Multiple sequence alignment - TraesCS1A01G223800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G223800 chr1A 100.000 4561 0 0 1 4561 394303028 394298468 0 8423
1 TraesCS1A01G223800 chr1B 92.129 4294 219 53 1 4208 424079754 424075494 0 5947
2 TraesCS1A01G223800 chr1D 92.134 4259 217 42 1 4183 314010109 314005893 0 5901


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G223800 chr1A 394298468 394303028 4560 True 8423 8423 100.000 1 4561 1 chr1A.!!$R1 4560
1 TraesCS1A01G223800 chr1B 424075494 424079754 4260 True 5947 5947 92.129 1 4208 1 chr1B.!!$R1 4207
2 TraesCS1A01G223800 chr1D 314005893 314010109 4216 True 5901 5901 92.134 1 4183 1 chr1D.!!$R1 4182

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
754 791 0.928229 CTAATCGGTAGTGGCGTTGC 59.072 55.000 0.00 0.0 0.00 4.17 F
913 954 1.000019 TCTCGACCGACCTCCCAAT 60.000 57.895 0.00 0.0 0.00 3.16 F
972 1015 1.133253 CGCGTCGACTCGGAAGTAA 59.867 57.895 19.69 0.0 35.28 2.24 F
1185 1228 2.025155 TCTCTCCTCGACATGTAAGCC 58.975 52.381 0.00 0.0 0.00 4.35 F
2919 2993 1.477014 GGCCTGTTTGAGCTATACCCC 60.477 57.143 0.00 0.0 0.00 4.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2070 2115 0.387929 TGGTCGTGTCACCTTCACTC 59.612 55.000 0.00 0.0 37.34 3.51 R
2530 2578 1.734655 ATCATGGCTACTAGTGGGGG 58.265 55.000 5.39 0.0 0.00 5.40 R
2796 2865 1.836802 AGGGAGATTTGCAGGAGAGAC 59.163 52.381 0.00 0.0 0.00 3.36 R
2991 3065 0.685097 GTTGTCCTGCTAGTGGGTGA 59.315 55.000 4.49 0.0 0.00 4.02 R
4524 4628 0.107214 AGCCCAATGTGTATGTCCGG 60.107 55.000 0.00 0.0 0.00 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 8.794335 AGGAGAGGTTTATAAGAAAATGTGAC 57.206 34.615 0.00 0.00 0.00 3.67
100 103 7.043961 TGTTCTATCTCAAGCATTAGATCGT 57.956 36.000 0.00 0.00 34.36 3.73
130 137 6.040278 TCTGGTTGCAAAGATTGTGAACATAA 59.960 34.615 0.00 0.00 31.08 1.90
159 166 6.877611 TTCAACACTAGTCTGGATTTTTCC 57.122 37.500 0.00 0.00 0.00 3.13
193 202 9.896263 GGCACTAGTCTAGACTTAATTATGTAC 57.104 37.037 29.57 11.79 42.54 2.90
252 262 4.999950 ACCTCTTTCTCGAGTCGTAGTTTA 59.000 41.667 13.13 0.00 0.00 2.01
253 263 5.122082 ACCTCTTTCTCGAGTCGTAGTTTAG 59.878 44.000 13.13 1.11 0.00 1.85
254 264 5.350914 CCTCTTTCTCGAGTCGTAGTTTAGA 59.649 44.000 13.13 3.77 0.00 2.10
255 265 6.037391 CCTCTTTCTCGAGTCGTAGTTTAGAT 59.963 42.308 13.13 0.00 0.00 1.98
256 266 7.375106 TCTTTCTCGAGTCGTAGTTTAGATT 57.625 36.000 13.13 0.00 0.00 2.40
319 329 6.425577 TTTATATCTTACACGGGTGTTTGC 57.574 37.500 10.04 0.00 41.83 3.68
374 384 1.933853 GCGGGAGACAATGTACATGTC 59.066 52.381 21.22 21.22 45.94 3.06
384 394 5.779922 ACAATGTACATGTCGACTACAAGT 58.220 37.500 17.92 15.38 42.70 3.16
393 403 5.441709 TGTCGACTACAAGTTATGTGTGA 57.558 39.130 17.92 0.00 43.77 3.58
415 425 9.409312 TGTGATGATTTTGCAACTATTGTAAAG 57.591 29.630 0.00 0.00 44.07 1.85
422 432 9.691362 ATTTTGCAACTATTGTAAAGAACGAAT 57.309 25.926 0.00 0.00 44.07 3.34
435 445 3.650139 AGAACGAATTGAGCGTAACTGT 58.350 40.909 0.00 0.00 41.75 3.55
443 453 3.120321 TGAGCGTAACTGTGATGGTTT 57.880 42.857 0.00 0.00 0.00 3.27
448 458 5.061179 AGCGTAACTGTGATGGTTTAAGTT 58.939 37.500 0.00 0.00 35.39 2.66
453 463 8.767085 CGTAACTGTGATGGTTTAAGTTTTAGA 58.233 33.333 0.00 0.00 33.37 2.10
477 487 1.895131 AGCATTGGTGGTCACATTTCC 59.105 47.619 3.40 0.00 0.00 3.13
479 489 2.246469 CATTGGTGGTCACATTTCCCA 58.754 47.619 3.40 0.00 0.00 4.37
492 502 8.093927 GGTCACATTTCCCAGAATTTATTTCAA 58.906 33.333 0.00 0.00 36.75 2.69
510 520 3.615155 TCAATTATTCCGGTGATGTGCA 58.385 40.909 0.00 0.00 0.00 4.57
513 523 5.126869 TCAATTATTCCGGTGATGTGCATTT 59.873 36.000 0.00 0.00 0.00 2.32
514 524 2.945447 ATTCCGGTGATGTGCATTTG 57.055 45.000 0.00 0.00 0.00 2.32
517 527 1.003696 TCCGGTGATGTGCATTTGGTA 59.996 47.619 0.00 0.00 0.00 3.25
521 531 2.682856 GGTGATGTGCATTTGGTACGAT 59.317 45.455 0.00 0.00 34.44 3.73
529 539 4.094887 GTGCATTTGGTACGATGAGACATT 59.905 41.667 0.00 0.00 0.00 2.71
530 540 4.699735 TGCATTTGGTACGATGAGACATTT 59.300 37.500 0.00 0.00 0.00 2.32
532 542 5.730568 GCATTTGGTACGATGAGACATTTCC 60.731 44.000 0.00 0.00 0.00 3.13
536 546 3.428452 GGTACGATGAGACATTTCCGTCA 60.428 47.826 0.00 0.00 38.43 4.35
546 556 4.275936 AGACATTTCCGTCAACTTCAAAGG 59.724 41.667 0.00 0.00 38.43 3.11
552 562 2.288458 CCGTCAACTTCAAAGGCGTTTA 59.712 45.455 3.71 0.00 0.00 2.01
565 575 2.364002 AGGCGTTTATGGCAACTTTGTT 59.636 40.909 0.00 0.00 36.77 2.83
690 725 9.710900 AGGGACAAAGAAAAGCTATTTTTAATG 57.289 29.630 0.00 0.00 39.06 1.90
691 726 9.705290 GGGACAAAGAAAAGCTATTTTTAATGA 57.295 29.630 0.00 0.00 39.06 2.57
754 791 0.928229 CTAATCGGTAGTGGCGTTGC 59.072 55.000 0.00 0.00 0.00 4.17
811 851 2.823829 CGCCCATTACGCTTCCAGC 61.824 63.158 0.00 0.00 38.02 4.85
913 954 1.000019 TCTCGACCGACCTCCCAAT 60.000 57.895 0.00 0.00 0.00 3.16
931 972 1.998222 ATACTTCCCTAGGCGTCTCC 58.002 55.000 2.05 0.00 0.00 3.71
972 1015 1.133253 CGCGTCGACTCGGAAGTAA 59.867 57.895 19.69 0.00 35.28 2.24
1185 1228 2.025155 TCTCTCCTCGACATGTAAGCC 58.975 52.381 0.00 0.00 0.00 4.35
1206 1249 3.396570 CCGCGTTCCCCCTAGGTT 61.397 66.667 8.29 0.00 36.75 3.50
1295 1339 3.130693 AGCTATACAGGTTCGACAAGGAC 59.869 47.826 0.00 0.00 0.00 3.85
1460 1505 6.830838 AGATTTTGCTCCTTTATTTCCGATCT 59.169 34.615 0.00 0.00 0.00 2.75
1496 1541 6.608808 TCAAGTAGATTCATCACAGGATCTCA 59.391 38.462 0.00 0.00 0.00 3.27
1500 1545 6.104146 AGATTCATCACAGGATCTCATCTG 57.896 41.667 0.00 0.00 37.07 2.90
1523 1568 2.808202 CGGTTATGGCCTTGATCCTCTG 60.808 54.545 3.32 0.00 0.00 3.35
1683 1728 2.158957 AGTTCTCAACTCTGTTTCCGCA 60.159 45.455 0.00 0.00 37.02 5.69
1702 1747 2.978010 GGGTGTGTCTTGCGTGGG 60.978 66.667 0.00 0.00 0.00 4.61
1705 1750 2.203139 TGTGTCTTGCGTGGGTGG 60.203 61.111 0.00 0.00 0.00 4.61
1815 1860 5.992217 CCTGGTTACATTCTATAGCTGAACC 59.008 44.000 17.60 17.60 36.46 3.62
1832 1877 5.054390 TGAACCTTGTGTTTTGTCTTGAC 57.946 39.130 0.00 0.00 37.29 3.18
1852 1897 7.698970 TCTTGACCACGTGAATTTTTCTTTTAC 59.301 33.333 19.30 0.00 0.00 2.01
1879 1924 5.581126 TTATTATTTGCAAGGCTCAGTGG 57.419 39.130 0.00 0.00 0.00 4.00
2126 2171 7.546358 TGTTTTCATGTGACTCTTGATGTTTT 58.454 30.769 0.00 0.00 31.79 2.43
2242 2288 3.069443 TCCACATGGAAGTTCTTTTTGCC 59.931 43.478 2.25 0.00 42.18 4.52
2243 2289 3.181467 CCACATGGAAGTTCTTTTTGCCA 60.181 43.478 2.25 0.00 37.39 4.92
2310 2356 8.287503 ACATTTTTAATTCCAGTTGACGAGTAC 58.712 33.333 0.00 0.00 0.00 2.73
2376 2422 9.656040 TTGATATTTGTAGCTTCAAAATTGCAT 57.344 25.926 20.42 7.43 40.05 3.96
2447 2494 7.168905 ACCTGTTAGAACTTTTTAGGGATGAG 58.831 38.462 0.00 0.00 0.00 2.90
2506 2554 7.342799 ACATAATTTGGAATAATGCACTGTCCT 59.657 33.333 8.52 0.00 0.00 3.85
2530 2578 6.684609 AGTTCTTTTGTTTCGTGTTGTTTC 57.315 33.333 0.00 0.00 0.00 2.78
2594 2663 5.447548 GCCACACACGTTAGTCTTTGTTTTA 60.448 40.000 0.00 0.00 0.00 1.52
2624 2693 4.548494 CTCAATGCAGCATTTTGTGTGTA 58.452 39.130 18.48 0.00 31.05 2.90
2635 2704 7.222417 CAGCATTTTGTGTGTAATTCTGTGAAA 59.778 33.333 0.00 0.00 0.00 2.69
2725 2794 8.814038 ATTTCTTATTTCATCCAAGTAGCAGT 57.186 30.769 0.00 0.00 0.00 4.40
2783 2852 6.823689 ACTTATGGCTGTCGTTCAATCTTATT 59.176 34.615 0.00 0.00 0.00 1.40
2919 2993 1.477014 GGCCTGTTTGAGCTATACCCC 60.477 57.143 0.00 0.00 0.00 4.95
2928 3002 3.148084 CTATACCCCACCCAGGCG 58.852 66.667 0.00 0.00 35.39 5.52
2964 3038 8.850156 GTTTGATATGTGGTTAGCTAATCCAAT 58.150 33.333 21.75 18.81 32.82 3.16
2991 3065 5.374921 AGCATATTCAAGCAGCAGTATCTT 58.625 37.500 0.00 0.00 0.00 2.40
3042 3116 6.208204 ACTCTGCATTTTTCTCTGTTATTGCT 59.792 34.615 0.00 0.00 0.00 3.91
3059 3133 3.033114 CTGTCAGAAGAGAGCTGCG 57.967 57.895 0.00 0.00 33.45 5.18
3107 3182 1.635487 TCTAGCCCAGAATTGCTTGGT 59.365 47.619 0.00 0.00 39.00 3.67
3151 3226 2.377193 ACACCCAGGGTTAGCATTAACA 59.623 45.455 9.12 0.00 40.77 2.41
3215 3290 2.158755 CCAGTCAACCAGAGGTCAACTT 60.159 50.000 0.00 0.00 33.12 2.66
3216 3291 3.545703 CAGTCAACCAGAGGTCAACTTT 58.454 45.455 0.00 0.00 33.12 2.66
3248 3324 1.737838 TCTTTTGCTCTATGCCACCG 58.262 50.000 0.00 0.00 42.00 4.94
3287 3363 7.809806 GCTGATGCTCCATATTTATGTTTTACC 59.190 37.037 0.00 0.00 36.03 2.85
3336 3415 3.196469 TGTCTCTGCTAATGACTCCCTTG 59.804 47.826 0.00 0.00 0.00 3.61
3440 3519 0.606673 AAGAAGGTTCTTCTGCGGCC 60.607 55.000 10.48 0.00 43.72 6.13
3506 3585 1.137872 AGTGCAGCTAAGGAGGAATCG 59.862 52.381 0.00 0.00 0.00 3.34
3542 3621 0.465460 AGACAGAAACCAAAGCCGCA 60.465 50.000 0.00 0.00 0.00 5.69
3613 3692 2.044650 AGCATTGCTCGGTGGCAT 60.045 55.556 5.03 0.00 42.09 4.40
3688 3767 7.752239 CGATGAAATATGCTGAGAACTTTTTGT 59.248 33.333 0.00 0.00 0.00 2.83
3729 3808 0.107459 GCAGAGTCCATCTTCACCCC 60.107 60.000 0.00 0.00 35.47 4.95
3786 3866 7.226523 TGTTATGTAAAATATCTGCTCGCATGT 59.773 33.333 0.00 0.00 0.00 3.21
3914 3994 3.884693 TGCTGGTTATGGATTGCATACAG 59.115 43.478 9.89 9.89 0.00 2.74
3917 4000 4.535781 TGGTTATGGATTGCATACAGCTT 58.464 39.130 0.00 0.00 45.94 3.74
3967 4050 5.345702 CACATTTGATATGCCAGTTCCTTG 58.654 41.667 0.00 0.00 0.00 3.61
3978 4061 3.780902 CCAGTTCCTTGTTGGTTTGTTC 58.219 45.455 0.00 0.00 37.07 3.18
3997 4080 5.610398 TGTTCTTCTTACATGTGAGAAGCA 58.390 37.500 37.28 30.49 46.60 3.91
3999 4082 5.474578 TCTTCTTACATGTGAGAAGCAGT 57.525 39.130 37.28 3.32 46.60 4.40
4005 4088 3.144506 ACATGTGAGAAGCAGTTCCTTG 58.855 45.455 0.00 0.00 32.48 3.61
4006 4089 2.260844 TGTGAGAAGCAGTTCCTTGG 57.739 50.000 0.00 0.00 32.48 3.61
4007 4090 1.490490 TGTGAGAAGCAGTTCCTTGGT 59.510 47.619 0.00 0.00 32.48 3.67
4008 4091 2.092429 TGTGAGAAGCAGTTCCTTGGTT 60.092 45.455 0.00 0.00 41.12 3.67
4010 4093 2.951642 TGAGAAGCAGTTCCTTGGTTTG 59.048 45.455 0.00 0.00 38.76 2.93
4011 4094 2.952310 GAGAAGCAGTTCCTTGGTTTGT 59.048 45.455 0.00 0.00 38.76 2.83
4012 4095 3.365472 AGAAGCAGTTCCTTGGTTTGTT 58.635 40.909 0.00 0.00 38.76 2.83
4013 4096 3.381590 AGAAGCAGTTCCTTGGTTTGTTC 59.618 43.478 0.00 0.00 38.76 3.18
4014 4097 3.018423 AGCAGTTCCTTGGTTTGTTCT 57.982 42.857 0.00 0.00 0.00 3.01
4016 4099 4.532834 AGCAGTTCCTTGGTTTGTTCTTA 58.467 39.130 0.00 0.00 0.00 2.10
4017 4100 5.140454 AGCAGTTCCTTGGTTTGTTCTTAT 58.860 37.500 0.00 0.00 0.00 1.73
4091 4194 9.447040 AAAAGAAAACTTAGTTGCGTAATCTTC 57.553 29.630 0.00 0.00 0.00 2.87
4177 4281 9.032420 GTTTTACTACTATGGCAAGTATCAGAC 57.968 37.037 0.00 0.00 31.70 3.51
4187 4291 5.130975 TGGCAAGTATCAGACCATCTACAAT 59.869 40.000 0.00 0.00 0.00 2.71
4188 4292 6.326323 TGGCAAGTATCAGACCATCTACAATA 59.674 38.462 0.00 0.00 0.00 1.90
4190 4294 6.870965 GCAAGTATCAGACCATCTACAATAGG 59.129 42.308 0.00 0.00 0.00 2.57
4195 4299 3.325135 CAGACCATCTACAATAGGACCCC 59.675 52.174 0.00 0.00 0.00 4.95
4197 4301 3.579151 GACCATCTACAATAGGACCCCTC 59.421 52.174 0.00 0.00 34.61 4.30
4212 4316 3.827898 CTCGACCCTCCACGGCTC 61.828 72.222 0.00 0.00 0.00 4.70
4215 4319 4.083862 GACCCTCCACGGCTCCAC 62.084 72.222 0.00 0.00 0.00 4.02
4218 4322 2.363795 CCTCCACGGCTCCACCTA 60.364 66.667 0.00 0.00 35.61 3.08
4219 4323 1.762460 CCTCCACGGCTCCACCTAT 60.762 63.158 0.00 0.00 35.61 2.57
4220 4324 0.469331 CCTCCACGGCTCCACCTATA 60.469 60.000 0.00 0.00 35.61 1.31
4221 4325 1.633774 CTCCACGGCTCCACCTATAT 58.366 55.000 0.00 0.00 35.61 0.86
4222 4326 1.273606 CTCCACGGCTCCACCTATATG 59.726 57.143 0.00 0.00 35.61 1.78
4223 4327 1.048601 CCACGGCTCCACCTATATGT 58.951 55.000 0.00 0.00 35.61 2.29
4224 4328 1.000955 CCACGGCTCCACCTATATGTC 59.999 57.143 0.00 0.00 35.61 3.06
4225 4329 1.000955 CACGGCTCCACCTATATGTCC 59.999 57.143 0.00 0.00 35.61 4.02
4226 4330 0.243907 CGGCTCCACCTATATGTCCG 59.756 60.000 0.00 0.00 35.61 4.79
4227 4331 0.608640 GGCTCCACCTATATGTCCGG 59.391 60.000 0.00 0.00 34.51 5.14
4228 4332 0.608640 GCTCCACCTATATGTCCGGG 59.391 60.000 0.00 0.00 0.00 5.73
4229 4333 2.011122 CTCCACCTATATGTCCGGGT 57.989 55.000 0.00 0.00 0.00 5.28
4230 4334 2.820485 GCTCCACCTATATGTCCGGGTA 60.820 54.545 0.00 0.00 0.00 3.69
4231 4335 3.090037 CTCCACCTATATGTCCGGGTAG 58.910 54.545 0.00 0.00 0.00 3.18
4232 4336 2.718062 TCCACCTATATGTCCGGGTAGA 59.282 50.000 0.00 0.00 0.00 2.59
4233 4337 3.335786 TCCACCTATATGTCCGGGTAGAT 59.664 47.826 0.00 0.00 0.00 1.98
4234 4338 3.447586 CCACCTATATGTCCGGGTAGATG 59.552 52.174 0.00 0.00 0.00 2.90
4235 4339 4.341487 CACCTATATGTCCGGGTAGATGA 58.659 47.826 0.00 0.00 0.00 2.92
4236 4340 4.399618 CACCTATATGTCCGGGTAGATGAG 59.600 50.000 0.00 0.00 0.00 2.90
4237 4341 4.044317 ACCTATATGTCCGGGTAGATGAGT 59.956 45.833 0.00 0.00 0.00 3.41
4238 4342 4.641094 CCTATATGTCCGGGTAGATGAGTC 59.359 50.000 0.00 0.00 0.00 3.36
4239 4343 1.705873 ATGTCCGGGTAGATGAGTCC 58.294 55.000 0.00 0.00 0.00 3.85
4240 4344 0.629596 TGTCCGGGTAGATGAGTCCT 59.370 55.000 0.00 0.00 0.00 3.85
4241 4345 1.848388 TGTCCGGGTAGATGAGTCCTA 59.152 52.381 0.00 0.00 0.00 2.94
4242 4346 2.445905 TGTCCGGGTAGATGAGTCCTAT 59.554 50.000 0.00 0.00 0.00 2.57
4243 4347 2.820787 GTCCGGGTAGATGAGTCCTATG 59.179 54.545 0.00 0.00 0.00 2.23
4244 4348 2.445905 TCCGGGTAGATGAGTCCTATGT 59.554 50.000 0.00 0.00 0.00 2.29
4245 4349 2.820787 CCGGGTAGATGAGTCCTATGTC 59.179 54.545 0.00 0.00 0.00 3.06
4246 4350 2.820787 CGGGTAGATGAGTCCTATGTCC 59.179 54.545 0.00 0.00 0.00 4.02
4247 4351 3.750922 CGGGTAGATGAGTCCTATGTCCA 60.751 52.174 0.00 0.00 0.00 4.02
4248 4352 4.421131 GGGTAGATGAGTCCTATGTCCAT 58.579 47.826 0.00 0.00 0.00 3.41
4249 4353 4.464597 GGGTAGATGAGTCCTATGTCCATC 59.535 50.000 0.00 0.00 35.21 3.51
4250 4354 5.329399 GGTAGATGAGTCCTATGTCCATCT 58.671 45.833 0.00 0.00 44.12 2.90
4251 4355 6.486056 GGTAGATGAGTCCTATGTCCATCTA 58.514 44.000 0.00 0.00 42.51 1.98
4253 4357 6.212840 AGATGAGTCCTATGTCCATCTACT 57.787 41.667 0.00 0.00 41.27 2.57
4254 4358 6.245408 AGATGAGTCCTATGTCCATCTACTC 58.755 44.000 0.00 0.00 41.27 2.59
4255 4359 4.390264 TGAGTCCTATGTCCATCTACTCG 58.610 47.826 0.00 0.00 35.71 4.18
4256 4360 3.754323 GAGTCCTATGTCCATCTACTCGG 59.246 52.174 0.00 0.00 0.00 4.63
4257 4361 3.138653 AGTCCTATGTCCATCTACTCGGT 59.861 47.826 0.00 0.00 0.00 4.69
4258 4362 3.502979 GTCCTATGTCCATCTACTCGGTC 59.497 52.174 0.00 0.00 0.00 4.79
4259 4363 3.137728 TCCTATGTCCATCTACTCGGTCA 59.862 47.826 0.00 0.00 0.00 4.02
4260 4364 4.082845 CCTATGTCCATCTACTCGGTCAT 58.917 47.826 0.00 0.00 35.60 3.06
4261 4365 4.082517 CCTATGTCCATCTACTCGGTCATG 60.083 50.000 0.00 0.00 33.81 3.07
4262 4366 3.012934 TGTCCATCTACTCGGTCATGA 57.987 47.619 0.00 0.00 0.00 3.07
4263 4367 3.361786 TGTCCATCTACTCGGTCATGAA 58.638 45.455 0.00 0.00 0.00 2.57
4264 4368 3.767131 TGTCCATCTACTCGGTCATGAAA 59.233 43.478 0.00 0.00 0.00 2.69
4265 4369 4.221924 TGTCCATCTACTCGGTCATGAAAA 59.778 41.667 0.00 0.00 0.00 2.29
4266 4370 4.567159 GTCCATCTACTCGGTCATGAAAAC 59.433 45.833 0.00 0.00 0.00 2.43
4267 4371 3.871594 CCATCTACTCGGTCATGAAAACC 59.128 47.826 0.00 0.00 0.00 3.27
4268 4372 4.383118 CCATCTACTCGGTCATGAAAACCT 60.383 45.833 0.00 0.00 34.45 3.50
4269 4373 4.188247 TCTACTCGGTCATGAAAACCTG 57.812 45.455 0.00 0.00 34.45 4.00
4270 4374 2.930826 ACTCGGTCATGAAAACCTGT 57.069 45.000 0.00 0.00 34.45 4.00
4271 4375 2.767505 ACTCGGTCATGAAAACCTGTC 58.232 47.619 0.00 0.00 34.45 3.51
4272 4376 2.076863 CTCGGTCATGAAAACCTGTCC 58.923 52.381 0.00 0.00 34.45 4.02
4273 4377 1.697432 TCGGTCATGAAAACCTGTCCT 59.303 47.619 0.00 0.00 34.45 3.85
4274 4378 2.901192 TCGGTCATGAAAACCTGTCCTA 59.099 45.455 0.00 0.00 34.45 2.94
4275 4379 3.517901 TCGGTCATGAAAACCTGTCCTAT 59.482 43.478 0.00 0.00 34.45 2.57
4276 4380 3.623060 CGGTCATGAAAACCTGTCCTATG 59.377 47.826 0.00 0.00 34.45 2.23
4277 4381 4.589908 GGTCATGAAAACCTGTCCTATGT 58.410 43.478 0.00 0.00 33.78 2.29
4278 4382 4.636206 GGTCATGAAAACCTGTCCTATGTC 59.364 45.833 0.00 0.00 33.78 3.06
4279 4383 4.636206 GTCATGAAAACCTGTCCTATGTCC 59.364 45.833 0.00 0.00 0.00 4.02
4280 4384 3.328382 TGAAAACCTGTCCTATGTCCG 57.672 47.619 0.00 0.00 0.00 4.79
4281 4385 2.027561 TGAAAACCTGTCCTATGTCCGG 60.028 50.000 0.00 0.00 0.00 5.14
4282 4386 0.909623 AAACCTGTCCTATGTCCGGG 59.090 55.000 0.00 0.00 0.00 5.73
4283 4387 1.623542 AACCTGTCCTATGTCCGGGC 61.624 60.000 0.00 0.00 0.00 6.13
4284 4388 1.762460 CCTGTCCTATGTCCGGGCT 60.762 63.158 7.97 0.00 0.00 5.19
4285 4389 1.443407 CTGTCCTATGTCCGGGCTG 59.557 63.158 7.97 0.00 0.00 4.85
4286 4390 1.305802 TGTCCTATGTCCGGGCTGT 60.306 57.895 7.97 0.00 0.00 4.40
4287 4391 1.144057 GTCCTATGTCCGGGCTGTG 59.856 63.158 7.97 0.00 0.00 3.66
4288 4392 2.063979 TCCTATGTCCGGGCTGTGG 61.064 63.158 7.97 6.53 0.00 4.17
4289 4393 2.203070 CTATGTCCGGGCTGTGGC 60.203 66.667 7.97 0.00 37.82 5.01
4290 4394 3.006133 TATGTCCGGGCTGTGGCA 61.006 61.111 7.97 0.00 40.87 4.92
4291 4395 3.323758 TATGTCCGGGCTGTGGCAC 62.324 63.158 11.55 11.55 40.87 5.01
4293 4397 4.643387 GTCCGGGCTGTGGCACTT 62.643 66.667 19.83 0.00 40.25 3.16
4294 4398 4.329545 TCCGGGCTGTGGCACTTC 62.330 66.667 19.83 9.98 40.25 3.01
4295 4399 4.641645 CCGGGCTGTGGCACTTCA 62.642 66.667 19.83 0.00 40.25 3.02
4296 4400 2.594303 CGGGCTGTGGCACTTCAA 60.594 61.111 19.83 0.00 40.25 2.69
4297 4401 2.192861 CGGGCTGTGGCACTTCAAA 61.193 57.895 19.83 0.00 40.25 2.69
4298 4402 1.733402 CGGGCTGTGGCACTTCAAAA 61.733 55.000 19.83 0.00 40.25 2.44
4299 4403 0.463620 GGGCTGTGGCACTTCAAAAA 59.536 50.000 19.83 0.00 39.12 1.94
4300 4404 1.070601 GGGCTGTGGCACTTCAAAAAT 59.929 47.619 19.83 0.00 39.12 1.82
4301 4405 2.407090 GGCTGTGGCACTTCAAAAATC 58.593 47.619 19.83 0.00 40.87 2.17
4302 4406 2.407090 GCTGTGGCACTTCAAAAATCC 58.593 47.619 19.83 0.00 38.54 3.01
4303 4407 2.224018 GCTGTGGCACTTCAAAAATCCA 60.224 45.455 19.83 0.00 38.54 3.41
4304 4408 3.740764 GCTGTGGCACTTCAAAAATCCAA 60.741 43.478 19.83 0.00 38.54 3.53
4305 4409 3.791245 TGTGGCACTTCAAAAATCCAAC 58.209 40.909 19.83 0.00 0.00 3.77
4306 4410 3.130633 GTGGCACTTCAAAAATCCAACC 58.869 45.455 11.13 0.00 0.00 3.77
4307 4411 2.103941 TGGCACTTCAAAAATCCAACCC 59.896 45.455 0.00 0.00 0.00 4.11
4308 4412 2.103941 GGCACTTCAAAAATCCAACCCA 59.896 45.455 0.00 0.00 0.00 4.51
4309 4413 3.244526 GGCACTTCAAAAATCCAACCCAT 60.245 43.478 0.00 0.00 0.00 4.00
4310 4414 3.747529 GCACTTCAAAAATCCAACCCATG 59.252 43.478 0.00 0.00 0.00 3.66
4311 4415 4.743348 GCACTTCAAAAATCCAACCCATGT 60.743 41.667 0.00 0.00 0.00 3.21
4312 4416 4.751098 CACTTCAAAAATCCAACCCATGTG 59.249 41.667 0.00 0.00 0.00 3.21
4313 4417 4.408596 ACTTCAAAAATCCAACCCATGTGT 59.591 37.500 0.00 0.00 0.00 3.72
4314 4418 4.333913 TCAAAAATCCAACCCATGTGTG 57.666 40.909 0.00 0.00 0.00 3.82
4315 4419 3.070734 TCAAAAATCCAACCCATGTGTGG 59.929 43.478 0.00 0.00 45.61 4.17
4326 4430 3.423539 CCATGTGTGGGTGGATATAGG 57.576 52.381 0.00 0.00 42.11 2.57
4327 4431 2.040278 CCATGTGTGGGTGGATATAGGG 59.960 54.545 0.00 0.00 42.11 3.53
4328 4432 2.879208 TGTGTGGGTGGATATAGGGA 57.121 50.000 0.00 0.00 0.00 4.20
4329 4433 2.404559 TGTGTGGGTGGATATAGGGAC 58.595 52.381 0.00 0.00 0.00 4.46
4330 4434 1.343465 GTGTGGGTGGATATAGGGACG 59.657 57.143 0.00 0.00 0.00 4.79
4331 4435 0.974383 GTGGGTGGATATAGGGACGG 59.026 60.000 0.00 0.00 0.00 4.79
4332 4436 0.178915 TGGGTGGATATAGGGACGGG 60.179 60.000 0.00 0.00 0.00 5.28
4333 4437 0.115745 GGGTGGATATAGGGACGGGA 59.884 60.000 0.00 0.00 0.00 5.14
4334 4438 1.483686 GGGTGGATATAGGGACGGGAA 60.484 57.143 0.00 0.00 0.00 3.97
4335 4439 2.547990 GGTGGATATAGGGACGGGAAT 58.452 52.381 0.00 0.00 0.00 3.01
4336 4440 2.236395 GGTGGATATAGGGACGGGAATG 59.764 54.545 0.00 0.00 0.00 2.67
4337 4441 2.236395 GTGGATATAGGGACGGGAATGG 59.764 54.545 0.00 0.00 0.00 3.16
4338 4442 2.158066 TGGATATAGGGACGGGAATGGT 60.158 50.000 0.00 0.00 0.00 3.55
4339 4443 2.500504 GGATATAGGGACGGGAATGGTC 59.499 54.545 0.00 0.00 0.00 4.02
4355 4459 6.141560 GAATGGTCCATTCCAAATCTCTTC 57.858 41.667 27.95 5.64 42.90 2.87
4356 4460 4.656100 TGGTCCATTCCAAATCTCTTCA 57.344 40.909 0.00 0.00 34.24 3.02
4357 4461 4.996793 TGGTCCATTCCAAATCTCTTCAA 58.003 39.130 0.00 0.00 34.24 2.69
4358 4462 5.012239 TGGTCCATTCCAAATCTCTTCAAG 58.988 41.667 0.00 0.00 34.24 3.02
4359 4463 5.222109 TGGTCCATTCCAAATCTCTTCAAGA 60.222 40.000 0.00 0.00 34.79 3.02
4360 4464 5.124617 GGTCCATTCCAAATCTCTTCAAGAC 59.875 44.000 0.00 0.00 36.65 3.01
4361 4465 4.937620 TCCATTCCAAATCTCTTCAAGACG 59.062 41.667 0.00 0.00 36.65 4.18
4362 4466 4.697352 CCATTCCAAATCTCTTCAAGACGT 59.303 41.667 0.00 0.00 36.65 4.34
4363 4467 5.163814 CCATTCCAAATCTCTTCAAGACGTC 60.164 44.000 7.70 7.70 36.65 4.34
4364 4468 4.873746 TCCAAATCTCTTCAAGACGTCT 57.126 40.909 13.58 13.58 36.65 4.18
4365 4469 4.810790 TCCAAATCTCTTCAAGACGTCTC 58.189 43.478 20.33 0.00 36.65 3.36
4366 4470 3.929610 CCAAATCTCTTCAAGACGTCTCC 59.070 47.826 20.33 0.00 36.65 3.71
4367 4471 3.495670 AATCTCTTCAAGACGTCTCCG 57.504 47.619 20.33 13.44 36.65 4.63
4376 4480 4.738829 ACGTCTCCGTCCTAGCTT 57.261 55.556 0.00 0.00 46.28 3.74
4377 4481 2.181584 ACGTCTCCGTCCTAGCTTG 58.818 57.895 0.00 0.00 46.28 4.01
4378 4482 0.322277 ACGTCTCCGTCCTAGCTTGA 60.322 55.000 0.00 0.00 46.28 3.02
4379 4483 0.809385 CGTCTCCGTCCTAGCTTGAA 59.191 55.000 0.00 0.00 0.00 2.69
4380 4484 1.467713 CGTCTCCGTCCTAGCTTGAAC 60.468 57.143 0.00 0.00 0.00 3.18
4381 4485 1.819903 GTCTCCGTCCTAGCTTGAACT 59.180 52.381 0.00 0.00 0.00 3.01
4382 4486 1.819288 TCTCCGTCCTAGCTTGAACTG 59.181 52.381 0.00 0.00 0.00 3.16
4383 4487 0.246635 TCCGTCCTAGCTTGAACTGC 59.753 55.000 0.00 0.00 0.00 4.40
4384 4488 0.741221 CCGTCCTAGCTTGAACTGCC 60.741 60.000 0.00 0.00 0.00 4.85
4385 4489 0.741221 CGTCCTAGCTTGAACTGCCC 60.741 60.000 0.00 0.00 0.00 5.36
4386 4490 0.615850 GTCCTAGCTTGAACTGCCCT 59.384 55.000 0.00 0.00 0.00 5.19
4387 4491 0.905357 TCCTAGCTTGAACTGCCCTC 59.095 55.000 0.00 0.00 0.00 4.30
4388 4492 0.908198 CCTAGCTTGAACTGCCCTCT 59.092 55.000 0.00 0.00 0.00 3.69
4389 4493 1.134551 CCTAGCTTGAACTGCCCTCTC 60.135 57.143 0.00 0.00 0.00 3.20
4390 4494 1.830477 CTAGCTTGAACTGCCCTCTCT 59.170 52.381 0.00 0.00 0.00 3.10
4391 4495 0.612744 AGCTTGAACTGCCCTCTCTC 59.387 55.000 0.00 0.00 0.00 3.20
4392 4496 0.392327 GCTTGAACTGCCCTCTCTCC 60.392 60.000 0.00 0.00 0.00 3.71
4393 4497 1.274712 CTTGAACTGCCCTCTCTCCT 58.725 55.000 0.00 0.00 0.00 3.69
4394 4498 1.627834 CTTGAACTGCCCTCTCTCCTT 59.372 52.381 0.00 0.00 0.00 3.36
4395 4499 1.734655 TGAACTGCCCTCTCTCCTTT 58.265 50.000 0.00 0.00 0.00 3.11
4396 4500 1.625818 TGAACTGCCCTCTCTCCTTTC 59.374 52.381 0.00 0.00 0.00 2.62
4397 4501 1.625818 GAACTGCCCTCTCTCCTTTCA 59.374 52.381 0.00 0.00 0.00 2.69
4398 4502 0.980423 ACTGCCCTCTCTCCTTTCAC 59.020 55.000 0.00 0.00 0.00 3.18
4399 4503 0.251634 CTGCCCTCTCTCCTTTCACC 59.748 60.000 0.00 0.00 0.00 4.02
4400 4504 1.201429 TGCCCTCTCTCCTTTCACCC 61.201 60.000 0.00 0.00 0.00 4.61
4401 4505 1.901085 CCCTCTCTCCTTTCACCCG 59.099 63.158 0.00 0.00 0.00 5.28
4402 4506 0.905337 CCCTCTCTCCTTTCACCCGT 60.905 60.000 0.00 0.00 0.00 5.28
4403 4507 0.533032 CCTCTCTCCTTTCACCCGTC 59.467 60.000 0.00 0.00 0.00 4.79
4404 4508 1.551452 CTCTCTCCTTTCACCCGTCT 58.449 55.000 0.00 0.00 0.00 4.18
4405 4509 1.474879 CTCTCTCCTTTCACCCGTCTC 59.525 57.143 0.00 0.00 0.00 3.36
4406 4510 1.075698 TCTCTCCTTTCACCCGTCTCT 59.924 52.381 0.00 0.00 0.00 3.10
4407 4511 1.896465 CTCTCCTTTCACCCGTCTCTT 59.104 52.381 0.00 0.00 0.00 2.85
4408 4512 1.893801 TCTCCTTTCACCCGTCTCTTC 59.106 52.381 0.00 0.00 0.00 2.87
4409 4513 0.974383 TCCTTTCACCCGTCTCTTCC 59.026 55.000 0.00 0.00 0.00 3.46
4410 4514 0.389948 CCTTTCACCCGTCTCTTCCG 60.390 60.000 0.00 0.00 0.00 4.30
4411 4515 1.005394 TTTCACCCGTCTCTTCCGC 60.005 57.895 0.00 0.00 0.00 5.54
4412 4516 1.750341 TTTCACCCGTCTCTTCCGCA 61.750 55.000 0.00 0.00 0.00 5.69
4413 4517 2.430382 TTCACCCGTCTCTTCCGCAC 62.430 60.000 0.00 0.00 0.00 5.34
4414 4518 2.915659 ACCCGTCTCTTCCGCACA 60.916 61.111 0.00 0.00 0.00 4.57
4415 4519 2.125912 CCCGTCTCTTCCGCACAG 60.126 66.667 0.00 0.00 0.00 3.66
4416 4520 2.651361 CCGTCTCTTCCGCACAGT 59.349 61.111 0.00 0.00 0.00 3.55
4417 4521 1.006102 CCGTCTCTTCCGCACAGTT 60.006 57.895 0.00 0.00 0.00 3.16
4418 4522 1.284982 CCGTCTCTTCCGCACAGTTG 61.285 60.000 0.00 0.00 0.00 3.16
4419 4523 0.597637 CGTCTCTTCCGCACAGTTGT 60.598 55.000 0.00 0.00 0.00 3.32
4420 4524 1.140816 GTCTCTTCCGCACAGTTGTC 58.859 55.000 0.00 0.00 0.00 3.18
4421 4525 0.750249 TCTCTTCCGCACAGTTGTCA 59.250 50.000 0.00 0.00 0.00 3.58
4422 4526 0.861837 CTCTTCCGCACAGTTGTCAC 59.138 55.000 0.00 0.00 0.00 3.67
4423 4527 0.531974 TCTTCCGCACAGTTGTCACC 60.532 55.000 0.00 0.00 0.00 4.02
4424 4528 1.831389 CTTCCGCACAGTTGTCACCG 61.831 60.000 0.00 0.00 0.00 4.94
4425 4529 2.581208 TTCCGCACAGTTGTCACCGT 62.581 55.000 0.00 0.00 0.00 4.83
4426 4530 1.300311 CCGCACAGTTGTCACCGTA 60.300 57.895 0.00 0.00 0.00 4.02
4427 4531 1.282248 CCGCACAGTTGTCACCGTAG 61.282 60.000 0.00 0.00 0.00 3.51
4428 4532 0.318360 CGCACAGTTGTCACCGTAGA 60.318 55.000 0.00 0.00 0.00 2.59
4429 4533 1.668919 CGCACAGTTGTCACCGTAGAT 60.669 52.381 0.00 0.00 0.00 1.98
4430 4534 1.993370 GCACAGTTGTCACCGTAGATC 59.007 52.381 0.00 0.00 0.00 2.75
4431 4535 2.607187 CACAGTTGTCACCGTAGATCC 58.393 52.381 0.00 0.00 0.00 3.36
4432 4536 1.201647 ACAGTTGTCACCGTAGATCCG 59.798 52.381 0.00 0.00 0.00 4.18
4433 4537 0.172803 AGTTGTCACCGTAGATCCGC 59.827 55.000 0.00 0.00 0.00 5.54
4434 4538 0.804933 GTTGTCACCGTAGATCCGCC 60.805 60.000 0.00 0.00 0.00 6.13
4435 4539 2.025727 GTCACCGTAGATCCGCCG 59.974 66.667 0.00 0.00 0.00 6.46
4436 4540 3.896133 TCACCGTAGATCCGCCGC 61.896 66.667 0.00 0.00 0.00 6.53
4437 4541 4.944372 CACCGTAGATCCGCCGCC 62.944 72.222 0.00 0.00 0.00 6.13
4439 4543 4.944372 CCGTAGATCCGCCGCCAC 62.944 72.222 0.00 0.00 0.00 5.01
4440 4544 4.944372 CGTAGATCCGCCGCCACC 62.944 72.222 0.00 0.00 0.00 4.61
4441 4545 4.603946 GTAGATCCGCCGCCACCC 62.604 72.222 0.00 0.00 0.00 4.61
4442 4546 4.853142 TAGATCCGCCGCCACCCT 62.853 66.667 0.00 0.00 0.00 4.34
4443 4547 3.440162 TAGATCCGCCGCCACCCTA 62.440 63.158 0.00 0.00 0.00 3.53
4444 4548 4.301027 GATCCGCCGCCACCCTAG 62.301 72.222 0.00 0.00 0.00 3.02
4448 4552 4.587189 CGCCGCCACCCTAGCTAC 62.587 72.222 0.00 0.00 0.00 3.58
4449 4553 3.467226 GCCGCCACCCTAGCTACA 61.467 66.667 0.00 0.00 0.00 2.74
4450 4554 2.808206 GCCGCCACCCTAGCTACAT 61.808 63.158 0.00 0.00 0.00 2.29
4451 4555 1.367840 CCGCCACCCTAGCTACATC 59.632 63.158 0.00 0.00 0.00 3.06
4452 4556 1.399744 CCGCCACCCTAGCTACATCA 61.400 60.000 0.00 0.00 0.00 3.07
4453 4557 0.681733 CGCCACCCTAGCTACATCAT 59.318 55.000 0.00 0.00 0.00 2.45
4454 4558 1.070758 CGCCACCCTAGCTACATCATT 59.929 52.381 0.00 0.00 0.00 2.57
4455 4559 2.498167 GCCACCCTAGCTACATCATTG 58.502 52.381 0.00 0.00 0.00 2.82
4456 4560 2.158755 GCCACCCTAGCTACATCATTGT 60.159 50.000 0.00 0.00 39.98 2.71
4457 4561 3.733337 CCACCCTAGCTACATCATTGTC 58.267 50.000 0.00 0.00 37.28 3.18
4458 4562 3.389329 CCACCCTAGCTACATCATTGTCT 59.611 47.826 0.00 0.00 37.28 3.41
4459 4563 4.375272 CACCCTAGCTACATCATTGTCTG 58.625 47.826 0.00 0.00 37.28 3.51
4460 4564 3.389329 ACCCTAGCTACATCATTGTCTGG 59.611 47.826 0.00 0.00 37.28 3.86
4461 4565 3.244353 CCCTAGCTACATCATTGTCTGGG 60.244 52.174 0.00 0.00 37.28 4.45
4462 4566 3.389329 CCTAGCTACATCATTGTCTGGGT 59.611 47.826 0.00 0.00 37.28 4.51
4463 4567 3.272574 AGCTACATCATTGTCTGGGTG 57.727 47.619 0.00 0.00 37.28 4.61
4464 4568 1.672881 GCTACATCATTGTCTGGGTGC 59.327 52.381 0.00 0.00 37.28 5.01
4465 4569 2.292267 CTACATCATTGTCTGGGTGCC 58.708 52.381 0.00 0.00 37.28 5.01
4466 4570 0.323725 ACATCATTGTCTGGGTGCCC 60.324 55.000 0.00 0.00 0.00 5.36
4467 4571 1.039233 CATCATTGTCTGGGTGCCCC 61.039 60.000 4.59 3.42 45.71 5.80
4477 4581 2.444895 GGTGCCCCAACCCACAAA 60.445 61.111 0.00 0.00 33.79 2.83
4478 4582 2.506957 GGTGCCCCAACCCACAAAG 61.507 63.158 0.00 0.00 33.79 2.77
4479 4583 1.760480 GTGCCCCAACCCACAAAGT 60.760 57.895 0.00 0.00 32.37 2.66
4480 4584 1.456705 TGCCCCAACCCACAAAGTC 60.457 57.895 0.00 0.00 0.00 3.01
4481 4585 2.561037 GCCCCAACCCACAAAGTCG 61.561 63.158 0.00 0.00 0.00 4.18
4482 4586 2.561037 CCCCAACCCACAAAGTCGC 61.561 63.158 0.00 0.00 0.00 5.19
4483 4587 2.561037 CCCAACCCACAAAGTCGCC 61.561 63.158 0.00 0.00 0.00 5.54
4484 4588 1.826054 CCAACCCACAAAGTCGCCA 60.826 57.895 0.00 0.00 0.00 5.69
4485 4589 1.388065 CCAACCCACAAAGTCGCCAA 61.388 55.000 0.00 0.00 0.00 4.52
4486 4590 0.248866 CAACCCACAAAGTCGCCAAC 60.249 55.000 0.00 0.00 0.00 3.77
4487 4591 1.388837 AACCCACAAAGTCGCCAACC 61.389 55.000 0.00 0.00 0.00 3.77
4488 4592 2.637025 CCACAAAGTCGCCAACCG 59.363 61.111 0.00 0.00 38.61 4.44
4489 4593 2.184167 CCACAAAGTCGCCAACCGT 61.184 57.895 0.00 0.00 38.35 4.83
4490 4594 1.010125 CACAAAGTCGCCAACCGTG 60.010 57.895 0.00 0.00 38.35 4.94
4491 4595 2.051345 CAAAGTCGCCAACCGTGC 60.051 61.111 0.00 0.00 38.35 5.34
4492 4596 2.203153 AAAGTCGCCAACCGTGCT 60.203 55.556 0.00 0.00 38.35 4.40
4493 4597 2.542907 AAAGTCGCCAACCGTGCTG 61.543 57.895 0.00 0.00 38.35 4.41
4494 4598 3.750373 AAGTCGCCAACCGTGCTGT 62.750 57.895 0.00 0.00 38.35 4.40
4495 4599 3.712881 GTCGCCAACCGTGCTGTC 61.713 66.667 0.00 0.00 38.35 3.51
4496 4600 4.228567 TCGCCAACCGTGCTGTCA 62.229 61.111 0.00 0.00 38.35 3.58
4497 4601 4.012895 CGCCAACCGTGCTGTCAC 62.013 66.667 0.00 0.00 39.78 3.67
4498 4602 3.660111 GCCAACCGTGCTGTCACC 61.660 66.667 0.00 0.00 40.04 4.02
4499 4603 3.345808 CCAACCGTGCTGTCACCG 61.346 66.667 0.00 0.00 40.04 4.94
4500 4604 3.345808 CAACCGTGCTGTCACCGG 61.346 66.667 0.00 0.00 40.04 5.28
4501 4605 3.542676 AACCGTGCTGTCACCGGA 61.543 61.111 9.46 0.00 40.04 5.14
4502 4606 3.802418 AACCGTGCTGTCACCGGAC 62.802 63.158 9.46 0.00 44.57 4.79
4514 4618 4.667519 GTCACCGGACAAGGTCTTATAT 57.332 45.455 9.46 0.00 43.89 0.86
4515 4619 4.369182 GTCACCGGACAAGGTCTTATATG 58.631 47.826 9.46 0.00 43.89 1.78
4516 4620 4.028131 TCACCGGACAAGGTCTTATATGT 58.972 43.478 9.46 0.00 43.89 2.29
4517 4621 4.098960 TCACCGGACAAGGTCTTATATGTC 59.901 45.833 9.46 0.00 43.89 3.06
4518 4622 4.028131 ACCGGACAAGGTCTTATATGTCA 58.972 43.478 9.46 0.00 41.46 3.58
4519 4623 4.142004 ACCGGACAAGGTCTTATATGTCAC 60.142 45.833 9.46 0.00 41.46 3.67
4520 4624 4.099573 CCGGACAAGGTCTTATATGTCACT 59.900 45.833 0.00 0.00 43.02 3.41
4521 4625 5.282510 CGGACAAGGTCTTATATGTCACTC 58.717 45.833 7.03 0.00 43.02 3.51
4522 4626 5.067936 CGGACAAGGTCTTATATGTCACTCT 59.932 44.000 7.03 0.00 43.02 3.24
4523 4627 6.405953 CGGACAAGGTCTTATATGTCACTCTT 60.406 42.308 7.03 0.00 43.02 2.85
4524 4628 6.981559 GGACAAGGTCTTATATGTCACTCTTC 59.018 42.308 7.03 0.00 43.02 2.87
4525 4629 6.879400 ACAAGGTCTTATATGTCACTCTTCC 58.121 40.000 0.00 0.00 0.00 3.46
4526 4630 5.776173 AGGTCTTATATGTCACTCTTCCG 57.224 43.478 0.00 0.00 0.00 4.30
4527 4631 4.585162 AGGTCTTATATGTCACTCTTCCGG 59.415 45.833 0.00 0.00 0.00 5.14
4528 4632 4.583489 GGTCTTATATGTCACTCTTCCGGA 59.417 45.833 0.00 0.00 0.00 5.14
4529 4633 5.507650 GGTCTTATATGTCACTCTTCCGGAC 60.508 48.000 1.83 0.00 0.00 4.79
4530 4634 5.067413 GTCTTATATGTCACTCTTCCGGACA 59.933 44.000 1.83 0.00 44.73 4.02
4534 4638 2.521126 TGTCACTCTTCCGGACATACA 58.479 47.619 1.83 0.00 36.69 2.29
4535 4639 2.230508 TGTCACTCTTCCGGACATACAC 59.769 50.000 1.83 0.00 36.69 2.90
4536 4640 2.230508 GTCACTCTTCCGGACATACACA 59.769 50.000 1.83 0.00 0.00 3.72
4537 4641 3.096852 TCACTCTTCCGGACATACACAT 58.903 45.455 1.83 0.00 0.00 3.21
4538 4642 3.513912 TCACTCTTCCGGACATACACATT 59.486 43.478 1.83 0.00 0.00 2.71
4539 4643 3.618594 CACTCTTCCGGACATACACATTG 59.381 47.826 1.83 0.00 0.00 2.82
4540 4644 3.198068 CTCTTCCGGACATACACATTGG 58.802 50.000 1.83 0.00 0.00 3.16
4541 4645 2.093181 TCTTCCGGACATACACATTGGG 60.093 50.000 1.83 0.00 0.00 4.12
4542 4646 0.107410 TCCGGACATACACATTGGGC 60.107 55.000 0.00 0.00 0.00 5.36
4543 4647 0.107214 CCGGACATACACATTGGGCT 60.107 55.000 0.00 0.00 0.00 5.19
4544 4648 1.299541 CGGACATACACATTGGGCTC 58.700 55.000 0.00 0.00 0.00 4.70
4545 4649 1.134401 CGGACATACACATTGGGCTCT 60.134 52.381 0.00 0.00 0.00 4.09
4546 4650 2.102420 CGGACATACACATTGGGCTCTA 59.898 50.000 0.00 0.00 0.00 2.43
4547 4651 3.244215 CGGACATACACATTGGGCTCTAT 60.244 47.826 0.00 0.00 0.00 1.98
4548 4652 4.067896 GGACATACACATTGGGCTCTATG 58.932 47.826 6.46 6.46 33.42 2.23
4549 4653 4.444876 GGACATACACATTGGGCTCTATGT 60.445 45.833 7.92 7.92 39.30 2.29
4554 4658 4.100707 CACATTGGGCTCTATGTGTTTG 57.899 45.455 26.87 7.35 45.41 2.93
4555 4659 3.758023 CACATTGGGCTCTATGTGTTTGA 59.242 43.478 26.87 0.00 45.41 2.69
4556 4660 3.758554 ACATTGGGCTCTATGTGTTTGAC 59.241 43.478 13.09 0.00 37.80 3.18
4557 4661 2.093306 TGGGCTCTATGTGTTTGACG 57.907 50.000 0.00 0.00 0.00 4.35
4558 4662 1.338674 TGGGCTCTATGTGTTTGACGG 60.339 52.381 0.00 0.00 0.00 4.79
4559 4663 1.066430 GGGCTCTATGTGTTTGACGGA 60.066 52.381 0.00 0.00 0.00 4.69
4560 4664 2.614481 GGGCTCTATGTGTTTGACGGAA 60.614 50.000 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 6.200286 ACAAAATATTACCGATGTCGCTAGTG 59.800 38.462 0.00 0.00 38.18 2.74
51 54 8.707839 CAAGTTTTGCAACAAAATATTACCGAT 58.292 29.630 0.00 0.00 35.05 4.18
100 103 5.534278 TCACAATCTTTGCAACCAGACATAA 59.466 36.000 0.00 0.00 0.00 1.90
158 165 4.521256 GTCTAGACTAGTGCCATCCTTAGG 59.479 50.000 15.91 0.00 0.00 2.69
159 166 5.381757 AGTCTAGACTAGTGCCATCCTTAG 58.618 45.833 24.04 0.00 40.43 2.18
211 221 7.497925 AAGAGGTGAACAACTTTTAGTCATC 57.502 36.000 0.00 0.00 0.00 2.92
337 347 1.863454 CCGCTGAACATACAGATCTGC 59.137 52.381 22.83 5.75 39.94 4.26
343 353 1.204704 TGTCTCCCGCTGAACATACAG 59.795 52.381 0.00 0.00 40.43 2.74
345 355 2.380084 TTGTCTCCCGCTGAACATAC 57.620 50.000 0.00 0.00 0.00 2.39
374 384 7.525688 AATCATCACACATAACTTGTAGTCG 57.474 36.000 0.00 0.00 36.57 4.18
384 394 9.356433 CAATAGTTGCAAAATCATCACACATAA 57.644 29.630 0.00 0.00 0.00 1.90
393 403 9.128107 CGTTCTTTACAATAGTTGCAAAATCAT 57.872 29.630 0.00 0.00 0.00 2.45
415 425 3.427528 TCACAGTTACGCTCAATTCGTTC 59.572 43.478 0.00 0.00 40.89 3.95
422 432 2.831685 ACCATCACAGTTACGCTCAA 57.168 45.000 0.00 0.00 0.00 3.02
443 453 7.228590 ACCACCAATGCTAAGTCTAAAACTTA 58.771 34.615 0.00 0.00 46.55 2.24
448 458 5.001232 GTGACCACCAATGCTAAGTCTAAA 58.999 41.667 0.00 0.00 0.00 1.85
453 463 2.949177 TGTGACCACCAATGCTAAGT 57.051 45.000 0.00 0.00 0.00 2.24
492 502 4.202141 CCAAATGCACATCACCGGAATAAT 60.202 41.667 9.46 0.00 0.00 1.28
495 505 1.477700 CCAAATGCACATCACCGGAAT 59.522 47.619 9.46 0.00 0.00 3.01
498 508 1.132262 GTACCAAATGCACATCACCGG 59.868 52.381 0.00 0.00 0.00 5.28
510 520 4.570772 CGGAAATGTCTCATCGTACCAAAT 59.429 41.667 0.00 0.00 0.00 2.32
513 523 2.494471 ACGGAAATGTCTCATCGTACCA 59.506 45.455 0.00 0.00 0.00 3.25
514 524 3.114065 GACGGAAATGTCTCATCGTACC 58.886 50.000 0.00 0.00 35.95 3.34
517 527 2.993899 GTTGACGGAAATGTCTCATCGT 59.006 45.455 0.00 0.00 39.64 3.73
521 531 4.066646 TGAAGTTGACGGAAATGTCTCA 57.933 40.909 0.00 0.00 39.64 3.27
529 539 0.941542 CGCCTTTGAAGTTGACGGAA 59.058 50.000 0.00 0.00 0.00 4.30
530 540 0.179067 ACGCCTTTGAAGTTGACGGA 60.179 50.000 0.00 0.00 0.00 4.69
532 542 2.468532 AAACGCCTTTGAAGTTGACG 57.531 45.000 0.00 0.00 0.00 4.35
536 546 2.625790 TGCCATAAACGCCTTTGAAGTT 59.374 40.909 0.00 0.00 0.00 2.66
546 556 5.861787 AGATTAACAAAGTTGCCATAAACGC 59.138 36.000 0.00 0.00 35.13 4.84
552 562 7.669722 TCCTCTTAAGATTAACAAAGTTGCCAT 59.330 33.333 5.44 0.00 0.00 4.40
565 575 9.976776 TTAGAGACTGAGTTCCTCTTAAGATTA 57.023 33.333 5.44 0.00 38.20 1.75
576 586 3.793797 GGCTCTTAGAGACTGAGTTCC 57.206 52.381 14.14 0.00 34.31 3.62
591 601 1.694048 CCCTCACCCTATGAAGGCTCT 60.694 57.143 0.00 0.00 42.14 4.09
656 667 6.341316 AGCTTTTCTTTGTCCCTTTTCTTTC 58.659 36.000 0.00 0.00 0.00 2.62
702 739 7.897800 CGTCAGTTTTTCTTCCAACAATTTTTC 59.102 33.333 0.00 0.00 0.00 2.29
706 743 4.803613 GCGTCAGTTTTTCTTCCAACAATT 59.196 37.500 0.00 0.00 0.00 2.32
743 780 1.286354 GCGTGTTAGCAACGCCACTA 61.286 55.000 9.65 0.00 45.77 2.74
754 791 1.060713 CCGTCTGAACTGCGTGTTAG 58.939 55.000 0.00 0.00 39.30 2.34
838 878 1.129917 TTTTGTGTACCACGGAGGGA 58.870 50.000 1.11 0.00 43.89 4.20
890 931 1.820481 GAGGTCGGTCGAGAGGAGG 60.820 68.421 0.00 0.00 0.00 4.30
913 954 0.106318 GGGAGACGCCTAGGGAAGTA 60.106 60.000 11.72 0.00 36.66 2.24
1195 1238 0.838987 AACGAGCAAACCTAGGGGGA 60.839 55.000 14.81 0.00 38.76 4.81
1206 1249 1.516386 GATCGAGCCGAACGAGCAA 60.516 57.895 0.00 0.00 43.90 3.91
1295 1339 1.192146 TCTCCTTCCACTGGTTCCCG 61.192 60.000 0.00 0.00 0.00 5.14
1391 1435 0.378610 GGTTGGCGCAGATCTTAAGC 59.621 55.000 10.83 0.00 0.00 3.09
1422 1466 5.192327 AGCAAAATCTGAGGAAACAACTG 57.808 39.130 0.00 0.00 0.00 3.16
1460 1505 4.221482 TGAATCTACTTGAAGCAGCTGAGA 59.779 41.667 20.43 9.02 0.00 3.27
1496 1541 1.837439 TCAAGGCCATAACCGTCAGAT 59.163 47.619 5.01 0.00 33.69 2.90
1500 1545 1.141053 AGGATCAAGGCCATAACCGTC 59.859 52.381 5.01 0.00 33.69 4.79
1523 1568 1.063806 GTCGAGATCACTGCACACAC 58.936 55.000 0.00 0.00 0.00 3.82
1675 1720 0.889186 AGACACACCCATGCGGAAAC 60.889 55.000 7.17 0.00 34.64 2.78
1683 1728 1.600636 CCACGCAAGACACACCCAT 60.601 57.895 0.00 0.00 43.62 4.00
1702 1747 2.417243 GCATGTTATCCAACCAAGCCAC 60.417 50.000 0.00 0.00 33.41 5.01
1705 1750 4.199310 TCTAGCATGTTATCCAACCAAGC 58.801 43.478 0.00 0.00 33.41 4.01
1815 1860 3.119990 ACGTGGTCAAGACAAAACACAAG 60.120 43.478 2.29 0.00 0.00 3.16
1832 1877 7.707774 ATTGGTAAAAGAAAAATTCACGTGG 57.292 32.000 17.00 0.00 0.00 4.94
1852 1897 7.010738 CACTGAGCCTTGCAAATAATAAATTGG 59.989 37.037 0.00 0.00 0.00 3.16
1860 1905 3.153369 TCCACTGAGCCTTGCAAATAA 57.847 42.857 0.00 0.00 0.00 1.40
1866 1911 1.307097 GATGATCCACTGAGCCTTGC 58.693 55.000 0.00 0.00 0.00 4.01
1868 1913 1.134159 GCTGATGATCCACTGAGCCTT 60.134 52.381 0.00 0.00 0.00 4.35
1879 1924 9.241317 CCTAAATATGTTGTTTTGCTGATGATC 57.759 33.333 0.00 0.00 0.00 2.92
2070 2115 0.387929 TGGTCGTGTCACCTTCACTC 59.612 55.000 0.00 0.00 37.34 3.51
2126 2171 9.528018 GAAGAACCTTGAATGTTACAAATTCAA 57.472 29.630 11.91 11.91 46.55 2.69
2201 2246 5.527951 TGTGGACTACAGCAAAACGATAAAA 59.472 36.000 0.00 0.00 33.42 1.52
2206 2251 2.605837 TGTGGACTACAGCAAAACGA 57.394 45.000 0.00 0.00 33.42 3.85
2207 2252 2.095768 CCATGTGGACTACAGCAAAACG 60.096 50.000 0.00 0.00 43.80 3.60
2242 2288 7.022055 TGTGACCACTAACATAAACAAAGTG 57.978 36.000 1.62 0.00 37.81 3.16
2243 2289 6.262273 CCTGTGACCACTAACATAAACAAAGT 59.738 38.462 1.62 0.00 0.00 2.66
2430 2477 6.016276 TGCAACTTCTCATCCCTAAAAAGTTC 60.016 38.462 0.00 0.00 35.41 3.01
2506 2554 6.802834 GGAAACAACACGAAACAAAAGAACTA 59.197 34.615 0.00 0.00 0.00 2.24
2530 2578 1.734655 ATCATGGCTACTAGTGGGGG 58.265 55.000 5.39 0.00 0.00 5.40
2783 2852 5.126545 TGCAGGAGAGACGTTATAGCTAAAA 59.873 40.000 0.00 0.00 0.00 1.52
2796 2865 1.836802 AGGGAGATTTGCAGGAGAGAC 59.163 52.381 0.00 0.00 0.00 3.36
2919 2993 2.660064 AAGTAGCTCCGCCTGGGTG 61.660 63.158 0.00 0.00 37.00 4.61
2928 3002 5.186198 ACCACATATCAAACAAGTAGCTCC 58.814 41.667 0.00 0.00 0.00 4.70
2964 3038 3.203716 CTGCTGCTTGAATATGCTCAGA 58.796 45.455 0.00 0.00 34.01 3.27
2991 3065 0.685097 GTTGTCCTGCTAGTGGGTGA 59.315 55.000 4.49 0.00 0.00 4.02
3042 3116 1.470494 CTACGCAGCTCTCTTCTGACA 59.530 52.381 0.00 0.00 33.54 3.58
3059 3133 4.787735 TCCACTGGGAGAGCCTAC 57.212 61.111 0.00 0.00 38.64 3.18
3151 3226 5.381757 TGCAGGTGTGTTTAGTTCCTAAAT 58.618 37.500 0.25 0.00 38.07 1.40
3248 3324 4.047822 GAGCATCAGCACACTATCACTAC 58.952 47.826 0.00 0.00 45.49 2.73
3287 3363 5.741388 ACTAGTTTCAAAGTCTGCACTTG 57.259 39.130 0.00 0.00 42.45 3.16
3407 3486 1.912371 CTTCTTCGCTTTCACCGCCC 61.912 60.000 0.00 0.00 0.00 6.13
3437 3516 3.254024 TTTCTCCAGCAGTCCGGCC 62.254 63.158 0.00 0.00 0.00 6.13
3440 3519 2.028930 ACTAAGTTTCTCCAGCAGTCCG 60.029 50.000 0.00 0.00 0.00 4.79
3506 3585 2.167281 TGTCTCCTTGCTAGCATCAGTC 59.833 50.000 20.13 12.28 0.00 3.51
3542 3621 0.117340 ACTACTCTGAGGGGGCTGTT 59.883 55.000 9.85 0.00 0.00 3.16
3613 3692 1.410004 AGGACCGACAAACTGACTCA 58.590 50.000 0.00 0.00 0.00 3.41
3688 3767 3.031013 TCAAGACACCTTCTGACTGTCA 58.969 45.455 10.50 10.50 37.39 3.58
3786 3866 3.068024 GCAAGACAACACCATCCAAAAGA 59.932 43.478 0.00 0.00 0.00 2.52
3823 3903 7.851228 ACTCAATACTCATGGACTACATTTCA 58.149 34.615 0.00 0.00 37.84 2.69
3943 4026 3.382546 AGGAACTGGCATATCAAATGTGC 59.617 43.478 0.55 0.55 45.32 4.57
3967 4050 6.791303 TCACATGTAAGAAGAACAAACCAAC 58.209 36.000 0.00 0.00 0.00 3.77
3978 4061 8.434416 AAGGAACTGCTTCTCACATGTAAGAAG 61.434 40.741 27.98 27.98 44.45 2.85
3999 4082 9.810545 CAAACTTTATAAGAACAAACCAAGGAA 57.189 29.630 0.00 0.00 0.00 3.36
4016 4099 9.793259 TCCAAATCTACTGACTTCAAACTTTAT 57.207 29.630 0.00 0.00 0.00 1.40
4017 4100 9.793259 ATCCAAATCTACTGACTTCAAACTTTA 57.207 29.630 0.00 0.00 0.00 1.85
4057 4160 7.483691 CGCAACTAAGTTTTCTTTTGTACAGTT 59.516 33.333 0.00 0.00 40.91 3.16
4091 4194 0.381801 GGCACCAAATATGCTCCGTG 59.618 55.000 0.00 0.00 42.93 4.94
4177 4281 2.563179 CGAGGGGTCCTATTGTAGATGG 59.437 54.545 0.00 0.00 31.76 3.51
4187 4291 2.698075 GGAGGGTCGAGGGGTCCTA 61.698 68.421 0.00 0.00 31.76 2.94
4188 4292 4.077180 GGAGGGTCGAGGGGTCCT 62.077 72.222 0.00 0.00 36.03 3.85
4190 4294 3.075641 GTGGAGGGTCGAGGGGTC 61.076 72.222 0.00 0.00 0.00 4.46
4208 4312 0.608640 CCGGACATATAGGTGGAGCC 59.391 60.000 0.00 0.00 37.58 4.70
4209 4313 0.608640 CCCGGACATATAGGTGGAGC 59.391 60.000 0.73 0.00 0.00 4.70
4210 4314 2.011122 ACCCGGACATATAGGTGGAG 57.989 55.000 0.73 0.00 0.00 3.86
4211 4315 2.718062 TCTACCCGGACATATAGGTGGA 59.282 50.000 0.73 0.00 37.52 4.02
4212 4316 3.165087 TCTACCCGGACATATAGGTGG 57.835 52.381 0.73 0.00 33.70 4.61
4213 4317 4.341487 TCATCTACCCGGACATATAGGTG 58.659 47.826 0.73 3.36 33.70 4.00
4214 4318 4.044317 ACTCATCTACCCGGACATATAGGT 59.956 45.833 0.73 0.00 36.36 3.08
4215 4319 4.601084 ACTCATCTACCCGGACATATAGG 58.399 47.826 0.73 0.00 0.00 2.57
4216 4320 4.641094 GGACTCATCTACCCGGACATATAG 59.359 50.000 0.73 0.00 0.00 1.31
4217 4321 4.291513 AGGACTCATCTACCCGGACATATA 59.708 45.833 0.73 0.00 0.00 0.86
4218 4322 3.076182 AGGACTCATCTACCCGGACATAT 59.924 47.826 0.73 0.00 0.00 1.78
4219 4323 2.445905 AGGACTCATCTACCCGGACATA 59.554 50.000 0.73 0.00 0.00 2.29
4220 4324 1.218196 AGGACTCATCTACCCGGACAT 59.782 52.381 0.73 0.00 0.00 3.06
4221 4325 0.629596 AGGACTCATCTACCCGGACA 59.370 55.000 0.73 0.00 0.00 4.02
4222 4326 2.653234 TAGGACTCATCTACCCGGAC 57.347 55.000 0.73 0.00 0.00 4.79
4223 4327 2.445905 ACATAGGACTCATCTACCCGGA 59.554 50.000 0.73 0.00 0.00 5.14
4224 4328 2.820787 GACATAGGACTCATCTACCCGG 59.179 54.545 0.00 0.00 0.00 5.73
4225 4329 2.820787 GGACATAGGACTCATCTACCCG 59.179 54.545 0.00 0.00 0.00 5.28
4226 4330 3.845860 TGGACATAGGACTCATCTACCC 58.154 50.000 0.00 0.00 0.00 3.69
4227 4331 5.329399 AGATGGACATAGGACTCATCTACC 58.671 45.833 0.00 0.00 41.62 3.18
4229 4333 7.336475 AGTAGATGGACATAGGACTCATCTA 57.664 40.000 11.06 11.06 42.79 1.98
4230 4334 6.212840 AGTAGATGGACATAGGACTCATCT 57.787 41.667 12.40 12.40 44.38 2.90
4231 4335 5.123186 CGAGTAGATGGACATAGGACTCATC 59.877 48.000 15.29 0.00 33.09 2.92
4232 4336 5.007034 CGAGTAGATGGACATAGGACTCAT 58.993 45.833 15.29 0.00 33.09 2.90
4233 4337 4.390264 CGAGTAGATGGACATAGGACTCA 58.610 47.826 15.29 0.00 33.09 3.41
4234 4338 3.754323 CCGAGTAGATGGACATAGGACTC 59.246 52.174 9.17 9.17 0.00 3.36
4235 4339 3.138653 ACCGAGTAGATGGACATAGGACT 59.861 47.826 0.00 0.00 0.00 3.85
4236 4340 3.488363 ACCGAGTAGATGGACATAGGAC 58.512 50.000 0.00 0.00 0.00 3.85
4237 4341 3.137728 TGACCGAGTAGATGGACATAGGA 59.862 47.826 0.00 0.00 0.00 2.94
4238 4342 3.487372 TGACCGAGTAGATGGACATAGG 58.513 50.000 0.00 0.00 0.00 2.57
4239 4343 4.762251 TCATGACCGAGTAGATGGACATAG 59.238 45.833 0.00 0.00 38.32 2.23
4240 4344 4.725490 TCATGACCGAGTAGATGGACATA 58.275 43.478 0.00 0.00 38.32 2.29
4241 4345 3.566351 TCATGACCGAGTAGATGGACAT 58.434 45.455 0.00 0.00 40.45 3.06
4242 4346 3.012934 TCATGACCGAGTAGATGGACA 57.987 47.619 0.00 0.00 34.57 4.02
4243 4347 4.386867 TTTCATGACCGAGTAGATGGAC 57.613 45.455 0.00 0.00 0.00 4.02
4244 4348 4.382685 GGTTTTCATGACCGAGTAGATGGA 60.383 45.833 0.00 0.00 0.00 3.41
4245 4349 3.871594 GGTTTTCATGACCGAGTAGATGG 59.128 47.826 0.00 0.00 0.00 3.51
4246 4350 4.568359 CAGGTTTTCATGACCGAGTAGATG 59.432 45.833 0.00 0.00 42.11 2.90
4247 4351 4.223032 ACAGGTTTTCATGACCGAGTAGAT 59.777 41.667 0.00 0.00 42.11 1.98
4248 4352 3.576982 ACAGGTTTTCATGACCGAGTAGA 59.423 43.478 0.00 0.00 42.11 2.59
4249 4353 3.926616 ACAGGTTTTCATGACCGAGTAG 58.073 45.455 0.00 0.00 42.11 2.57
4250 4354 3.306502 GGACAGGTTTTCATGACCGAGTA 60.307 47.826 0.00 0.00 42.11 2.59
4251 4355 2.550208 GGACAGGTTTTCATGACCGAGT 60.550 50.000 0.00 0.00 42.11 4.18
4252 4356 2.076863 GGACAGGTTTTCATGACCGAG 58.923 52.381 0.00 0.00 42.11 4.63
4253 4357 2.178912 GGACAGGTTTTCATGACCGA 57.821 50.000 0.00 0.00 42.11 4.69
4255 4359 4.589908 ACATAGGACAGGTTTTCATGACC 58.410 43.478 0.00 0.00 44.08 4.02
4256 4360 4.636206 GGACATAGGACAGGTTTTCATGAC 59.364 45.833 0.00 0.00 35.42 3.06
4257 4361 4.622933 CGGACATAGGACAGGTTTTCATGA 60.623 45.833 0.00 0.00 35.42 3.07
4258 4362 3.623060 CGGACATAGGACAGGTTTTCATG 59.377 47.826 0.00 0.00 37.63 3.07
4259 4363 3.370527 CCGGACATAGGACAGGTTTTCAT 60.371 47.826 0.00 0.00 0.00 2.57
4260 4364 2.027561 CCGGACATAGGACAGGTTTTCA 60.028 50.000 0.00 0.00 0.00 2.69
4261 4365 2.629051 CCGGACATAGGACAGGTTTTC 58.371 52.381 0.00 0.00 0.00 2.29
4262 4366 1.280998 CCCGGACATAGGACAGGTTTT 59.719 52.381 0.73 0.00 0.00 2.43
4263 4367 0.909623 CCCGGACATAGGACAGGTTT 59.090 55.000 0.73 0.00 0.00 3.27
4264 4368 1.623542 GCCCGGACATAGGACAGGTT 61.624 60.000 0.73 0.00 0.00 3.50
4265 4369 2.064581 GCCCGGACATAGGACAGGT 61.065 63.158 0.73 0.00 0.00 4.00
4266 4370 1.762460 AGCCCGGACATAGGACAGG 60.762 63.158 0.73 0.00 0.00 4.00
4267 4371 1.330655 ACAGCCCGGACATAGGACAG 61.331 60.000 0.73 0.00 0.00 3.51
4268 4372 1.305802 ACAGCCCGGACATAGGACA 60.306 57.895 0.73 0.00 0.00 4.02
4269 4373 1.144057 CACAGCCCGGACATAGGAC 59.856 63.158 0.73 0.00 0.00 3.85
4270 4374 2.063979 CCACAGCCCGGACATAGGA 61.064 63.158 0.73 0.00 0.00 2.94
4271 4375 2.505982 CCACAGCCCGGACATAGG 59.494 66.667 0.73 0.00 0.00 2.57
4272 4376 2.203070 GCCACAGCCCGGACATAG 60.203 66.667 0.73 0.00 0.00 2.23
4273 4377 3.006133 TGCCACAGCCCGGACATA 61.006 61.111 0.73 0.00 38.69 2.29
4274 4378 4.722700 GTGCCACAGCCCGGACAT 62.723 66.667 0.73 0.00 38.69 3.06
4276 4380 4.643387 AAGTGCCACAGCCCGGAC 62.643 66.667 0.73 0.00 38.69 4.79
4277 4381 4.329545 GAAGTGCCACAGCCCGGA 62.330 66.667 0.73 0.00 38.69 5.14
4278 4382 4.641645 TGAAGTGCCACAGCCCGG 62.642 66.667 0.00 0.00 38.69 5.73
4279 4383 1.733402 TTTTGAAGTGCCACAGCCCG 61.733 55.000 0.00 0.00 38.69 6.13
4280 4384 0.463620 TTTTTGAAGTGCCACAGCCC 59.536 50.000 0.00 0.00 38.69 5.19
4281 4385 2.407090 GATTTTTGAAGTGCCACAGCC 58.593 47.619 0.00 0.00 38.69 4.85
4282 4386 2.224018 TGGATTTTTGAAGTGCCACAGC 60.224 45.455 0.00 0.00 40.48 4.40
4283 4387 3.731652 TGGATTTTTGAAGTGCCACAG 57.268 42.857 0.00 0.00 0.00 3.66
4284 4388 3.431486 GGTTGGATTTTTGAAGTGCCACA 60.431 43.478 0.00 0.00 0.00 4.17
4285 4389 3.130633 GGTTGGATTTTTGAAGTGCCAC 58.869 45.455 0.00 0.00 0.00 5.01
4286 4390 2.103941 GGGTTGGATTTTTGAAGTGCCA 59.896 45.455 0.00 0.00 0.00 4.92
4287 4391 2.103941 TGGGTTGGATTTTTGAAGTGCC 59.896 45.455 0.00 0.00 0.00 5.01
4288 4392 3.467374 TGGGTTGGATTTTTGAAGTGC 57.533 42.857 0.00 0.00 0.00 4.40
4289 4393 4.751098 CACATGGGTTGGATTTTTGAAGTG 59.249 41.667 0.00 0.00 0.00 3.16
4290 4394 4.408596 ACACATGGGTTGGATTTTTGAAGT 59.591 37.500 0.00 0.00 0.00 3.01
4291 4395 4.751098 CACACATGGGTTGGATTTTTGAAG 59.249 41.667 0.00 0.00 0.00 3.02
4292 4396 4.444022 CCACACATGGGTTGGATTTTTGAA 60.444 41.667 0.00 0.00 43.04 2.69
4293 4397 3.070734 CCACACATGGGTTGGATTTTTGA 59.929 43.478 0.00 0.00 43.04 2.69
4294 4398 3.401182 CCACACATGGGTTGGATTTTTG 58.599 45.455 0.00 0.00 43.04 2.44
4295 4399 3.767902 CCACACATGGGTTGGATTTTT 57.232 42.857 0.00 0.00 43.04 1.94
4306 4410 2.040278 CCCTATATCCACCCACACATGG 59.960 54.545 0.00 0.00 46.81 3.66
4307 4411 2.978978 TCCCTATATCCACCCACACATG 59.021 50.000 0.00 0.00 0.00 3.21
4308 4412 2.979678 GTCCCTATATCCACCCACACAT 59.020 50.000 0.00 0.00 0.00 3.21
4309 4413 2.404559 GTCCCTATATCCACCCACACA 58.595 52.381 0.00 0.00 0.00 3.72
4310 4414 1.343465 CGTCCCTATATCCACCCACAC 59.657 57.143 0.00 0.00 0.00 3.82
4311 4415 1.712056 CGTCCCTATATCCACCCACA 58.288 55.000 0.00 0.00 0.00 4.17
4312 4416 0.974383 CCGTCCCTATATCCACCCAC 59.026 60.000 0.00 0.00 0.00 4.61
4313 4417 0.178915 CCCGTCCCTATATCCACCCA 60.179 60.000 0.00 0.00 0.00 4.51
4314 4418 0.115745 TCCCGTCCCTATATCCACCC 59.884 60.000 0.00 0.00 0.00 4.61
4315 4419 2.019807 TTCCCGTCCCTATATCCACC 57.980 55.000 0.00 0.00 0.00 4.61
4316 4420 2.236395 CCATTCCCGTCCCTATATCCAC 59.764 54.545 0.00 0.00 0.00 4.02
4317 4421 2.158066 ACCATTCCCGTCCCTATATCCA 60.158 50.000 0.00 0.00 0.00 3.41
4318 4422 2.500504 GACCATTCCCGTCCCTATATCC 59.499 54.545 0.00 0.00 0.00 2.59
4319 4423 2.500504 GGACCATTCCCGTCCCTATATC 59.499 54.545 0.00 0.00 43.48 1.63
4320 4424 2.547990 GGACCATTCCCGTCCCTATAT 58.452 52.381 0.00 0.00 43.48 0.86
4321 4425 2.019807 GGACCATTCCCGTCCCTATA 57.980 55.000 0.00 0.00 43.48 1.31
4322 4426 2.850016 GGACCATTCCCGTCCCTAT 58.150 57.895 0.00 0.00 43.48 2.57
4323 4427 4.386591 GGACCATTCCCGTCCCTA 57.613 61.111 0.00 0.00 43.48 3.53
4332 4436 5.653769 TGAAGAGATTTGGAATGGACCATTC 59.346 40.000 31.38 31.38 46.52 2.67
4333 4437 5.582953 TGAAGAGATTTGGAATGGACCATT 58.417 37.500 19.92 19.92 39.82 3.16
4334 4438 5.197224 TGAAGAGATTTGGAATGGACCAT 57.803 39.130 0.00 0.00 39.82 3.55
4335 4439 4.656100 TGAAGAGATTTGGAATGGACCA 57.344 40.909 0.00 0.00 38.24 4.02
4336 4440 5.124617 GTCTTGAAGAGATTTGGAATGGACC 59.875 44.000 0.00 0.00 36.61 4.46
4337 4441 5.163814 CGTCTTGAAGAGATTTGGAATGGAC 60.164 44.000 0.00 0.00 36.61 4.02
4338 4442 4.937620 CGTCTTGAAGAGATTTGGAATGGA 59.062 41.667 0.00 0.00 36.61 3.41
4339 4443 4.697352 ACGTCTTGAAGAGATTTGGAATGG 59.303 41.667 0.00 0.00 36.61 3.16
4340 4444 5.641209 AGACGTCTTGAAGAGATTTGGAATG 59.359 40.000 13.58 0.00 36.61 2.67
4341 4445 5.799213 AGACGTCTTGAAGAGATTTGGAAT 58.201 37.500 13.58 0.00 36.61 3.01
4342 4446 5.215252 AGACGTCTTGAAGAGATTTGGAA 57.785 39.130 13.58 0.00 36.61 3.53
4343 4447 4.322049 GGAGACGTCTTGAAGAGATTTGGA 60.322 45.833 21.08 0.00 36.61 3.53
4344 4448 3.929610 GGAGACGTCTTGAAGAGATTTGG 59.070 47.826 21.08 0.00 36.61 3.28
4361 4465 1.819903 AGTTCAAGCTAGGACGGAGAC 59.180 52.381 0.00 0.00 0.00 3.36
4362 4466 1.819288 CAGTTCAAGCTAGGACGGAGA 59.181 52.381 0.00 0.00 0.00 3.71
4363 4467 1.737363 GCAGTTCAAGCTAGGACGGAG 60.737 57.143 0.00 0.00 0.00 4.63
4364 4468 0.246635 GCAGTTCAAGCTAGGACGGA 59.753 55.000 0.00 0.00 0.00 4.69
4365 4469 0.741221 GGCAGTTCAAGCTAGGACGG 60.741 60.000 0.00 0.00 0.00 4.79
4366 4470 0.741221 GGGCAGTTCAAGCTAGGACG 60.741 60.000 0.00 0.00 0.00 4.79
4367 4471 0.615850 AGGGCAGTTCAAGCTAGGAC 59.384 55.000 0.00 0.00 0.00 3.85
4368 4472 0.905357 GAGGGCAGTTCAAGCTAGGA 59.095 55.000 0.00 0.00 0.00 2.94
4369 4473 0.908198 AGAGGGCAGTTCAAGCTAGG 59.092 55.000 0.00 0.00 0.00 3.02
4370 4474 1.830477 AGAGAGGGCAGTTCAAGCTAG 59.170 52.381 0.00 0.00 0.00 3.42
4371 4475 1.827969 GAGAGAGGGCAGTTCAAGCTA 59.172 52.381 0.00 0.00 0.00 3.32
4372 4476 0.612744 GAGAGAGGGCAGTTCAAGCT 59.387 55.000 0.00 0.00 0.00 3.74
4373 4477 0.392327 GGAGAGAGGGCAGTTCAAGC 60.392 60.000 0.00 0.00 0.00 4.01
4374 4478 1.274712 AGGAGAGAGGGCAGTTCAAG 58.725 55.000 0.00 0.00 0.00 3.02
4375 4479 1.734655 AAGGAGAGAGGGCAGTTCAA 58.265 50.000 0.00 0.00 0.00 2.69
4376 4480 1.625818 GAAAGGAGAGAGGGCAGTTCA 59.374 52.381 0.00 0.00 0.00 3.18
4377 4481 1.625818 TGAAAGGAGAGAGGGCAGTTC 59.374 52.381 0.00 0.00 0.00 3.01
4378 4482 1.349357 GTGAAAGGAGAGAGGGCAGTT 59.651 52.381 0.00 0.00 0.00 3.16
4379 4483 0.980423 GTGAAAGGAGAGAGGGCAGT 59.020 55.000 0.00 0.00 0.00 4.40
4380 4484 0.251634 GGTGAAAGGAGAGAGGGCAG 59.748 60.000 0.00 0.00 0.00 4.85
4381 4485 1.201429 GGGTGAAAGGAGAGAGGGCA 61.201 60.000 0.00 0.00 0.00 5.36
4382 4486 1.604915 GGGTGAAAGGAGAGAGGGC 59.395 63.158 0.00 0.00 0.00 5.19
4383 4487 0.905337 ACGGGTGAAAGGAGAGAGGG 60.905 60.000 0.00 0.00 0.00 4.30
4384 4488 0.533032 GACGGGTGAAAGGAGAGAGG 59.467 60.000 0.00 0.00 0.00 3.69
4385 4489 1.474879 GAGACGGGTGAAAGGAGAGAG 59.525 57.143 0.00 0.00 0.00 3.20
4386 4490 1.075698 AGAGACGGGTGAAAGGAGAGA 59.924 52.381 0.00 0.00 0.00 3.10
4387 4491 1.551452 AGAGACGGGTGAAAGGAGAG 58.449 55.000 0.00 0.00 0.00 3.20
4388 4492 1.893801 GAAGAGACGGGTGAAAGGAGA 59.106 52.381 0.00 0.00 0.00 3.71
4389 4493 1.066787 GGAAGAGACGGGTGAAAGGAG 60.067 57.143 0.00 0.00 0.00 3.69
4390 4494 0.974383 GGAAGAGACGGGTGAAAGGA 59.026 55.000 0.00 0.00 0.00 3.36
4391 4495 0.389948 CGGAAGAGACGGGTGAAAGG 60.390 60.000 0.00 0.00 0.00 3.11
4392 4496 1.014564 GCGGAAGAGACGGGTGAAAG 61.015 60.000 0.00 0.00 0.00 2.62
4393 4497 1.005394 GCGGAAGAGACGGGTGAAA 60.005 57.895 0.00 0.00 0.00 2.69
4394 4498 2.204461 TGCGGAAGAGACGGGTGAA 61.204 57.895 0.00 0.00 0.00 3.18
4395 4499 2.599281 TGCGGAAGAGACGGGTGA 60.599 61.111 0.00 0.00 0.00 4.02
4396 4500 2.432628 GTGCGGAAGAGACGGGTG 60.433 66.667 0.00 0.00 0.00 4.61
4397 4501 2.915659 TGTGCGGAAGAGACGGGT 60.916 61.111 0.00 0.00 0.00 5.28
4398 4502 2.125912 CTGTGCGGAAGAGACGGG 60.126 66.667 0.00 0.00 0.00 5.28
4399 4503 1.006102 AACTGTGCGGAAGAGACGG 60.006 57.895 0.00 0.00 0.00 4.79
4400 4504 0.597637 ACAACTGTGCGGAAGAGACG 60.598 55.000 0.00 0.00 0.00 4.18
4401 4505 1.140816 GACAACTGTGCGGAAGAGAC 58.859 55.000 0.00 0.00 0.00 3.36
4402 4506 0.750249 TGACAACTGTGCGGAAGAGA 59.250 50.000 0.00 0.00 0.00 3.10
4403 4507 0.861837 GTGACAACTGTGCGGAAGAG 59.138 55.000 0.00 0.00 0.00 2.85
4404 4508 0.531974 GGTGACAACTGTGCGGAAGA 60.532 55.000 0.00 0.00 0.00 2.87
4405 4509 1.831389 CGGTGACAACTGTGCGGAAG 61.831 60.000 0.00 0.00 0.00 3.46
4406 4510 1.885388 CGGTGACAACTGTGCGGAA 60.885 57.895 0.00 0.00 0.00 4.30
4407 4511 1.736365 TACGGTGACAACTGTGCGGA 61.736 55.000 0.59 0.00 45.74 5.54
4408 4512 1.282248 CTACGGTGACAACTGTGCGG 61.282 60.000 0.59 0.00 45.74 5.69
4409 4513 0.318360 TCTACGGTGACAACTGTGCG 60.318 55.000 0.59 0.00 45.74 5.34
4410 4514 1.993370 GATCTACGGTGACAACTGTGC 59.007 52.381 0.59 0.00 45.74 4.57
4411 4515 2.607187 GGATCTACGGTGACAACTGTG 58.393 52.381 0.59 0.00 45.74 3.66
4413 4517 1.909376 CGGATCTACGGTGACAACTG 58.091 55.000 0.00 0.00 38.76 3.16
4414 4518 0.172803 GCGGATCTACGGTGACAACT 59.827 55.000 0.00 0.00 0.00 3.16
4415 4519 0.804933 GGCGGATCTACGGTGACAAC 60.805 60.000 0.00 0.00 0.00 3.32
4416 4520 1.514087 GGCGGATCTACGGTGACAA 59.486 57.895 0.00 0.00 0.00 3.18
4417 4521 2.767445 CGGCGGATCTACGGTGACA 61.767 63.158 0.00 0.00 0.00 3.58
4418 4522 2.025727 CGGCGGATCTACGGTGAC 59.974 66.667 0.00 0.00 0.00 3.67
4419 4523 3.896133 GCGGCGGATCTACGGTGA 61.896 66.667 9.78 0.00 0.00 4.02
4420 4524 4.944372 GGCGGCGGATCTACGGTG 62.944 72.222 9.78 0.00 0.00 4.94
4422 4526 4.944372 GTGGCGGCGGATCTACGG 62.944 72.222 9.78 0.00 0.00 4.02
4423 4527 4.944372 GGTGGCGGCGGATCTACG 62.944 72.222 9.78 0.00 0.00 3.51
4424 4528 4.603946 GGGTGGCGGCGGATCTAC 62.604 72.222 9.78 0.00 0.00 2.59
4425 4529 3.440162 TAGGGTGGCGGCGGATCTA 62.440 63.158 9.78 0.78 0.00 1.98
4426 4530 4.853142 TAGGGTGGCGGCGGATCT 62.853 66.667 9.78 1.80 0.00 2.75
4427 4531 4.301027 CTAGGGTGGCGGCGGATC 62.301 72.222 9.78 0.00 0.00 3.36
4431 4535 4.587189 GTAGCTAGGGTGGCGGCG 62.587 72.222 0.51 0.51 34.52 6.46
4432 4536 2.717139 GATGTAGCTAGGGTGGCGGC 62.717 65.000 0.00 0.00 34.52 6.53
4433 4537 1.367840 GATGTAGCTAGGGTGGCGG 59.632 63.158 0.00 0.00 34.52 6.13
4434 4538 0.681733 ATGATGTAGCTAGGGTGGCG 59.318 55.000 0.00 0.00 34.52 5.69
4435 4539 2.158755 ACAATGATGTAGCTAGGGTGGC 60.159 50.000 0.00 0.00 38.24 5.01
4436 4540 3.389329 AGACAATGATGTAGCTAGGGTGG 59.611 47.826 0.00 0.00 40.74 4.61
4437 4541 4.375272 CAGACAATGATGTAGCTAGGGTG 58.625 47.826 0.00 0.00 40.74 4.61
4438 4542 3.389329 CCAGACAATGATGTAGCTAGGGT 59.611 47.826 0.00 0.00 40.74 4.34
4439 4543 3.244353 CCCAGACAATGATGTAGCTAGGG 60.244 52.174 0.00 0.00 40.74 3.53
4440 4544 3.389329 ACCCAGACAATGATGTAGCTAGG 59.611 47.826 0.00 0.00 40.74 3.02
4441 4545 4.375272 CACCCAGACAATGATGTAGCTAG 58.625 47.826 0.00 0.00 40.74 3.42
4442 4546 3.432186 GCACCCAGACAATGATGTAGCTA 60.432 47.826 0.00 0.00 40.74 3.32
4443 4547 2.681976 GCACCCAGACAATGATGTAGCT 60.682 50.000 0.00 0.00 40.74 3.32
4444 4548 1.672881 GCACCCAGACAATGATGTAGC 59.327 52.381 0.00 0.00 40.74 3.58
4445 4549 2.292267 GGCACCCAGACAATGATGTAG 58.708 52.381 0.00 0.00 40.74 2.74
4446 4550 2.418368 GGCACCCAGACAATGATGTA 57.582 50.000 0.00 0.00 40.74 2.29
4447 4551 3.271250 GGCACCCAGACAATGATGT 57.729 52.632 0.00 0.00 44.25 3.06
4461 4565 1.744320 GACTTTGTGGGTTGGGGCAC 61.744 60.000 0.00 0.00 0.00 5.01
4462 4566 1.456705 GACTTTGTGGGTTGGGGCA 60.457 57.895 0.00 0.00 0.00 5.36
4463 4567 2.561037 CGACTTTGTGGGTTGGGGC 61.561 63.158 0.00 0.00 0.00 5.80
4464 4568 2.561037 GCGACTTTGTGGGTTGGGG 61.561 63.158 0.00 0.00 0.00 4.96
4465 4569 2.561037 GGCGACTTTGTGGGTTGGG 61.561 63.158 0.00 0.00 0.00 4.12
4466 4570 1.388065 TTGGCGACTTTGTGGGTTGG 61.388 55.000 0.00 0.00 0.00 3.77
4467 4571 0.248866 GTTGGCGACTTTGTGGGTTG 60.249 55.000 0.00 0.00 0.00 3.77
4468 4572 1.388837 GGTTGGCGACTTTGTGGGTT 61.389 55.000 4.59 0.00 0.00 4.11
4469 4573 1.826487 GGTTGGCGACTTTGTGGGT 60.826 57.895 4.59 0.00 0.00 4.51
4470 4574 2.903547 CGGTTGGCGACTTTGTGGG 61.904 63.158 4.59 0.00 0.00 4.61
4471 4575 2.184167 ACGGTTGGCGACTTTGTGG 61.184 57.895 4.59 0.00 0.00 4.17
4472 4576 1.010125 CACGGTTGGCGACTTTGTG 60.010 57.895 4.59 7.78 0.00 3.33
4473 4577 2.830285 GCACGGTTGGCGACTTTGT 61.830 57.895 4.59 0.00 0.00 2.83
4474 4578 2.051345 GCACGGTTGGCGACTTTG 60.051 61.111 4.59 3.57 0.00 2.77
4475 4579 2.203153 AGCACGGTTGGCGACTTT 60.203 55.556 4.59 0.00 36.08 2.66
4476 4580 2.972505 CAGCACGGTTGGCGACTT 60.973 61.111 4.59 0.00 36.08 3.01
4477 4581 4.235762 ACAGCACGGTTGGCGACT 62.236 61.111 4.59 0.00 36.08 4.18
4478 4582 3.712881 GACAGCACGGTTGGCGAC 61.713 66.667 0.00 0.00 36.08 5.19
4479 4583 4.228567 TGACAGCACGGTTGGCGA 62.229 61.111 0.00 0.00 36.08 5.54
4480 4584 4.012895 GTGACAGCACGGTTGGCG 62.013 66.667 0.00 0.00 34.94 5.69
4481 4585 3.660111 GGTGACAGCACGGTTGGC 61.660 66.667 0.00 0.00 46.09 4.52
4482 4586 3.345808 CGGTGACAGCACGGTTGG 61.346 66.667 5.35 0.00 46.09 3.77
4483 4587 3.345808 CCGGTGACAGCACGGTTG 61.346 66.667 5.35 0.00 46.09 3.77
4484 4588 3.542676 TCCGGTGACAGCACGGTT 61.543 61.111 0.00 0.00 46.09 4.44
4485 4589 4.295119 GTCCGGTGACAGCACGGT 62.295 66.667 0.00 0.00 46.09 4.83
4486 4590 4.293648 TGTCCGGTGACAGCACGG 62.294 66.667 0.00 6.16 46.40 4.94
4493 4597 4.142004 ACATATAAGACCTTGTCCGGTGAC 60.142 45.833 0.00 0.00 42.12 3.67
4494 4598 4.028131 ACATATAAGACCTTGTCCGGTGA 58.972 43.478 0.00 0.00 37.42 4.02
4495 4599 4.142026 TGACATATAAGACCTTGTCCGGTG 60.142 45.833 0.00 0.00 38.12 4.94
4496 4600 4.028131 TGACATATAAGACCTTGTCCGGT 58.972 43.478 0.00 0.00 38.12 5.28
4497 4601 4.099573 AGTGACATATAAGACCTTGTCCGG 59.900 45.833 0.00 0.00 38.12 5.14
4498 4602 5.067936 AGAGTGACATATAAGACCTTGTCCG 59.932 44.000 0.00 0.00 38.12 4.79
4499 4603 6.472686 AGAGTGACATATAAGACCTTGTCC 57.527 41.667 0.00 0.00 38.12 4.02
4500 4604 6.981559 GGAAGAGTGACATATAAGACCTTGTC 59.018 42.308 0.00 0.00 39.11 3.18
4501 4605 6.405953 CGGAAGAGTGACATATAAGACCTTGT 60.406 42.308 0.00 0.00 0.00 3.16
4502 4606 5.980116 CGGAAGAGTGACATATAAGACCTTG 59.020 44.000 0.00 0.00 0.00 3.61
4503 4607 5.069251 CCGGAAGAGTGACATATAAGACCTT 59.931 44.000 0.00 0.00 0.00 3.50
4504 4608 4.585162 CCGGAAGAGTGACATATAAGACCT 59.415 45.833 0.00 0.00 0.00 3.85
4505 4609 4.583489 TCCGGAAGAGTGACATATAAGACC 59.417 45.833 0.00 0.00 0.00 3.85
4506 4610 5.067413 TGTCCGGAAGAGTGACATATAAGAC 59.933 44.000 5.23 0.00 34.28 3.01
4507 4611 5.198207 TGTCCGGAAGAGTGACATATAAGA 58.802 41.667 5.23 0.00 34.28 2.10
4508 4612 5.515797 TGTCCGGAAGAGTGACATATAAG 57.484 43.478 5.23 0.00 34.28 1.73
4512 4616 4.097437 GTGTATGTCCGGAAGAGTGACATA 59.903 45.833 5.23 5.70 45.31 2.29
4514 4618 2.230508 GTGTATGTCCGGAAGAGTGACA 59.769 50.000 5.23 0.00 42.65 3.58
4515 4619 2.230508 TGTGTATGTCCGGAAGAGTGAC 59.769 50.000 5.23 0.00 0.00 3.67
4516 4620 2.521126 TGTGTATGTCCGGAAGAGTGA 58.479 47.619 5.23 0.00 0.00 3.41
4517 4621 3.526931 ATGTGTATGTCCGGAAGAGTG 57.473 47.619 5.23 0.00 0.00 3.51
4518 4622 3.369471 CCAATGTGTATGTCCGGAAGAGT 60.369 47.826 5.23 0.00 0.00 3.24
4519 4623 3.198068 CCAATGTGTATGTCCGGAAGAG 58.802 50.000 5.23 0.00 0.00 2.85
4520 4624 2.093181 CCCAATGTGTATGTCCGGAAGA 60.093 50.000 5.23 0.00 0.00 2.87
4521 4625 2.288666 CCCAATGTGTATGTCCGGAAG 58.711 52.381 5.23 0.00 0.00 3.46
4522 4626 1.680555 GCCCAATGTGTATGTCCGGAA 60.681 52.381 5.23 0.00 0.00 4.30
4523 4627 0.107410 GCCCAATGTGTATGTCCGGA 60.107 55.000 0.00 0.00 0.00 5.14
4524 4628 0.107214 AGCCCAATGTGTATGTCCGG 60.107 55.000 0.00 0.00 0.00 5.14
4525 4629 1.134401 AGAGCCCAATGTGTATGTCCG 60.134 52.381 0.00 0.00 0.00 4.79
4526 4630 2.717639 AGAGCCCAATGTGTATGTCC 57.282 50.000 0.00 0.00 0.00 4.02
4527 4631 4.512944 CACATAGAGCCCAATGTGTATGTC 59.487 45.833 12.44 0.00 45.08 3.06
4528 4632 4.454678 CACATAGAGCCCAATGTGTATGT 58.545 43.478 12.44 1.31 45.08 2.29
4534 4638 3.758554 GTCAAACACATAGAGCCCAATGT 59.241 43.478 0.00 0.00 36.78 2.71
4535 4639 3.181507 CGTCAAACACATAGAGCCCAATG 60.182 47.826 0.00 0.00 0.00 2.82
4536 4640 3.009723 CGTCAAACACATAGAGCCCAAT 58.990 45.455 0.00 0.00 0.00 3.16
4537 4641 2.422597 CGTCAAACACATAGAGCCCAA 58.577 47.619 0.00 0.00 0.00 4.12
4538 4642 1.338674 CCGTCAAACACATAGAGCCCA 60.339 52.381 0.00 0.00 0.00 5.36
4539 4643 1.066430 TCCGTCAAACACATAGAGCCC 60.066 52.381 0.00 0.00 0.00 5.19
4540 4644 2.380084 TCCGTCAAACACATAGAGCC 57.620 50.000 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.