTCTCCGCCTCCCT 60.756 66.667 0.00 0.00 0.00 4.20
943 980 2.896443 GTCTTCTCCGCCTCCCTG 59.104 66.667 0.00 0.00 0.00 4.45
959 996 4.776322 TGCCTCCATTGGTCGCCG 62.776 66.667 1.86 0.00 0.00 6.46
995 1033 0.460722 GAGGGAGAGGTCGGCTTAAC 59.539 60.000 0.00 0.00 0.00 2.01
1042 1092 3.522731 CCGCTCTGTCCCTCCTCG 61.523 72.222 0.00 0.00 0.00 4.63
1044 1094 2.757917 GCTCTGTCCCTCCTCGCT 60.758 66.667 0.00 0.00 0.00 4.93
1276 1329 0.458543 AGACGGCTGATACGTGCTTG 60.459 55.000 0.00 0.00 45.68 4.01
1282 1335 0.940126 CTGATACGTGCTTGATGGCC 59.060 55.000 0.00 0.00 0.00 5.36
1382 1435 1.384502 CTGCTCCCAGTCCCCCATA 60.385 63.158 0.00 0.00 34.31 2.74
1383 1436 1.384502 TGCTCCCAGTCCCCCATAG 60.385 63.158 0.00 0.00 0.00 2.23
1386 1439 1.893315 CTCCCAGTCCCCCATAGAAA 58.107 55.000 0.00 0.00 0.00 2.52
1388 1441 1.082194 TCCCAGTCCCCCATAGAAACT 59.918 52.381 0.00 0.00 0.00 2.66
1398 1451 4.219115 CCCCATAGAAACTCAGAGAGCTA 58.781 47.826 3.79 3.04 32.04 3.32
1414 1468 1.660560 GCTATTGCTGTGGGGCTGTG 61.661 60.000 0.00 0.00 36.03 3.66
1427 1481 0.393537 GGCTGTGTCTGATTCTGGGG 60.394 60.000 0.00 0.00 0.00 4.96
1489 1543 2.879462 GTCGCCGATGACACGTCC 60.879 66.667 0.00 0.00 38.75 4.79
1538 1592 2.892425 GCTCCGGCACCTTCATCG 60.892 66.667 0.00 0.00 38.54 3.84
1586 1640 7.470900 GCTTTTCAGCTCATAGGCATTATATC 58.529 38.462 0.00 0.00 43.51 1.63
1612 1666 9.374838 CTTAGAAAAGAAAATTCCATGGATTGG 57.625 33.333 17.06 0.00 39.93 3.16
1664 1718 5.604758 TTGAGCTCAGCATCTTATGTAGT 57.395 39.130 17.43 0.00 0.00 2.73
1665 1719 6.715347 TTGAGCTCAGCATCTTATGTAGTA 57.285 37.500 17.43 0.00 0.00 1.82
1666 1720 6.078202 TGAGCTCAGCATCTTATGTAGTAC 57.922 41.667 13.74 0.00 0.00 2.73
1728 1782 7.394641 TCATATGTACTCTCTTATAGGGCACTG 59.605 40.741 0.00 0.00 0.00 3.66
1768 1822 8.796475 TCTTCATGTTCTTTTATTTCTCAAGGG 58.204 33.333 0.00 0.00 0.00 3.95
1839 1905 7.544915 GGAGTACAGTACAGTTCAGGTATTTTC 59.455 40.741 13.37 0.00 0.00 2.29
1840 1906 8.191534 AGTACAGTACAGTTCAGGTATTTTCT 57.808 34.615 13.37 0.00 0.00 2.52
1842 1908 7.964604 ACAGTACAGTTCAGGTATTTTCTTC 57.035 36.000 0.00 0.00 0.00 2.87
1843 1909 7.736893 ACAGTACAGTTCAGGTATTTTCTTCT 58.263 34.615 0.00 0.00 0.00 2.85
1844 1910 7.657761 ACAGTACAGTTCAGGTATTTTCTTCTG 59.342 37.037 0.00 0.00 0.00 3.02
1845 1911 7.872993 CAGTACAGTTCAGGTATTTTCTTCTGA 59.127 37.037 0.00 0.00 34.84 3.27
1847 1913 7.678947 ACAGTTCAGGTATTTTCTTCTGATG 57.321 36.000 0.00 0.00 36.34 3.07
1848 1914 7.453393 ACAGTTCAGGTATTTTCTTCTGATGA 58.547 34.615 0.00 0.00 36.34 2.92
1849 1915 8.105829 ACAGTTCAGGTATTTTCTTCTGATGAT 58.894 33.333 0.00 0.00 36.34 2.45
1850 1916 8.610896 CAGTTCAGGTATTTTCTTCTGATGATC 58.389 37.037 0.00 0.00 36.34 2.92
1851 1917 8.324306 AGTTCAGGTATTTTCTTCTGATGATCA 58.676 33.333 0.00 0.00 36.34 2.92
1852 1918 8.950210 GTTCAGGTATTTTCTTCTGATGATCAA 58.050 33.333 0.00 0.00 36.34 2.57
2011 2079 2.666317 GGGGGTGCTTATTATTGCAGT 58.334 47.619 0.00 0.00 40.06 4.40
2070 2138 7.265599 TGTATTTGAGTTTGATAGGGGAAGA 57.734 36.000 0.00 0.00 0.00 2.87
2073 2141 5.843019 TTGAGTTTGATAGGGGAAGAACT 57.157 39.130 0.00 0.00 0.00 3.01
2077 2145 7.066781 TGAGTTTGATAGGGGAAGAACTTTTT 58.933 34.615 0.00 0.00 0.00 1.94
2385 2464 5.764686 ACAACATGTCACACACTATGTTCAT 59.235 36.000 0.00 0.00 40.64 2.57
2466 2545 4.082408 GGGTTAAGAGCCATGGTGTTTTAC 60.082 45.833 14.67 8.83 43.10 2.01
2673 2803 9.243105 CTTGATAAAGAGGATTTTTCAGGGTTA 57.757 33.333 0.00 0.00 0.00 2.85
2832 2963 9.360093 GATATGCAAGTTCTAAGATATAAGCGT 57.640 33.333 0.00 0.00 0.00 5.07
2916 3047 4.260702 GGACATCGTGTAGCTACTGTACTC 60.261 50.000 23.84 11.24 0.00 2.59
2952 3083 0.250727 TTGCAGAAGGAGGGGAAACG 60.251 55.000 0.00 0.00 0.00 3.60
3052 3183 1.497991 TTTTTCGTCTGAGCCAGTCG 58.502 50.000 12.85 12.85 42.38 4.18
3079 3210 1.664151 GCCATTAGCACCGTAGTGTTC 59.336 52.381 0.00 0.00 46.35 3.18
3080 3211 2.677037 GCCATTAGCACCGTAGTGTTCT 60.677 50.000 0.00 0.00 46.35 3.01
3081 3212 3.187700 CCATTAGCACCGTAGTGTTCTC 58.812 50.000 0.00 0.00 46.35 2.87
3082 3213 3.187700 CATTAGCACCGTAGTGTTCTCC 58.812 50.000 0.00 0.00 46.35 3.71
3083 3214 2.211250 TAGCACCGTAGTGTTCTCCT 57.789 50.000 0.00 0.00 46.35 3.69
3084 3215 0.603569 AGCACCGTAGTGTTCTCCTG 59.396 55.000 0.00 0.00 46.35 3.86
3085 3216 0.317479 GCACCGTAGTGTTCTCCTGT 59.683 55.000 0.00 0.00 46.35 4.00
3086 3217 1.542915 GCACCGTAGTGTTCTCCTGTA 59.457 52.381 0.00 0.00 46.35 2.74
3090 3221 3.505293 ACCGTAGTGTTCTCCTGTACTTC 59.495 47.826 0.00 0.00 0.00 3.01
3124 3263 6.711194 CGATGACTCCTGTACTTATTCCTAGA 59.289 42.308 0.00 0.00 0.00 2.43
3223 3362 5.878116 ACTTGCAGGTATAATTTTCGTGCTA 59.122 36.000 0.00 11.37 41.48 3.49
3257 3396 2.800985 GCGGTCCTAATTCCCGAGTTAC 60.801 54.545 0.85 0.00 44.41 2.50
3258 3397 2.223900 CGGTCCTAATTCCCGAGTTACC 60.224 54.545 0.00 0.00 44.41 2.85
3362 3501 0.536460 TGTTCTTCAACCTTCGCCCC 60.536 55.000 0.00 0.00 0.00 5.80
3428 3567 2.059756 TCAAGGGGGAGAAATGGTCT 57.940 50.000 0.00 0.00 40.25 3.85
3475 3614 5.147330 TCGTTTGACAAGGTCTATCACAT 57.853 39.130 0.00 0.00 33.15 3.21
3664 3803 1.707989 TGCTGGAGTTGGGGTTCATAA 59.292 47.619 0.00 0.00 0.00 1.90
3757 3896 3.334583 TGTTACTCCCTGATGACAAGC 57.665 47.619 0.00 0.00 0.00 4.01
3774 3913 1.133809 AGCTGGTTCCTGGCTACCAA 61.134 55.000 17.52 6.11 43.46 3.67
3812 4016 1.071128 GCTAGGCAGGCAGAGATGG 59.929 63.158 0.00 0.00 0.00 3.51
3841 4045 3.007940 TGTTAGAGTTGGTCCATGACAGG 59.992 47.826 0.00 0.00 33.68 4.00
3862 4066 1.236616 TTCATGAGCTTGTGGTGCCG 61.237 55.000 0.00 0.00 0.00 5.69
3867 4071 0.594796 GAGCTTGTGGTGCCGTTTTG 60.595 55.000 0.00 0.00 0.00 2.44
3868 4072 1.140804 GCTTGTGGTGCCGTTTTGT 59.859 52.632 0.00 0.00 0.00 2.83
3869 4073 1.145162 GCTTGTGGTGCCGTTTTGTG 61.145 55.000 0.00 0.00 0.00 3.33
3870 4074 0.172352 CTTGTGGTGCCGTTTTGTGT 59.828 50.000 0.00 0.00 0.00 3.72
3871 4075 0.109086 TTGTGGTGCCGTTTTGTGTG 60.109 50.000 0.00 0.00 0.00 3.82
3872 4076 1.226831 GTGGTGCCGTTTTGTGTGG 60.227 57.895 0.00 0.00 0.00 4.17
3902 4109 5.962433 TGTAGGGACTGTAATCTCTTTTCG 58.038 41.667 0.00 0.00 41.52 3.46
3965 4219 2.749621 GCCCTGAATTTGACTACTGTGG 59.250 50.000 0.00 0.00 0.00 4.17
3966 4220 2.749621 CCCTGAATTTGACTACTGTGGC 59.250 50.000 0.00 0.00 0.00 5.01
3974 4228 7.333423 TGAATTTGACTACTGTGGCACTATTAC 59.667 37.037 19.83 6.75 0.00 1.89
3985 4239 4.091509 GTGGCACTATTACAACGAACTGAG 59.908 45.833 11.13 0.00 0.00 3.35
3986 4240 3.617263 GGCACTATTACAACGAACTGAGG 59.383 47.826 0.00 0.00 0.00 3.86
3987 4241 3.617263 GCACTATTACAACGAACTGAGGG 59.383 47.826 0.00 0.00 0.00 4.30
3988 4242 4.619863 GCACTATTACAACGAACTGAGGGA 60.620 45.833 0.00 0.00 0.00 4.20
3989 4243 5.103000 CACTATTACAACGAACTGAGGGAG 58.897 45.833 0.00 0.00 0.00 4.30
3990 4244 4.771054 ACTATTACAACGAACTGAGGGAGT 59.229 41.667 0.00 0.00 35.94 3.85
3991 4245 3.380479 TTACAACGAACTGAGGGAGTG 57.620 47.619 0.00 0.00 34.02 3.51
3992 4246 1.120530 ACAACGAACTGAGGGAGTGT 58.879 50.000 0.00 0.00 34.02 3.55
3993 4247 1.485066 ACAACGAACTGAGGGAGTGTT 59.515 47.619 0.00 0.00 34.02 3.32
3994 4248 2.093128 ACAACGAACTGAGGGAGTGTTT 60.093 45.455 0.00 0.00 34.02 2.83
3995 4249 2.240493 ACGAACTGAGGGAGTGTTTG 57.760 50.000 0.00 0.00 34.02 2.93
3996 4250 1.202651 ACGAACTGAGGGAGTGTTTGG 60.203 52.381 0.00 0.00 34.02 3.28
3997 4251 1.202651 CGAACTGAGGGAGTGTTTGGT 60.203 52.381 0.00 0.00 34.02 3.67
3998 4252 2.745152 CGAACTGAGGGAGTGTTTGGTT 60.745 50.000 0.00 0.00 34.02 3.67
3999 4253 2.640316 ACTGAGGGAGTGTTTGGTTC 57.360 50.000 0.00 0.00 31.75 3.62
4000 4254 1.843851 ACTGAGGGAGTGTTTGGTTCA 59.156 47.619 0.00 0.00 31.75 3.18
4001 4255 2.158755 ACTGAGGGAGTGTTTGGTTCAG 60.159 50.000 0.00 0.00 37.26 3.02
4002 4256 1.142870 TGAGGGAGTGTTTGGTTCAGG 59.857 52.381 0.00 0.00 0.00 3.86
4003 4257 0.478507 AGGGAGTGTTTGGTTCAGGG 59.521 55.000 0.00 0.00 0.00 4.45
4004 4258 0.476771 GGGAGTGTTTGGTTCAGGGA 59.523 55.000 0.00 0.00 0.00 4.20
4005 4259 1.605753 GGAGTGTTTGGTTCAGGGAC 58.394 55.000 0.00 0.00 0.00 4.46
4006 4260 1.143073 GGAGTGTTTGGTTCAGGGACT 59.857 52.381 0.00 0.00 43.88 3.85
4007 4261 2.422945 GGAGTGTTTGGTTCAGGGACTT 60.423 50.000 0.00 0.00 34.60 3.01
4008 4262 3.288092 GAGTGTTTGGTTCAGGGACTTT 58.712 45.455 0.00 0.00 34.60 2.66
4009 4263 3.699538 GAGTGTTTGGTTCAGGGACTTTT 59.300 43.478 0.00 0.00 34.60 2.27
4010 4264 4.093743 AGTGTTTGGTTCAGGGACTTTTT 58.906 39.130 0.00 0.00 34.60 1.94
4011 4265 5.265989 AGTGTTTGGTTCAGGGACTTTTTA 58.734 37.500 0.00 0.00 34.60 1.52
4012 4266 5.359860 AGTGTTTGGTTCAGGGACTTTTTAG 59.640 40.000 0.00 0.00 34.60 1.85
4013 4267 5.126545 GTGTTTGGTTCAGGGACTTTTTAGT 59.873 40.000 0.00 0.00 34.60 2.24
4014 4268 5.717654 TGTTTGGTTCAGGGACTTTTTAGTT 59.282 36.000 0.00 0.00 34.60 2.24
4015 4269 6.127563 TGTTTGGTTCAGGGACTTTTTAGTTC 60.128 38.462 0.00 0.00 34.60 3.01
4016 4270 4.466827 TGGTTCAGGGACTTTTTAGTTCC 58.533 43.478 0.00 0.00 34.60 3.62
4017 4271 4.079672 TGGTTCAGGGACTTTTTAGTTCCA 60.080 41.667 5.47 0.00 39.96 3.53
4018 4272 4.891168 GGTTCAGGGACTTTTTAGTTCCAA 59.109 41.667 5.47 0.00 39.96 3.53
4019 4273 5.361571 GGTTCAGGGACTTTTTAGTTCCAAA 59.638 40.000 5.47 0.00 39.96 3.28
4020 4274 6.461092 GGTTCAGGGACTTTTTAGTTCCAAAG 60.461 42.308 5.47 0.00 39.96 2.77
4021 4275 6.008696 TCAGGGACTTTTTAGTTCCAAAGA 57.991 37.500 5.47 0.00 39.96 2.52
4022 4276 5.826208 TCAGGGACTTTTTAGTTCCAAAGAC 59.174 40.000 5.47 0.00 39.96 3.01
4023 4277 5.828328 CAGGGACTTTTTAGTTCCAAAGACT 59.172 40.000 5.47 0.00 39.96 3.24
4024 4278 6.996282 CAGGGACTTTTTAGTTCCAAAGACTA 59.004 38.462 5.47 0.00 39.96 2.59
4025 4279 7.173390 CAGGGACTTTTTAGTTCCAAAGACTAG 59.827 40.741 5.47 0.00 39.96 2.57
4026 4280 7.072076 AGGGACTTTTTAGTTCCAAAGACTAGA 59.928 37.037 5.47 0.00 39.96 2.43
4027 4281 7.718314 GGGACTTTTTAGTTCCAAAGACTAGAA 59.282 37.037 0.00 0.00 37.41 2.10
4028 4282 9.117183 GGACTTTTTAGTTCCAAAGACTAGAAA 57.883 33.333 0.00 0.00 34.50 2.52
4032 4286 9.797556 TTTTTAGTTCCAAAGACTAGAAAAAGC 57.202 29.630 0.00 0.00 33.44 3.51
4033 4287 7.506328 TTAGTTCCAAAGACTAGAAAAAGCC 57.494 36.000 0.00 0.00 31.74 4.35
4034 4288 4.827835 AGTTCCAAAGACTAGAAAAAGCCC 59.172 41.667 0.00 0.00 0.00 5.19
4035 4289 3.763057 TCCAAAGACTAGAAAAAGCCCC 58.237 45.455 0.00 0.00 0.00 5.80
4036 4290 3.397955 TCCAAAGACTAGAAAAAGCCCCT 59.602 43.478 0.00 0.00 0.00 4.79
4037 4291 4.600111 TCCAAAGACTAGAAAAAGCCCCTA 59.400 41.667 0.00 0.00 0.00 3.53
4038 4292 5.073965 TCCAAAGACTAGAAAAAGCCCCTAA 59.926 40.000 0.00 0.00 0.00 2.69
4039 4293 5.952347 CCAAAGACTAGAAAAAGCCCCTAAT 59.048 40.000 0.00 0.00 0.00 1.73
4040 4294 7.037153 TCCAAAGACTAGAAAAAGCCCCTAATA 60.037 37.037 0.00 0.00 0.00 0.98
4041 4295 7.614192 CCAAAGACTAGAAAAAGCCCCTAATAA 59.386 37.037 0.00 0.00 0.00 1.40
4042 4296 8.678199 CAAAGACTAGAAAAAGCCCCTAATAAG 58.322 37.037 0.00 0.00 0.00 1.73
4043 4297 7.512117 AGACTAGAAAAAGCCCCTAATAAGT 57.488 36.000 0.00 0.00 0.00 2.24
4044 4298 7.566569 AGACTAGAAAAAGCCCCTAATAAGTC 58.433 38.462 0.00 0.00 0.00 3.01
4045 4299 6.660800 ACTAGAAAAAGCCCCTAATAAGTCC 58.339 40.000 0.00 0.00 0.00 3.85
4046 4300 5.798239 AGAAAAAGCCCCTAATAAGTCCT 57.202 39.130 0.00 0.00 0.00 3.85
4047 4301 6.903340 AGAAAAAGCCCCTAATAAGTCCTA 57.097 37.500 0.00 0.00 0.00 2.94
4048 4302 6.901300 AGAAAAAGCCCCTAATAAGTCCTAG 58.099 40.000 0.00 0.00 0.00 3.02
4049 4303 5.648330 AAAAGCCCCTAATAAGTCCTAGG 57.352 43.478 0.82 0.82 35.39 3.02
4050 4304 4.571366 AAGCCCCTAATAAGTCCTAGGA 57.429 45.455 7.62 7.62 37.47 2.94
4051 4305 4.571366 AGCCCCTAATAAGTCCTAGGAA 57.429 45.455 14.65 0.00 37.47 3.36
4052 4306 4.232909 AGCCCCTAATAAGTCCTAGGAAC 58.767 47.826 14.65 8.14 37.47 3.62
4053 4307 3.327172 GCCCCTAATAAGTCCTAGGAACC 59.673 52.174 14.65 1.48 37.47 3.62
4054 4308 4.563782 CCCCTAATAAGTCCTAGGAACCA 58.436 47.826 14.65 1.04 37.47 3.67
4055 4309 4.973211 CCCCTAATAAGTCCTAGGAACCAA 59.027 45.833 14.65 0.00 37.47 3.67
4056 4310 5.430745 CCCCTAATAAGTCCTAGGAACCAAA 59.569 44.000 14.65 0.00 37.47 3.28
4057 4311 6.102762 CCCCTAATAAGTCCTAGGAACCAAAT 59.897 42.308 14.65 1.23 37.47 2.32
4058 4312 6.998673 CCCTAATAAGTCCTAGGAACCAAATG 59.001 42.308 14.65 2.42 37.47 2.32
4059 4313 7.147373 CCCTAATAAGTCCTAGGAACCAAATGA 60.147 40.741 14.65 0.00 37.47 2.57
4060 4314 7.934120 CCTAATAAGTCCTAGGAACCAAATGAG 59.066 40.741 14.65 5.76 37.47 2.90
4061 4315 7.510675 AATAAGTCCTAGGAACCAAATGAGA 57.489 36.000 14.65 0.00 0.00 3.27
4062 4316 5.428184 AAGTCCTAGGAACCAAATGAGAG 57.572 43.478 14.65 0.00 0.00 3.20
4063 4317 3.777522 AGTCCTAGGAACCAAATGAGAGG 59.222 47.826 14.65 0.00 0.00 3.69
4064 4318 3.115390 TCCTAGGAACCAAATGAGAGGG 58.885 50.000 9.71 0.00 0.00 4.30
4065 4319 3.115390 CCTAGGAACCAAATGAGAGGGA 58.885 50.000 1.05 0.00 0.00 4.20
4066 4320 3.118223 CCTAGGAACCAAATGAGAGGGAC 60.118 52.174 1.05 0.00 0.00 4.46
4068 4322 2.989571 AGGAACCAAATGAGAGGGACTT 59.010 45.455 0.00 0.00 41.55 3.01
4069 4323 3.399305 AGGAACCAAATGAGAGGGACTTT 59.601 43.478 0.00 0.00 41.55 2.66
4070 4324 3.507622 GGAACCAAATGAGAGGGACTTTG 59.492 47.826 0.00 0.00 41.55 2.77
4072 4326 2.450476 CCAAATGAGAGGGACTTTGGG 58.550 52.381 5.24 0.00 42.44 4.12
4073 4327 2.041620 CCAAATGAGAGGGACTTTGGGA 59.958 50.000 5.24 0.00 42.44 4.37
4074 4328 3.084786 CAAATGAGAGGGACTTTGGGAC 58.915 50.000 0.00 0.00 41.55 4.46
4075 4329 2.350863 ATGAGAGGGACTTTGGGACT 57.649 50.000 0.00 0.00 41.55 3.85
4076 4330 3.491766 ATGAGAGGGACTTTGGGACTA 57.508 47.619 0.00 0.00 41.55 2.59
4077 4331 2.821437 TGAGAGGGACTTTGGGACTAG 58.179 52.381 0.00 0.00 41.55 2.57
4078 4332 2.382305 TGAGAGGGACTTTGGGACTAGA 59.618 50.000 0.00 0.00 41.55 2.43
4079 4333 3.181410 TGAGAGGGACTTTGGGACTAGAA 60.181 47.826 0.00 0.00 41.55 2.10
4080 4334 3.838903 GAGAGGGACTTTGGGACTAGAAA 59.161 47.826 0.00 0.00 41.55 2.52
4081 4335 4.240323 AGAGGGACTTTGGGACTAGAAAA 58.760 43.478 0.00 0.00 41.55 2.29
4082 4336 4.663592 AGAGGGACTTTGGGACTAGAAAAA 59.336 41.667 0.00 0.00 41.55 1.94
4083 4337 4.986783 AGGGACTTTGGGACTAGAAAAAG 58.013 43.478 0.00 3.49 27.25 2.27
4084 4338 4.663592 AGGGACTTTGGGACTAGAAAAAGA 59.336 41.667 0.00 0.00 27.25 2.52
4085 4339 4.760715 GGGACTTTGGGACTAGAAAAAGAC 59.239 45.833 0.00 1.68 34.47 3.01
4086 4340 5.456330 GGGACTTTGGGACTAGAAAAAGACT 60.456 44.000 0.00 0.00 34.47 3.24
4087 4341 6.062749 GGACTTTGGGACTAGAAAAAGACTT 58.937 40.000 0.00 0.00 34.47 3.01
4088 4342 6.546403 GGACTTTGGGACTAGAAAAAGACTTT 59.454 38.462 0.00 0.00 34.47 2.66
4089 4343 7.718314 GGACTTTGGGACTAGAAAAAGACTTTA 59.282 37.037 0.00 0.00 34.47 1.85
4090 4344 8.447924 ACTTTGGGACTAGAAAAAGACTTTAC 57.552 34.615 0.00 0.00 34.47 2.01
4091 4345 8.272889 ACTTTGGGACTAGAAAAAGACTTTACT 58.727 33.333 0.00 6.80 34.47 2.24
4092 4346 8.446599 TTTGGGACTAGAAAAAGACTTTACTG 57.553 34.615 0.00 3.06 0.00 2.74
4093 4347 7.369551 TGGGACTAGAAAAAGACTTTACTGA 57.630 36.000 0.00 0.00 0.00 3.41
4094 4348 7.798071 TGGGACTAGAAAAAGACTTTACTGAA 58.202 34.615 0.00 0.00 0.00 3.02
4095 4349 8.269317 TGGGACTAGAAAAAGACTTTACTGAAA 58.731 33.333 0.00 0.00 0.00 2.69
4096 4350 9.117183 GGGACTAGAAAAAGACTTTACTGAAAA 57.883 33.333 0.00 0.00 0.00 2.29
4151 4405 4.618920 GTCCTAGGACTTCTGAACCAAA 57.381 45.455 31.12 0.00 41.57 3.28
4152 4406 4.316645 GTCCTAGGACTTCTGAACCAAAC 58.683 47.826 31.12 3.26 41.57 2.93
4153 4407 3.971305 TCCTAGGACTTCTGAACCAAACA 59.029 43.478 7.62 0.00 0.00 2.83
4154 4408 4.065789 CCTAGGACTTCTGAACCAAACAC 58.934 47.826 1.05 0.00 0.00 3.32
4155 4409 2.932261 AGGACTTCTGAACCAAACACC 58.068 47.619 0.58 0.00 0.00 4.16
4156 4410 1.954382 GGACTTCTGAACCAAACACCC 59.046 52.381 0.00 0.00 0.00 4.61
4157 4411 1.954382 GACTTCTGAACCAAACACCCC 59.046 52.381 0.00 0.00 0.00 4.95
4158 4412 1.328279 CTTCTGAACCAAACACCCCC 58.672 55.000 0.00 0.00 0.00 5.40
4159 4413 0.930726 TTCTGAACCAAACACCCCCT 59.069 50.000 0.00 0.00 0.00 4.79
4160 4414 0.184933 TCTGAACCAAACACCCCCTG 59.815 55.000 0.00 0.00 0.00 4.45
4161 4415 0.184933 CTGAACCAAACACCCCCTGA 59.815 55.000 0.00 0.00 0.00 3.86
4165 4419 0.251165 ACCAAACACCCCCTGAATCG 60.251 55.000 0.00 0.00 0.00 3.34
4195 4454 2.738846 CACAGAAGAGAATGTCGTTGGG 59.261 50.000 0.00 0.00 0.00 4.12
4280 4772 2.611292 GGAATTGAATGCCTCTCGTCTG 59.389 50.000 0.00 0.00 0.00 3.51
4328 4820 4.092383 GTGATGCCTTTCATTCATTGCAAC 59.908 41.667 0.00 0.00 35.05 4.17
4354 4846 6.701432 CAGAAAGTGCCTTGAATTCAATTC 57.299 37.500 20.76 18.39 39.70 2.17
4355 4847 6.453092 CAGAAAGTGCCTTGAATTCAATTCT 58.547 36.000 20.76 20.07 39.96 2.40
4356 4848 6.927381 CAGAAAGTGCCTTGAATTCAATTCTT 59.073 34.615 20.76 17.25 39.96 2.52
4357 4849 7.115947 CAGAAAGTGCCTTGAATTCAATTCTTC 59.884 37.037 20.76 15.72 39.96 2.87
4358 4850 6.409524 AAGTGCCTTGAATTCAATTCTTCA 57.590 33.333 20.76 11.31 39.96 3.02
4359 4851 6.600882 AGTGCCTTGAATTCAATTCTTCAT 57.399 33.333 20.76 2.58 39.96 2.57
4360 4852 6.628185 AGTGCCTTGAATTCAATTCTTCATC 58.372 36.000 20.76 7.13 39.96 2.92
4361 4853 5.514204 GTGCCTTGAATTCAATTCTTCATCG 59.486 40.000 20.76 6.35 39.96 3.84
4362 4854 4.501921 GCCTTGAATTCAATTCTTCATCGC 59.498 41.667 20.76 8.04 39.96 4.58
4363 4855 5.039333 CCTTGAATTCAATTCTTCATCGCC 58.961 41.667 20.76 0.00 39.96 5.54
4364 4856 4.637483 TGAATTCAATTCTTCATCGCCC 57.363 40.909 11.46 0.00 39.96 6.13
4365 4857 3.381272 TGAATTCAATTCTTCATCGCCCC 59.619 43.478 11.46 0.00 39.96 5.80
4366 4858 1.762708 TTCAATTCTTCATCGCCCCC 58.237 50.000 0.00 0.00 0.00 5.40
4367 4859 0.463654 TCAATTCTTCATCGCCCCCG 60.464 55.000 0.00 0.00 0.00 5.73
4385 4877 2.105323 CGAAATGCGGAAATGGCTAC 57.895 50.000 0.00 0.00 36.03 3.58
4386 4878 1.670811 CGAAATGCGGAAATGGCTACT 59.329 47.619 0.00 0.00 36.03 2.57
4387 4879 2.869801 CGAAATGCGGAAATGGCTACTA 59.130 45.455 0.00 0.00 36.03 1.82
4388 4880 3.303132 CGAAATGCGGAAATGGCTACTAC 60.303 47.826 0.00 0.00 36.03 2.73
4389 4881 3.560636 AATGCGGAAATGGCTACTACT 57.439 42.857 0.00 0.00 0.00 2.57
4390 4882 2.309528 TGCGGAAATGGCTACTACTG 57.690 50.000 0.00 0.00 0.00 2.74
4391 4883 1.553248 TGCGGAAATGGCTACTACTGT 59.447 47.619 0.00 0.00 0.00 3.55
4392 4884 2.761767 TGCGGAAATGGCTACTACTGTA 59.238 45.455 0.00 0.00 0.00 2.74
4393 4885 3.181479 TGCGGAAATGGCTACTACTGTAG 60.181 47.826 13.13 13.13 46.59 2.74
4402 4894 3.166489 CTACTACTGTAGCCACCTTGC 57.834 52.381 14.55 0.00 39.56 4.01
4403 4895 0.246635 ACTACTGTAGCCACCTTGCG 59.753 55.000 14.55 0.00 36.02 4.85
4404 4896 0.460284 CTACTGTAGCCACCTTGCGG 60.460 60.000 1.26 0.00 36.02 5.69
4406 4898 1.302511 CTGTAGCCACCTTGCGGTT 60.303 57.895 0.00 0.00 42.13 4.44
4407 4899 1.577328 CTGTAGCCACCTTGCGGTTG 61.577 60.000 0.00 0.00 42.13 3.77
4421 4913 4.043200 GTTGCCGCCTTGCCTGAC 62.043 66.667 0.00 0.00 0.00 3.51
4422 4914 4.269523 TTGCCGCCTTGCCTGACT 62.270 61.111 0.00 0.00 0.00 3.41
4423 4915 3.790416 TTGCCGCCTTGCCTGACTT 62.790 57.895 0.00 0.00 0.00 3.01
4424 4916 3.741476 GCCGCCTTGCCTGACTTG 61.741 66.667 0.00 0.00 0.00 3.16
4425 4917 3.741476 CCGCCTTGCCTGACTTGC 61.741 66.667 0.00 0.00 0.00 4.01
4426 4918 4.093952 CGCCTTGCCTGACTTGCG 62.094 66.667 0.00 0.00 35.81 4.85
4427 4919 2.669569 GCCTTGCCTGACTTGCGA 60.670 61.111 0.00 0.00 0.00 5.10
4428 4920 2.684843 GCCTTGCCTGACTTGCGAG 61.685 63.158 0.00 0.00 39.51 5.03
4429 4921 3.571119 CTTGCCTGACTTGCGAGG 58.429 61.111 5.79 0.00 36.72 4.63
4430 4922 1.302033 CTTGCCTGACTTGCGAGGT 60.302 57.895 5.79 0.00 36.72 3.85
4431 4923 0.886490 CTTGCCTGACTTGCGAGGTT 60.886 55.000 5.79 0.00 36.72 3.50
4432 4924 1.165907 TTGCCTGACTTGCGAGGTTG 61.166 55.000 5.79 0.00 0.00 3.77
4433 4925 2.970974 GCCTGACTTGCGAGGTTGC 61.971 63.158 5.79 0.00 0.00 4.17
4434 4926 2.671177 CCTGACTTGCGAGGTTGCG 61.671 63.158 5.79 0.00 37.81 4.85
4435 4927 1.664649 CTGACTTGCGAGGTTGCGA 60.665 57.895 5.79 0.00 37.81 5.10
4436 4928 1.891060 CTGACTTGCGAGGTTGCGAC 61.891 60.000 5.79 0.00 37.81 5.19
4437 4929 2.665185 ACTTGCGAGGTTGCGACC 60.665 61.111 16.08 16.08 46.92 4.79
4455 4947 2.058675 CGAAGGGGGAGACTTGTGT 58.941 57.895 0.00 0.00 0.00 3.72
4456 4948 0.320771 CGAAGGGGGAGACTTGTGTG 60.321 60.000 0.00 0.00 0.00 3.82
4457 4949 1.056660 GAAGGGGGAGACTTGTGTGA 58.943 55.000 0.00 0.00 0.00 3.58
4458 4950 1.002544 GAAGGGGGAGACTTGTGTGAG 59.997 57.143 0.00 0.00 0.00 3.51
4459 4951 0.191064 AGGGGGAGACTTGTGTGAGA 59.809 55.000 0.00 0.00 0.00 3.27
4460 4952 1.203364 AGGGGGAGACTTGTGTGAGAT 60.203 52.381 0.00 0.00 0.00 2.75
4461 4953 1.208293 GGGGGAGACTTGTGTGAGATC 59.792 57.143 0.00 0.00 0.00 2.75
4462 4954 2.183679 GGGGAGACTTGTGTGAGATCT 58.816 52.381 0.00 0.00 0.00 2.75
4463 4955 3.366396 GGGGAGACTTGTGTGAGATCTA 58.634 50.000 0.00 0.00 0.00 1.98
4464 4956 3.964031 GGGGAGACTTGTGTGAGATCTAT 59.036 47.826 0.00 0.00 0.00 1.98
4465 4957 4.202202 GGGGAGACTTGTGTGAGATCTATG 60.202 50.000 0.00 0.00 0.00 2.23
4466 4958 4.646945 GGGAGACTTGTGTGAGATCTATGA 59.353 45.833 0.00 0.00 0.00 2.15
4467 4959 5.221224 GGGAGACTTGTGTGAGATCTATGAG 60.221 48.000 0.00 0.00 0.00 2.90
4468 4960 5.592282 GGAGACTTGTGTGAGATCTATGAGA 59.408 44.000 0.00 0.00 0.00 3.27
4469 4961 6.265196 GGAGACTTGTGTGAGATCTATGAGAT 59.735 42.308 0.00 0.00 37.73 2.75
4501 4993 9.609950 TTTTTGAAAAGAAAAACATGCTCAAAG 57.390 25.926 0.00 0.00 34.20 2.77
4502 4994 8.545229 TTTGAAAAGAAAAACATGCTCAAAGA 57.455 26.923 0.00 0.00 30.38 2.52
4503 4995 8.721019 TTGAAAAGAAAAACATGCTCAAAGAT 57.279 26.923 0.00 0.00 0.00 2.40
4504 4996 8.721019 TGAAAAGAAAAACATGCTCAAAGATT 57.279 26.923 0.00 0.00 0.00 2.40
4505 4997 8.819974 TGAAAAGAAAAACATGCTCAAAGATTC 58.180 29.630 0.00 0.00 0.00 2.52
4506 4998 8.953368 AAAAGAAAAACATGCTCAAAGATTCT 57.047 26.923 0.00 0.00 0.00 2.40
4507 4999 7.941795 AAGAAAAACATGCTCAAAGATTCTG 57.058 32.000 0.00 0.00 0.00 3.02
4508 5000 7.281040 AGAAAAACATGCTCAAAGATTCTGA 57.719 32.000 0.00 0.00 0.00 3.27
4509 5001 7.719483 AGAAAAACATGCTCAAAGATTCTGAA 58.281 30.769 0.00 0.00 0.00 3.02
4510 5002 8.199449 AGAAAAACATGCTCAAAGATTCTGAAA 58.801 29.630 0.00 0.00 0.00 2.69
4511 5003 8.721019 AAAAACATGCTCAAAGATTCTGAAAA 57.279 26.923 0.00 0.00 0.00 2.29
4512 5004 8.721019 AAAACATGCTCAAAGATTCTGAAAAA 57.279 26.923 0.00 0.00 0.00 1.94
4513 5005 8.897872 AAACATGCTCAAAGATTCTGAAAAAT 57.102 26.923 0.00 0.00 0.00 1.82
4514 5006 8.897872 AACATGCTCAAAGATTCTGAAAAATT 57.102 26.923 0.00 0.00 0.00 1.82
4515 5007 8.306680 ACATGCTCAAAGATTCTGAAAAATTG 57.693 30.769 0.00 0.61 0.00 2.32
4516 5008 7.929785 ACATGCTCAAAGATTCTGAAAAATTGT 59.070 29.630 0.00 0.00 0.00 2.71
4517 5009 7.703298 TGCTCAAAGATTCTGAAAAATTGTG 57.297 32.000 0.00 2.89 0.00 3.33
4518 5010 7.267128 TGCTCAAAGATTCTGAAAAATTGTGT 58.733 30.769 0.00 0.00 0.00 3.72
4519 5011 8.412456 TGCTCAAAGATTCTGAAAAATTGTGTA 58.588 29.630 0.00 0.00 0.00 2.90
4520 5012 8.909671 GCTCAAAGATTCTGAAAAATTGTGTAG 58.090 33.333 0.00 0.00 0.00 2.74
4522 5014 9.950680 TCAAAGATTCTGAAAAATTGTGTAGAC 57.049 29.630 0.00 0.00 0.00 2.59
4523 5015 9.734620 CAAAGATTCTGAAAAATTGTGTAGACA 57.265 29.630 0.00 0.00 0.00 3.41
4524 5016 9.736023 AAAGATTCTGAAAAATTGTGTAGACAC 57.264 29.630 5.83 5.83 46.59 3.67
4549 5041 6.852858 TCAACGTTTGATGTACAATCTCAA 57.147 33.333 0.00 2.66 38.36 3.02
4550 5042 7.252965 TCAACGTTTGATGTACAATCTCAAA 57.747 32.000 15.75 15.75 38.36 2.69
4551 5043 7.698628 TCAACGTTTGATGTACAATCTCAAAA 58.301 30.769 19.57 6.29 39.74 2.44
4552 5044 8.184848 TCAACGTTTGATGTACAATCTCAAAAA 58.815 29.630 19.57 2.43 39.74 1.94
4574 5066 7.588497 AAAAGTTTCAGCTCCTAATTCAACT 57.412 32.000 0.00 0.00 0.00 3.16
4575 5067 7.588497 AAAGTTTCAGCTCCTAATTCAACTT 57.412 32.000 0.00 0.00 35.29 2.66
4576 5068 8.691661 AAAGTTTCAGCTCCTAATTCAACTTA 57.308 30.769 0.00 0.00 33.21 2.24
4577 5069 7.674471 AGTTTCAGCTCCTAATTCAACTTAC 57.326 36.000 0.00 0.00 0.00 2.34
4578 5070 7.224297 AGTTTCAGCTCCTAATTCAACTTACA 58.776 34.615 0.00 0.00 0.00 2.41
4579 5071 7.885399 AGTTTCAGCTCCTAATTCAACTTACAT 59.115 33.333 0.00 0.00 0.00 2.29
4580 5072 8.515414 GTTTCAGCTCCTAATTCAACTTACATT 58.485 33.333 0.00 0.00 0.00 2.71
4581 5073 9.733556 TTTCAGCTCCTAATTCAACTTACATTA 57.266 29.630 0.00 0.00 0.00 1.90
4582 5074 9.733556 TTCAGCTCCTAATTCAACTTACATTAA 57.266 29.630 0.00 0.00 0.00 1.40
4583 5075 9.905713 TCAGCTCCTAATTCAACTTACATTAAT 57.094 29.630 0.00 0.00 0.00 1.40
4584 5076 9.941664 CAGCTCCTAATTCAACTTACATTAATG 57.058 33.333 14.01 14.01 0.00 1.90
4585 5077 9.125026 AGCTCCTAATTCAACTTACATTAATGG 57.875 33.333 19.37 4.67 0.00 3.16
4586 5078 9.120538 GCTCCTAATTCAACTTACATTAATGGA 57.879 33.333 19.37 8.49 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.748729 TGCCCACGAACGTTTTTCCT 60.749 50.000 0.46 0.00 0.00 3.36
1 2 0.317519 CTGCCCACGAACGTTTTTCC 60.318 55.000 0.46 0.00 0.00 3.13
2 3 0.379316 ACTGCCCACGAACGTTTTTC 59.621 50.000 0.46 0.00 0.00 2.29
5 6 1.223187 CTTACTGCCCACGAACGTTT 58.777 50.000 0.46 0.00 0.00 3.60
6 7 0.105408 ACTTACTGCCCACGAACGTT 59.895 50.000 0.00 0.00 0.00 3.99
7 8 0.105408 AACTTACTGCCCACGAACGT 59.895 50.000 0.00 0.00 0.00 3.99
8 9 0.511221 CAACTTACTGCCCACGAACG 59.489 55.000 0.00 0.00 0.00 3.95
13 14 2.561478 TCTTCCAACTTACTGCCCAC 57.439 50.000 0.00 0.00 0.00 4.61
17 18 7.849804 TCATCTATTTCTTCCAACTTACTGC 57.150 36.000 0.00 0.00 0.00 4.40
19 20 8.049117 TGCATCATCTATTTCTTCCAACTTACT 58.951 33.333 0.00 0.00 0.00 2.24
25 26 7.776500 TCATTCTGCATCATCTATTTCTTCCAA 59.224 33.333 0.00 0.00 0.00 3.53
26 27 7.284820 TCATTCTGCATCATCTATTTCTTCCA 58.715 34.615 0.00 0.00 0.00 3.53
96 97 3.874392 AAAGGAAAAAGGATGCGATGG 57.126 42.857 0.00 0.00 0.00 3.51
101 102 7.561021 TTTTTGGTAAAAGGAAAAAGGATGC 57.439 32.000 0.00 0.00 0.00 3.91
106 107 8.009409 GCGATGATTTTTGGTAAAAGGAAAAAG 58.991 33.333 0.00 0.00 36.73 2.27
112 113 6.034898 GTGATGCGATGATTTTTGGTAAAAGG 59.965 38.462 0.00 0.00 36.73 3.11
113 114 6.808212 AGTGATGCGATGATTTTTGGTAAAAG 59.192 34.615 0.00 0.00 36.73 2.27
117 118 5.295787 GGTAGTGATGCGATGATTTTTGGTA 59.704 40.000 0.00 0.00 0.00 3.25
126 127 2.422276 CATCGGTAGTGATGCGATGA 57.578 50.000 0.14 0.00 39.33 2.92
142 143 3.111098 CGCAAGAAGCTTTTATGGCATC 58.889 45.455 1.65 0.00 42.61 3.91
157 158 5.525745 TGTTGACTGAACTTAAATCGCAAGA 59.474 36.000 0.00 0.00 43.01 3.02
170 171 7.328249 TGAAATCTTGTGTTTTGTTGACTGAAC 59.672 33.333 0.00 0.00 34.84 3.18
173 174 6.585702 TGTGAAATCTTGTGTTTTGTTGACTG 59.414 34.615 0.00 0.00 0.00 3.51
175 176 6.942886 TGTGAAATCTTGTGTTTTGTTGAC 57.057 33.333 0.00 0.00 0.00 3.18
192 193 5.428184 AAACACCCCTTTGATTTGTGAAA 57.572 34.783 0.00 0.00 0.00 2.69
197 198 5.757808 CAGGTTAAAACACCCCTTTGATTTG 59.242 40.000 0.00 0.00 37.58 2.32
206 207 3.451540 TGGTTTTCAGGTTAAAACACCCC 59.548 43.478 12.64 0.00 46.48 4.95
243 244 4.386711 AGGCTTAGTTTGTGTGTTCCTAC 58.613 43.478 0.00 0.00 0.00 3.18
257 258 7.974730 ACTAACCATCTAAACTAGGCTTAGT 57.025 36.000 2.03 2.03 41.91 2.24
262 263 8.563123 AAGAAAACTAACCATCTAAACTAGGC 57.437 34.615 0.00 0.00 0.00 3.93
281 282 5.245075 GTGGGTTGGTTCCATCATAAGAAAA 59.755 40.000 0.00 0.00 36.58 2.29
284 285 3.308832 GGTGGGTTGGTTCCATCATAAGA 60.309 47.826 0.00 0.00 35.54 2.10
288 289 1.005924 GAGGTGGGTTGGTTCCATCAT 59.994 52.381 0.00 0.00 37.85 2.45
291 292 1.378762 CGAGGTGGGTTGGTTCCAT 59.621 57.895 0.00 0.00 36.58 3.41
294 295 2.833957 ACCGAGGTGGGTTGGTTC 59.166 61.111 0.00 0.00 44.64 3.62
308 309 1.717645 CCAAGTTTACGACTCGAACCG 59.282 52.381 5.20 4.79 37.72 4.44
317 318 2.129607 GAGAACGTGCCAAGTTTACGA 58.870 47.619 10.09 0.00 40.01 3.43
319 320 2.572173 CGAGAACGTGCCAAGTTTAC 57.428 50.000 0.00 0.00 34.56 2.01
337 338 3.301579 CGTACGATATGGTGCTTTTCACG 60.302 47.826 10.44 0.00 46.56 4.35
348 349 2.502213 TTCAGCACCGTACGATATGG 57.498 50.000 18.76 1.31 40.77 2.74
352 353 2.665649 TTGATTCAGCACCGTACGAT 57.334 45.000 18.76 0.00 0.00 3.73
360 361 9.202273 TGTATTTAAAACCATTTGATTCAGCAC 57.798 29.630 0.00 0.00 0.00 4.40
399 400 2.683968 TCAAAAGCTTAGACGCGATGT 58.316 42.857 15.93 0.00 34.40 3.06
404 405 8.947940 CAATATGTTTATCAAAAGCTTAGACGC 58.052 33.333 0.00 0.00 0.00 5.19
409 410 9.929722 CGTAGCAATATGTTTATCAAAAGCTTA 57.070 29.630 0.00 0.00 0.00 3.09
412 413 7.696453 ACACGTAGCAATATGTTTATCAAAAGC 59.304 33.333 0.00 0.00 0.00 3.51
416 417 8.813282 CACTACACGTAGCAATATGTTTATCAA 58.187 33.333 4.10 0.00 36.66 2.57
421 422 5.484715 ACCACTACACGTAGCAATATGTTT 58.515 37.500 4.10 0.00 36.66 2.83
424 425 6.270815 AGTAACCACTACACGTAGCAATATG 58.729 40.000 4.10 0.00 36.66 1.78
426 427 5.902613 AGTAACCACTACACGTAGCAATA 57.097 39.130 4.10 0.00 36.66 1.90
432 433 6.806249 CCGATTTAAAGTAACCACTACACGTA 59.194 38.462 0.00 0.00 33.48 3.57
434 435 5.445010 GCCGATTTAAAGTAACCACTACACG 60.445 44.000 0.00 0.00 33.48 4.49
436 437 4.626604 CGCCGATTTAAAGTAACCACTACA 59.373 41.667 0.00 0.00 33.48 2.74
438 439 4.183101 CCGCCGATTTAAAGTAACCACTA 58.817 43.478 0.00 0.00 33.48 2.74
441 442 3.056588 ACCGCCGATTTAAAGTAACCA 57.943 42.857 0.00 0.00 0.00 3.67
540 541 2.758327 CCTCGACCACATCCGGGA 60.758 66.667 0.00 0.00 0.00 5.14
545 546 2.635229 ATCAGCGCCTCGACCACATC 62.635 60.000 2.29 0.00 0.00 3.06
546 547 2.244117 AATCAGCGCCTCGACCACAT 62.244 55.000 2.29 0.00 0.00 3.21
547 548 2.449031 AAATCAGCGCCTCGACCACA 62.449 55.000 2.29 0.00 0.00 4.17
548 549 1.696832 GAAATCAGCGCCTCGACCAC 61.697 60.000 2.29 0.00 0.00 4.16
549 550 1.447838 GAAATCAGCGCCTCGACCA 60.448 57.895 2.29 0.00 0.00 4.02
551 552 0.796312 TTTGAAATCAGCGCCTCGAC 59.204 50.000 2.29 0.00 0.00 4.20
553 554 1.078709 TCTTTGAAATCAGCGCCTCG 58.921 50.000 2.29 0.00 0.00 4.63
574 575 1.889170 CTGCCTGGAAAAACCCTTCTC 59.111 52.381 0.00 0.00 38.00 2.87
588 590 2.416747 TGAACATCGACTTTCTGCCTG 58.583 47.619 8.80 0.00 0.00 4.85
591 593 3.494626 TGAGTTGAACATCGACTTTCTGC 59.505 43.478 0.00 3.10 41.04 4.26
592 594 5.657470 TTGAGTTGAACATCGACTTTCTG 57.343 39.130 0.00 0.00 41.04 3.02
635 638 7.491682 AGTTGTACAAAAGTCTGCATCAAATT 58.508 30.769 10.51 0.00 0.00 1.82
653 656 8.225777 CCGTGGAGTTTTTATTTAGAGTTGTAC 58.774 37.037 0.00 0.00 0.00 2.90
654 657 7.388500 CCCGTGGAGTTTTTATTTAGAGTTGTA 59.612 37.037 0.00 0.00 0.00 2.41
655 658 6.206048 CCCGTGGAGTTTTTATTTAGAGTTGT 59.794 38.462 0.00 0.00 0.00 3.32
656 659 6.349033 CCCCGTGGAGTTTTTATTTAGAGTTG 60.349 42.308 0.00 0.00 0.00 3.16
788 803 0.109272 GCTCACGTGTCAGAATCCGA 60.109 55.000 16.51 0.00 0.00 4.55
813 828 3.984749 GCGAGGCGGGAGAGATCC 61.985 72.222 0.00 0.00 0.00 3.36
853 868 4.785453 GCCACGCTTCAGGGGGAG 62.785 72.222 0.00 0.00 34.56 4.30
871 892 3.596066 CTGGGAGTGGTCGCCAGTG 62.596 68.421 10.41 0.00 37.30 3.66
936 973 2.276309 GACCAATGGAGGCAGGGAGG 62.276 65.000 6.16 0.00 0.00 4.30
937 974 1.225704 GACCAATGGAGGCAGGGAG 59.774 63.158 6.16 0.00 0.00 4.30
938 975 2.669133 CGACCAATGGAGGCAGGGA 61.669 63.158 6.16 0.00 0.00 4.20
939 976 2.124570 CGACCAATGGAGGCAGGG 60.125 66.667 6.16 0.00 0.00 4.45
940 977 2.825836 GCGACCAATGGAGGCAGG 60.826 66.667 6.16 0.00 0.00 4.85
941 978 2.825836 GGCGACCAATGGAGGCAG 60.826 66.667 6.16 0.00 32.47 4.85
942 979 4.776322 CGGCGACCAATGGAGGCA 62.776 66.667 20.35 0.00 32.47 4.75
959 996 0.802607 CTCTTTGTCTAGCCGACGCC 60.803 60.000 0.00 0.00 45.87 5.68
974 1011 0.335361 TAAGCCGACCTCTCCCTCTT 59.665 55.000 0.00 0.00 0.00 2.85
975 1012 0.335361 TTAAGCCGACCTCTCCCTCT 59.665 55.000 0.00 0.00 0.00 3.69
1042 1092 1.040339 ACGAGGAGGAGGATGACAGC 61.040 60.000 0.00 0.00 0.00 4.40
1044 1094 0.748367 CGACGAGGAGGAGGATGACA 60.748 60.000 0.00 0.00 0.00 3.58
1104 1154 2.606519 TACACGGAGCTGCCCCTT 60.607 61.111 0.00 0.00 0.00 3.95
1168 1218 0.107017 AAATCGGCTGACCTGGGATG 60.107 55.000 0.00 0.00 0.00 3.51
1379 1432 6.768029 GCAATAGCTCTCTGAGTTTCTATG 57.232 41.667 4.32 1.04 37.91 2.23
1398 1451 1.604593 GACACAGCCCCACAGCAAT 60.605 57.895 0.00 0.00 34.23 3.56
1410 1464 2.304180 AGAACCCCAGAATCAGACACAG 59.696 50.000 0.00 0.00 0.00 3.66
1414 1468 2.093235 CAGGAGAACCCCAGAATCAGAC 60.093 54.545 0.00 0.00 36.73 3.51
1427 1481 1.813178 GGCCTAAACAAGCAGGAGAAC 59.187 52.381 0.00 0.00 33.42 3.01
1489 1543 3.036783 GCTGAGCTTGCTCTTGCCG 62.037 63.158 21.17 7.74 38.71 5.69
1552 1606 0.037975 AGCTGAAAAGCAAATGGCCG 60.038 50.000 0.00 0.00 46.50 6.13
1612 1666 5.585445 AGATGAAACATGCAAGAGAGATGAC 59.415 40.000 0.00 0.00 0.00 3.06
1813 1867 6.527057 AATACCTGAACTGTACTGTACTCC 57.473 41.667 17.98 6.14 0.00 3.85
1814 1868 8.305317 AGAAAATACCTGAACTGTACTGTACTC 58.695 37.037 17.98 8.74 0.00 2.59
1869 1937 5.009631 TCCTACAAGTTTGGACATGATTGG 58.990 41.667 0.00 0.00 0.00 3.16
2034 2102 9.258826 TCAAACTCAAATACAATTCACAAATGG 57.741 29.630 0.00 0.00 0.00 3.16
2083 2151 2.027561 CCGTTGGACTGGATTCTAACCA 60.028 50.000 0.00 0.00 34.38 3.67
2466 2545 3.354948 TGTGGACATGATCAAAGAGGG 57.645 47.619 0.00 0.00 0.00 4.30
2603 2733 5.783111 ACATTCAAAGTCCAAACTAATGCC 58.217 37.500 0.00 0.00 34.45 4.40
2677 2807 9.956720 GAATATATAAACAGAAGTGCAGCAAAT 57.043 29.630 0.00 0.00 0.00 2.32
2678 2808 8.405531 GGAATATATAAACAGAAGTGCAGCAAA 58.594 33.333 0.00 0.00 0.00 3.68
2832 2963 1.621317 TGCGGTTCATACTTCTCACCA 59.379 47.619 0.00 0.00 0.00 4.17
2916 3047 2.863740 TGCAACGTCTGTCAAGTACAAG 59.136 45.455 0.00 0.00 37.74 3.16
3052 3183 0.657840 CGGTGCTAATGGCTACTTGC 59.342 55.000 0.00 0.00 42.39 4.01
3079 3210 6.535150 TCATCGCAAAAATAGAAGTACAGGAG 59.465 38.462 0.00 0.00 0.00 3.69
3080 3211 6.312918 GTCATCGCAAAAATAGAAGTACAGGA 59.687 38.462 0.00 0.00 0.00 3.86
3081 3212 6.313905 AGTCATCGCAAAAATAGAAGTACAGG 59.686 38.462 0.00 0.00 0.00 4.00
3082 3213 7.295952 AGTCATCGCAAAAATAGAAGTACAG 57.704 36.000 0.00 0.00 0.00 2.74
3083 3214 6.312918 GGAGTCATCGCAAAAATAGAAGTACA 59.687 38.462 0.00 0.00 0.00 2.90
3084 3215 6.535508 AGGAGTCATCGCAAAAATAGAAGTAC 59.464 38.462 0.00 0.00 0.00 2.73
3085 3216 6.535150 CAGGAGTCATCGCAAAAATAGAAGTA 59.465 38.462 0.00 0.00 0.00 2.24
3086 3217 5.352569 CAGGAGTCATCGCAAAAATAGAAGT 59.647 40.000 0.00 0.00 0.00 3.01
3090 3221 5.812642 AGTACAGGAGTCATCGCAAAAATAG 59.187 40.000 0.00 0.00 0.00 1.73
3124 3263 7.719483 CCTGTTTGACAAATGAATAGGCATAT 58.281 34.615 3.49 0.00 0.00 1.78
3223 3362 2.325484 AGGACCGCCAAAAAGGAAAAT 58.675 42.857 0.00 0.00 41.22 1.82
3257 3396 5.183140 AGAAATGTTTCGGGTGTCTAATTGG 59.817 40.000 0.24 0.00 41.92 3.16
3258 3397 6.254281 AGAAATGTTTCGGGTGTCTAATTG 57.746 37.500 0.24 0.00 41.92 2.32
3362 3501 4.477975 GGGTCTGTCTCCGCGTCG 62.478 72.222 4.92 0.00 0.00 5.12
3368 3507 3.053849 GCTCGACGGGTCTGTCTCC 62.054 68.421 8.13 0.00 36.71 3.71
3539 3678 1.087771 CCATGTACGCCGGGTTCTTC 61.088 60.000 2.18 0.00 0.00 2.87
3757 3896 1.004745 ACATTGGTAGCCAGGAACCAG 59.995 52.381 12.62 6.65 46.11 4.00
3774 3913 9.533253 GCCTAGCACAAATCAATAAATAAACAT 57.467 29.630 0.00 0.00 0.00 2.71
3812 4016 4.394729 TGGACCAACTCTAACAATCAACC 58.605 43.478 0.00 0.00 0.00 3.77
3841 4045 1.336240 GGCACCACAAGCTCATGAAAC 60.336 52.381 0.00 0.00 0.00 2.78
3862 4066 4.062991 CCTACAGTCTACCCACACAAAAC 58.937 47.826 0.00 0.00 0.00 2.43
3867 4071 1.823610 GTCCCTACAGTCTACCCACAC 59.176 57.143 0.00 0.00 0.00 3.82
3868 4072 1.714787 AGTCCCTACAGTCTACCCACA 59.285 52.381 0.00 0.00 0.00 4.17
3869 4073 2.100989 CAGTCCCTACAGTCTACCCAC 58.899 57.143 0.00 0.00 0.00 4.61
3870 4074 1.714787 ACAGTCCCTACAGTCTACCCA 59.285 52.381 0.00 0.00 0.00 4.51
3871 4075 2.528673 ACAGTCCCTACAGTCTACCC 57.471 55.000 0.00 0.00 0.00 3.69
3872 4076 5.447757 AGATTACAGTCCCTACAGTCTACC 58.552 45.833 0.00 0.00 0.00 3.18
3920 4127 6.965500 GCGTGTTCGTGCTACATATATATACT 59.035 38.462 0.00 0.00 39.49 2.12
3938 4145 1.880027 AGTCAAATTCAGGGCGTGTTC 59.120 47.619 7.12 0.00 0.00 3.18
3965 4219 3.617263 CCCTCAGTTCGTTGTAATAGTGC 59.383 47.826 0.00 0.00 0.00 4.40
3966 4220 5.068234 TCCCTCAGTTCGTTGTAATAGTG 57.932 43.478 0.00 0.00 0.00 2.74
3974 4228 2.240493 AACACTCCCTCAGTTCGTTG 57.760 50.000 0.00 0.00 30.26 4.10
3985 4239 0.476771 TCCCTGAACCAAACACTCCC 59.523 55.000 0.00 0.00 0.00 4.30
3986 4240 1.143073 AGTCCCTGAACCAAACACTCC 59.857 52.381 0.00 0.00 0.00 3.85
3987 4241 2.640316 AGTCCCTGAACCAAACACTC 57.360 50.000 0.00 0.00 0.00 3.51
3988 4242 3.382083 AAAGTCCCTGAACCAAACACT 57.618 42.857 0.00 0.00 0.00 3.55
3989 4243 4.465632 AAAAAGTCCCTGAACCAAACAC 57.534 40.909 0.00 0.00 0.00 3.32
3990 4244 5.265989 ACTAAAAAGTCCCTGAACCAAACA 58.734 37.500 0.00 0.00 0.00 2.83
3991 4245 5.847111 ACTAAAAAGTCCCTGAACCAAAC 57.153 39.130 0.00 0.00 0.00 2.93
3992 4246 5.361571 GGAACTAAAAAGTCCCTGAACCAAA 59.638 40.000 0.00 0.00 0.00 3.28
3993 4247 4.891168 GGAACTAAAAAGTCCCTGAACCAA 59.109 41.667 0.00 0.00 0.00 3.67
3994 4248 4.079672 TGGAACTAAAAAGTCCCTGAACCA 60.080 41.667 0.00 0.00 0.00 3.67
3995 4249 4.466827 TGGAACTAAAAAGTCCCTGAACC 58.533 43.478 0.00 0.00 0.00 3.62
3996 4250 6.320418 TCTTTGGAACTAAAAAGTCCCTGAAC 59.680 38.462 0.00 0.00 35.38 3.18
3997 4251 6.320418 GTCTTTGGAACTAAAAAGTCCCTGAA 59.680 38.462 0.00 0.00 35.38 3.02
3998 4252 5.826208 GTCTTTGGAACTAAAAAGTCCCTGA 59.174 40.000 0.00 0.00 35.38 3.86
3999 4253 5.828328 AGTCTTTGGAACTAAAAAGTCCCTG 59.172 40.000 0.00 0.00 35.38 4.45
4000 4254 6.014771 AGTCTTTGGAACTAAAAAGTCCCT 57.985 37.500 0.00 0.00 35.38 4.20
4001 4255 7.222161 TCTAGTCTTTGGAACTAAAAAGTCCC 58.778 38.462 0.00 0.00 35.38 4.46
4002 4256 8.672823 TTCTAGTCTTTGGAACTAAAAAGTCC 57.327 34.615 0.00 0.00 35.38 3.85
4006 4260 9.797556 GCTTTTTCTAGTCTTTGGAACTAAAAA 57.202 29.630 0.00 0.00 0.00 1.94
4007 4261 8.410912 GGCTTTTTCTAGTCTTTGGAACTAAAA 58.589 33.333 0.00 0.00 0.00 1.52
4008 4262 7.013942 GGGCTTTTTCTAGTCTTTGGAACTAAA 59.986 37.037 0.00 0.00 0.00 1.85
4009 4263 6.489022 GGGCTTTTTCTAGTCTTTGGAACTAA 59.511 38.462 0.00 0.00 0.00 2.24
4010 4264 6.002082 GGGCTTTTTCTAGTCTTTGGAACTA 58.998 40.000 0.00 0.00 0.00 2.24
4011 4265 4.827835 GGGCTTTTTCTAGTCTTTGGAACT 59.172 41.667 0.00 0.00 0.00 3.01
4012 4266 4.022242 GGGGCTTTTTCTAGTCTTTGGAAC 60.022 45.833 0.00 0.00 0.00 3.62
4013 4267 4.141018 AGGGGCTTTTTCTAGTCTTTGGAA 60.141 41.667 0.00 0.00 0.00 3.53
4014 4268 3.397955 AGGGGCTTTTTCTAGTCTTTGGA 59.602 43.478 0.00 0.00 0.00 3.53
4015 4269 3.767711 AGGGGCTTTTTCTAGTCTTTGG 58.232 45.455 0.00 0.00 0.00 3.28
4016 4270 8.575649 TTATTAGGGGCTTTTTCTAGTCTTTG 57.424 34.615 0.00 0.00 0.00 2.77
4017 4271 8.391699 ACTTATTAGGGGCTTTTTCTAGTCTTT 58.608 33.333 0.00 0.00 0.00 2.52
4018 4272 7.929959 ACTTATTAGGGGCTTTTTCTAGTCTT 58.070 34.615 0.00 0.00 0.00 3.01
4019 4273 7.365742 GGACTTATTAGGGGCTTTTTCTAGTCT 60.366 40.741 0.00 0.00 0.00 3.24
4020 4274 6.766944 GGACTTATTAGGGGCTTTTTCTAGTC 59.233 42.308 0.00 0.00 0.00 2.59
4021 4275 6.447409 AGGACTTATTAGGGGCTTTTTCTAGT 59.553 38.462 0.00 0.00 0.00 2.57
4022 4276 6.901300 AGGACTTATTAGGGGCTTTTTCTAG 58.099 40.000 0.00 0.00 0.00 2.43
4023 4277 6.903340 AGGACTTATTAGGGGCTTTTTCTA 57.097 37.500 0.00 0.00 0.00 2.10
4024 4278 5.798239 AGGACTTATTAGGGGCTTTTTCT 57.202 39.130 0.00 0.00 0.00 2.52
4025 4279 6.062749 CCTAGGACTTATTAGGGGCTTTTTC 58.937 44.000 1.05 0.00 34.13 2.29
4026 4280 5.734634 TCCTAGGACTTATTAGGGGCTTTTT 59.265 40.000 7.62 0.00 37.59 1.94
4027 4281 5.294473 TCCTAGGACTTATTAGGGGCTTTT 58.706 41.667 7.62 0.00 37.59 2.27
4028 4282 4.904373 TCCTAGGACTTATTAGGGGCTTT 58.096 43.478 7.62 0.00 37.59 3.51
4029 4283 4.571366 TCCTAGGACTTATTAGGGGCTT 57.429 45.455 7.62 0.00 37.59 4.35
4030 4284 4.232909 GTTCCTAGGACTTATTAGGGGCT 58.767 47.826 12.22 0.00 37.59 5.19
4031 4285 3.327172 GGTTCCTAGGACTTATTAGGGGC 59.673 52.174 12.22 0.00 37.59 5.80
4032 4286 4.563782 TGGTTCCTAGGACTTATTAGGGG 58.436 47.826 12.22 0.00 37.59 4.79
4033 4287 6.570654 TTTGGTTCCTAGGACTTATTAGGG 57.429 41.667 12.22 0.00 37.59 3.53
4034 4288 7.802117 TCATTTGGTTCCTAGGACTTATTAGG 58.198 38.462 12.22 0.00 38.22 2.69
4035 4289 8.705594 TCTCATTTGGTTCCTAGGACTTATTAG 58.294 37.037 12.22 3.12 0.00 1.73
4036 4290 8.618240 TCTCATTTGGTTCCTAGGACTTATTA 57.382 34.615 12.22 0.00 0.00 0.98
4037 4291 7.366011 CCTCTCATTTGGTTCCTAGGACTTATT 60.366 40.741 12.22 0.00 0.00 1.40
4038 4292 6.100424 CCTCTCATTTGGTTCCTAGGACTTAT 59.900 42.308 12.22 0.00 0.00 1.73
4039 4293 5.425539 CCTCTCATTTGGTTCCTAGGACTTA 59.574 44.000 12.22 0.00 0.00 2.24
4040 4294 4.226168 CCTCTCATTTGGTTCCTAGGACTT 59.774 45.833 12.22 0.00 0.00 3.01
4041 4295 3.777522 CCTCTCATTTGGTTCCTAGGACT 59.222 47.826 12.22 0.00 0.00 3.85
4042 4296 3.118223 CCCTCTCATTTGGTTCCTAGGAC 60.118 52.174 12.22 6.89 0.00 3.85
4043 4297 3.115390 CCCTCTCATTTGGTTCCTAGGA 58.885 50.000 7.62 7.62 0.00 2.94
4044 4298 3.115390 TCCCTCTCATTTGGTTCCTAGG 58.885 50.000 0.82 0.82 0.00 3.02
4045 4299 3.777522 AGTCCCTCTCATTTGGTTCCTAG 59.222 47.826 0.00 0.00 0.00 3.02
4046 4300 3.803340 AGTCCCTCTCATTTGGTTCCTA 58.197 45.455 0.00 0.00 0.00 2.94
4047 4301 2.637165 AGTCCCTCTCATTTGGTTCCT 58.363 47.619 0.00 0.00 0.00 3.36
4048 4302 3.441500 AAGTCCCTCTCATTTGGTTCC 57.558 47.619 0.00 0.00 0.00 3.62
4049 4303 3.507622 CCAAAGTCCCTCTCATTTGGTTC 59.492 47.826 7.26 0.00 44.28 3.62
4050 4304 3.500343 CCAAAGTCCCTCTCATTTGGTT 58.500 45.455 7.26 0.00 44.28 3.67
4051 4305 2.225117 CCCAAAGTCCCTCTCATTTGGT 60.225 50.000 12.97 0.00 46.67 3.67
4053 4307 3.084786 GTCCCAAAGTCCCTCTCATTTG 58.915 50.000 0.00 0.00 33.45 2.32
4054 4308 2.989571 AGTCCCAAAGTCCCTCTCATTT 59.010 45.455 0.00 0.00 0.00 2.32
4055 4309 2.637165 AGTCCCAAAGTCCCTCTCATT 58.363 47.619 0.00 0.00 0.00 2.57
4056 4310 2.350863 AGTCCCAAAGTCCCTCTCAT 57.649 50.000 0.00 0.00 0.00 2.90
4057 4311 2.382305 TCTAGTCCCAAAGTCCCTCTCA 59.618 50.000 0.00 0.00 0.00 3.27
4058 4312 3.103080 TCTAGTCCCAAAGTCCCTCTC 57.897 52.381 0.00 0.00 0.00 3.20
4059 4313 3.562108 TTCTAGTCCCAAAGTCCCTCT 57.438 47.619 0.00 0.00 0.00 3.69
4060 4314 4.635699 TTTTCTAGTCCCAAAGTCCCTC 57.364 45.455 0.00 0.00 0.00 4.30
4061 4315 4.663592 TCTTTTTCTAGTCCCAAAGTCCCT 59.336 41.667 0.00 0.00 0.00 4.20
4062 4316 4.760715 GTCTTTTTCTAGTCCCAAAGTCCC 59.239 45.833 0.00 0.00 0.00 4.46
4063 4317 5.622180 AGTCTTTTTCTAGTCCCAAAGTCC 58.378 41.667 0.00 0.00 0.00 3.85
4064 4318 7.569639 AAAGTCTTTTTCTAGTCCCAAAGTC 57.430 36.000 0.00 0.00 0.00 3.01
4065 4319 8.272889 AGTAAAGTCTTTTTCTAGTCCCAAAGT 58.727 33.333 2.51 0.00 0.00 2.66
4066 4320 8.560374 CAGTAAAGTCTTTTTCTAGTCCCAAAG 58.440 37.037 2.51 0.00 0.00 2.77
4067 4321 8.269317 TCAGTAAAGTCTTTTTCTAGTCCCAAA 58.731 33.333 2.51 0.00 0.00 3.28
4068 4322 7.798071 TCAGTAAAGTCTTTTTCTAGTCCCAA 58.202 34.615 2.51 0.00 0.00 4.12
4069 4323 7.369551 TCAGTAAAGTCTTTTTCTAGTCCCA 57.630 36.000 2.51 0.00 0.00 4.37
4070 4324 8.672823 TTTCAGTAAAGTCTTTTTCTAGTCCC 57.327 34.615 2.51 0.00 0.00 4.46
4130 4384 4.202326 TGTTTGGTTCAGAAGTCCTAGGAC 60.202 45.833 31.29 31.29 44.86 3.85
4131 4385 3.971305 TGTTTGGTTCAGAAGTCCTAGGA 59.029 43.478 7.62 7.62 0.00 2.94
4132 4386 4.065789 GTGTTTGGTTCAGAAGTCCTAGG 58.934 47.826 0.82 0.82 0.00 3.02
4133 4387 4.065789 GGTGTTTGGTTCAGAAGTCCTAG 58.934 47.826 0.00 0.00 0.00 3.02
4134 4388 3.181448 GGGTGTTTGGTTCAGAAGTCCTA 60.181 47.826 0.00 0.00 0.00 2.94
4135 4389 2.422945 GGGTGTTTGGTTCAGAAGTCCT 60.423 50.000 0.00 0.00 0.00 3.85
4136 4390 1.954382 GGGTGTTTGGTTCAGAAGTCC 59.046 52.381 0.00 0.00 0.00 3.85
4137 4391 1.954382 GGGGTGTTTGGTTCAGAAGTC 59.046 52.381 0.00 0.00 0.00 3.01
4138 4392 1.411074 GGGGGTGTTTGGTTCAGAAGT 60.411 52.381 0.00 0.00 0.00 3.01
4139 4393 1.133482 AGGGGGTGTTTGGTTCAGAAG 60.133 52.381 0.00 0.00 0.00 2.85
4140 4394 0.930726 AGGGGGTGTTTGGTTCAGAA 59.069 50.000 0.00 0.00 0.00 3.02
4141 4395 0.184933 CAGGGGGTGTTTGGTTCAGA 59.815 55.000 0.00 0.00 0.00 3.27
4142 4396 0.184933 TCAGGGGGTGTTTGGTTCAG 59.815 55.000 0.00 0.00 0.00 3.02
4143 4397 0.631753 TTCAGGGGGTGTTTGGTTCA 59.368 50.000 0.00 0.00 0.00 3.18
4144 4398 1.893137 GATTCAGGGGGTGTTTGGTTC 59.107 52.381 0.00 0.00 0.00 3.62
4145 4399 1.821666 CGATTCAGGGGGTGTTTGGTT 60.822 52.381 0.00 0.00 0.00 3.67
4146 4400 0.251165 CGATTCAGGGGGTGTTTGGT 60.251 55.000 0.00 0.00 0.00 3.67
4147 4401 0.251165 ACGATTCAGGGGGTGTTTGG 60.251 55.000 0.00 0.00 0.00 3.28
4148 4402 1.539827 GAACGATTCAGGGGGTGTTTG 59.460 52.381 0.00 0.00 0.00 2.93
4149 4403 1.144093 TGAACGATTCAGGGGGTGTTT 59.856 47.619 0.00 0.00 34.08 2.83
4150 4404 0.768622 TGAACGATTCAGGGGGTGTT 59.231 50.000 0.00 0.00 34.08 3.32
4151 4405 0.991920 ATGAACGATTCAGGGGGTGT 59.008 50.000 0.00 0.00 43.98 4.16
4152 4406 1.340017 ACATGAACGATTCAGGGGGTG 60.340 52.381 0.00 6.90 45.11 4.61
4153 4407 0.991920 ACATGAACGATTCAGGGGGT 59.008 50.000 0.00 5.12 45.11 4.95
4154 4408 1.382522 CACATGAACGATTCAGGGGG 58.617 55.000 0.00 4.59 45.11 5.40
4155 4409 0.734889 GCACATGAACGATTCAGGGG 59.265 55.000 0.00 11.72 46.90 4.79
4156 4410 1.131126 GTGCACATGAACGATTCAGGG 59.869 52.381 13.17 8.18 45.11 4.45
4157 4411 1.805943 TGTGCACATGAACGATTCAGG 59.194 47.619 17.42 9.69 46.17 3.86
4158 4412 2.738314 TCTGTGCACATGAACGATTCAG 59.262 45.455 22.00 3.85 43.98 3.02
4159 4413 2.765122 TCTGTGCACATGAACGATTCA 58.235 42.857 22.00 0.00 45.01 2.57
4160 4414 3.433274 TCTTCTGTGCACATGAACGATTC 59.567 43.478 22.00 0.00 0.00 2.52
4161 4415 3.402110 TCTTCTGTGCACATGAACGATT 58.598 40.909 22.00 0.00 0.00 3.34
4165 4419 4.214971 ACATTCTCTTCTGTGCACATGAAC 59.785 41.667 22.00 0.00 0.00 3.18
4280 4772 0.755686 AGCAATCCCTCTCGTGATCC 59.244 55.000 0.00 0.00 0.00 3.36
4338 4830 5.643664 CGATGAAGAATTGAATTCAAGGCA 58.356 37.500 24.17 16.74 41.71 4.75
4339 4831 4.501921 GCGATGAAGAATTGAATTCAAGGC 59.498 41.667 24.17 17.93 41.71 4.35
4340 4832 5.039333 GGCGATGAAGAATTGAATTCAAGG 58.961 41.667 24.17 7.52 41.71 3.61
4341 4833 5.039333 GGGCGATGAAGAATTGAATTCAAG 58.961 41.667 24.17 9.85 41.71 3.02
4343 4835 3.381272 GGGGCGATGAAGAATTGAATTCA 59.619 43.478 19.02 3.38 41.71 2.57
4344 4836 3.243535 GGGGGCGATGAAGAATTGAATTC 60.244 47.826 9.82 9.82 39.56 2.17
4345 4837 2.695147 GGGGGCGATGAAGAATTGAATT 59.305 45.455 0.00 0.00 0.00 2.17
4346 4838 2.310538 GGGGGCGATGAAGAATTGAAT 58.689 47.619 0.00 0.00 0.00 2.57
4347 4839 1.762708 GGGGGCGATGAAGAATTGAA 58.237 50.000 0.00 0.00 0.00 2.69
4348 4840 0.463654 CGGGGGCGATGAAGAATTGA 60.464 55.000 0.00 0.00 0.00 2.57
4349 4841 0.463654 TCGGGGGCGATGAAGAATTG 60.464 55.000 0.00 0.00 0.00 2.32
4350 4842 0.254747 TTCGGGGGCGATGAAGAATT 59.745 50.000 0.00 0.00 0.00 2.17
4351 4843 0.254747 TTTCGGGGGCGATGAAGAAT 59.745 50.000 0.00 0.00 0.00 2.40
4352 4844 0.254747 ATTTCGGGGGCGATGAAGAA 59.745 50.000 0.00 0.00 0.00 2.52
4353 4845 0.463654 CATTTCGGGGGCGATGAAGA 60.464 55.000 0.00 0.00 0.00 2.87
4354 4846 2.024918 CATTTCGGGGGCGATGAAG 58.975 57.895 0.00 0.00 0.00 3.02
4355 4847 2.118404 GCATTTCGGGGGCGATGAA 61.118 57.895 0.00 0.00 0.00 2.57
4356 4848 2.515991 GCATTTCGGGGGCGATGA 60.516 61.111 0.00 0.00 0.00 2.92
4366 4858 1.670811 AGTAGCCATTTCCGCATTTCG 59.329 47.619 0.00 0.00 38.08 3.46
4367 4859 3.877508 AGTAGTAGCCATTTCCGCATTTC 59.122 43.478 0.00 0.00 0.00 2.17
4368 4860 3.627577 CAGTAGTAGCCATTTCCGCATTT 59.372 43.478 0.00 0.00 0.00 2.32
4369 4861 3.206150 CAGTAGTAGCCATTTCCGCATT 58.794 45.455 0.00 0.00 0.00 3.56
4370 4862 2.170607 ACAGTAGTAGCCATTTCCGCAT 59.829 45.455 0.00 0.00 0.00 4.73
4371 4863 1.553248 ACAGTAGTAGCCATTTCCGCA 59.447 47.619 0.00 0.00 0.00 5.69
4372 4864 2.311124 ACAGTAGTAGCCATTTCCGC 57.689 50.000 0.00 0.00 0.00 5.54
4383 4875 1.475280 CGCAAGGTGGCTACAGTAGTA 59.525 52.381 9.42 0.00 0.00 1.82
4384 4876 0.246635 CGCAAGGTGGCTACAGTAGT 59.753 55.000 9.42 0.00 0.00 2.73
4385 4877 3.050703 CGCAAGGTGGCTACAGTAG 57.949 57.895 1.52 2.85 0.00 2.57
4404 4896 4.043200 GTCAGGCAAGGCGGCAAC 62.043 66.667 13.08 0.00 44.47 4.17
4405 4897 3.790416 AAGTCAGGCAAGGCGGCAA 62.790 57.895 13.08 0.00 44.47 4.52
4406 4898 4.269523 AAGTCAGGCAAGGCGGCA 62.270 61.111 13.08 0.00 44.47 5.69
4407 4899 3.741476 CAAGTCAGGCAAGGCGGC 61.741 66.667 0.00 0.00 41.61 6.53
4408 4900 3.741476 GCAAGTCAGGCAAGGCGG 61.741 66.667 0.00 0.00 0.00 6.13
4409 4901 4.093952 CGCAAGTCAGGCAAGGCG 62.094 66.667 0.00 0.00 38.45 5.52
4410 4902 2.669569 TCGCAAGTCAGGCAAGGC 60.670 61.111 0.00 0.00 39.48 4.35
4411 4903 2.037136 CCTCGCAAGTCAGGCAAGG 61.037 63.158 0.00 0.00 39.48 3.61
4412 4904 0.886490 AACCTCGCAAGTCAGGCAAG 60.886 55.000 0.00 0.00 39.48 4.01
4413 4905 1.148273 AACCTCGCAAGTCAGGCAA 59.852 52.632 0.00 0.00 39.48 4.52
4414 4906 1.597854 CAACCTCGCAAGTCAGGCA 60.598 57.895 0.00 0.00 39.48 4.75
4415 4907 2.970974 GCAACCTCGCAAGTCAGGC 61.971 63.158 0.00 0.00 39.48 4.85
4416 4908 2.671177 CGCAACCTCGCAAGTCAGG 61.671 63.158 0.00 0.00 39.48 3.86
4417 4909 1.664649 TCGCAACCTCGCAAGTCAG 60.665 57.895 0.00 0.00 39.48 3.51
4418 4910 1.954146 GTCGCAACCTCGCAAGTCA 60.954 57.895 0.00 0.00 39.48 3.41
4419 4911 2.668280 GGTCGCAACCTCGCAAGTC 61.668 63.158 0.00 0.00 42.80 3.01
4420 4912 2.665185 GGTCGCAACCTCGCAAGT 60.665 61.111 0.00 0.00 42.80 3.16
4421 4913 3.777925 CGGTCGCAACCTCGCAAG 61.778 66.667 0.00 0.00 44.04 4.01
4422 4914 3.793775 TTCGGTCGCAACCTCGCAA 62.794 57.895 0.00 0.00 44.04 4.85
4423 4915 4.287781 TTCGGTCGCAACCTCGCA 62.288 61.111 0.00 0.00 44.04 5.10
4424 4916 3.479269 CTTCGGTCGCAACCTCGC 61.479 66.667 0.00 0.00 44.04 5.03
4425 4917 2.809601 CCTTCGGTCGCAACCTCG 60.810 66.667 0.00 0.00 44.04 4.63
4426 4918 2.434359 CCCTTCGGTCGCAACCTC 60.434 66.667 0.00 0.00 44.04 3.85
4427 4919 4.016706 CCCCTTCGGTCGCAACCT 62.017 66.667 0.00 0.00 44.04 3.50
4429 4921 3.952628 CTCCCCCTTCGGTCGCAAC 62.953 68.421 0.00 0.00 0.00 4.17
4430 4922 3.702048 CTCCCCCTTCGGTCGCAA 61.702 66.667 0.00 0.00 0.00 4.85
4431 4923 4.689549 TCTCCCCCTTCGGTCGCA 62.690 66.667 0.00 0.00 0.00 5.10
4432 4924 4.144703 GTCTCCCCCTTCGGTCGC 62.145 72.222 0.00 0.00 0.00 5.19
4433 4925 1.982938 AAGTCTCCCCCTTCGGTCG 60.983 63.158 0.00 0.00 0.00 4.79
4434 4926 1.192803 ACAAGTCTCCCCCTTCGGTC 61.193 60.000 0.00 0.00 0.00 4.79
4435 4927 1.152096 ACAAGTCTCCCCCTTCGGT 60.152 57.895 0.00 0.00 0.00 4.69
4436 4928 1.296715 CACAAGTCTCCCCCTTCGG 59.703 63.158 0.00 0.00 0.00 4.30
4437 4929 0.320771 CACACAAGTCTCCCCCTTCG 60.321 60.000 0.00 0.00 0.00 3.79
4438 4930 1.002544 CTCACACAAGTCTCCCCCTTC 59.997 57.143 0.00 0.00 0.00 3.46
4439 4931 1.059913 CTCACACAAGTCTCCCCCTT 58.940 55.000 0.00 0.00 0.00 3.95
4440 4932 0.191064 TCTCACACAAGTCTCCCCCT 59.809 55.000 0.00 0.00 0.00 4.79
4441 4933 1.208293 GATCTCACACAAGTCTCCCCC 59.792 57.143 0.00 0.00 0.00 5.40
4442 4934 2.183679 AGATCTCACACAAGTCTCCCC 58.816 52.381 0.00 0.00 0.00 4.81
4443 4935 4.646945 TCATAGATCTCACACAAGTCTCCC 59.353 45.833 0.00 0.00 0.00 4.30
4444 4936 5.592282 TCTCATAGATCTCACACAAGTCTCC 59.408 44.000 0.00 0.00 0.00 3.71
4445 4937 6.691754 TCTCATAGATCTCACACAAGTCTC 57.308 41.667 0.00 0.00 0.00 3.36
4446 4938 6.017192 CGATCTCATAGATCTCACACAAGTCT 60.017 42.308 13.49 0.00 46.83 3.24
4447 4939 6.017523 TCGATCTCATAGATCTCACACAAGTC 60.018 42.308 13.49 0.00 46.83 3.01
4448 4940 5.825151 TCGATCTCATAGATCTCACACAAGT 59.175 40.000 13.49 0.00 46.83 3.16
4449 4941 6.311055 TCGATCTCATAGATCTCACACAAG 57.689 41.667 13.49 0.00 46.83 3.16
4450 4942 6.890979 ATCGATCTCATAGATCTCACACAA 57.109 37.500 13.49 0.00 46.83 3.33
4451 4943 6.890979 AATCGATCTCATAGATCTCACACA 57.109 37.500 13.49 0.00 46.83 3.72
4452 4944 8.586570 AAAAATCGATCTCATAGATCTCACAC 57.413 34.615 13.49 0.00 46.83 3.82
4475 4967 9.609950 CTTTGAGCATGTTTTTCTTTTCAAAAA 57.390 25.926 0.00 0.00 34.20 1.94
4476 4968 8.997323 TCTTTGAGCATGTTTTTCTTTTCAAAA 58.003 25.926 0.00 0.00 34.20 2.44
4477 4969 8.545229 TCTTTGAGCATGTTTTTCTTTTCAAA 57.455 26.923 0.00 0.00 33.70 2.69
4478 4970 8.721019 ATCTTTGAGCATGTTTTTCTTTTCAA 57.279 26.923 0.00 0.00 0.00 2.69
4479 4971 8.721019 AATCTTTGAGCATGTTTTTCTTTTCA 57.279 26.923 0.00 0.00 0.00 2.69
4480 4972 9.038803 AGAATCTTTGAGCATGTTTTTCTTTTC 57.961 29.630 0.00 0.00 0.00 2.29
4481 4973 8.823818 CAGAATCTTTGAGCATGTTTTTCTTTT 58.176 29.630 0.00 0.00 0.00 2.27
4482 4974 8.199449 TCAGAATCTTTGAGCATGTTTTTCTTT 58.801 29.630 0.00 0.00 0.00 2.52
4483 4975 7.719483 TCAGAATCTTTGAGCATGTTTTTCTT 58.281 30.769 0.00 0.00 0.00 2.52
4484 4976 7.281040 TCAGAATCTTTGAGCATGTTTTTCT 57.719 32.000 0.00 0.00 0.00 2.52
4485 4977 7.935338 TTCAGAATCTTTGAGCATGTTTTTC 57.065 32.000 0.00 0.00 0.00 2.29
4486 4978 8.721019 TTTTCAGAATCTTTGAGCATGTTTTT 57.279 26.923 0.00 0.00 0.00 1.94
4487 4979 8.721019 TTTTTCAGAATCTTTGAGCATGTTTT 57.279 26.923 0.00 0.00 0.00 2.43
4488 4980 8.897872 ATTTTTCAGAATCTTTGAGCATGTTT 57.102 26.923 0.00 0.00 0.00 2.83
4489 4981 8.770828 CAATTTTTCAGAATCTTTGAGCATGTT 58.229 29.630 0.00 0.00 0.00 2.71
4490 4982 7.929785 ACAATTTTTCAGAATCTTTGAGCATGT 59.070 29.630 0.00 0.00 0.00 3.21
4491 4983 8.221100 CACAATTTTTCAGAATCTTTGAGCATG 58.779 33.333 0.00 0.00 0.00 4.06
4492 4984 7.929785 ACACAATTTTTCAGAATCTTTGAGCAT 59.070 29.630 0.00 0.00 0.00 3.79
4493 4985 7.267128 ACACAATTTTTCAGAATCTTTGAGCA 58.733 30.769 0.00 0.00 0.00 4.26
4494 4986 7.704789 ACACAATTTTTCAGAATCTTTGAGC 57.295 32.000 0.00 0.00 0.00 4.26
4496 4988 9.950680 GTCTACACAATTTTTCAGAATCTTTGA 57.049 29.630 0.00 0.00 0.00 2.69
4497 4989 9.734620 TGTCTACACAATTTTTCAGAATCTTTG 57.265 29.630 0.00 0.00 0.00 2.77
4498 4990 9.736023 GTGTCTACACAATTTTTCAGAATCTTT 57.264 29.630 8.35 0.00 45.75 2.52
4526 5018 6.852858 TTGAGATTGTACATCAAACGTTGA 57.147 33.333 0.00 1.91 45.01 3.18
4527 5019 7.906611 TTTTGAGATTGTACATCAAACGTTG 57.093 32.000 18.27 0.00 41.33 4.10
4549 5041 8.011844 AGTTGAATTAGGAGCTGAAACTTTTT 57.988 30.769 0.00 0.00 0.00 1.94
4550 5042 7.588497 AGTTGAATTAGGAGCTGAAACTTTT 57.412 32.000 0.00 0.00 0.00 2.27
4551 5043 7.588497 AAGTTGAATTAGGAGCTGAAACTTT 57.412 32.000 0.00 0.00 33.97 2.66
4552 5044 7.719633 TGTAAGTTGAATTAGGAGCTGAAACTT 59.280 33.333 0.00 0.00 39.31 2.66
4553 5045 7.224297 TGTAAGTTGAATTAGGAGCTGAAACT 58.776 34.615 0.00 0.00 0.00 2.66
4554 5046 7.435068 TGTAAGTTGAATTAGGAGCTGAAAC 57.565 36.000 0.00 0.00 0.00 2.78
4555 5047 8.635765 AATGTAAGTTGAATTAGGAGCTGAAA 57.364 30.769 0.00 0.00 0.00 2.69
4556 5048 9.733556 TTAATGTAAGTTGAATTAGGAGCTGAA 57.266 29.630 0.00 0.00 0.00 3.02
4557 5049 9.905713 ATTAATGTAAGTTGAATTAGGAGCTGA 57.094 29.630 0.00 0.00 0.00 4.26
4558 5050 9.941664 CATTAATGTAAGTTGAATTAGGAGCTG 57.058 33.333 7.32 0.00 0.00 4.24
4559 5051 9.125026 CCATTAATGTAAGTTGAATTAGGAGCT 57.875 33.333 14.25 0.00 0.00 4.09
4560 5052 9.120538 TCCATTAATGTAAGTTGAATTAGGAGC 57.879 33.333 14.25 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.