>input_sequence_30203
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-----------------------------------------------------------------------------ATG
GCGCGGGCTC------------CCCTTCCTGGCCCCGCTCTGTCCCTCCTCGCTGTCATCCTCCTCCTCGTCGGCCGCCG
CGGCGCTGCCGGGGGCGGCGGCGGAGGCGGAGGAAGGGGCAGCTCCGTGTACCCGGCCCCCGTCGTCTACCCGCACCACT
CCAGGCAGATCTCCTGGCATCCCAGGTCAGCCGATTTTT-CC--ACCGCCCCTGCGCTCGCCTTGCTTCATCTCGCCTCC
GATCTCGATTTGGGCGGGGTCGTCCAACCAGACGGCTGATACGTGCTTGATGGCCTGCGCAGGGCCTTCCTCTACCCGCA
CTTCCTCACCGACGACGAGGCCAACCACCTCGTCTCCCTCGTCAGTGCTTCTCCCGCTGCTCCCAGTCCCCCATAGAAAC
TCAGAGAGCTATTGCTGTG-GGGCTGTGTCTGATTCTGGGGTTCTCCTGCTTGTTTAGGCCAGGGCGGAGCTCAAGAGGT
CGGCGGTCGCCGATGACACGTCCGGCAAGAGCAAGCTCAGCGAGGTCCGCACCAGCTCCGGCACCTTCATCGGCAAGGGC
CAGGTCGGCCATTTGCTTTTCAGCTCATAGGCATTATATCTTAGAAAAGAAAATTCCATGGATTGGTCATCTCTCTTGCA
TGTTTCATCTGAAATTTGAGCTCAGCATCTTATGTAGTACTACAATTTTCATGTTCCATAGCAATTACTCATATGTCATA
TGTACTCTCTTATAGGGCACTGTCTATATATGTACTCTTCATGTTCTTTTATTTCTCAAGGGAACAATATCTTGTTTATT
TAGTGACTAGCCATAGCTGGGGTCCAGGAGTACA------------GTACAGTTCAGGTATTTTCTTCTGATGATCAATT
TTTTCATCCG--ATGACCAATCATGTCCAAACTTGTAGGATCCAATTGTTGCTGGTATAGAGGATAAAATTGCCGCATGG
ACATTTCTTCCAAAAGGTTGTGAGACAATAACATTGCACTTTTCTATTCATGCATTTCGGGGGTGCTTATTATTGCAGTT
TGTAGAGAATAAAAATATGTTCCATTTGTGAATTGTATTTGAGTTTGATAGGGGAAGAACTTTTTTTAGCTGGTTAGAAT
CCAGTCCAACGGACCTAACCAAACTGTGGACAGATCTTCATAGAAACATAAAAAATG--TCCAAAAGAGGTAGAACTTTT
GCCTTTCCATCAAGTTAGGAAAGGAGTTCTCTAAAAAAGTTGAGAAAAGAGTATGAAGTACAAATTCACTTCACACGGAG
ATACAAGTGCATCTAGCAGCTCAAGGTGTAGAAAAAGAGCTAAAACATCATACTGT----CCTAGTTACCCTACG-----
ACATTGTACTAGTTGGCCAAATTCTATGCTCAAACTACCACAACATGTCACACACTATGTTCATCATTTCCATTTGTTTT
CCTAATTGTATTTTGTGCTTTGCACAAGTTTTCAATGCAAAGGGTTAAGAGCCATGGTGTTTTACCCTCTTTGATCATGT
CCACATTTGACTTGAGAACCTGTAGAACAGCTACGTGTTTTTACTTGGACATATCATGTATCTGTTGTGGTGTCAAACAC
TCAAACCCAATGCACTACAACACC---------------------------------------------------TTTTG
CTGTTGAGCATTGGCATTAGTTTGGACTTTGAATGTCATGTCATAAAAATCCTGGGCTTGATAAAGAGGATTTTTCAGGG
TTATTTATTTGCTGCACTTCTGTTTATATATTCCAATTTTATGTGTATGGTAGAAAGTTGAACTTCAA-GGGTCTGAGAG
TCTTACTGTTTTCAGTTTTGCTTATAAGTGTTATAAAATGACCAGAGAACGGCGAAGATATGCAAGTTCTAAGATATAAG
CGTGGTGAGAAGTATGAACCGCACCATGATTTCTTCACCGACAGTGTTAACACTATCCGTGGTGGACATCGTGTAGCTAC
TGTACTCTTGTACTTGACAGACGTTGCAGAAGGAGGGGAAACGGTTTTCCCCTTAGCCAAGGTAAATTTTCTTTCTTCAC
AGTGGTGGTGCTCAATAAGATAGAAAATGTGTCAGATTGCTGATTTTTCGTCTGAGCCAGTCGCAAGTAGCCATTAGCAC
CGTAGTGTTCTCCTGTACTTCTATTTTTG--------CGATGACTCCTGTACTTATTCCTAGATATGCCTATTCATTTGT
CAAACAGGCACGTAAAGGATCACACCATAAAGATTTGTCAGAATGTGCACAGAAAGGACTTGCAGGTATAATTTTCGTGC
TATTTTCCTTTTTGGCGGTCCTAATTCCCGAGTTACCAATTAGACACCCGAAACATTTCTTGACTGACATGCACCTGTAT
CCATCGTTCCTTAGTGAAACCACGAAAAGGGGACGCCCTTCTGTTCTTCAACCTTCGCCCCGACGCGGAGACAGACCCGT
CGAGCCTCCATGGCGGATGCGAGGTCATCAAGGGGGAGAAATGGTCTGCCACGAAATGGATCCGCGTGGCCTCGTTTGAC
AAGGTCTATCACATGCCAGGCAACTGCACCGACAACAGCAACAGCTGCTCGCAGTGGGCGGCGCTGGGAGAGTGCACGAA
GAACCCGGCGTACATGGTGGGAACCGCGGCGCTGCCCGGTCACTGTAGAAGGAGCTGCAACGTGTGTTAG----------
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---------------------------------------------------------------
>chr1A_1_TraesCS1A01G305900
AGGAAAAACGTTCGTGGGCAGTAAGTTGGAAGAAATAGATGATGCAGAATGATAAAATGATTTGAGTTCAGAAATATTAT
ATCCACAATTTGTGTTCCATCGCATCCTTTTTCCTTTTACCAAAAATCATCGCATCACTACCGATGCCATAAAAGCTTCT
TGCGATTTAAGTTCAGTCAACAAAACACAAGATTTCACAAATCAAAGGGGTGTTTTAACCTGAAAACCAGGTCCACAAGT
AGTGTAGGAACACACAAACTAAGCCTAGTTTAGATGGTTAGTTTTCTTATGATGGAACCAACCCACCTCGGTTCGAGTCG
TAAACTTGGCACGTTCTCGTGAAAAGCACCATATCGTACGGTGCTGAATCAAATGGTTTTAAATACAAATTCTGAATAGA
CATCGCGTCTAAGCTTTTGATAAACATATTGCTACGTGTAGTGGTTACTTTAAATCGGCGGTTATGGCCGCGACGGCGGT
GTCCGGTGCTCTCACCACGTCGTCGACCCCGACTTTCAAGCACAATTATTTCATCAAGCGTCCCGGATGTGGTCGAGGCG
CTGATTTCAAAGATGAGAAGGGTTTTT-CCAGGCAGAAAGTCGATGTTCAACTCAAAGCTACCACTATAATATC-AAAAT
TTGATGCAGACTTTTGTACAACTCTAAATAAAAACTCCACGGGGCCAGTGGAACACGACATCTCTGTGC-----------
-GCACGTTTGGCGGTCGGTGCCCCCCATGATTTCGCCGGGCGTGCGCGCACGTTTCTTCGCTGCGTGACGGCCGTTGGAT
CGTCGGATTCTGACACGTGAGCGGCGCGGATCTCTCCCGCCTCGCAGCCCAGTCCCCCACTCCCTCCCTCCCCCTGAA--
----GCGTGGCCACTGGCGACCACTCCCAGGCTCCACCTCGCCGCCACCGCCGCCGT----------------CGCCGCG
GCGTCTTCTCCGCCTCCCTGCCTCCATTGGTCGCCGGCGTCGGCTAGACAAAGAGGGAGAG-GTCGGCTTAACTGCGATG
GCGCGGGCTC------------CCCTTCCTGGCCCCGCTCTGTCCCTCCTCGCTGTCATCCTCCTCCTCGTCGGCCGCCG
CGGCGCTGCCGGGGGCGGCGGCGGAGGCGGAGGAAGGGGCAGCTCCGTGTACCCGGCCCCCGTCGTCTACCCGCACCACT
CCAGGCAGATCTCCTGGCATCCCAGGTCAGCCGATTTTT-CC--ACCGCCCCTGCGCTCGCCTTGCTTCATCTCGCCTCC
GATCTCGATTTGGGCGGGGTCGTCCAACCAGACGGCTGATACGTGCTTGATGGCCTGCGCAGGGCCTTCCTCTACCCGCA
CTTCCTCACCGACGACGAGGCCAACCACCTCGTCTCCCTCGTCAGTGCTTCTCCCGCTGCTCCCAGTCCCCCATAGAAAC
TCAGAGAGCTATTGCTGTG-GGGCTGTGTCTGATTCTGGGGTTCTCCTGCTTGTTTAGGCCAGGGCGGAGCTCAAGAGGT
CGGCGGTCGCCGATGACACGTCCGGCAAGAGCAAGCTCAGCGAGGTCCGCACCAGCTCCGGCACCTTCATCGGCAAGGGC
CAGGTCGGCCATTTGCTTTTCAGCTCATAGGCATTATATCTTAGAAAAGAAAATTCCATGGATTGGTCATCTCTCTTGCA
TGTTTCATCTGAAATTTGAGCTCAGCATCTTATGTAGTACTACAATTTTCATGTTCCATAGCAATTACTCATATGTCATA
TGTACTCTCTTATAGGGCACTGTCTATATATGTACTCTTCATGTTCTTTTATTTCTCAAGGGAACAATATCTTGTTTATT
TAGTGACTAGCCATAGCTGGGGTCCAGGAGTACA------------GTACAGTTCAGGTATTTTCTTCTGATGATCAATT
TTTTCATCCG--ATGACCAATCATGTCCAAACTTGTAGGATCCAATTGTTGCTGGTATAGAGGATAAAATTGCCGCATGG
ACATTTCTTCCAAAAGGTTGTGAGACAATAACATTGCACTTTTCTATTCATGCATTTCGGGGGTGCTTATTATTGCAGTT
TGTAGAGAATAAAAATATGTTCCATTTGTGAATTGTATTTGAGTTTGATAGGGGAAGAACTTTTTTTAGCTGGTTAGAAT
CCAGTCCAACGGACCTAACCAAACTGTGGACAGATCTTCATAGAAACATAAAAAATG--TCCAAAAGAGGTAGAACTTTT
GCCTTTCCATCAAGTTAGGAAAGGAGTTCTCTAAAAAAGTTGAGAAAAGAGTATGAAGTACAAATTCACTTCACACGGAG
ATACAAGTGCATCTAGCAGCTCAAGGTGTAGAAAAAGAGCTAAAACATCATACTGT----CCTAGTTACCCTACG-----
ACATTGTACTAGTTGGCCAAATTCTATGCTCAAACTACCACAACATGTCACACACTATGTTCATCATTTCCATTTGTTTT
CCTAATTGTATTTTGTGCTTTGCACAAGTTTTCAATGCAAAGGGTTAAGAGCCATGGTGTTTTACCCTCTTTGATCATGT
CCACATTTGACTTGAGAACCTGTAGAACAGCTACGTGTTTTTACTTGGACATATCATGTATCTGTTGTGGTGTCAAACAC
TCAAACCCAATGCACTACAACACC---------------------------------------------------TTTTG
CTGTTGAGCATTGGCATTAGTTTGGACTTTGAATGTCATGTCATAAAAATCCTGGGCTTGATAAAGAGGATTTTTCAGGG
TTATTTATTTGCTGCACTTCTGTTTATATATTCCAATTTTATGTGTATGGTAGAAAGTTGAACTTCAA-GGGTCTGAGAG
TCTTACTGTTTTCAGTTTTGCTTATAAGTGTTATAAAATGACCAGAGAACGGCGAAGATATGCAAGTTCTAAGATATAAG
CGTGGTGAGAAGTATGAACCGCACCATGATTTCTTCACCGACAGTGTTAACACTATCCGTGGTGGACATCGTGTAGCTAC
TGTACTCTTGTACTTGACAGACGTTGCAGAAGGAGGGGAAACGGTTTTCCCCTTAGCCAAGGTAAATTTTCTTTCTTCAC
AGTGGTGGTGCTCAATAAGATAGAAAATGTGTCAGATTGCTGATTTTTCGTCTGAGCCAGTCGCAAGTAGCCATTAGCAC
CGTAGTGTTCTCCTGTACTTCTATTTTTG--------CGATGACTCCTGTACTTATTCCTAGATATGCCTATTCATTTGT
CAAACAGGCACGTAAAGGATCACACCATAAAGATTTGTCAGAATGTGCACAGAAAGGACTTGCAGGTATAATTTTCGTGC
TATTTTCCTTTTTGGCGGTCCTAATTCCCGAGTTACCAATTAGACACCCGAAACATTTCTTGACTGACATGCACCTGTAT
CCATCGTTCCTTAGTGAAACCACGAAAAGGGGACGCCCTTCTGTTCTTCAACCTTCGCCCCGACGCGGAGACAGACCCGT
CGAGCCTCCATGGCGGATGCGAGGTCATCAAGGGGGAGAAATGGTCTGCCACGAAATGGATCCGCGTGGCCTCGTTTGAC
AAGGTCTATCACATGCCAGGCAACTGCACCGACAACAGCAACAGCTGCTCGCAGTGGGCGGCGCTGGGAGAGTGCACGAA
GAACCCGGCGTACATGGTGGGAACCGCGGCGCTGCCCGGTCACTGTAGAAGGAGCTGCAACGTGTGTTAGCGCTGGAATG
GAATCCTTGGAACGCCGCTTGTTGCTGGAGTTGGGGTTCATAAAGGAGCGGCAATGGCGGGTCGAACTGAGCTGGTGTCC
CACGAGGTTTGGTCGTCCAGATGGTACCGGTTTCTTGTTACTCCCTGATGACAAGCTGGTTCCTGGCTACCAATGTTTAT
TTATTGAT-----------------------------------------------------------------TTGTGCT
AGGCAGGCAGAGATGGGTTGATTGTTAGAGTTGGTCCATGACAGGTTTCATGAGCTTGTGGTGCCGTTTTGTGTGGGT--
-AGACTGTAGGGACTGTAATCTCTTTTCGCACTCTTGTGCTATACTAGTATATATATGTAGCACGAACACG-----CCCT
GAATTTG------------------------------------------ACTACTGTGGCACTATTACAACGAACTGAGG
GAGTGTTTGGTTCAGGGACTTTTTAGTTCCAAAGACTAGAAAAAGCCCCTAATAAGTCCTAGGAACCAAATGAGAGGGAC
TTTGGGACTAGAAAAAGACTTTACTGAAAAGTCTTTTTAATTAGTCTTTGAGACTTAAAAAAAGTCCTAGGACTTCTGAA
CCAAACACCCCCTGAATCGT-----TCATGTGCACAGAAGAGAATGTCGTTGGGCGCTTGCCCGTGGTG-----------
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--------------------------------------------------------------TGATGATGCTGAAGAGGA
GGCGGTTTGCACGGAACTGCTGCAGATGAGGGAATTGAATGCCTCTCGTCTGGATCACGAGAGGGATTGCTGGCTGGTGA
TGCCTTTCATTCATTGCAACCGCAGAAAGTGCCTTGAATTCAATTCTTCATCGCCCCCGAAATGCGGAAATGGCTACTAC
TGTAGCCACCTTGCGGTTGCCGCCTTGCCTGACTTGCGAGGTTGCGACCGAAGGGGGAGACTTGTGTGAGATCTATGAGA
TCGATTTTTTTGAAAAGAAAAACATGCTCAAAGATTCTGAAAAATTGTGTAGACACATCAACGTTTGATGTACAATCTCA
AAAAAGTTTCAGCTCCTAATTCAACTTACATTAATGGAAACAAAAAAGAATCGAATTTGAATA
>chr1B_10
---------GTTCATGGCCTGTAAGCCGGAA-AAAAAGATGATGTCGAATGATAAAG-GATTTGAGTTCAGAAATATTAT
ATCCACAATTTGTGTTTCATCACATCTTTTTTGTTTTGACCAAAAACCATCGCATCACTACCTATGCCATAAAAGCTGCT
TGCGATTTAAATTAATTCAACAAAACACAAGACTTCATAAATCAAACGGGCGTTTTAACCTGAAAATCAGGTCTACAGGT
AGTATAGGAATACATAAGCTAATCCTAATATAG-TGGCTAGCTTCCTTGTGGTGAAACCAACCCATCCGGATTGGAGCCC
TAGACTCGACACGTTCTTGTGAAAACA------TCATACGATGTTGAATCGGATGGCTTTAAATACAGAGTCTGGATAGG
CATCACGTTCAATCTTACAAC-AAAACCTTGCCA---------GTTACTTCAAATCGACGGTTATGGCCACGACGACGGT
GTCCAGTGCTCTCCCCACGTCGTCGACCCCGACTTTGGAGCACAATTATTTCATCAAACGACCGGACGAGGCT-GAGGCG
CTGATTTCAAAGATCAGAAAGGGTTTTTCTAGTTAGAAAGTCGATGTTCAACTCAAAGCTATCACTATAATATCAAAGAT
TTGATGCAGACTTTT----AACACTAAATAAAAACTCCACGGGGCCGGTGGAACACGACATCTCTGTCTGCCAGGCGCGC
GGCACGTTTGGCGGTCGGTGCCCTTGGTGATTTCGCCCGGTGTGCGCGCACGTTTCTTCGCTGCGTGAGGACCGTCGGAT
CGACGGATCCTGCCACGTGAGCGGCGCAGATCTCTCCCGTCCCGCAGCCCAGTCCCCCACTCCCTCCATTCCCCTGAACC
TGAAGCGTGGCGACTGGCGACCACTCCCAGGCTCCACCTCGCCGCCGTCGCCGCATCTCCGCTCTCCGCCACGCGCCGCG
GCCTCTTCTCCA--------CCTCCATTGGTCGCCCGCGTCGGCTAGACAGCGAGGGAGAGCGTCGGCTTAATCGCGATG
GCGCGGCCTCGGGCGTGGGCTCCCTTTCCCGGCTCCGCTCTGTCCCTCCTCTCGGTCCTCCTCCTCCTAGTCGGCCGCCG
CGGCGCTGCCGGGGGCGGCGGCGGCAGGGGA---------AGCTCCGTGTACCCGGCCCCCGTCGTCTACCCGCACCACT
CCAGACAGATCTCCTGGTATCCCAGGTCAGCCGATTTTTTTCCGACCGCCCCTACGCTCGCCTTGCTTCATCTCGCCTCC
GATCTCGATTTGGGCGGGGTCGTCGAACCAGACGGCTGATACGTGCTTCATGGCGTCCGCAGGGCCTTCCTCTACCCGCA
CTTCCTCACCGACGACGAGGCCAACCACCTCGTCTCCCTCGTCAGTGCTTCTCCCGCTGCTCCCAGTCCCCATTGAAA-C
-CAGAGAGCTCTTGCTGTGGGGGGTGTATCTGATTCTGGGCTTCTCCTTCTTGTTTAGGCGAGGGCGGAGCTCAAGAGGT
CGGCGGTCGCCGATGAAACGTCGGGCAAGAGCAAGCTCAGCGAGGTCCGCACCAGCTCCGGCACCTTCATCAGCAAGGGC
CAGGTTGGCCATTTGCTTTTCAGCTCATAGGCATTATT--TTAGAAAAGAAAATTCCATGGATTGATCATCTCTCTTGCA
TGTTTCATCTGACATTTGAGCTCAGCATCTTATGCAG---TACAATTTTCATGTTCCATAGCAATTACTCAT--GTCATA
TGTACTCTCTTATAGGGCACTCTCTATATATGTACTCTTCATGTTCTTTTATTTCTCAAGGCAACAATATCTTCTTTATT
TAGTGACTAGCCATAGCTGGGGTACATTAGTACA------------GTACAGTTCAGGTATTTTTGTTGCTTACATT-TT
TTTTTCATCTAAATGATCAATCGTGTCCAAACTTGCAGGATCCAATTGTTGCTGGTATAGAGGATAAAATTGCCGCATGG
ACATTTCTTCCAAAAGGTTGTGAGACAATAACATTGCACTTTTCTATTCATGCATTTCGGGGGTGCTTATTATTGCAG-T
TGTAGAGAATAAAAATATGTTTCATTTGTCAATTGTATTTGAGTTTGATAGGGGA-GCACCTTTGTTAGCCGGTTACAAT
CCAGTCCAGCGGACCTAACCAAACTGTGGACAGATCTTCATTGAAACATAAAAAATAAATCCGAAAGAGGTAGAACTTTT
GCCTTTCCATCAAGTTAGGAAAGGAGTTCCCTAAAAAAGTTAAGAAAATAGTATGAAGTATAAAGCCGTTTCACACGGAG
ACACAAGTGTATCTAGTAGCTCAAGGTGTAGAAAAAGAGCTAAAACATCATACTGTCTGTCCTAGTTACCCTACGGTGGT
ACATTCTACTAGCTGGCCAAATTCTATGCTCAAACTACAATAACATGTCACACACTATGTTCACCATTTCCATT-GTTTT
CCTAATTGTATTTTGTGCTCTGCACAAGTTTTCAATGCAAAGGGTTAGGAGCCATGGTGTCTTATCCTCTTTGATCATGT
CCACATTTGACTTGAGAACCTGTAGAACAGCTACGTGTTGTTACTTCGACATATCATGTATCTGTTGTGGTGTCAAACAC
TCAAACCCAATGCACTACAGCACCGTGAAACGACCTTTATATGGCCTAATTTGGAAGCTTAAACCTTCCTCTTCTTTTTG
CTGTTGAGCATTAGCATTAGTTTGGACTTTGAATGTCATGTCATAAAAATCCTTGGCTTGATAAAGAGGATTTTTCAGGG
TTGTTTGCTTGCTGCACTTCTGTTTATATCTTCCAATTTTATGTGTATGGTAGAAAGTTGAACTTCAAAGGGTCTGAGAG
TCTTACTGTTTTTAGTTTTGCTTATAAGTGTTATAAAATGACCAGAGAACGGTGAAGATATGCAAGTTCTAAGGTATAAG
CGCGGTGAGAAGTATGAACCACACTATGATTTCTTCACCGACAGTGTTAACACTATCCGTGGTGGACATCGTGTAGCTAC
TGTACTTTTGTACTTGACCGACGTTGCAGAAGGAGGGGAAACTGTTTTCCCCTTAGCCAAGGTAAATTTTCTTTCTTCAC
AGTGGTGGTGCTCAATAAGATAGAAAATGTGTCAGATTGCTGATTTGTCGTCTGAGCCAGTCACAAGTAGCCATTAGCAC
CGTAGTGTT--------CTTTTATTTTTG--------CGATGACTCCTGTACTTATTCCTAGGTATGCCTATTCATTTGT
CAAACAGGCACGTAAAGGATCACACCATAAAGATTTGTCAGAATGTGCACAGAAAGGAATTGCAGGTATAATTTTCATGC
TCTTTTCCTTTTTGGCGGTCCTAATTCGCGAGTTATTAATTAGACACCCGAAACATTTCTTGACTGACATGCACCTGTAT
CCATCGTTCCTTAGTGAAACCACGAAAAGGGGACGCCCTTCTGTTCTTCAACCTTCGGCCGGACGCCGAGACAGACCCGT
CGAGCCTCCATGGCGGATGCGAGGTCATCAAGGGGGAGAAGTGGTCGGCCACGAAATGGATCCGCGTGGCCTCGTTTGAC
AAGGTCTATCACACACCAGGCAACTGCACGGACAACAACAACAGCTGCTCGCAGTGGGCGGCGCTGGGAGAGTGCACAAA
GAACCCGGCGTACATGGTGGGAACCACGGCGCTGCCCGGTCACTGTAGAAGGAGCTGCAACGTGTGTTAGTGCTGGAATG
GAATCCTTGGAACGCCGCTTGTTGCTGAAGTTGGGGTTCATGGAGGAGCAGCAATGGCGGGTCGAACTGAGCTGGTATCC
CACGAGGTTTGGTCGTCCAGATGGTACCAGTTTCTTGCTACTCCCTGATGACAAGTTGGTTCCTGGCTACCAGTGTTTAT
TTATTGATGAATGT-------------CTAGATAGTATCAGAGGACAGACCCT-GTTGATTAGTGTTCGTGGTTTGTGCT
AGGCAGGCAGAGATGAGTTCGTTGTTAGAGTTGGTCCATGGCAGATTTCATGAGCTTGTGGTGCCATTTTTGTCT-GTAG
AAGACTGTAGGGACTGTAATCTCTTTTCTCACTCTTGTGCTGTACGGGTATATATATGTAGCACCGACACGTGTTACCCT
GAATTTGACGAACATCTCCGATTCCTTTGGTTTTGTGCTCATTTTTTGTACTACTGTGCTACTATTAGAACGAACTGA--
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---------------ATCATTCATGTCATGTGCACAGAAGAGAATGTCGTTGGACGCTTGCCCGTGGTG-----------
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--------------------------------------------------------------TGATGATGCTGAAGAAGA
GGCGGTTTGCACGGAACTGCTGCA--------------------------------------------GCTGGCTGGTGA
TGCCTTTCATTCATTGCAATCGCTTGCAGAAAGT----------------------------------------------
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---------------------------------------------------------------
>chr1D_264
CCTAA---------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------TTCAGATGGTTAGCTTCCTTGTGGTGAAACCAACTCACCTGGGTTCAATCCT
AGACTCCGACACGTTCTTGTGAAAAACATCATGTCGTACGATGCTGGATCAGATGGCTCTAAATACAGAGTCTGGATAGG
CATCACGCCCAATCTTATGAT-AAAACATTGCCATGCGGAGCGGTTACTTTAAATCGATGGTTATGGCCACGACGTCGGT
GTCCGGTGCTCTCACCACGTCGTCGACACCAACTTTCAAGCACAATTATTTCATCAAACGACCGGACGAGGCT-GAGGCG
CTGATTTCAAAGACCAGAAGGGTTTTT-CTAGTTAGAAAGTCGATGTTCAACTCAAAGCTATCACTATAATATC-AAGAT
TTGATGAAGACTTTT----AACTCTAAATAAAAACTCCACGGGGCCAGTGGAACACGACATCTCTGTGC-----------
-GCACGTTTGGCGGTCGGTGCCCCCCATGATTTCGCCGGATGTGCGCGCACGTTTCTCCGCTGCGTGATGGCCGTTGGAT
CGACGGATTCTGCCACGTGAGCGGCGCAGATCTCTCCCGGCCCGCATTCCAGTCCCCCGCTCCCTCCATTCCCCTGAA--
----GCGTGGCGACTGGCGACCACTCCCAGGCTCCACCTCGCCG------CCGCCGT----------------CGCCGCG
GCGTCTTCTCCG--------CCTCC----------CGCGTCGGCTGGACAGCGAGGGTGAGGGTCGGCTTAATTGCGATG
GCGCGGGCTC------------CCCTTCCCGGCCCAGCTCTGTCCCTCCTCTCCGTCATCCTCCTCCTCGTCGGCCGCCG
CGGAGCTGCCGGGGCCGGCGGCGGCGGCGGAGGCAGGGGCAGCTCCGTGTACCCGGCCCCCGTCGTCTACCCGCACCACT
CCAGGCAGATCTCCTGGTATCCCAGGTCAGCCGATTCTTTCC--ACCGCCCCTGCGCTCGCCTTGCTTCATCTCGCCTCC
GATCTCGATTCGGGTGGGGTCGTCGAACCGAGCGACTGACATGTGCTTCATGGCGTGCGCAGGGCCTTCCTCTACCCGCA
CTTCCTCACCGACGACGAGGCCAACCACCTCGTCTCCCTCGTCAGTGCTTCTCCCGCTGCTCCCAGTCCCCATTGACACC
-CAGAGTGCTCTTGCTGTG-GGGGTGTATCTGATTCTGGGCTTCTCCTGCTTGTTTAGGCCAGGGCGGAGCTCAAGAGGT
CGGCGGTCGCCGATGACACGTCGGGCAAGAGCAAGCTCAGCGAGGTCCGCACCAGCTCCGGCACCTTCATCAGCAAGGGC
CAGGTTGGCCATTTGCTTTTCAGCTCATAGGCATTATATTG--GAAGAGAAAAATCCATGGATTGATCATCTCTCTTGCA
TGTTTCATCTGAAATTTGAGCTCAGTATCTTATGTA-----------------TTCCATAGCAGTTATTTCTATATGTAC
T---CTCTCTTACGGGGCACTATCTG--TATGTACTCTTCATGTTCTTTTATTTCTCAAGGCAACAATATCTTCTTTATT
TAGTGACTAGCCATAGCTGTACTCTCTTACAGGGCACTATCTATATGTACAGTTCAGGTATTTCTGTTGCTTACATT-TT
TTTTCATCTG--ATGATCAATCATGTCCAAACTTGTAGGATCCAATTGTTGCTGGTATAGAGGATAAAATTGCCGCATGG
ACATTTCTTCCAAAAGGTTGTGAGACAATAACATCACACTTTTCCATTCATGCATTTCAGGGGTGCTTATTATTGCAG-T
TGTAGAGAATAAAA--ATGTTTTATTTGTGAATTGTATTTGAGTTTGATAGGGGAAGCACCTTTGTTGGCCGGTTAGAAT
CCAGTCCAACGGACCTAACCAAACTGTGGACAGATCTTCATAGAAACATAAAAAA--AATCCAAAAGAGGTAGAACTTTT
GCATTTCC--------AGGAAAGGAGTTCTCTAAAAA-GTTGAGAAAATAGTATGAAGTACAAATTCACTTCACACGGAG
ATACAAGTGCATCTAGCAGCTCAAGGTGTAGAAAAAGAGCTAAAATGTCATACTGT----CCTAGTTACCTTACGGCGGT
ACACTGTACTAGTTGGCCAAATTCTATGCTCAAATTACCACAACATGTCACACACTATGTTCACCATTTCCATTTGTTTT
CCTAATTGTATTTTGTGCTTTGCACAAGTTTTCAATGCAAAGGGTTAAGAGCCATGGTGTTTTATCCTTTTTGATCATGT
CC-CATTTGACTTGAGAACCTGTAGAACAGCTACGTGTTATTACTTGGACACATCATGTATCTGTTGTGGTGTCAAACAC
TCAAACCCAATGCACTACAACACCCTGAAACGACCTTTATATTCCCTAATTTGGAAG-TTAAACCTTCCTCTTCTTTTTG
CTGTTGAGCATTAGCATTAGTTTGGACTTTGAATGTCATGTCATAAAAATCGTGGGCTTGATAAAGAGGATTTTTCAGGG
TTG---GCTTGCTGCACTTCTGTTTATATCTTCCAATTTTATGTGTGTGGTAGAAAGTTGAACTTCAA-GGGTCCGAGAG
TCTTACTGTTTTCAGTTTTGCTTATAAGTGTCATAAAATGACCAGAGAACGGCGAAGATATGCAAGTTCTAAGATATAAG
CGCGGTGAGAAGTATGAACCGCACCATGATTTCTTCACCGACAGTGTTAACACTATCCGCGGTGGACATCGGGTAGCTAC
TGTACTTCTGTACTTAACAGACGTTGCAGAAGGAGGGGAAACTGTTTTCCCCTTAGCCAAGGTAAATTTTATTTCTTCAC
AGTGGTGGTGCTCAATAAGATAG----TGTGTCAGATTGCTGATTTGTCGTCTGAGCCAGTCACAAGTAGCCATTAGCAC
CGTAGTGTT--------CTTTTGTACTTTTATTTCTACGATGACTCCTGTACTTATTCCTAGGTATGCCTATTCATTTGT
CAAACAGGCACGTAAAGGATCACACCATAAAGATTTGTCAGAATGTGCACAGAAAGGACTTGCAGGTATAATTTTCGCGC
TCTTTTCCTTACTGGCGGTCCTAATTCCCGAGTTATTAATTAGACACCCGAAACATTTCCTGACTGACATGCACCTGTAT
CCATCGTTCCTTAGTGAAACCACGAAAAGGGGACGCCCTTCTGTTCTTCAACCTTCGCCCAGACGCCGAGACAGATCCGT
CGAGCCTCCATGGCGGATGCGAGGTCATCAAGGGGGAGAAATGGTCGGCAACAAAATGGATCCGCGTGGCCTCGTTCGAC
AAGGTCTATCACACGCCAGGCAATTGCACGGACAACAGCAACAGCTGCTCGCAGTGGGCGGCGTTGGGAGAGTGCACAAA
GAACCCAGCATACATGGTGGGGACCGTGGCGCTGCCCGGGCACTGTAGAAGGAGCTGCAACGTGTGTTAGCGCTGGAAT-
----CCTTGGGACGCCGCTCGTTGCTGGAGCTGAGGTTCATACAGGAGCGGCAATGGCGGGTCGAACTGAGCTGGTGTCG
CACGAGGTTTGGTCGTCCAGATGGTACCGGTTTCTTGTTACTCCCTGATGACAAGTTGGTTCCTGGCTACCAGTGTTTAA
TTATTGATTGATGAACGGTAAACCTGGCTAGATAGTATCAGAGGACAGACCCTTGTTGATTAGTGCTCGTGGTTTGTGCT
AGGCAGGCAGAGACGAGTTGATTGTTAGAGTTGGTCCATGACAGATTTCATGAGCCTGTGGTGCCATTTTTCTCT-GT--
-AGACTGTAGGGACTGTAATCTCTTTTCTCACTCTTGTGCTATACTGGTATATATATGTAGCATCAACACGTGTTATCCT
GAATTTGACGAACATTTCCAATTCCTTTGGTTTTGTGCTCATTTTTTGTACTACTGTGCTACTATTAGAATGAACTGA--
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---------------ATCAT-----TCATGTGCACAGAAGAGAATGTCGTTGGACGCTTGCTTGCCCGTGAGACTGCTAG
AGTAGTAACTTGCCGATGTTACTAGTCTATGTTACTATCATGAAAGAGTTCATTTATTAGGCTATAGACTCATTATGCCT
TGAAACGTGTGATGTTACTGTAACTAGCTAAGTTACCACAAACCCCTCTCTCCTCATTAATTAGCTGCCACATAAGCAAT
CTTGTATTGAAATATGTGATGTTACTAGTTAAGTTACTCCCATTGTGACTAGTTTGATATGATGATGCTGAAGAAGAGGA
GGCGGTTTGCACGGAACTGCTGCAGATGAGGGAATTGAATGCCTCTCGTCTCGATCACGAGAGGGATTGCTGGCTGGTGA
TGCCTTTCATTCATTGCA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>SNPs
SSS--SSSS----S---S-S-----SS----S---S--------SS----------SS----------------------
----------------S----S----S-----SS---S--------S---------------S--------------S--
----------S--S-S----------------S----S--------S---S---------------S------S---S--
---S------S---S--S----S----S-------------S--S---S--S--S-------------S--------S-S
------S-S--------S-------S--S---S-------S----------S----S----------S-S----S----S
----S----S--S---S----S--S-S-----S-S-S-S--S---------------S-----------S-----S----
---------------------------------------------------------S--S--S-SSSSS-S-S------
--------------S--------------S--SS---------------------------S---------------S--
---------------SSSS-------------------------------------------------------------
----------------------------------------S---------------------------S-----------
--S---------S--------------S-----------S-S-------------------------S-S----------
-----------S----------------------------------SS--------------------------------
------------SSSSSSSS---------------S--------------SS--------------------S-------
-----------------------------S---------------------S-S--------------------------
------------------------S--------S----------------------------------------------
-----------------S--------------------------------------------------------------
------------------------S-----------------------S-----S-------------------------
-----------------------------------------------------------------------SS-SS--S-
S---------S------------S---S------------S---------------------------------------
----------------------S------------------------------------------------S--------
-----S---------------------------------S-------------------------S--------------
-------------------------------------SSS----------------------------------------
---------------------S---------------------------------------S-----------S------
--------------------------SS------------------------------------SS-SSSS-SSSSSS--
----------------S---------------------------------------------------------------
------------------------------------------------------------------------------S-
---------------------S-----------------------------------S--S---S-----S---------
--------------------------------------------------------S-----------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
----------------------------------------------------------------S---------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--S---SS---------------------S--------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
------S-----------------------------------S-------------------------------------
----------------------------------------------S---------------S-----------------
---------SSSSSSSS---S-----------------------------------------S-----------------
--------------------------------------------------------------------------------
-S---------------------------------SS-------------------------------------------
------------------------------------------------------------S-----S-------------
----------------------------------------------S---------------------------------
-------------S---------------S-----------------------------------------------S--
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
-------------------------------------------------------S----------------S-------
--------------------------------------------------------------------------------
---------------S----------------------------S--------------------S----SSSSSS----
----------------------------S-----------------S-----------------S---------------
----------------------------------------------------------SS-------S----------SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS---S----------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
-------------------S---SSSS--SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_26
------AACGTTCGTGGGCAGTAAGT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------
>reverse_1606
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CGGCCATTTGCTTTTCAGCT-------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------
>forward_27
-------ACGTTCGTGGGCAGTAAGTT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>reverse_1937
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CCAATCATGTCCAAACTTGTAGGA----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>forward_547
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------ATTTCATCAAGCGTCCCGGA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>reverse_2151
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TGGTTAGAAT
CCAGTCCAACGG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>forward_1481
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GGCTGTGTCTGATTCTGGGG---------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>reverse_3183
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------GCAAGTAGCCATTAGCAC
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>forward_3083
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------TTGCAGAAGGAGGGGAAACG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>reverse_4395
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TCTGAA
CCAAACACCCCCTG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
