Multiple sequence alignment - TraesCS1A01G225400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G225400 chr1A 100.000 2597 0 0 1 2597 395484502 395487098 0.000000e+00 4796.0
1 TraesCS1A01G225400 chr1A 90.223 358 27 4 2018 2374 298615566 298615916 6.550000e-126 460.0
2 TraesCS1A01G225400 chr1A 93.281 253 15 2 1702 1953 73312172 73312423 3.160000e-99 372.0
3 TraesCS1A01G225400 chr1A 93.684 190 11 1 2018 2207 298621121 298620933 1.520000e-72 283.0
4 TraesCS1A01G225400 chr1A 89.565 115 11 1 415 529 577481214 577481101 7.490000e-31 145.0
5 TraesCS1A01G225400 chr1A 83.871 155 10 5 2442 2595 298615956 298616096 1.620000e-27 134.0
6 TraesCS1A01G225400 chr1D 96.987 531 16 0 509 1039 315034397 315034927 0.000000e+00 893.0
7 TraesCS1A01G225400 chr1D 98.361 427 7 0 1 427 315033975 315034401 0.000000e+00 750.0
8 TraesCS1A01G225400 chr1D 70.882 340 85 11 2018 2348 138968222 138968556 1.670000e-07 67.6
9 TraesCS1A01G225400 chr1B 96.648 537 18 0 503 1039 426854782 426855318 0.000000e+00 893.0
10 TraesCS1A01G225400 chr1B 97.208 394 11 0 1 394 426854225 426854618 0.000000e+00 667.0
11 TraesCS1A01G225400 chr1B 79.470 604 104 11 1052 1639 453485212 453485811 6.690000e-111 411.0
12 TraesCS1A01G225400 chr5B 90.467 493 37 6 2018 2507 232562249 232562734 2.180000e-180 641.0
13 TraesCS1A01G225400 chr5B 100.000 56 0 0 1650 1705 608200445 608200500 1.270000e-18 104.0
14 TraesCS1A01G225400 chr5B 96.429 56 2 0 1650 1705 608341306 608341361 2.750000e-15 93.5
15 TraesCS1A01G225400 chr2A 90.223 358 26 5 2018 2374 58552322 58552671 2.360000e-125 459.0
16 TraesCS1A01G225400 chr2A 93.254 252 14 3 1702 1951 603985337 603985587 4.080000e-98 368.0
17 TraesCS1A01G225400 chr2A 83.226 155 11 5 2442 2595 58552711 58552851 7.540000e-26 128.0
18 TraesCS1A01G225400 chr7B 90.578 329 23 4 2047 2374 20890152 20889831 1.850000e-116 429.0
19 TraesCS1A01G225400 chr7B 93.158 190 12 1 2018 2207 20884671 20884859 7.080000e-71 278.0
20 TraesCS1A01G225400 chr7B 94.118 102 5 1 414 514 414314440 414314541 1.240000e-33 154.0
21 TraesCS1A01G225400 chr7B 83.766 154 10 5 2443 2595 20889790 20889651 5.830000e-27 132.0
22 TraesCS1A01G225400 chr3A 94.800 250 11 2 1702 1950 474832573 474832821 3.130000e-104 388.0
23 TraesCS1A01G225400 chr3A 93.701 254 14 2 1702 1954 552144830 552144578 1.890000e-101 379.0
24 TraesCS1A01G225400 chr3A 91.071 112 5 4 416 524 208069921 208070030 2.080000e-31 147.0
25 TraesCS1A01G225400 chr7A 94.400 250 12 2 1702 1950 653720693 653720941 1.460000e-102 383.0
26 TraesCS1A01G225400 chr7A 93.254 252 15 2 1702 1952 643222347 643222597 1.140000e-98 370.0
27 TraesCS1A01G225400 chr7A 93.227 251 15 2 1702 1951 230213889 230213640 4.080000e-98 368.0
28 TraesCS1A01G225400 chr7A 94.175 103 4 2 420 521 129265772 129265873 3.460000e-34 156.0
29 TraesCS1A01G225400 chr5A 94.024 251 12 3 1702 1950 104621176 104620927 6.780000e-101 377.0
30 TraesCS1A01G225400 chr5A 93.043 115 5 3 408 520 639210585 639210472 5.750000e-37 165.0
31 TraesCS1A01G225400 chr4A 93.227 251 15 2 1702 1951 593281657 593281906 4.080000e-98 368.0
32 TraesCS1A01G225400 chr3B 84.545 330 25 7 2018 2347 754457838 754457535 1.170000e-78 303.0
33 TraesCS1A01G225400 chr3B 90.351 228 22 0 2018 2245 703881967 703881740 1.510000e-77 300.0
34 TraesCS1A01G225400 chr3B 93.229 192 10 3 2017 2207 754451921 754452110 1.970000e-71 279.0
35 TraesCS1A01G225400 chr3B 94.949 99 3 2 425 523 386058232 386058328 1.240000e-33 154.0
36 TraesCS1A01G225400 chr3B 90.476 105 9 1 2243 2347 703881362 703881259 1.250000e-28 137.0
37 TraesCS1A01G225400 chr3D 77.627 590 70 25 2018 2594 497967417 497966877 4.200000e-78 302.0
38 TraesCS1A01G225400 chr7D 84.865 185 18 3 2410 2594 4254917 4254743 7.390000e-41 178.0
39 TraesCS1A01G225400 chr2B 98.913 92 1 0 427 518 666471215 666471124 5.750000e-37 165.0
40 TraesCS1A01G225400 chr2B 98.901 91 1 0 426 516 299083106 299083016 2.070000e-36 163.0
41 TraesCS1A01G225400 chr2D 97.826 92 2 0 427 518 558071190 558071099 2.670000e-35 159.0
42 TraesCS1A01G225400 chr5D 87.931 58 2 4 1643 1700 301568521 301568573 2.160000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G225400 chr1A 395484502 395487098 2596 False 4796.0 4796 100.0000 1 2597 1 chr1A.!!$F2 2596
1 TraesCS1A01G225400 chr1A 298615566 298616096 530 False 297.0 460 87.0470 2018 2595 2 chr1A.!!$F3 577
2 TraesCS1A01G225400 chr1D 315033975 315034927 952 False 821.5 893 97.6740 1 1039 2 chr1D.!!$F2 1038
3 TraesCS1A01G225400 chr1B 426854225 426855318 1093 False 780.0 893 96.9280 1 1039 2 chr1B.!!$F2 1038
4 TraesCS1A01G225400 chr1B 453485212 453485811 599 False 411.0 411 79.4700 1052 1639 1 chr1B.!!$F1 587
5 TraesCS1A01G225400 chr2A 58552322 58552851 529 False 293.5 459 86.7245 2018 2595 2 chr2A.!!$F2 577
6 TraesCS1A01G225400 chr7B 20889651 20890152 501 True 280.5 429 87.1720 2047 2595 2 chr7B.!!$R1 548
7 TraesCS1A01G225400 chr3B 703881259 703881967 708 True 218.5 300 90.4135 2018 2347 2 chr3B.!!$R2 329
8 TraesCS1A01G225400 chr3D 497966877 497967417 540 True 302.0 302 77.6270 2018 2594 1 chr3D.!!$R1 576


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
857 929 0.241749 CAGCACGTTGCCATCACAAT 59.758 50.0 6.39 0.0 46.52 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2397 2880 0.029989 GGGGGAGGAACTATGGAGGT 60.03 60.0 0.0 0.0 41.55 3.85 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
297 298 1.374252 CCAAGAAGGGACGTCACCG 60.374 63.158 15.74 0.00 39.91 4.94
324 325 1.548357 ATGTCAGGCTGAAGCTCGGT 61.548 55.000 20.62 0.00 41.70 4.69
427 428 7.934665 ACAACATGGAACTTGTGTTATGTAGTA 59.065 33.333 0.00 0.00 35.50 1.82
438 439 5.126067 GTGTTATGTAGTACTCCCTCCGTA 58.874 45.833 0.00 0.00 0.00 4.02
439 440 5.590259 GTGTTATGTAGTACTCCCTCCGTAA 59.410 44.000 0.00 0.00 0.00 3.18
440 441 6.095440 GTGTTATGTAGTACTCCCTCCGTAAA 59.905 42.308 0.00 0.00 0.00 2.01
441 442 6.095440 TGTTATGTAGTACTCCCTCCGTAAAC 59.905 42.308 0.00 0.00 0.00 2.01
442 443 4.307032 TGTAGTACTCCCTCCGTAAACT 57.693 45.455 0.00 0.00 0.00 2.66
448 449 9.726438 GTAGTACTCCCTCCGTAAACTAATATA 57.274 37.037 0.00 0.00 0.00 0.86
451 452 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
452 453 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
453 454 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
454 455 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
456 457 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
472 473 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
473 474 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
474 475 7.828712 AGAGCGTTTAGATCACTACTTTAGTT 58.171 34.615 0.00 0.00 37.82 2.24
476 477 9.733219 GAGCGTTTAGATCACTACTTTAGTTAT 57.267 33.333 0.00 0.00 36.76 1.89
477 478 9.733219 AGCGTTTAGATCACTACTTTAGTTATC 57.267 33.333 0.00 0.95 38.88 1.75
478 479 9.733219 GCGTTTAGATCACTACTTTAGTTATCT 57.267 33.333 12.46 12.46 46.18 1.98
571 643 3.020627 GCTCATCGCCATGTGCTC 58.979 61.111 10.56 0.00 43.39 4.26
628 700 1.483827 TGAGGCTGCTACAAGATCTGG 59.516 52.381 0.00 0.00 0.00 3.86
656 728 1.846439 GATCAACCATCCCCTTCTCCA 59.154 52.381 0.00 0.00 0.00 3.86
729 801 4.453478 TCAATCTCATATTTGATGGCGCTC 59.547 41.667 7.64 0.00 0.00 5.03
857 929 0.241749 CAGCACGTTGCCATCACAAT 59.758 50.000 6.39 0.00 46.52 2.71
977 1049 6.706295 AGTTTTTCCTTCTCTAGATGACAGG 58.294 40.000 0.00 0.00 0.00 4.00
985 1057 6.351371 CCTTCTCTAGATGACAGGCACTTTTA 60.351 42.308 0.00 0.00 34.60 1.52
1030 1102 3.754850 TGAGTCTCCATGCACAAATCAAG 59.245 43.478 0.00 0.00 0.00 3.02
1039 1111 5.697633 CCATGCACAAATCAAGCTTACTTTT 59.302 36.000 0.00 0.00 32.29 2.27
1040 1112 6.128742 CCATGCACAAATCAAGCTTACTTTTC 60.129 38.462 0.00 0.00 32.29 2.29
1041 1113 6.147864 TGCACAAATCAAGCTTACTTTTCT 57.852 33.333 0.00 0.00 32.29 2.52
1042 1114 6.208644 TGCACAAATCAAGCTTACTTTTCTC 58.791 36.000 0.00 0.00 32.29 2.87
1043 1115 5.340667 GCACAAATCAAGCTTACTTTTCTCG 59.659 40.000 0.00 0.00 32.29 4.04
1044 1116 6.658831 CACAAATCAAGCTTACTTTTCTCGA 58.341 36.000 0.00 0.00 32.29 4.04
1045 1117 7.132213 CACAAATCAAGCTTACTTTTCTCGAA 58.868 34.615 0.00 0.00 32.29 3.71
1046 1118 7.805071 CACAAATCAAGCTTACTTTTCTCGAAT 59.195 33.333 0.00 0.00 32.29 3.34
1047 1119 8.999431 ACAAATCAAGCTTACTTTTCTCGAATA 58.001 29.630 0.00 0.00 32.29 1.75
1048 1120 9.267096 CAAATCAAGCTTACTTTTCTCGAATAC 57.733 33.333 0.00 0.00 32.29 1.89
1049 1121 6.627690 TCAAGCTTACTTTTCTCGAATACG 57.372 37.500 0.00 0.00 35.81 3.06
1050 1122 6.154445 TCAAGCTTACTTTTCTCGAATACGT 58.846 36.000 0.00 0.00 35.90 3.57
1086 1158 4.347360 TGATCATGCTGACCTAATCTGG 57.653 45.455 0.00 0.00 0.00 3.86
1089 1161 2.702478 TCATGCTGACCTAATCTGGAGG 59.298 50.000 0.00 0.00 40.22 4.30
1104 1176 3.363844 GAGGTCCAGAGCTCCGCAC 62.364 68.421 10.93 3.97 46.96 5.34
1107 1179 1.739562 GTCCAGAGCTCCGCACAAG 60.740 63.158 10.93 0.00 0.00 3.16
1108 1180 1.908299 TCCAGAGCTCCGCACAAGA 60.908 57.895 10.93 0.00 0.00 3.02
1119 1191 2.548057 TCCGCACAAGATCAAACTGTTC 59.452 45.455 0.00 0.00 0.00 3.18
1122 1194 2.918131 GCACAAGATCAAACTGTTCGCC 60.918 50.000 0.00 0.00 0.00 5.54
1128 1200 1.165907 TCAAACTGTTCGCCTGGCTG 61.166 55.000 17.92 10.52 0.00 4.85
1131 1203 3.429141 CTGTTCGCCTGGCTGCTG 61.429 66.667 17.92 0.47 0.00 4.41
1134 1206 2.203337 TTCGCCTGGCTGCTGTTT 60.203 55.556 17.92 0.00 0.00 2.83
1135 1207 2.260869 TTCGCCTGGCTGCTGTTTC 61.261 57.895 17.92 0.00 0.00 2.78
1137 1209 4.410743 GCCTGGCTGCTGTTTCGC 62.411 66.667 12.43 0.00 0.00 4.70
1149 1221 1.131218 GTTTCGCGGCCGACTAAAC 59.869 57.895 33.48 27.83 44.30 2.01
1152 1224 3.484547 CGCGGCCGACTAAACACC 61.485 66.667 33.48 6.41 36.29 4.16
1155 1227 2.344872 GGCCGACTAAACACCCGT 59.655 61.111 0.00 0.00 0.00 5.28
1161 1233 1.333435 CGACTAAACACCCGTGCAAAC 60.333 52.381 0.00 0.00 0.00 2.93
1167 1239 2.203294 ACCCGTGCAAACCTGTCC 60.203 61.111 0.00 0.00 0.00 4.02
1176 1248 2.165437 TGCAAACCTGTCCTTCAAACAC 59.835 45.455 0.00 0.00 0.00 3.32
1180 1252 2.586425 ACCTGTCCTTCAAACACATGG 58.414 47.619 0.00 0.00 0.00 3.66
1181 1253 2.174639 ACCTGTCCTTCAAACACATGGA 59.825 45.455 0.00 0.00 0.00 3.41
1186 1258 4.460034 TGTCCTTCAAACACATGGATGATG 59.540 41.667 0.00 0.00 38.15 3.07
1191 1263 1.108776 AACACATGGATGATGCTGCC 58.891 50.000 0.00 0.00 35.15 4.85
1197 1269 2.722487 GATGATGCTGCCAGCTGC 59.278 61.111 18.96 13.87 42.97 5.25
1205 1277 3.390183 CTGCCAGCTGCCCACGATA 62.390 63.158 8.66 0.00 40.16 2.92
1213 1285 2.980233 GCCCACGATATGCTGGCC 60.980 66.667 0.00 0.00 36.07 5.36
1227 1299 2.266055 GGCCCCTCTGAAGACACG 59.734 66.667 0.00 0.00 0.00 4.49
1245 1317 2.998670 CACGACTCATCTGTTCATTGCT 59.001 45.455 0.00 0.00 0.00 3.91
1248 1320 3.434641 CGACTCATCTGTTCATTGCTTGT 59.565 43.478 0.00 0.00 0.00 3.16
1249 1321 4.627035 CGACTCATCTGTTCATTGCTTGTA 59.373 41.667 0.00 0.00 0.00 2.41
1255 1327 0.515564 GTTCATTGCTTGTACGCGGT 59.484 50.000 12.47 0.00 0.00 5.68
1256 1328 1.069500 GTTCATTGCTTGTACGCGGTT 60.069 47.619 12.47 0.00 0.00 4.44
1257 1329 1.231221 TCATTGCTTGTACGCGGTTT 58.769 45.000 12.47 0.00 0.00 3.27
1258 1330 1.195900 TCATTGCTTGTACGCGGTTTC 59.804 47.619 12.47 0.00 0.00 2.78
1266 1338 1.076332 GTACGCGGTTTCTGCAGATT 58.924 50.000 19.04 0.00 0.00 2.40
1271 1343 0.527565 CGGTTTCTGCAGATTTGGGG 59.472 55.000 19.04 1.45 0.00 4.96
1272 1344 0.247460 GGTTTCTGCAGATTTGGGGC 59.753 55.000 19.04 2.99 0.00 5.80
1275 1347 0.178938 TTCTGCAGATTTGGGGCCAA 60.179 50.000 19.04 0.00 0.00 4.52
1293 1365 2.572104 CCAACTAGGCCTTTCCACTACT 59.428 50.000 12.58 0.00 37.29 2.57
1305 1377 0.905357 CCACTACTCCCAGGTTCCAG 59.095 60.000 0.00 0.00 0.00 3.86
1311 1383 1.651770 ACTCCCAGGTTCCAGGATCTA 59.348 52.381 1.73 0.00 0.00 1.98
1315 1387 2.412591 CCAGGTTCCAGGATCTATGGT 58.587 52.381 14.63 0.00 39.01 3.55
1321 1393 2.408565 TCCAGGATCTATGGTTGGTCC 58.591 52.381 14.63 0.00 39.01 4.46
1342 1414 3.774528 CCCCGCAGCAGCTAGACA 61.775 66.667 0.00 0.00 39.10 3.41
1359 1431 3.329889 AGCATGGTCTGGCCGGAA 61.330 61.111 18.11 1.01 41.21 4.30
1365 1437 2.656069 GGTCTGGCCGGAAGTGCTA 61.656 63.158 18.11 0.00 0.00 3.49
1368 1440 1.153549 CTGGCCGGAAGTGCTACTC 60.154 63.158 5.28 0.00 0.00 2.59
1374 1446 0.109873 CGGAAGTGCTACTCGTCGTT 60.110 55.000 0.00 0.00 0.00 3.85
1375 1447 1.615502 GGAAGTGCTACTCGTCGTTC 58.384 55.000 0.00 0.00 0.00 3.95
1376 1448 1.068748 GGAAGTGCTACTCGTCGTTCA 60.069 52.381 0.00 0.00 0.00 3.18
1377 1449 1.977412 GAAGTGCTACTCGTCGTTCAC 59.023 52.381 0.00 0.00 0.00 3.18
1382 1454 1.068748 GCTACTCGTCGTTCACTGGAA 60.069 52.381 0.00 0.00 0.00 3.53
1384 1456 1.315690 ACTCGTCGTTCACTGGAAGA 58.684 50.000 0.00 0.00 37.43 2.87
1390 1462 2.484264 GTCGTTCACTGGAAGATTTGGG 59.516 50.000 0.00 0.00 37.43 4.12
1395 1467 2.305927 TCACTGGAAGATTTGGGACTCC 59.694 50.000 0.00 0.00 37.43 3.85
1398 1470 3.744907 CTGGAAGATTTGGGACTCCCGA 61.745 54.545 9.74 4.61 41.99 5.14
1410 1482 2.357034 TCCCGAAACGCTGCTGTC 60.357 61.111 0.00 0.00 0.00 3.51
1413 1485 1.493311 CCGAAACGCTGCTGTCTTC 59.507 57.895 0.00 4.44 0.00 2.87
1416 1488 1.222115 GAAACGCTGCTGTCTTCCGT 61.222 55.000 0.00 0.00 0.00 4.69
1418 1490 0.814010 AACGCTGCTGTCTTCCGTTT 60.814 50.000 0.00 0.00 38.79 3.60
1432 1504 5.230942 TCTTCCGTTTTGAAGATCACTCTC 58.769 41.667 0.00 0.00 44.35 3.20
1437 1509 4.561105 GTTTTGAAGATCACTCTCCTCGT 58.439 43.478 0.00 0.00 0.00 4.18
1460 1532 7.758076 TCGTACTACCATTCAGAACATTGTAAG 59.242 37.037 0.00 0.00 0.00 2.34
1465 1537 5.473504 ACCATTCAGAACATTGTAAGTGACC 59.526 40.000 0.00 0.00 0.00 4.02
1471 1543 5.760253 CAGAACATTGTAAGTGACCTTGAGT 59.240 40.000 0.00 0.00 31.89 3.41
1473 1545 7.441157 CAGAACATTGTAAGTGACCTTGAGTTA 59.559 37.037 0.00 0.00 31.89 2.24
1479 1551 6.387465 TGTAAGTGACCTTGAGTTATTCTCG 58.613 40.000 0.00 0.00 45.46 4.04
1482 1554 4.081420 AGTGACCTTGAGTTATTCTCGCAT 60.081 41.667 0.00 0.00 45.46 4.73
1485 1557 2.219674 CCTTGAGTTATTCTCGCATCGC 59.780 50.000 0.00 0.00 45.46 4.58
1486 1558 2.871182 TGAGTTATTCTCGCATCGCT 57.129 45.000 0.00 0.00 45.46 4.93
1488 1560 3.521560 TGAGTTATTCTCGCATCGCTTT 58.478 40.909 0.00 0.00 45.46 3.51
1491 1563 4.933330 AGTTATTCTCGCATCGCTTTAGA 58.067 39.130 0.00 0.00 0.00 2.10
1494 1566 3.717400 TTCTCGCATCGCTTTAGAGAT 57.283 42.857 0.00 0.00 37.73 2.75
1496 1568 2.030717 TCTCGCATCGCTTTAGAGATCC 60.031 50.000 0.00 0.00 32.21 3.36
1509 1589 0.033781 GAGATCCTGCTAGCTGCCAG 59.966 60.000 17.23 4.44 42.00 4.85
1511 1591 1.692042 ATCCTGCTAGCTGCCAGGT 60.692 57.895 25.01 14.75 42.00 4.00
1525 1605 2.514458 CCAGGTCTTGGCTTGGTTAT 57.486 50.000 0.00 0.00 40.87 1.89
1539 1622 2.352388 TGGTTATCTTACCACGCTTGC 58.648 47.619 0.00 0.00 43.14 4.01
1558 1641 1.406341 GCCGTGCCCTTGTAATCTGTA 60.406 52.381 0.00 0.00 0.00 2.74
1560 1643 3.541632 CCGTGCCCTTGTAATCTGTAAT 58.458 45.455 0.00 0.00 0.00 1.89
1561 1644 3.560068 CCGTGCCCTTGTAATCTGTAATC 59.440 47.826 0.00 0.00 0.00 1.75
1562 1645 4.442706 CGTGCCCTTGTAATCTGTAATCT 58.557 43.478 0.00 0.00 0.00 2.40
1563 1646 5.452776 CCGTGCCCTTGTAATCTGTAATCTA 60.453 44.000 0.00 0.00 0.00 1.98
1564 1647 5.462398 CGTGCCCTTGTAATCTGTAATCTAC 59.538 44.000 0.00 0.00 0.00 2.59
1572 1655 7.182817 TGTAATCTGTAATCTACCACTGCTT 57.817 36.000 0.00 0.00 0.00 3.91
1602 1685 9.295825 CCAATTTGGCCACTTGAGTAATATATA 57.704 33.333 22.97 0.00 0.00 0.86
1620 1703 2.901338 TATAGATGGGGACTCCTCCG 57.099 55.000 0.00 0.00 37.46 4.63
1621 1704 0.115349 ATAGATGGGGACTCCTCCGG 59.885 60.000 0.00 0.00 37.46 5.14
1672 1759 5.944049 CACGAGTGTGCGTACTTTATATT 57.056 39.130 4.97 0.00 43.59 1.28
1674 1761 7.618964 CACGAGTGTGCGTACTTTATATTAT 57.381 36.000 4.97 0.00 43.59 1.28
1675 1762 8.718047 CACGAGTGTGCGTACTTTATATTATA 57.282 34.615 4.97 0.00 43.59 0.98
1676 1763 8.838009 CACGAGTGTGCGTACTTTATATTATAG 58.162 37.037 4.97 0.00 43.59 1.31
1677 1764 8.777413 ACGAGTGTGCGTACTTTATATTATAGA 58.223 33.333 4.97 0.00 43.61 1.98
1678 1765 9.603298 CGAGTGTGCGTACTTTATATTATAGAA 57.397 33.333 4.97 0.00 0.00 2.10
1689 1776 9.777008 ACTTTATATTATAGAAGAGAGAGGGGG 57.223 37.037 5.52 0.00 0.00 5.40
1690 1777 9.777008 CTTTATATTATAGAAGAGAGAGGGGGT 57.223 37.037 0.00 0.00 0.00 4.95
1694 1781 9.777008 ATATTATAGAAGAGAGAGGGGGTAAAG 57.223 37.037 0.00 0.00 0.00 1.85
1695 1782 5.752864 ATAGAAGAGAGAGGGGGTAAAGA 57.247 43.478 0.00 0.00 0.00 2.52
1696 1783 3.989056 AGAAGAGAGAGGGGGTAAAGAG 58.011 50.000 0.00 0.00 0.00 2.85
1697 1784 2.168458 AGAGAGAGGGGGTAAAGAGC 57.832 55.000 0.00 0.00 0.00 4.09
1698 1785 1.124780 GAGAGAGGGGGTAAAGAGCC 58.875 60.000 0.00 0.00 43.02 4.70
1704 1791 4.164264 GGGTAAAGAGCCCCTCCA 57.836 61.111 0.00 0.00 40.26 3.86
1705 1792 2.634100 GGGTAAAGAGCCCCTCCAT 58.366 57.895 0.00 0.00 40.26 3.41
1706 1793 0.927029 GGGTAAAGAGCCCCTCCATT 59.073 55.000 0.00 0.00 40.26 3.16
1707 1794 1.288037 GGGTAAAGAGCCCCTCCATTT 59.712 52.381 0.00 0.00 40.26 2.32
1708 1795 2.656002 GGTAAAGAGCCCCTCCATTTC 58.344 52.381 0.00 0.00 0.00 2.17
1709 1796 2.025321 GGTAAAGAGCCCCTCCATTTCA 60.025 50.000 0.00 0.00 0.00 2.69
1710 1797 2.521547 AAAGAGCCCCTCCATTTCAG 57.478 50.000 0.00 0.00 0.00 3.02
1711 1798 1.376649 AAGAGCCCCTCCATTTCAGT 58.623 50.000 0.00 0.00 0.00 3.41
1712 1799 0.915364 AGAGCCCCTCCATTTCAGTC 59.085 55.000 0.00 0.00 0.00 3.51
1713 1800 0.620556 GAGCCCCTCCATTTCAGTCA 59.379 55.000 0.00 0.00 0.00 3.41
1714 1801 0.622665 AGCCCCTCCATTTCAGTCAG 59.377 55.000 0.00 0.00 0.00 3.51
1715 1802 1.034292 GCCCCTCCATTTCAGTCAGC 61.034 60.000 0.00 0.00 0.00 4.26
1716 1803 0.329261 CCCCTCCATTTCAGTCAGCA 59.671 55.000 0.00 0.00 0.00 4.41
1717 1804 1.064166 CCCCTCCATTTCAGTCAGCAT 60.064 52.381 0.00 0.00 0.00 3.79
1718 1805 2.173356 CCCCTCCATTTCAGTCAGCATA 59.827 50.000 0.00 0.00 0.00 3.14
1719 1806 3.181436 CCCCTCCATTTCAGTCAGCATAT 60.181 47.826 0.00 0.00 0.00 1.78
1720 1807 4.467769 CCCTCCATTTCAGTCAGCATATT 58.532 43.478 0.00 0.00 0.00 1.28
1721 1808 5.456619 CCCCTCCATTTCAGTCAGCATATTA 60.457 44.000 0.00 0.00 0.00 0.98
1722 1809 5.704515 CCCTCCATTTCAGTCAGCATATTAG 59.295 44.000 0.00 0.00 0.00 1.73
1723 1810 6.464892 CCCTCCATTTCAGTCAGCATATTAGA 60.465 42.308 0.00 0.00 0.00 2.10
1724 1811 6.994496 CCTCCATTTCAGTCAGCATATTAGAA 59.006 38.462 0.00 0.00 0.00 2.10
1725 1812 7.664731 CCTCCATTTCAGTCAGCATATTAGAAT 59.335 37.037 0.00 0.00 0.00 2.40
1726 1813 8.985315 TCCATTTCAGTCAGCATATTAGAATT 57.015 30.769 0.00 0.00 0.00 2.17
1727 1814 9.060347 TCCATTTCAGTCAGCATATTAGAATTC 57.940 33.333 0.00 0.00 0.00 2.17
1728 1815 9.064706 CCATTTCAGTCAGCATATTAGAATTCT 57.935 33.333 13.56 13.56 0.00 2.40
1731 1818 8.883954 TTCAGTCAGCATATTAGAATTCTCTG 57.116 34.615 12.24 11.79 32.70 3.35
1732 1819 8.242729 TCAGTCAGCATATTAGAATTCTCTGA 57.757 34.615 12.24 13.91 32.70 3.27
1733 1820 8.699130 TCAGTCAGCATATTAGAATTCTCTGAA 58.301 33.333 18.63 7.53 32.08 3.02
1734 1821 8.980610 CAGTCAGCATATTAGAATTCTCTGAAG 58.019 37.037 18.63 12.87 32.08 3.02
1735 1822 8.703743 AGTCAGCATATTAGAATTCTCTGAAGT 58.296 33.333 18.63 10.13 32.08 3.01
1736 1823 8.977505 GTCAGCATATTAGAATTCTCTGAAGTC 58.022 37.037 18.63 7.83 32.08 3.01
1737 1824 8.699130 TCAGCATATTAGAATTCTCTGAAGTCA 58.301 33.333 12.24 0.00 32.70 3.41
1738 1825 9.322773 CAGCATATTAGAATTCTCTGAAGTCAA 57.677 33.333 12.24 0.00 32.70 3.18
1739 1826 9.896645 AGCATATTAGAATTCTCTGAAGTCAAA 57.103 29.630 12.24 0.00 32.70 2.69
1792 1879 5.864418 AAAATATCAACATCTGCCATGCT 57.136 34.783 0.00 0.00 0.00 3.79
1793 1880 6.964807 AAAATATCAACATCTGCCATGCTA 57.035 33.333 0.00 0.00 0.00 3.49
1794 1881 6.964807 AAATATCAACATCTGCCATGCTAA 57.035 33.333 0.00 0.00 0.00 3.09
1795 1882 6.964807 AATATCAACATCTGCCATGCTAAA 57.035 33.333 0.00 0.00 0.00 1.85
1796 1883 4.913335 ATCAACATCTGCCATGCTAAAG 57.087 40.909 0.00 0.00 0.00 1.85
1797 1884 3.689347 TCAACATCTGCCATGCTAAAGT 58.311 40.909 0.00 0.00 0.00 2.66
1798 1885 4.081406 TCAACATCTGCCATGCTAAAGTT 58.919 39.130 0.00 0.00 0.00 2.66
1799 1886 5.252547 TCAACATCTGCCATGCTAAAGTTA 58.747 37.500 0.00 0.00 0.00 2.24
1800 1887 5.887598 TCAACATCTGCCATGCTAAAGTTAT 59.112 36.000 0.00 0.00 0.00 1.89
1801 1888 7.053498 TCAACATCTGCCATGCTAAAGTTATA 58.947 34.615 0.00 0.00 0.00 0.98
1802 1889 7.720957 TCAACATCTGCCATGCTAAAGTTATAT 59.279 33.333 0.00 0.00 0.00 0.86
1803 1890 9.002600 CAACATCTGCCATGCTAAAGTTATATA 57.997 33.333 0.00 0.00 0.00 0.86
1804 1891 9.573166 AACATCTGCCATGCTAAAGTTATATAA 57.427 29.630 0.00 0.00 0.00 0.98
1805 1892 9.745018 ACATCTGCCATGCTAAAGTTATATAAT 57.255 29.630 0.00 0.00 0.00 1.28
1831 1918 8.627208 ATGAAACTTTAAGTCATGACACATCT 57.373 30.769 27.02 3.53 30.84 2.90
1832 1919 9.725019 ATGAAACTTTAAGTCATGACACATCTA 57.275 29.630 27.02 7.86 30.84 1.98
1833 1920 9.208022 TGAAACTTTAAGTCATGACACATCTAG 57.792 33.333 27.02 16.90 0.00 2.43
1834 1921 9.209175 GAAACTTTAAGTCATGACACATCTAGT 57.791 33.333 27.02 17.46 0.00 2.57
1858 1945 9.912634 AGTGTATTGATTTTTAGGTTGTGAATG 57.087 29.630 0.00 0.00 0.00 2.67
1859 1946 9.691362 GTGTATTGATTTTTAGGTTGTGAATGT 57.309 29.630 0.00 0.00 0.00 2.71
1863 1950 8.641499 TTGATTTTTAGGTTGTGAATGTTGAC 57.359 30.769 0.00 0.00 0.00 3.18
1864 1951 7.776107 TGATTTTTAGGTTGTGAATGTTGACA 58.224 30.769 0.00 0.00 0.00 3.58
1865 1952 7.704472 TGATTTTTAGGTTGTGAATGTTGACAC 59.296 33.333 0.00 0.00 37.51 3.67
1866 1953 6.767524 TTTTAGGTTGTGAATGTTGACACT 57.232 33.333 0.00 0.00 37.81 3.55
1867 1954 6.767524 TTTAGGTTGTGAATGTTGACACTT 57.232 33.333 0.00 0.00 37.81 3.16
1868 1955 6.767524 TTAGGTTGTGAATGTTGACACTTT 57.232 33.333 0.00 0.00 37.81 2.66
1869 1956 5.659440 AGGTTGTGAATGTTGACACTTTT 57.341 34.783 0.00 0.00 37.81 2.27
1870 1957 6.036577 AGGTTGTGAATGTTGACACTTTTT 57.963 33.333 0.00 0.00 37.81 1.94
1890 1977 6.524101 TTTTTCTACAAAGCTGGTCAAACT 57.476 33.333 0.00 0.00 0.00 2.66
1891 1978 6.524101 TTTTCTACAAAGCTGGTCAAACTT 57.476 33.333 0.00 0.00 0.00 2.66
1892 1979 6.524101 TTTCTACAAAGCTGGTCAAACTTT 57.476 33.333 0.00 0.00 34.03 2.66
1893 1980 7.633193 TTTCTACAAAGCTGGTCAAACTTTA 57.367 32.000 0.00 0.00 32.54 1.85
1894 1981 6.613755 TCTACAAAGCTGGTCAAACTTTAC 57.386 37.500 0.00 0.00 32.54 2.01
1895 1982 4.287238 ACAAAGCTGGTCAAACTTTACG 57.713 40.909 0.00 0.00 32.54 3.18
1896 1983 3.942748 ACAAAGCTGGTCAAACTTTACGA 59.057 39.130 0.00 0.00 32.54 3.43
1897 1984 4.035208 ACAAAGCTGGTCAAACTTTACGAG 59.965 41.667 0.00 0.00 32.54 4.18
1898 1985 2.767505 AGCTGGTCAAACTTTACGAGG 58.232 47.619 0.00 0.00 0.00 4.63
1899 1986 1.197036 GCTGGTCAAACTTTACGAGGC 59.803 52.381 0.00 0.00 0.00 4.70
1900 1987 2.767505 CTGGTCAAACTTTACGAGGCT 58.232 47.619 0.00 0.00 0.00 4.58
1901 1988 3.139077 CTGGTCAAACTTTACGAGGCTT 58.861 45.455 0.00 0.00 0.00 4.35
1902 1989 4.312443 CTGGTCAAACTTTACGAGGCTTA 58.688 43.478 0.00 0.00 0.00 3.09
1903 1990 4.706035 TGGTCAAACTTTACGAGGCTTAA 58.294 39.130 0.00 0.00 0.00 1.85
1904 1991 4.512571 TGGTCAAACTTTACGAGGCTTAAC 59.487 41.667 0.00 0.00 0.00 2.01
1905 1992 4.753610 GGTCAAACTTTACGAGGCTTAACT 59.246 41.667 0.00 0.00 0.00 2.24
1906 1993 5.237996 GGTCAAACTTTACGAGGCTTAACTT 59.762 40.000 0.00 0.00 0.00 2.66
1907 1994 6.361114 GTCAAACTTTACGAGGCTTAACTTC 58.639 40.000 0.00 0.00 0.00 3.01
1908 1995 6.018507 GTCAAACTTTACGAGGCTTAACTTCA 60.019 38.462 0.00 0.00 0.00 3.02
1909 1996 6.202188 TCAAACTTTACGAGGCTTAACTTCAG 59.798 38.462 0.00 0.00 0.00 3.02
1910 1997 5.211174 ACTTTACGAGGCTTAACTTCAGT 57.789 39.130 0.00 0.00 0.00 3.41
1911 1998 5.228665 ACTTTACGAGGCTTAACTTCAGTC 58.771 41.667 0.00 0.00 0.00 3.51
1912 1999 4.859304 TTACGAGGCTTAACTTCAGTCA 57.141 40.909 0.00 0.00 0.00 3.41
1913 2000 3.746045 ACGAGGCTTAACTTCAGTCAA 57.254 42.857 0.00 0.00 0.00 3.18
1914 2001 4.067972 ACGAGGCTTAACTTCAGTCAAA 57.932 40.909 0.00 0.00 0.00 2.69
1915 2002 4.642429 ACGAGGCTTAACTTCAGTCAAAT 58.358 39.130 0.00 0.00 0.00 2.32
1916 2003 4.691216 ACGAGGCTTAACTTCAGTCAAATC 59.309 41.667 0.00 0.00 0.00 2.17
1917 2004 4.932200 CGAGGCTTAACTTCAGTCAAATCT 59.068 41.667 0.00 0.00 0.00 2.40
1918 2005 5.409826 CGAGGCTTAACTTCAGTCAAATCTT 59.590 40.000 0.00 0.00 0.00 2.40
1919 2006 6.590292 CGAGGCTTAACTTCAGTCAAATCTTA 59.410 38.462 0.00 0.00 0.00 2.10
1920 2007 7.278868 CGAGGCTTAACTTCAGTCAAATCTTAT 59.721 37.037 0.00 0.00 0.00 1.73
1921 2008 9.601217 GAGGCTTAACTTCAGTCAAATCTTATA 57.399 33.333 0.00 0.00 0.00 0.98
1924 2011 9.657121 GCTTAACTTCAGTCAAATCTTATATGC 57.343 33.333 0.00 0.00 0.00 3.14
1928 2015 9.846248 AACTTCAGTCAAATCTTATATGCAAAC 57.154 29.630 0.00 0.00 0.00 2.93
1929 2016 9.236006 ACTTCAGTCAAATCTTATATGCAAACT 57.764 29.630 0.00 0.00 0.00 2.66
1940 2027 7.981142 TCTTATATGCAAACTAAAAAGGACCG 58.019 34.615 0.00 0.00 0.00 4.79
1941 2028 3.934457 ATGCAAACTAAAAAGGACCGG 57.066 42.857 0.00 0.00 0.00 5.28
1942 2029 2.933573 TGCAAACTAAAAAGGACCGGA 58.066 42.857 9.46 0.00 0.00 5.14
1943 2030 2.882137 TGCAAACTAAAAAGGACCGGAG 59.118 45.455 9.46 0.00 0.00 4.63
1961 2048 5.831702 CGGAGGGAGTACATATATACACC 57.168 47.826 0.00 0.00 35.66 4.16
1969 2056 7.959175 GGAGTACATATATACACCCAACTTCA 58.041 38.462 0.00 0.00 31.59 3.02
1970 2057 7.871463 GGAGTACATATATACACCCAACTTCAC 59.129 40.741 0.00 0.00 31.59 3.18
1971 2058 7.431249 AGTACATATATACACCCAACTTCACG 58.569 38.462 0.00 0.00 0.00 4.35
1972 2059 5.054477 ACATATATACACCCAACTTCACGC 58.946 41.667 0.00 0.00 0.00 5.34
1973 2060 1.999048 TATACACCCAACTTCACGCG 58.001 50.000 3.53 3.53 0.00 6.01
1974 2061 0.034337 ATACACCCAACTTCACGCGT 59.966 50.000 5.58 5.58 0.00 6.01
1975 2062 0.598158 TACACCCAACTTCACGCGTC 60.598 55.000 9.86 0.00 0.00 5.19
1976 2063 2.280592 ACCCAACTTCACGCGTCC 60.281 61.111 9.86 0.00 0.00 4.79
1977 2064 2.280524 CCCAACTTCACGCGTCCA 60.281 61.111 9.86 0.00 0.00 4.02
1978 2065 2.317609 CCCAACTTCACGCGTCCAG 61.318 63.158 9.86 11.09 0.00 3.86
1979 2066 1.594293 CCAACTTCACGCGTCCAGT 60.594 57.895 9.86 11.85 0.00 4.00
1980 2067 0.319211 CCAACTTCACGCGTCCAGTA 60.319 55.000 17.86 0.00 0.00 2.74
1981 2068 1.671850 CCAACTTCACGCGTCCAGTAT 60.672 52.381 17.86 7.83 0.00 2.12
1982 2069 2.416296 CCAACTTCACGCGTCCAGTATA 60.416 50.000 17.86 0.00 0.00 1.47
1983 2070 2.556534 ACTTCACGCGTCCAGTATAC 57.443 50.000 9.86 0.00 0.00 1.47
1984 2071 1.814394 ACTTCACGCGTCCAGTATACA 59.186 47.619 9.86 0.00 0.00 2.29
1985 2072 2.182825 CTTCACGCGTCCAGTATACAC 58.817 52.381 9.86 0.00 0.00 2.90
1986 2073 0.097499 TCACGCGTCCAGTATACACG 59.903 55.000 9.86 7.70 36.60 4.49
1990 2077 2.578369 CGTCCAGTATACACGCTGC 58.422 57.895 5.50 0.00 0.00 5.25
1991 2078 0.100682 CGTCCAGTATACACGCTGCT 59.899 55.000 5.50 0.00 0.00 4.24
1992 2079 1.332686 CGTCCAGTATACACGCTGCTA 59.667 52.381 5.50 0.00 0.00 3.49
1993 2080 2.223409 CGTCCAGTATACACGCTGCTAA 60.223 50.000 5.50 0.00 0.00 3.09
1994 2081 3.114065 GTCCAGTATACACGCTGCTAAC 58.886 50.000 5.50 0.00 0.00 2.34
1995 2082 3.021695 TCCAGTATACACGCTGCTAACT 58.978 45.455 5.50 0.00 0.00 2.24
1996 2083 3.446161 TCCAGTATACACGCTGCTAACTT 59.554 43.478 5.50 0.00 0.00 2.66
1997 2084 3.797256 CCAGTATACACGCTGCTAACTTC 59.203 47.826 5.50 0.00 0.00 3.01
1998 2085 4.440250 CCAGTATACACGCTGCTAACTTCT 60.440 45.833 5.50 0.00 0.00 2.85
1999 2086 4.735822 CAGTATACACGCTGCTAACTTCTC 59.264 45.833 5.50 0.00 0.00 2.87
2000 2087 3.868757 ATACACGCTGCTAACTTCTCA 57.131 42.857 0.00 0.00 0.00 3.27
2001 2088 1.784525 ACACGCTGCTAACTTCTCAC 58.215 50.000 0.00 0.00 0.00 3.51
2002 2089 0.710567 CACGCTGCTAACTTCTCACG 59.289 55.000 0.00 0.00 0.00 4.35
2003 2090 0.314302 ACGCTGCTAACTTCTCACGT 59.686 50.000 0.00 0.00 0.00 4.49
2004 2091 0.985549 CGCTGCTAACTTCTCACGTC 59.014 55.000 0.00 0.00 0.00 4.34
2005 2092 1.666023 CGCTGCTAACTTCTCACGTCA 60.666 52.381 0.00 0.00 0.00 4.35
2006 2093 1.721926 GCTGCTAACTTCTCACGTCAC 59.278 52.381 0.00 0.00 0.00 3.67
2007 2094 2.608261 GCTGCTAACTTCTCACGTCACT 60.608 50.000 0.00 0.00 0.00 3.41
2008 2095 3.366070 GCTGCTAACTTCTCACGTCACTA 60.366 47.826 0.00 0.00 0.00 2.74
2009 2096 4.156664 TGCTAACTTCTCACGTCACTAC 57.843 45.455 0.00 0.00 0.00 2.73
2010 2097 3.057736 TGCTAACTTCTCACGTCACTACC 60.058 47.826 0.00 0.00 0.00 3.18
2011 2098 3.190953 GCTAACTTCTCACGTCACTACCT 59.809 47.826 0.00 0.00 0.00 3.08
2012 2099 4.394300 GCTAACTTCTCACGTCACTACCTA 59.606 45.833 0.00 0.00 0.00 3.08
2013 2100 4.762956 AACTTCTCACGTCACTACCTAC 57.237 45.455 0.00 0.00 0.00 3.18
2014 2101 4.018484 ACTTCTCACGTCACTACCTACT 57.982 45.455 0.00 0.00 0.00 2.57
2015 2102 3.752222 ACTTCTCACGTCACTACCTACTG 59.248 47.826 0.00 0.00 0.00 2.74
2016 2103 3.690475 TCTCACGTCACTACCTACTGA 57.310 47.619 0.00 0.00 0.00 3.41
2034 2121 5.041191 ACTGAAAAGAAGTCCACATCACT 57.959 39.130 0.00 0.00 0.00 3.41
2040 2127 1.902508 GAAGTCCACATCACTCCCTGA 59.097 52.381 0.00 0.00 0.00 3.86
2072 2159 1.424638 CGACTAATCCACCCCCTCAT 58.575 55.000 0.00 0.00 0.00 2.90
2082 2169 3.660669 TCCACCCCCTCATCTTTAAAACT 59.339 43.478 0.00 0.00 0.00 2.66
2101 2188 4.866327 ACTGGTTAATTAATCCCCCGAA 57.134 40.909 6.01 0.00 0.00 4.30
2178 2268 0.661483 GTTTTGCTTGCGTGGCTCTC 60.661 55.000 0.00 0.00 0.00 3.20
2245 2716 2.644992 GGCCGCTGGTTGTTCTTG 59.355 61.111 0.00 0.00 0.00 3.02
2318 2801 2.668632 CCACCCGGCTGAAGCTAA 59.331 61.111 0.00 0.00 41.70 3.09
2319 2802 1.450312 CCACCCGGCTGAAGCTAAG 60.450 63.158 0.00 0.00 41.70 2.18
2324 2807 1.293924 CCGGCTGAAGCTAAGATGTG 58.706 55.000 1.74 0.00 41.70 3.21
2330 2813 2.086869 TGAAGCTAAGATGTGCCTTGC 58.913 47.619 0.00 0.00 0.00 4.01
2337 2820 1.273759 AGATGTGCCTTGCTCTCTGA 58.726 50.000 0.00 0.00 0.00 3.27
2348 2831 3.113191 TGCTCTCTGATTCCTCTCCTT 57.887 47.619 0.00 0.00 0.00 3.36
2390 2873 2.355599 CTCTGCTCGCCGCCATAG 60.356 66.667 0.00 0.00 38.05 2.23
2391 2874 4.592192 TCTGCTCGCCGCCATAGC 62.592 66.667 1.09 1.09 38.05 2.97
2401 2884 4.937431 GCCATAGCCGCCCACCTC 62.937 72.222 0.00 0.00 0.00 3.85
2402 2885 4.256180 CCATAGCCGCCCACCTCC 62.256 72.222 0.00 0.00 0.00 4.30
2403 2886 3.479203 CATAGCCGCCCACCTCCA 61.479 66.667 0.00 0.00 0.00 3.86
2404 2887 2.448542 ATAGCCGCCCACCTCCAT 60.449 61.111 0.00 0.00 0.00 3.41
2405 2888 1.152118 ATAGCCGCCCACCTCCATA 60.152 57.895 0.00 0.00 0.00 2.74
2406 2889 1.194781 ATAGCCGCCCACCTCCATAG 61.195 60.000 0.00 0.00 0.00 2.23
2407 2890 2.599139 TAGCCGCCCACCTCCATAGT 62.599 60.000 0.00 0.00 0.00 2.12
2408 2891 3.043999 GCCGCCCACCTCCATAGTT 62.044 63.158 0.00 0.00 0.00 2.24
2411 2894 1.338136 CGCCCACCTCCATAGTTCCT 61.338 60.000 0.00 0.00 0.00 3.36
2412 2895 0.470341 GCCCACCTCCATAGTTCCTC 59.530 60.000 0.00 0.00 0.00 3.71
2414 2897 1.132500 CCACCTCCATAGTTCCTCCC 58.868 60.000 0.00 0.00 0.00 4.30
2415 2898 1.132500 CACCTCCATAGTTCCTCCCC 58.868 60.000 0.00 0.00 0.00 4.81
2416 2899 0.029989 ACCTCCATAGTTCCTCCCCC 60.030 60.000 0.00 0.00 0.00 5.40
2489 2972 3.958147 CTCGCCATGGCTGAACGGT 62.958 63.158 33.07 0.00 39.32 4.83
2491 2974 2.672996 GCCATGGCTGAACGGTGT 60.673 61.111 29.98 0.00 38.26 4.16
2495 2978 0.673333 CATGGCTGAACGGTGTAGCA 60.673 55.000 15.77 5.72 39.15 3.49
2529 3013 5.241403 TGGAGTTCCTGTTTGATGTACAT 57.759 39.130 8.43 8.43 36.82 2.29
2530 3014 5.630121 TGGAGTTCCTGTTTGATGTACATT 58.370 37.500 10.30 0.00 36.82 2.71
2531 3015 5.473162 TGGAGTTCCTGTTTGATGTACATTG 59.527 40.000 10.30 0.00 36.82 2.82
2532 3016 5.473504 GGAGTTCCTGTTTGATGTACATTGT 59.526 40.000 10.30 0.00 0.00 2.71
2533 3017 6.317789 AGTTCCTGTTTGATGTACATTGTG 57.682 37.500 10.30 0.00 0.00 3.33
2534 3018 6.061441 AGTTCCTGTTTGATGTACATTGTGA 58.939 36.000 10.30 0.00 0.00 3.58
2535 3019 5.940192 TCCTGTTTGATGTACATTGTGAC 57.060 39.130 10.30 7.57 0.00 3.67
2536 3020 5.620206 TCCTGTTTGATGTACATTGTGACT 58.380 37.500 10.30 0.00 0.00 3.41
2552 3036 8.999431 ACATTGTGACTTCGTGAGTATTAATTT 58.001 29.630 0.00 0.00 39.19 1.82
2564 3048 7.332430 CGTGAGTATTAATTTGGGACAGTACAA 59.668 37.037 0.00 0.00 42.39 2.41
2595 3079 9.397280 AGATATACTGAACTTTAAGCCTTTTCC 57.603 33.333 0.00 0.00 0.00 3.13
2596 3080 9.397280 GATATACTGAACTTTAAGCCTTTTCCT 57.603 33.333 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
114 115 1.004440 GCGCAACCTCTTCCTCACT 60.004 57.895 0.30 0.00 0.00 3.41
200 201 3.119096 GTTGGCGCGGAGAGTTCC 61.119 66.667 8.83 0.00 40.33 3.62
297 298 0.036732 TCAGCCTGACATGTTCACCC 59.963 55.000 0.00 0.00 0.00 4.61
324 325 2.561419 AGTAAAGCACTTCTGCCGTCTA 59.439 45.455 0.00 0.00 45.53 2.59
427 428 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
448 449 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
449 450 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
451 452 9.733219 GATAACTAAAGTAGTGATCTAAACGCT 57.267 33.333 5.75 0.00 41.55 5.07
571 643 2.743938 CGTGGGACCTATCAGAAATCG 58.256 52.381 0.00 0.00 0.00 3.34
628 700 2.019984 GGGATGGTTGATCTTCAGTGC 58.980 52.381 0.00 0.00 0.00 4.40
656 728 7.693969 ATCGGAATCTTCTGAATCAGTTTTT 57.306 32.000 10.36 0.78 45.01 1.94
729 801 3.414700 GTCGAACGGGTGCAGCTG 61.415 66.667 22.87 22.87 0.00 4.24
857 929 7.593273 CCGCACATAGATTAAACAGAACAAAAA 59.407 33.333 0.00 0.00 0.00 1.94
931 1003 5.600898 ACTACCCTGGCATAACAAAACTTTT 59.399 36.000 0.00 0.00 0.00 2.27
934 1006 4.382386 ACTACCCTGGCATAACAAAACT 57.618 40.909 0.00 0.00 0.00 2.66
935 1007 5.462530 AAACTACCCTGGCATAACAAAAC 57.537 39.130 0.00 0.00 0.00 2.43
977 1049 1.989706 TCCCCTGTTGGTAAAAGTGC 58.010 50.000 0.00 0.00 0.00 4.40
985 1057 0.324645 GGCATTCATCCCCTGTTGGT 60.325 55.000 0.00 0.00 0.00 3.67
1030 1102 6.307318 TCTTCACGTATTCGAGAAAAGTAAGC 59.693 38.462 6.14 0.00 43.37 3.09
1039 1111 5.236695 CCTCAGTATCTTCACGTATTCGAGA 59.763 44.000 0.00 0.00 40.62 4.04
1040 1112 5.236695 TCCTCAGTATCTTCACGTATTCGAG 59.763 44.000 0.00 0.00 40.62 4.04
1041 1113 5.121105 TCCTCAGTATCTTCACGTATTCGA 58.879 41.667 0.00 0.00 40.62 3.71
1042 1114 5.419760 TCCTCAGTATCTTCACGTATTCG 57.580 43.478 0.00 0.00 43.34 3.34
1043 1115 6.971602 TCATCCTCAGTATCTTCACGTATTC 58.028 40.000 0.00 0.00 0.00 1.75
1044 1116 6.961360 TCATCCTCAGTATCTTCACGTATT 57.039 37.500 0.00 0.00 0.00 1.89
1045 1117 6.717084 TGATCATCCTCAGTATCTTCACGTAT 59.283 38.462 0.00 0.00 0.00 3.06
1046 1118 6.062095 TGATCATCCTCAGTATCTTCACGTA 58.938 40.000 0.00 0.00 0.00 3.57
1047 1119 4.889995 TGATCATCCTCAGTATCTTCACGT 59.110 41.667 0.00 0.00 0.00 4.49
1048 1120 5.444663 TGATCATCCTCAGTATCTTCACG 57.555 43.478 0.00 0.00 0.00 4.35
1049 1121 5.638657 GCATGATCATCCTCAGTATCTTCAC 59.361 44.000 4.86 0.00 0.00 3.18
1050 1122 5.543020 AGCATGATCATCCTCAGTATCTTCA 59.457 40.000 4.86 0.00 0.00 3.02
1098 1170 2.254546 ACAGTTTGATCTTGTGCGGA 57.745 45.000 0.00 0.00 0.00 5.54
1104 1176 2.095567 CCAGGCGAACAGTTTGATCTTG 60.096 50.000 4.52 0.00 0.00 3.02
1107 1179 0.169009 GCCAGGCGAACAGTTTGATC 59.831 55.000 4.52 0.00 0.00 2.92
1108 1180 0.250901 AGCCAGGCGAACAGTTTGAT 60.251 50.000 5.55 0.00 0.00 2.57
1119 1191 4.093952 CGAAACAGCAGCCAGGCG 62.094 66.667 5.55 1.99 39.27 5.52
1122 1194 4.093952 CCGCGAAACAGCAGCCAG 62.094 66.667 8.23 0.00 36.85 4.85
1131 1203 1.131218 GTTTAGTCGGCCGCGAAAC 59.869 57.895 27.62 27.62 0.00 2.78
1134 1206 2.431260 GTGTTTAGTCGGCCGCGA 60.431 61.111 23.51 9.45 0.00 5.87
1135 1207 3.484547 GGTGTTTAGTCGGCCGCG 61.485 66.667 23.51 0.00 0.00 6.46
1137 1209 2.812178 CGGGTGTTTAGTCGGCCG 60.812 66.667 22.12 22.12 0.00 6.13
1140 1212 0.881159 TTGCACGGGTGTTTAGTCGG 60.881 55.000 0.25 0.00 0.00 4.79
1143 1215 1.026584 GGTTTGCACGGGTGTTTAGT 58.973 50.000 0.25 0.00 0.00 2.24
1149 1221 2.551912 GGACAGGTTTGCACGGGTG 61.552 63.158 0.00 0.00 0.00 4.61
1152 1224 0.817634 TGAAGGACAGGTTTGCACGG 60.818 55.000 0.00 0.00 0.00 4.94
1155 1227 2.165437 GTGTTTGAAGGACAGGTTTGCA 59.835 45.455 0.00 0.00 0.00 4.08
1161 1233 2.862541 TCCATGTGTTTGAAGGACAGG 58.137 47.619 0.00 0.00 0.00 4.00
1167 1239 4.421058 CAGCATCATCCATGTGTTTGAAG 58.579 43.478 0.00 0.00 34.56 3.02
1176 1248 0.823769 AGCTGGCAGCATCATCCATG 60.824 55.000 38.09 0.00 45.56 3.66
1180 1252 2.722487 GCAGCTGGCAGCATCATC 59.278 61.111 38.09 19.00 45.56 2.92
1181 1253 2.833582 GGCAGCTGGCAGCATCAT 60.834 61.111 38.09 17.61 45.56 2.45
1191 1263 1.227764 AGCATATCGTGGGCAGCTG 60.228 57.895 10.11 10.11 0.00 4.24
1197 1269 2.281761 GGGCCAGCATATCGTGGG 60.282 66.667 4.39 0.00 34.06 4.61
1200 1272 1.460305 AGAGGGGCCAGCATATCGT 60.460 57.895 4.39 0.00 0.00 3.73
1205 1277 1.617536 TCTTCAGAGGGGCCAGCAT 60.618 57.895 4.39 0.00 0.00 3.79
1213 1285 1.248486 TGAGTCGTGTCTTCAGAGGG 58.752 55.000 0.00 0.00 0.00 4.30
1227 1299 5.445142 CGTACAAGCAATGAACAGATGAGTC 60.445 44.000 0.00 0.00 0.00 3.36
1245 1317 0.249531 TCTGCAGAAACCGCGTACAA 60.250 50.000 15.67 0.00 0.00 2.41
1248 1320 1.463056 CAAATCTGCAGAAACCGCGTA 59.537 47.619 22.50 0.00 0.00 4.42
1249 1321 0.238289 CAAATCTGCAGAAACCGCGT 59.762 50.000 22.50 0.00 0.00 6.01
1255 1327 0.178938 TGGCCCCAAATCTGCAGAAA 60.179 50.000 22.50 0.00 0.00 2.52
1256 1328 0.178938 TTGGCCCCAAATCTGCAGAA 60.179 50.000 22.50 4.23 32.44 3.02
1257 1329 0.899717 GTTGGCCCCAAATCTGCAGA 60.900 55.000 20.79 20.79 37.70 4.26
1258 1330 0.901580 AGTTGGCCCCAAATCTGCAG 60.902 55.000 7.63 7.63 37.70 4.41
1272 1344 2.572104 AGTAGTGGAAAGGCCTAGTTGG 59.428 50.000 5.16 0.00 37.63 3.77
1275 1347 2.468915 GGAGTAGTGGAAAGGCCTAGT 58.531 52.381 5.16 0.00 37.63 2.57
1284 1356 1.132657 TGGAACCTGGGAGTAGTGGAA 60.133 52.381 0.00 0.00 0.00 3.53
1288 1360 0.790993 TCCTGGAACCTGGGAGTAGT 59.209 55.000 15.00 0.00 35.98 2.73
1293 1365 2.694397 CATAGATCCTGGAACCTGGGA 58.306 52.381 15.00 11.34 35.98 4.37
1325 1397 3.729965 CTGTCTAGCTGCTGCGGGG 62.730 68.421 13.43 4.74 45.42 5.73
1326 1398 2.202851 CTGTCTAGCTGCTGCGGG 60.203 66.667 13.43 7.16 45.42 6.13
1338 1410 2.673523 GGCCAGACCATGCTGTCT 59.326 61.111 0.00 0.00 46.35 3.41
1342 1414 3.329889 TTCCGGCCAGACCATGCT 61.330 61.111 2.24 0.00 39.03 3.79
1346 1418 4.329545 GCACTTCCGGCCAGACCA 62.330 66.667 2.24 0.00 39.03 4.02
1350 1422 1.153549 GAGTAGCACTTCCGGCCAG 60.154 63.158 2.24 0.00 0.00 4.85
1359 1431 1.069159 CAGTGAACGACGAGTAGCACT 60.069 52.381 0.00 13.63 44.28 4.40
1365 1437 1.315690 TCTTCCAGTGAACGACGAGT 58.684 50.000 0.00 0.00 0.00 4.18
1368 1440 2.157668 CCAAATCTTCCAGTGAACGACG 59.842 50.000 0.00 0.00 0.00 5.12
1374 1446 2.305927 GGAGTCCCAAATCTTCCAGTGA 59.694 50.000 0.00 0.00 0.00 3.41
1375 1447 2.619074 GGGAGTCCCAAATCTTCCAGTG 60.619 54.545 24.35 0.00 44.65 3.66
1376 1448 1.636003 GGGAGTCCCAAATCTTCCAGT 59.364 52.381 24.35 0.00 44.65 4.00
1377 1449 1.407437 CGGGAGTCCCAAATCTTCCAG 60.407 57.143 28.08 3.47 45.83 3.86
1382 1454 1.338769 CGTTTCGGGAGTCCCAAATCT 60.339 52.381 28.08 0.00 45.83 2.40
1384 1456 0.958876 GCGTTTCGGGAGTCCCAAAT 60.959 55.000 28.08 0.00 45.83 2.32
1390 1462 2.048127 AGCAGCGTTTCGGGAGTC 60.048 61.111 0.00 0.00 0.00 3.36
1395 1467 1.493311 GAAGACAGCAGCGTTTCGG 59.507 57.895 0.00 0.00 0.00 4.30
1398 1470 0.814010 AACGGAAGACAGCAGCGTTT 60.814 50.000 0.00 0.00 0.00 3.60
1410 1482 4.390297 GGAGAGTGATCTTCAAAACGGAAG 59.610 45.833 0.00 0.00 44.46 3.46
1413 1485 3.929610 GAGGAGAGTGATCTTCAAAACGG 59.070 47.826 0.00 0.00 0.00 4.44
1416 1488 4.873746 ACGAGGAGAGTGATCTTCAAAA 57.126 40.909 0.00 0.00 0.00 2.44
1418 1490 4.590918 AGTACGAGGAGAGTGATCTTCAA 58.409 43.478 0.00 0.00 0.00 2.69
1425 1497 3.928005 ATGGTAGTACGAGGAGAGTGA 57.072 47.619 0.00 0.00 0.00 3.41
1432 1504 4.713824 TGTTCTGAATGGTAGTACGAGG 57.286 45.455 0.00 0.00 0.00 4.63
1437 1509 8.590204 TCACTTACAATGTTCTGAATGGTAGTA 58.410 33.333 0.00 0.00 0.00 1.82
1460 1532 3.585862 TGCGAGAATAACTCAAGGTCAC 58.414 45.455 0.00 0.00 45.14 3.67
1465 1537 3.119291 AGCGATGCGAGAATAACTCAAG 58.881 45.455 0.00 0.00 45.14 3.02
1471 1543 5.183014 TCTCTAAAGCGATGCGAGAATAA 57.817 39.130 0.00 0.00 0.00 1.40
1473 1545 3.717400 TCTCTAAAGCGATGCGAGAAT 57.283 42.857 0.00 0.00 0.00 2.40
1479 1551 1.797635 GCAGGATCTCTAAAGCGATGC 59.202 52.381 0.00 0.00 0.00 3.91
1482 1554 2.294791 GCTAGCAGGATCTCTAAAGCGA 59.705 50.000 10.63 0.00 0.00 4.93
1485 1557 3.652274 GCAGCTAGCAGGATCTCTAAAG 58.348 50.000 18.83 0.00 44.79 1.85
1486 1558 3.742433 GCAGCTAGCAGGATCTCTAAA 57.258 47.619 18.83 0.00 44.79 1.85
1509 1589 3.945921 GGTAAGATAACCAAGCCAAGACC 59.054 47.826 0.00 0.00 39.50 3.85
1511 1591 4.919774 TGGTAAGATAACCAAGCCAAGA 57.080 40.909 0.00 0.00 46.55 3.02
1520 1600 1.669265 GGCAAGCGTGGTAAGATAACC 59.331 52.381 0.79 0.00 40.19 2.85
1522 1602 1.066716 ACGGCAAGCGTGGTAAGATAA 60.067 47.619 0.79 0.00 0.00 1.75
1525 1605 1.666553 CACGGCAAGCGTGGTAAGA 60.667 57.895 0.79 0.00 34.13 2.10
1539 1622 2.684001 TACAGATTACAAGGGCACGG 57.316 50.000 0.00 0.00 0.00 4.94
1545 1628 6.480320 GCAGTGGTAGATTACAGATTACAAGG 59.520 42.308 0.00 0.00 0.00 3.61
1602 1685 3.776196 CGGAGGAGTCCCCATCTAT 57.224 57.895 5.25 0.00 40.20 1.98
1650 1737 5.944049 AATATAAAGTACGCACACTCGTG 57.056 39.130 0.00 0.00 46.56 4.35
1651 1738 8.777413 TCTATAATATAAAGTACGCACACTCGT 58.223 33.333 0.00 0.00 45.49 4.18
1652 1739 9.603298 TTCTATAATATAAAGTACGCACACTCG 57.397 33.333 0.00 0.00 0.00 4.18
1663 1750 9.777008 CCCCCTCTCTCTTCTATAATATAAAGT 57.223 37.037 0.00 0.00 0.00 2.66
1664 1751 9.777008 ACCCCCTCTCTCTTCTATAATATAAAG 57.223 37.037 0.00 0.00 0.00 1.85
1668 1755 9.777008 CTTTACCCCCTCTCTCTTCTATAATAT 57.223 37.037 0.00 0.00 0.00 1.28
1669 1756 8.967577 TCTTTACCCCCTCTCTCTTCTATAATA 58.032 37.037 0.00 0.00 0.00 0.98
1670 1757 7.838241 TCTTTACCCCCTCTCTCTTCTATAAT 58.162 38.462 0.00 0.00 0.00 1.28
1671 1758 7.235159 TCTTTACCCCCTCTCTCTTCTATAA 57.765 40.000 0.00 0.00 0.00 0.98
1672 1759 6.694608 GCTCTTTACCCCCTCTCTCTTCTATA 60.695 46.154 0.00 0.00 0.00 1.31
1673 1760 5.711698 CTCTTTACCCCCTCTCTCTTCTAT 58.288 45.833 0.00 0.00 0.00 1.98
1674 1761 4.631664 GCTCTTTACCCCCTCTCTCTTCTA 60.632 50.000 0.00 0.00 0.00 2.10
1675 1762 3.884123 GCTCTTTACCCCCTCTCTCTTCT 60.884 52.174 0.00 0.00 0.00 2.85
1676 1763 2.432874 GCTCTTTACCCCCTCTCTCTTC 59.567 54.545 0.00 0.00 0.00 2.87
1677 1764 2.473070 GCTCTTTACCCCCTCTCTCTT 58.527 52.381 0.00 0.00 0.00 2.85
1678 1765 1.343580 GGCTCTTTACCCCCTCTCTCT 60.344 57.143 0.00 0.00 0.00 3.10
1679 1766 1.124780 GGCTCTTTACCCCCTCTCTC 58.875 60.000 0.00 0.00 0.00 3.20
1680 1767 0.326713 GGGCTCTTTACCCCCTCTCT 60.327 60.000 0.00 0.00 42.01 3.10
1681 1768 2.222885 GGGCTCTTTACCCCCTCTC 58.777 63.158 0.00 0.00 42.01 3.20
1682 1769 4.502106 GGGCTCTTTACCCCCTCT 57.498 61.111 0.00 0.00 42.01 3.69
1688 1775 2.025321 TGAAATGGAGGGGCTCTTTACC 60.025 50.000 0.00 0.00 0.00 2.85
1689 1776 3.282885 CTGAAATGGAGGGGCTCTTTAC 58.717 50.000 0.00 0.00 0.00 2.01
1690 1777 2.919602 ACTGAAATGGAGGGGCTCTTTA 59.080 45.455 0.00 0.00 0.00 1.85
1691 1778 1.713078 ACTGAAATGGAGGGGCTCTTT 59.287 47.619 0.00 0.00 0.00 2.52
1692 1779 1.283321 GACTGAAATGGAGGGGCTCTT 59.717 52.381 0.00 0.00 0.00 2.85
1693 1780 0.915364 GACTGAAATGGAGGGGCTCT 59.085 55.000 0.00 0.00 0.00 4.09
1694 1781 0.620556 TGACTGAAATGGAGGGGCTC 59.379 55.000 0.00 0.00 0.00 4.70
1695 1782 0.622665 CTGACTGAAATGGAGGGGCT 59.377 55.000 0.00 0.00 0.00 5.19
1696 1783 1.034292 GCTGACTGAAATGGAGGGGC 61.034 60.000 0.00 0.00 0.00 5.80
1697 1784 0.329261 TGCTGACTGAAATGGAGGGG 59.671 55.000 0.00 0.00 0.00 4.79
1698 1785 2.431954 ATGCTGACTGAAATGGAGGG 57.568 50.000 0.00 0.00 0.00 4.30
1699 1786 6.528321 TCTAATATGCTGACTGAAATGGAGG 58.472 40.000 0.00 0.00 0.00 4.30
1700 1787 8.618702 ATTCTAATATGCTGACTGAAATGGAG 57.381 34.615 0.00 0.00 0.00 3.86
1701 1788 8.985315 AATTCTAATATGCTGACTGAAATGGA 57.015 30.769 0.00 0.00 0.00 3.41
1702 1789 9.064706 AGAATTCTAATATGCTGACTGAAATGG 57.935 33.333 6.06 0.00 0.00 3.16
1705 1792 9.322773 CAGAGAATTCTAATATGCTGACTGAAA 57.677 33.333 8.25 0.00 30.73 2.69
1706 1793 8.699130 TCAGAGAATTCTAATATGCTGACTGAA 58.301 33.333 8.25 0.00 30.73 3.02
1707 1794 8.242729 TCAGAGAATTCTAATATGCTGACTGA 57.757 34.615 8.25 9.65 30.73 3.41
1708 1795 8.883954 TTCAGAGAATTCTAATATGCTGACTG 57.116 34.615 17.36 12.24 31.60 3.51
1709 1796 8.703743 ACTTCAGAGAATTCTAATATGCTGACT 58.296 33.333 17.36 7.19 31.60 3.41
1710 1797 8.885494 ACTTCAGAGAATTCTAATATGCTGAC 57.115 34.615 17.36 0.00 31.60 3.51
1711 1798 8.699130 TGACTTCAGAGAATTCTAATATGCTGA 58.301 33.333 8.25 12.44 30.73 4.26
1712 1799 8.883954 TGACTTCAGAGAATTCTAATATGCTG 57.116 34.615 8.25 10.28 30.73 4.41
1713 1800 9.896645 TTTGACTTCAGAGAATTCTAATATGCT 57.103 29.630 8.25 0.00 30.73 3.79
1769 1856 6.229936 AGCATGGCAGATGTTGATATTTTT 57.770 33.333 0.00 0.00 0.00 1.94
1770 1857 5.864418 AGCATGGCAGATGTTGATATTTT 57.136 34.783 0.00 0.00 0.00 1.82
1771 1858 6.964807 TTAGCATGGCAGATGTTGATATTT 57.035 33.333 0.00 0.00 0.00 1.40
1772 1859 6.548622 ACTTTAGCATGGCAGATGTTGATATT 59.451 34.615 0.00 0.00 0.00 1.28
1773 1860 6.066690 ACTTTAGCATGGCAGATGTTGATAT 58.933 36.000 0.00 0.00 0.00 1.63
1774 1861 5.439721 ACTTTAGCATGGCAGATGTTGATA 58.560 37.500 0.00 0.00 0.00 2.15
1775 1862 4.275810 ACTTTAGCATGGCAGATGTTGAT 58.724 39.130 0.00 0.00 0.00 2.57
1776 1863 3.689347 ACTTTAGCATGGCAGATGTTGA 58.311 40.909 0.00 0.00 0.00 3.18
1777 1864 4.445452 AACTTTAGCATGGCAGATGTTG 57.555 40.909 0.00 0.00 0.00 3.33
1778 1865 9.573166 TTATATAACTTTAGCATGGCAGATGTT 57.427 29.630 0.00 0.00 0.00 2.71
1779 1866 9.745018 ATTATATAACTTTAGCATGGCAGATGT 57.255 29.630 0.00 0.00 0.00 3.06
1805 1892 9.725019 AGATGTGTCATGACTTAAAGTTTCATA 57.275 29.630 25.55 1.27 0.00 2.15
1806 1893 8.627208 AGATGTGTCATGACTTAAAGTTTCAT 57.373 30.769 25.55 14.42 0.00 2.57
1807 1894 9.208022 CTAGATGTGTCATGACTTAAAGTTTCA 57.792 33.333 25.55 11.05 0.00 2.69
1808 1895 9.209175 ACTAGATGTGTCATGACTTAAAGTTTC 57.791 33.333 25.55 11.27 0.00 2.78
1809 1896 8.993121 CACTAGATGTGTCATGACTTAAAGTTT 58.007 33.333 25.55 7.45 41.53 2.66
1810 1897 8.539770 CACTAGATGTGTCATGACTTAAAGTT 57.460 34.615 25.55 8.77 41.53 2.66
1832 1919 9.912634 CATTCACAACCTAAAAATCAATACACT 57.087 29.630 0.00 0.00 0.00 3.55
1833 1920 9.691362 ACATTCACAACCTAAAAATCAATACAC 57.309 29.630 0.00 0.00 0.00 2.90
1837 1924 9.260002 GTCAACATTCACAACCTAAAAATCAAT 57.740 29.630 0.00 0.00 0.00 2.57
1838 1925 8.253810 TGTCAACATTCACAACCTAAAAATCAA 58.746 29.630 0.00 0.00 0.00 2.57
1839 1926 7.704472 GTGTCAACATTCACAACCTAAAAATCA 59.296 33.333 0.00 0.00 35.04 2.57
1840 1927 7.920682 AGTGTCAACATTCACAACCTAAAAATC 59.079 33.333 0.00 0.00 37.07 2.17
1841 1928 7.781056 AGTGTCAACATTCACAACCTAAAAAT 58.219 30.769 0.00 0.00 37.07 1.82
1842 1929 7.164230 AGTGTCAACATTCACAACCTAAAAA 57.836 32.000 0.00 0.00 37.07 1.94
1843 1930 6.767524 AGTGTCAACATTCACAACCTAAAA 57.232 33.333 0.00 0.00 37.07 1.52
1844 1931 6.767524 AAGTGTCAACATTCACAACCTAAA 57.232 33.333 0.00 0.00 37.07 1.85
1845 1932 6.767524 AAAGTGTCAACATTCACAACCTAA 57.232 33.333 0.00 0.00 37.07 2.69
1846 1933 6.767524 AAAAGTGTCAACATTCACAACCTA 57.232 33.333 0.00 0.00 37.07 3.08
1847 1934 5.659440 AAAAGTGTCAACATTCACAACCT 57.341 34.783 0.00 0.00 37.07 3.50
1867 1954 6.524101 AGTTTGACCAGCTTTGTAGAAAAA 57.476 33.333 0.00 0.00 0.00 1.94
1868 1955 6.524101 AAGTTTGACCAGCTTTGTAGAAAA 57.476 33.333 0.00 0.00 0.00 2.29
1869 1956 6.524101 AAAGTTTGACCAGCTTTGTAGAAA 57.476 33.333 0.00 0.00 32.03 2.52
1870 1957 6.238266 CGTAAAGTTTGACCAGCTTTGTAGAA 60.238 38.462 0.00 0.00 34.69 2.10
1871 1958 5.235616 CGTAAAGTTTGACCAGCTTTGTAGA 59.764 40.000 0.00 0.00 34.69 2.59
1872 1959 5.235616 TCGTAAAGTTTGACCAGCTTTGTAG 59.764 40.000 0.00 0.00 34.69 2.74
1873 1960 5.117584 TCGTAAAGTTTGACCAGCTTTGTA 58.882 37.500 0.00 0.00 34.69 2.41
1874 1961 3.942748 TCGTAAAGTTTGACCAGCTTTGT 59.057 39.130 0.00 0.00 34.69 2.83
1875 1962 4.527564 CTCGTAAAGTTTGACCAGCTTTG 58.472 43.478 0.00 0.00 34.69 2.77
1876 1963 3.564225 CCTCGTAAAGTTTGACCAGCTTT 59.436 43.478 0.00 0.00 36.54 3.51
1877 1964 3.139077 CCTCGTAAAGTTTGACCAGCTT 58.861 45.455 0.00 0.00 0.00 3.74
1878 1965 2.767505 CCTCGTAAAGTTTGACCAGCT 58.232 47.619 0.00 0.00 0.00 4.24
1879 1966 1.197036 GCCTCGTAAAGTTTGACCAGC 59.803 52.381 0.00 0.00 0.00 4.85
1880 1967 2.767505 AGCCTCGTAAAGTTTGACCAG 58.232 47.619 0.00 0.00 0.00 4.00
1881 1968 2.922740 AGCCTCGTAAAGTTTGACCA 57.077 45.000 0.00 0.00 0.00 4.02
1882 1969 4.753610 AGTTAAGCCTCGTAAAGTTTGACC 59.246 41.667 0.00 0.00 0.00 4.02
1883 1970 5.919272 AGTTAAGCCTCGTAAAGTTTGAC 57.081 39.130 0.00 0.00 0.00 3.18
1884 1971 6.050432 TGAAGTTAAGCCTCGTAAAGTTTGA 58.950 36.000 0.00 0.00 0.00 2.69
1885 1972 6.018180 ACTGAAGTTAAGCCTCGTAAAGTTTG 60.018 38.462 0.00 0.00 0.00 2.93
1886 1973 6.053650 ACTGAAGTTAAGCCTCGTAAAGTTT 58.946 36.000 0.00 0.00 0.00 2.66
1887 1974 5.608449 ACTGAAGTTAAGCCTCGTAAAGTT 58.392 37.500 0.00 0.00 0.00 2.66
1888 1975 5.211174 ACTGAAGTTAAGCCTCGTAAAGT 57.789 39.130 0.00 0.00 0.00 2.66
1889 1976 5.227908 TGACTGAAGTTAAGCCTCGTAAAG 58.772 41.667 0.00 0.00 0.00 1.85
1890 1977 5.204409 TGACTGAAGTTAAGCCTCGTAAA 57.796 39.130 0.00 0.00 0.00 2.01
1891 1978 4.859304 TGACTGAAGTTAAGCCTCGTAA 57.141 40.909 0.00 0.00 0.00 3.18
1892 1979 4.859304 TTGACTGAAGTTAAGCCTCGTA 57.141 40.909 0.00 0.00 0.00 3.43
1893 1980 3.746045 TTGACTGAAGTTAAGCCTCGT 57.254 42.857 0.00 0.00 0.00 4.18
1894 1981 4.932200 AGATTTGACTGAAGTTAAGCCTCG 59.068 41.667 0.00 0.00 0.00 4.63
1895 1982 6.809630 AAGATTTGACTGAAGTTAAGCCTC 57.190 37.500 0.00 0.00 0.00 4.70
1898 1985 9.657121 GCATATAAGATTTGACTGAAGTTAAGC 57.343 33.333 0.00 0.00 0.00 3.09
1902 1989 9.846248 GTTTGCATATAAGATTTGACTGAAGTT 57.154 29.630 0.00 0.00 0.00 2.66
1903 1990 9.236006 AGTTTGCATATAAGATTTGACTGAAGT 57.764 29.630 0.00 0.00 0.00 3.01
1914 2001 8.621286 CGGTCCTTTTTAGTTTGCATATAAGAT 58.379 33.333 0.00 0.00 0.00 2.40
1915 2002 7.066525 CCGGTCCTTTTTAGTTTGCATATAAGA 59.933 37.037 0.00 0.00 0.00 2.10
1916 2003 7.066525 TCCGGTCCTTTTTAGTTTGCATATAAG 59.933 37.037 0.00 0.00 0.00 1.73
1917 2004 6.885376 TCCGGTCCTTTTTAGTTTGCATATAA 59.115 34.615 0.00 0.00 0.00 0.98
1918 2005 6.416415 TCCGGTCCTTTTTAGTTTGCATATA 58.584 36.000 0.00 0.00 0.00 0.86
1919 2006 5.258051 TCCGGTCCTTTTTAGTTTGCATAT 58.742 37.500 0.00 0.00 0.00 1.78
1920 2007 4.653868 TCCGGTCCTTTTTAGTTTGCATA 58.346 39.130 0.00 0.00 0.00 3.14
1921 2008 3.492337 TCCGGTCCTTTTTAGTTTGCAT 58.508 40.909 0.00 0.00 0.00 3.96
1922 2009 2.882137 CTCCGGTCCTTTTTAGTTTGCA 59.118 45.455 0.00 0.00 0.00 4.08
1923 2010 2.228103 CCTCCGGTCCTTTTTAGTTTGC 59.772 50.000 0.00 0.00 0.00 3.68
1924 2011 2.817844 CCCTCCGGTCCTTTTTAGTTTG 59.182 50.000 0.00 0.00 0.00 2.93
1925 2012 2.712627 TCCCTCCGGTCCTTTTTAGTTT 59.287 45.455 0.00 0.00 0.00 2.66
1926 2013 2.305052 CTCCCTCCGGTCCTTTTTAGTT 59.695 50.000 0.00 0.00 0.00 2.24
1927 2014 1.907255 CTCCCTCCGGTCCTTTTTAGT 59.093 52.381 0.00 0.00 0.00 2.24
1928 2015 1.907255 ACTCCCTCCGGTCCTTTTTAG 59.093 52.381 0.00 0.00 0.00 1.85
1929 2016 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
1930 2017 1.627329 GTACTCCCTCCGGTCCTTTTT 59.373 52.381 0.00 0.00 0.00 1.94
1931 2018 1.273759 GTACTCCCTCCGGTCCTTTT 58.726 55.000 0.00 0.00 0.00 2.27
1932 2019 0.115745 TGTACTCCCTCCGGTCCTTT 59.884 55.000 0.00 0.00 0.00 3.11
1933 2020 0.338814 ATGTACTCCCTCCGGTCCTT 59.661 55.000 0.00 0.00 0.00 3.36
1934 2021 1.229131 TATGTACTCCCTCCGGTCCT 58.771 55.000 0.00 0.00 0.00 3.85
1935 2022 2.305858 ATATGTACTCCCTCCGGTCC 57.694 55.000 0.00 0.00 0.00 4.46
1936 2023 5.356470 GTGTATATATGTACTCCCTCCGGTC 59.644 48.000 10.53 0.00 0.00 4.79
1937 2024 5.259632 GTGTATATATGTACTCCCTCCGGT 58.740 45.833 10.53 0.00 0.00 5.28
1938 2025 4.643784 GGTGTATATATGTACTCCCTCCGG 59.356 50.000 16.00 0.00 33.96 5.14
1939 2026 5.831702 GGTGTATATATGTACTCCCTCCG 57.168 47.826 16.00 0.00 33.96 4.63
1944 2031 7.871463 GTGAAGTTGGGTGTATATATGTACTCC 59.129 40.741 17.75 17.75 37.45 3.85
1945 2032 7.594015 CGTGAAGTTGGGTGTATATATGTACTC 59.406 40.741 10.53 7.07 0.00 2.59
1946 2033 7.431249 CGTGAAGTTGGGTGTATATATGTACT 58.569 38.462 10.53 0.00 0.00 2.73
1947 2034 6.145048 GCGTGAAGTTGGGTGTATATATGTAC 59.855 42.308 2.82 2.82 0.00 2.90
1948 2035 6.218019 GCGTGAAGTTGGGTGTATATATGTA 58.782 40.000 0.00 0.00 0.00 2.29
1949 2036 5.054477 GCGTGAAGTTGGGTGTATATATGT 58.946 41.667 0.00 0.00 0.00 2.29
1950 2037 4.149922 CGCGTGAAGTTGGGTGTATATATG 59.850 45.833 0.00 0.00 0.00 1.78
1951 2038 4.202182 ACGCGTGAAGTTGGGTGTATATAT 60.202 41.667 12.93 0.00 0.00 0.86
1952 2039 3.130869 ACGCGTGAAGTTGGGTGTATATA 59.869 43.478 12.93 0.00 0.00 0.86
1953 2040 2.093869 ACGCGTGAAGTTGGGTGTATAT 60.094 45.455 12.93 0.00 0.00 0.86
1954 2041 1.273048 ACGCGTGAAGTTGGGTGTATA 59.727 47.619 12.93 0.00 0.00 1.47
1955 2042 0.034337 ACGCGTGAAGTTGGGTGTAT 59.966 50.000 12.93 0.00 0.00 2.29
1956 2043 0.598158 GACGCGTGAAGTTGGGTGTA 60.598 55.000 20.70 0.00 0.00 2.90
1957 2044 1.885850 GACGCGTGAAGTTGGGTGT 60.886 57.895 20.70 0.00 0.00 4.16
1958 2045 2.604174 GGACGCGTGAAGTTGGGTG 61.604 63.158 20.70 0.00 0.00 4.61
1959 2046 2.280592 GGACGCGTGAAGTTGGGT 60.281 61.111 20.70 0.00 0.00 4.51
1960 2047 2.280524 TGGACGCGTGAAGTTGGG 60.281 61.111 20.70 0.00 0.00 4.12
1961 2048 0.319211 TACTGGACGCGTGAAGTTGG 60.319 55.000 20.70 1.73 0.00 3.77
1962 2049 1.710013 ATACTGGACGCGTGAAGTTG 58.290 50.000 20.70 2.90 0.00 3.16
1963 2050 2.229543 TGTATACTGGACGCGTGAAGTT 59.770 45.455 20.70 12.52 0.00 2.66
1964 2051 1.814394 TGTATACTGGACGCGTGAAGT 59.186 47.619 20.70 21.94 0.00 3.01
1965 2052 2.182825 GTGTATACTGGACGCGTGAAG 58.817 52.381 20.70 16.76 0.00 3.02
1966 2053 1.466192 CGTGTATACTGGACGCGTGAA 60.466 52.381 20.70 2.69 43.86 3.18
1967 2054 0.097499 CGTGTATACTGGACGCGTGA 59.903 55.000 20.70 0.82 43.86 4.35
1968 2055 2.562489 CGTGTATACTGGACGCGTG 58.438 57.895 20.70 4.59 43.86 5.34
1972 2059 0.100682 AGCAGCGTGTATACTGGACG 59.899 55.000 9.25 9.25 34.38 4.79
1973 2060 3.114065 GTTAGCAGCGTGTATACTGGAC 58.886 50.000 4.17 0.00 34.38 4.02
1974 2061 3.021695 AGTTAGCAGCGTGTATACTGGA 58.978 45.455 4.17 0.00 34.38 3.86
1975 2062 3.438297 AGTTAGCAGCGTGTATACTGG 57.562 47.619 4.17 0.00 34.38 4.00
1976 2063 4.673441 AGAAGTTAGCAGCGTGTATACTG 58.327 43.478 4.17 0.00 36.96 2.74
1977 2064 4.398358 TGAGAAGTTAGCAGCGTGTATACT 59.602 41.667 4.17 0.00 0.00 2.12
1978 2065 4.499758 GTGAGAAGTTAGCAGCGTGTATAC 59.500 45.833 0.00 0.00 0.00 1.47
1979 2066 4.669318 GTGAGAAGTTAGCAGCGTGTATA 58.331 43.478 0.00 0.00 0.00 1.47
1980 2067 3.512680 GTGAGAAGTTAGCAGCGTGTAT 58.487 45.455 0.00 0.00 0.00 2.29
1981 2068 2.667448 CGTGAGAAGTTAGCAGCGTGTA 60.667 50.000 0.00 0.00 0.00 2.90
1982 2069 1.784525 GTGAGAAGTTAGCAGCGTGT 58.215 50.000 0.00 0.00 0.00 4.49
1983 2070 0.710567 CGTGAGAAGTTAGCAGCGTG 59.289 55.000 0.00 0.00 0.00 5.34
1984 2071 0.314302 ACGTGAGAAGTTAGCAGCGT 59.686 50.000 0.00 0.00 0.00 5.07
1985 2072 0.985549 GACGTGAGAAGTTAGCAGCG 59.014 55.000 0.00 0.00 0.00 5.18
1986 2073 1.721926 GTGACGTGAGAAGTTAGCAGC 59.278 52.381 0.00 0.00 0.00 5.25
1987 2074 3.290308 AGTGACGTGAGAAGTTAGCAG 57.710 47.619 0.00 0.00 0.00 4.24
1988 2075 3.057736 GGTAGTGACGTGAGAAGTTAGCA 60.058 47.826 0.00 0.00 0.00 3.49
1989 2076 3.190953 AGGTAGTGACGTGAGAAGTTAGC 59.809 47.826 0.00 0.00 0.00 3.09
1990 2077 5.642919 AGTAGGTAGTGACGTGAGAAGTTAG 59.357 44.000 0.00 0.00 0.00 2.34
1991 2078 5.410746 CAGTAGGTAGTGACGTGAGAAGTTA 59.589 44.000 0.00 0.00 0.00 2.24
1992 2079 4.215827 CAGTAGGTAGTGACGTGAGAAGTT 59.784 45.833 0.00 0.00 0.00 2.66
1993 2080 3.752222 CAGTAGGTAGTGACGTGAGAAGT 59.248 47.826 0.00 0.00 0.00 3.01
1994 2081 4.001652 TCAGTAGGTAGTGACGTGAGAAG 58.998 47.826 0.00 0.00 31.07 2.85
1995 2082 4.011966 TCAGTAGGTAGTGACGTGAGAA 57.988 45.455 0.00 0.00 31.07 2.87
1996 2083 3.690475 TCAGTAGGTAGTGACGTGAGA 57.310 47.619 0.00 0.00 31.07 3.27
1997 2084 4.761235 TTTCAGTAGGTAGTGACGTGAG 57.239 45.455 0.00 0.00 35.52 3.51
1998 2085 4.823442 TCTTTTCAGTAGGTAGTGACGTGA 59.177 41.667 0.00 0.00 35.52 4.35
1999 2086 5.117355 TCTTTTCAGTAGGTAGTGACGTG 57.883 43.478 0.00 0.00 35.52 4.49
2000 2087 5.301298 ACTTCTTTTCAGTAGGTAGTGACGT 59.699 40.000 0.00 0.00 35.52 4.34
2001 2088 5.770417 ACTTCTTTTCAGTAGGTAGTGACG 58.230 41.667 0.00 0.00 35.52 4.35
2002 2089 6.157904 GGACTTCTTTTCAGTAGGTAGTGAC 58.842 44.000 0.00 0.00 35.52 3.67
2003 2090 5.836898 TGGACTTCTTTTCAGTAGGTAGTGA 59.163 40.000 0.00 0.00 34.04 3.41
2004 2091 5.927115 GTGGACTTCTTTTCAGTAGGTAGTG 59.073 44.000 0.00 0.00 0.00 2.74
2005 2092 5.601313 TGTGGACTTCTTTTCAGTAGGTAGT 59.399 40.000 0.00 0.00 0.00 2.73
2006 2093 6.097915 TGTGGACTTCTTTTCAGTAGGTAG 57.902 41.667 0.00 0.00 0.00 3.18
2007 2094 6.269077 TGATGTGGACTTCTTTTCAGTAGGTA 59.731 38.462 0.00 0.00 0.00 3.08
2008 2095 5.071788 TGATGTGGACTTCTTTTCAGTAGGT 59.928 40.000 0.00 0.00 0.00 3.08
2009 2096 5.409826 GTGATGTGGACTTCTTTTCAGTAGG 59.590 44.000 0.00 0.00 0.00 3.18
2010 2097 6.226787 AGTGATGTGGACTTCTTTTCAGTAG 58.773 40.000 0.00 0.00 0.00 2.57
2011 2098 6.174720 AGTGATGTGGACTTCTTTTCAGTA 57.825 37.500 0.00 0.00 0.00 2.74
2012 2099 5.041191 AGTGATGTGGACTTCTTTTCAGT 57.959 39.130 0.00 0.00 0.00 3.41
2013 2100 4.453819 GGAGTGATGTGGACTTCTTTTCAG 59.546 45.833 0.00 0.00 0.00 3.02
2014 2101 4.389374 GGAGTGATGTGGACTTCTTTTCA 58.611 43.478 0.00 0.00 0.00 2.69
2015 2102 3.753797 GGGAGTGATGTGGACTTCTTTTC 59.246 47.826 0.00 0.00 0.00 2.29
2016 2103 3.395941 AGGGAGTGATGTGGACTTCTTTT 59.604 43.478 0.00 0.00 0.00 2.27
2072 2159 9.038072 GGGGGATTAATTAACCAGTTTTAAAGA 57.962 33.333 14.70 0.00 0.00 2.52
2082 2169 3.955551 GCTTTCGGGGGATTAATTAACCA 59.044 43.478 14.70 0.00 0.00 3.67
2101 2188 3.118038 TGATTTGGCCGGTATTAGAGCTT 60.118 43.478 1.90 0.00 0.00 3.74
2151 2238 2.354539 CAAGCAAAACCACCGGCG 60.355 61.111 0.00 0.00 0.00 6.46
2178 2268 3.794270 CCGACGTGGCAATAGTGG 58.206 61.111 0.00 0.00 0.00 4.00
2211 2302 1.373497 CCCGTGCTCATATCGCCTC 60.373 63.158 0.00 0.00 0.00 4.70
2245 2716 2.091111 AGGATTGGGGATTGGATGAACC 60.091 50.000 0.00 0.00 39.54 3.62
2307 2790 1.020437 GGCACATCTTAGCTTCAGCC 58.980 55.000 0.00 0.00 43.38 4.85
2318 2801 1.273759 TCAGAGAGCAAGGCACATCT 58.726 50.000 0.00 0.00 0.00 2.90
2319 2802 2.328819 ATCAGAGAGCAAGGCACATC 57.671 50.000 0.00 0.00 0.00 3.06
2324 2807 1.485895 AGAGGAATCAGAGAGCAAGGC 59.514 52.381 0.00 0.00 0.00 4.35
2330 2813 2.965147 GGGAAGGAGAGGAATCAGAGAG 59.035 54.545 0.00 0.00 0.00 3.20
2337 2820 1.506025 GAGCAGGGAAGGAGAGGAAT 58.494 55.000 0.00 0.00 0.00 3.01
2384 2867 4.937431 GAGGTGGGCGGCTATGGC 62.937 72.222 9.56 0.00 37.82 4.40
2385 2868 4.256180 GGAGGTGGGCGGCTATGG 62.256 72.222 9.56 0.00 0.00 2.74
2387 2870 1.152118 TATGGAGGTGGGCGGCTAT 60.152 57.895 9.56 0.00 0.00 2.97
2388 2871 1.837051 CTATGGAGGTGGGCGGCTA 60.837 63.158 9.56 0.00 0.00 3.93
2390 2873 2.942648 GAACTATGGAGGTGGGCGGC 62.943 65.000 0.00 0.00 0.00 6.53
2391 2874 1.146263 GAACTATGGAGGTGGGCGG 59.854 63.158 0.00 0.00 0.00 6.13
2392 2875 1.146263 GGAACTATGGAGGTGGGCG 59.854 63.158 0.00 0.00 0.00 6.13
2393 2876 0.470341 GAGGAACTATGGAGGTGGGC 59.530 60.000 0.00 0.00 41.55 5.36
2395 2878 1.132500 GGGAGGAACTATGGAGGTGG 58.868 60.000 0.00 0.00 41.55 4.61
2397 2880 0.029989 GGGGGAGGAACTATGGAGGT 60.030 60.000 0.00 0.00 41.55 3.85
2398 2881 2.855669 GGGGGAGGAACTATGGAGG 58.144 63.158 0.00 0.00 41.55 4.30
2414 2897 2.991167 AATGAGGGATCGGGGAGGGG 62.991 65.000 0.00 0.00 0.00 4.79
2415 2898 1.462238 AATGAGGGATCGGGGAGGG 60.462 63.158 0.00 0.00 0.00 4.30
2416 2899 0.472734 AGAATGAGGGATCGGGGAGG 60.473 60.000 0.00 0.00 0.00 4.30
2417 2900 0.972883 GAGAATGAGGGATCGGGGAG 59.027 60.000 0.00 0.00 0.00 4.30
2418 2901 0.471971 GGAGAATGAGGGATCGGGGA 60.472 60.000 0.00 0.00 0.00 4.81
2489 2972 3.165071 TCCAAGATGAGACTGTGCTACA 58.835 45.455 0.00 0.00 0.00 2.74
2491 2974 3.435275 ACTCCAAGATGAGACTGTGCTA 58.565 45.455 0.00 0.00 36.22 3.49
2495 2978 3.260380 CAGGAACTCCAAGATGAGACTGT 59.740 47.826 0.00 0.00 34.60 3.55
2529 3013 7.094975 CCCAAATTAATACTCACGAAGTCACAA 60.095 37.037 0.00 0.00 41.61 3.33
2530 3014 6.370442 CCCAAATTAATACTCACGAAGTCACA 59.630 38.462 0.00 0.00 41.61 3.58
2531 3015 6.592607 TCCCAAATTAATACTCACGAAGTCAC 59.407 38.462 0.00 0.00 41.61 3.67
2532 3016 6.592607 GTCCCAAATTAATACTCACGAAGTCA 59.407 38.462 0.00 0.00 41.61 3.41
2533 3017 6.592607 TGTCCCAAATTAATACTCACGAAGTC 59.407 38.462 0.00 0.00 41.61 3.01
2535 3019 6.594159 ACTGTCCCAAATTAATACTCACGAAG 59.406 38.462 0.00 0.00 0.00 3.79
2536 3020 6.469410 ACTGTCCCAAATTAATACTCACGAA 58.531 36.000 0.00 0.00 0.00 3.85
2552 3036 1.419381 TCTGCACTTGTACTGTCCCA 58.581 50.000 0.00 0.00 0.00 4.37



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.