Multiple sequence alignment - TraesCS1A01G167100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G167100 chr1A 100.000 2762 0 0 1 2762 300002984 300005745 0.000000e+00 5101.0
1 TraesCS1A01G167100 chr1A 97.475 198 5 0 2071 2268 473806247 473806444 3.410000e-89 339.0
2 TraesCS1A01G167100 chr1B 96.060 939 32 4 1141 2077 330388735 330389670 0.000000e+00 1524.0
3 TraesCS1A01G167100 chr1B 90.625 832 37 12 339 1168 330387930 330388722 0.000000e+00 1066.0
4 TraesCS1A01G167100 chr1B 94.762 210 11 0 2066 2275 39585537 39585328 7.380000e-86 327.0
5 TraesCS1A01G167100 chr1B 95.238 42 2 0 1579 1620 615942172 615942213 1.780000e-07 67.6
6 TraesCS1A01G167100 chr1D 95.425 918 33 3 1141 2055 247330705 247329794 0.000000e+00 1454.0
7 TraesCS1A01G167100 chr1D 95.632 641 25 2 539 1177 247331348 247330709 0.000000e+00 1026.0
8 TraesCS1A01G167100 chr1D 97.143 210 5 1 339 548 247333035 247332827 1.220000e-93 353.0
9 TraesCS1A01G167100 chr1D 94.762 210 11 0 2068 2277 214374152 214374361 7.380000e-86 327.0
10 TraesCS1A01G167100 chr1D 97.674 86 2 0 2672 2757 247329071 247328986 6.160000e-32 148.0
11 TraesCS1A01G167100 chr1D 87.023 131 11 4 2350 2479 247329729 247329604 2.870000e-30 143.0
12 TraesCS1A01G167100 chr3A 98.462 195 3 0 2074 2268 99299395 99299201 7.320000e-91 344.0
13 TraesCS1A01G167100 chr3A 76.299 308 45 19 2293 2587 572569654 572569946 3.710000e-29 139.0
14 TraesCS1A01G167100 chr4A 97.970 197 4 0 2072 2268 377581718 377581914 2.630000e-90 342.0
15 TraesCS1A01G167100 chr4A 95.261 211 9 1 2067 2277 514030710 514030919 1.590000e-87 333.0
16 TraesCS1A01G167100 chr7A 97.487 199 4 1 2074 2271 619353231 619353033 3.410000e-89 339.0
17 TraesCS1A01G167100 chr2A 94.931 217 9 2 2058 2273 249493249 249493034 3.410000e-89 339.0
18 TraesCS1A01G167100 chr2A 93.304 224 14 1 2055 2278 485502781 485503003 2.050000e-86 329.0
19 TraesCS1A01G167100 chr2D 87.013 77 8 2 2477 2551 38769144 38769220 4.900000e-13 86.1
20 TraesCS1A01G167100 chr2D 92.593 54 3 1 2022 2075 647739179 647739127 2.950000e-10 76.8
21 TraesCS1A01G167100 chr5B 90.385 52 5 0 2021 2072 537527157 537527208 4.940000e-08 69.4
22 TraesCS1A01G167100 chr3B 90.476 42 4 0 1579 1620 115243973 115244014 3.840000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G167100 chr1A 300002984 300005745 2761 False 5101.0 5101 100.0000 1 2762 1 chr1A.!!$F1 2761
1 TraesCS1A01G167100 chr1B 330387930 330389670 1740 False 1295.0 1524 93.3425 339 2077 2 chr1B.!!$F2 1738
2 TraesCS1A01G167100 chr1D 247328986 247333035 4049 True 624.8 1454 94.5794 339 2757 5 chr1D.!!$R1 2418

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
265 266 0.035739 GGTTTGCGGGGACTGAACTA 59.964 55.0 0.0 0.0 36.31 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2200 3776 0.107508 CCTACTCGTAGGGTCACCGA 60.108 60.0 14.08 0.0 46.96 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.844257 ATCTAATCGAGGAAATCAAAAGAATCT 57.156 29.630 0.00 0.00 0.00 2.40
29 30 9.319143 TCTAATCGAGGAAATCAAAAGAATCTC 57.681 33.333 0.00 0.00 0.00 2.75
30 31 9.323985 CTAATCGAGGAAATCAAAAGAATCTCT 57.676 33.333 0.00 0.00 0.00 3.10
31 32 8.572855 AATCGAGGAAATCAAAAGAATCTCTT 57.427 30.769 0.00 0.00 38.59 2.85
32 33 7.602517 TCGAGGAAATCAAAAGAATCTCTTC 57.397 36.000 0.00 0.00 35.27 2.87
33 34 6.311445 TCGAGGAAATCAAAAGAATCTCTTCG 59.689 38.462 0.00 0.00 35.27 3.79
34 35 6.456181 CGAGGAAATCAAAAGAATCTCTTCGG 60.456 42.308 0.00 0.00 35.27 4.30
35 36 5.124617 AGGAAATCAAAAGAATCTCTTCGGC 59.875 40.000 0.00 0.00 35.27 5.54
36 37 4.972514 AATCAAAAGAATCTCTTCGGCC 57.027 40.909 0.00 0.00 35.27 6.13
37 38 3.703001 TCAAAAGAATCTCTTCGGCCT 57.297 42.857 0.00 0.00 35.27 5.19
38 39 4.021102 TCAAAAGAATCTCTTCGGCCTT 57.979 40.909 0.00 0.00 35.27 4.35
39 40 4.003648 TCAAAAGAATCTCTTCGGCCTTC 58.996 43.478 0.00 0.00 35.27 3.46
40 41 3.990959 AAAGAATCTCTTCGGCCTTCT 57.009 42.857 0.00 0.00 35.27 2.85
41 42 3.535280 AAGAATCTCTTCGGCCTTCTC 57.465 47.619 0.00 0.00 36.45 2.87
42 43 1.760029 AGAATCTCTTCGGCCTTCTCC 59.240 52.381 0.00 0.00 36.45 3.71
43 44 1.482593 GAATCTCTTCGGCCTTCTCCA 59.517 52.381 0.00 0.00 0.00 3.86
44 45 1.118838 ATCTCTTCGGCCTTCTCCAG 58.881 55.000 0.00 0.00 0.00 3.86
45 46 1.153469 CTCTTCGGCCTTCTCCAGC 60.153 63.158 0.00 0.00 0.00 4.85
46 47 1.610673 TCTTCGGCCTTCTCCAGCT 60.611 57.895 0.00 0.00 0.00 4.24
47 48 1.194781 TCTTCGGCCTTCTCCAGCTT 61.195 55.000 0.00 0.00 0.00 3.74
48 49 1.003355 TTCGGCCTTCTCCAGCTTG 60.003 57.895 0.00 0.00 0.00 4.01
49 50 2.437359 CGGCCTTCTCCAGCTTGG 60.437 66.667 0.00 0.00 39.43 3.61
50 51 2.959484 CGGCCTTCTCCAGCTTGGA 61.959 63.158 0.00 5.03 45.98 3.53
62 63 4.353777 TCCAGCTTGGAGTGTTCTATAGT 58.646 43.478 0.00 0.00 42.67 2.12
63 64 5.516044 TCCAGCTTGGAGTGTTCTATAGTA 58.484 41.667 0.00 0.00 42.67 1.82
64 65 5.360144 TCCAGCTTGGAGTGTTCTATAGTAC 59.640 44.000 2.71 2.71 42.67 2.73
65 66 5.274718 CAGCTTGGAGTGTTCTATAGTACG 58.725 45.833 5.20 0.00 0.00 3.67
66 67 4.338682 AGCTTGGAGTGTTCTATAGTACGG 59.661 45.833 5.20 0.00 0.00 4.02
67 68 4.337555 GCTTGGAGTGTTCTATAGTACGGA 59.662 45.833 5.20 0.00 0.00 4.69
68 69 5.505985 GCTTGGAGTGTTCTATAGTACGGAG 60.506 48.000 5.20 0.00 0.00 4.63
69 70 3.881688 TGGAGTGTTCTATAGTACGGAGC 59.118 47.826 5.20 0.00 0.00 4.70
70 71 3.881688 GGAGTGTTCTATAGTACGGAGCA 59.118 47.826 5.20 0.00 0.00 4.26
71 72 4.023878 GGAGTGTTCTATAGTACGGAGCAG 60.024 50.000 5.20 0.00 0.00 4.24
72 73 4.778579 AGTGTTCTATAGTACGGAGCAGA 58.221 43.478 5.20 0.00 0.00 4.26
73 74 5.191426 AGTGTTCTATAGTACGGAGCAGAA 58.809 41.667 5.20 0.00 0.00 3.02
74 75 5.651139 AGTGTTCTATAGTACGGAGCAGAAA 59.349 40.000 5.20 0.00 0.00 2.52
75 76 5.742926 GTGTTCTATAGTACGGAGCAGAAAC 59.257 44.000 5.20 0.00 0.00 2.78
76 77 5.416639 TGTTCTATAGTACGGAGCAGAAACA 59.583 40.000 5.20 0.00 0.00 2.83
77 78 5.752892 TCTATAGTACGGAGCAGAAACAG 57.247 43.478 0.00 0.00 0.00 3.16
78 79 3.802948 ATAGTACGGAGCAGAAACAGG 57.197 47.619 0.00 0.00 0.00 4.00
79 80 1.339097 AGTACGGAGCAGAAACAGGT 58.661 50.000 0.00 0.00 0.00 4.00
80 81 1.692519 AGTACGGAGCAGAAACAGGTT 59.307 47.619 0.00 0.00 0.00 3.50
81 82 1.798813 GTACGGAGCAGAAACAGGTTG 59.201 52.381 0.00 0.00 0.00 3.77
82 83 0.535102 ACGGAGCAGAAACAGGTTGG 60.535 55.000 0.00 0.00 0.00 3.77
83 84 1.856265 CGGAGCAGAAACAGGTTGGC 61.856 60.000 0.00 0.00 0.00 4.52
84 85 0.823356 GGAGCAGAAACAGGTTGGCA 60.823 55.000 6.53 0.00 0.00 4.92
85 86 0.312102 GAGCAGAAACAGGTTGGCAC 59.688 55.000 0.00 0.00 0.00 5.01
86 87 0.395586 AGCAGAAACAGGTTGGCACA 60.396 50.000 0.00 0.00 0.00 4.57
87 88 0.675633 GCAGAAACAGGTTGGCACAT 59.324 50.000 0.00 0.00 39.30 3.21
88 89 1.603678 GCAGAAACAGGTTGGCACATG 60.604 52.381 0.00 0.00 40.70 3.21
89 90 1.955778 CAGAAACAGGTTGGCACATGA 59.044 47.619 0.00 0.00 36.79 3.07
90 91 2.030540 CAGAAACAGGTTGGCACATGAG 60.031 50.000 0.00 0.00 36.79 2.90
91 92 1.956477 GAAACAGGTTGGCACATGAGT 59.044 47.619 0.00 0.00 36.79 3.41
101 102 2.427320 ACATGAGTGTGCAGCGGT 59.573 55.556 0.00 0.00 37.14 5.68
102 103 1.962822 ACATGAGTGTGCAGCGGTG 60.963 57.895 10.98 10.98 37.14 4.94
103 104 2.359107 ATGAGTGTGCAGCGGTGG 60.359 61.111 17.54 0.00 0.00 4.61
127 128 4.118480 GCACCGGCGATTACATGA 57.882 55.556 9.30 0.00 0.00 3.07
128 129 1.641677 GCACCGGCGATTACATGAC 59.358 57.895 9.30 0.00 0.00 3.06
129 130 1.924335 CACCGGCGATTACATGACG 59.076 57.895 9.30 0.80 0.00 4.35
130 131 0.526739 CACCGGCGATTACATGACGA 60.527 55.000 9.30 0.00 0.00 4.20
131 132 0.387929 ACCGGCGATTACATGACGAT 59.612 50.000 9.30 0.00 0.00 3.73
132 133 1.202486 ACCGGCGATTACATGACGATT 60.202 47.619 9.30 0.00 0.00 3.34
133 134 1.192312 CCGGCGATTACATGACGATTG 59.808 52.381 9.30 0.00 0.00 2.67
134 135 1.397190 CGGCGATTACATGACGATTGC 60.397 52.381 0.00 5.62 0.00 3.56
135 136 1.867233 GGCGATTACATGACGATTGCT 59.133 47.619 0.00 0.00 32.10 3.91
136 137 2.348872 GGCGATTACATGACGATTGCTG 60.349 50.000 0.00 0.00 32.10 4.41
137 138 2.348872 GCGATTACATGACGATTGCTGG 60.349 50.000 0.00 0.00 0.00 4.85
138 139 3.123050 CGATTACATGACGATTGCTGGA 58.877 45.455 0.00 0.00 0.00 3.86
139 140 3.183172 CGATTACATGACGATTGCTGGAG 59.817 47.826 0.00 0.00 0.00 3.86
140 141 1.939974 TACATGACGATTGCTGGAGC 58.060 50.000 0.00 0.00 42.50 4.70
141 142 0.745845 ACATGACGATTGCTGGAGCC 60.746 55.000 0.00 0.00 41.18 4.70
142 143 1.153086 ATGACGATTGCTGGAGCCC 60.153 57.895 0.00 0.00 41.18 5.19
143 144 2.514824 GACGATTGCTGGAGCCCC 60.515 66.667 0.00 0.00 41.18 5.80
144 145 3.011517 ACGATTGCTGGAGCCCCT 61.012 61.111 0.00 0.00 41.18 4.79
145 146 2.515523 CGATTGCTGGAGCCCCTG 60.516 66.667 0.00 0.00 41.18 4.45
146 147 3.001514 GATTGCTGGAGCCCCTGA 58.998 61.111 0.00 0.00 41.18 3.86
147 148 1.153005 GATTGCTGGAGCCCCTGAG 60.153 63.158 0.00 0.00 41.18 3.35
148 149 1.919600 GATTGCTGGAGCCCCTGAGT 61.920 60.000 0.00 0.00 41.18 3.41
149 150 2.207501 ATTGCTGGAGCCCCTGAGTG 62.208 60.000 0.00 0.00 41.18 3.51
150 151 4.792804 GCTGGAGCCCCTGAGTGC 62.793 72.222 0.00 0.00 33.65 4.40
151 152 3.324930 CTGGAGCCCCTGAGTGCA 61.325 66.667 0.00 0.00 33.65 4.57
152 153 3.618780 CTGGAGCCCCTGAGTGCAC 62.619 68.421 9.40 9.40 33.65 4.57
153 154 4.416738 GGAGCCCCTGAGTGCACC 62.417 72.222 14.63 5.76 0.00 5.01
154 155 3.640407 GAGCCCCTGAGTGCACCA 61.640 66.667 14.63 10.47 0.00 4.17
155 156 3.618780 GAGCCCCTGAGTGCACCAG 62.619 68.421 21.62 21.62 0.00 4.00
166 167 4.085876 GCACCAGGCAGATTGTGT 57.914 55.556 0.00 0.00 43.97 3.72
167 168 1.582968 GCACCAGGCAGATTGTGTG 59.417 57.895 0.00 0.00 43.97 3.82
168 169 1.174712 GCACCAGGCAGATTGTGTGT 61.175 55.000 0.00 0.00 43.97 3.72
169 170 0.594602 CACCAGGCAGATTGTGTGTG 59.405 55.000 0.00 0.00 0.00 3.82
170 171 0.473755 ACCAGGCAGATTGTGTGTGA 59.526 50.000 0.00 0.00 0.00 3.58
171 172 1.074405 ACCAGGCAGATTGTGTGTGAT 59.926 47.619 0.00 0.00 0.00 3.06
172 173 1.471287 CCAGGCAGATTGTGTGTGATG 59.529 52.381 0.00 0.00 0.00 3.07
173 174 2.429478 CAGGCAGATTGTGTGTGATGA 58.571 47.619 0.00 0.00 0.00 2.92
174 175 2.815503 CAGGCAGATTGTGTGTGATGAA 59.184 45.455 0.00 0.00 0.00 2.57
175 176 3.442625 CAGGCAGATTGTGTGTGATGAAT 59.557 43.478 0.00 0.00 0.00 2.57
176 177 3.442625 AGGCAGATTGTGTGTGATGAATG 59.557 43.478 0.00 0.00 0.00 2.67
177 178 3.192001 GGCAGATTGTGTGTGATGAATGT 59.808 43.478 0.00 0.00 0.00 2.71
178 179 4.395854 GGCAGATTGTGTGTGATGAATGTA 59.604 41.667 0.00 0.00 0.00 2.29
179 180 5.106197 GGCAGATTGTGTGTGATGAATGTAA 60.106 40.000 0.00 0.00 0.00 2.41
180 181 6.405065 GGCAGATTGTGTGTGATGAATGTAAT 60.405 38.462 0.00 0.00 0.00 1.89
181 182 7.201723 GGCAGATTGTGTGTGATGAATGTAATA 60.202 37.037 0.00 0.00 0.00 0.98
182 183 7.641411 GCAGATTGTGTGTGATGAATGTAATAC 59.359 37.037 0.00 0.00 0.00 1.89
183 184 8.124823 CAGATTGTGTGTGATGAATGTAATACC 58.875 37.037 0.00 0.00 0.00 2.73
184 185 7.828717 AGATTGTGTGTGATGAATGTAATACCA 59.171 33.333 0.00 0.00 0.00 3.25
185 186 6.735678 TGTGTGTGATGAATGTAATACCAC 57.264 37.500 0.00 0.00 0.00 4.16
186 187 5.645929 TGTGTGTGATGAATGTAATACCACC 59.354 40.000 0.00 0.00 0.00 4.61
187 188 5.645929 GTGTGTGATGAATGTAATACCACCA 59.354 40.000 0.00 0.00 0.00 4.17
188 189 6.318648 GTGTGTGATGAATGTAATACCACCAT 59.681 38.462 0.00 0.00 0.00 3.55
189 190 6.318396 TGTGTGATGAATGTAATACCACCATG 59.682 38.462 0.00 0.00 0.00 3.66
190 191 5.827267 TGTGATGAATGTAATACCACCATGG 59.173 40.000 11.19 11.19 45.02 3.66
191 192 4.826733 TGATGAATGTAATACCACCATGGC 59.173 41.667 13.04 0.00 42.67 4.40
192 193 4.242336 TGAATGTAATACCACCATGGCA 57.758 40.909 13.04 0.00 42.67 4.92
193 194 4.802307 TGAATGTAATACCACCATGGCAT 58.198 39.130 13.04 1.13 42.67 4.40
194 195 5.946486 TGAATGTAATACCACCATGGCATA 58.054 37.500 13.04 1.75 42.67 3.14
195 196 6.368805 TGAATGTAATACCACCATGGCATAA 58.631 36.000 13.04 0.00 42.67 1.90
196 197 6.489700 TGAATGTAATACCACCATGGCATAAG 59.510 38.462 13.04 0.00 42.67 1.73
197 198 5.381184 TGTAATACCACCATGGCATAAGT 57.619 39.130 13.04 4.80 42.67 2.24
198 199 5.761205 TGTAATACCACCATGGCATAAGTT 58.239 37.500 13.04 2.92 42.67 2.66
199 200 6.191315 TGTAATACCACCATGGCATAAGTTT 58.809 36.000 13.04 0.00 42.67 2.66
200 201 6.665680 TGTAATACCACCATGGCATAAGTTTT 59.334 34.615 13.04 6.42 42.67 2.43
201 202 3.959535 ACCACCATGGCATAAGTTTTG 57.040 42.857 13.04 0.00 42.67 2.44
202 203 3.505386 ACCACCATGGCATAAGTTTTGA 58.495 40.909 13.04 0.00 42.67 2.69
203 204 4.095946 ACCACCATGGCATAAGTTTTGAT 58.904 39.130 13.04 0.00 42.67 2.57
204 205 4.081531 ACCACCATGGCATAAGTTTTGATG 60.082 41.667 13.04 0.00 42.67 3.07
205 206 4.160065 CCACCATGGCATAAGTTTTGATGA 59.840 41.667 13.04 0.00 0.00 2.92
206 207 5.104374 CACCATGGCATAAGTTTTGATGAC 58.896 41.667 13.04 0.00 0.00 3.06
207 208 4.160252 ACCATGGCATAAGTTTTGATGACC 59.840 41.667 13.04 0.00 29.20 4.02
208 209 4.160065 CCATGGCATAAGTTTTGATGACCA 59.840 41.667 0.00 1.24 35.31 4.02
209 210 5.163385 CCATGGCATAAGTTTTGATGACCAT 60.163 40.000 0.00 3.26 38.95 3.55
210 211 5.327616 TGGCATAAGTTTTGATGACCATG 57.672 39.130 0.00 0.00 29.20 3.66
211 212 4.160065 TGGCATAAGTTTTGATGACCATGG 59.840 41.667 11.19 11.19 29.20 3.66
212 213 4.160252 GGCATAAGTTTTGATGACCATGGT 59.840 41.667 19.89 19.89 0.00 3.55
213 214 5.337491 GGCATAAGTTTTGATGACCATGGTT 60.337 40.000 20.85 3.15 0.00 3.67
214 215 5.807011 GCATAAGTTTTGATGACCATGGTTC 59.193 40.000 20.85 14.34 0.00 3.62
215 216 6.350445 GCATAAGTTTTGATGACCATGGTTCT 60.350 38.462 20.85 9.50 0.00 3.01
216 217 5.712152 AAGTTTTGATGACCATGGTTCTC 57.288 39.130 20.85 18.33 0.00 2.87
217 218 4.728772 AGTTTTGATGACCATGGTTCTCA 58.271 39.130 20.85 20.66 0.00 3.27
218 219 5.139727 AGTTTTGATGACCATGGTTCTCAA 58.860 37.500 26.81 26.81 31.62 3.02
219 220 5.598005 AGTTTTGATGACCATGGTTCTCAAA 59.402 36.000 31.73 31.73 37.20 2.69
220 221 6.098124 AGTTTTGATGACCATGGTTCTCAAAA 59.902 34.615 35.68 35.68 41.21 2.44
221 222 6.477053 TTTGATGACCATGGTTCTCAAAAA 57.523 33.333 32.50 21.93 36.65 1.94
243 244 2.981400 AAAATGTAAGTCCGCGTTGG 57.019 45.000 4.92 0.00 40.09 3.77
251 252 3.661911 TCCGCGTTGGATGGTTTG 58.338 55.556 4.92 0.00 43.74 2.93
252 253 2.126502 CCGCGTTGGATGGTTTGC 60.127 61.111 4.92 0.00 42.00 3.68
253 254 2.501650 CGCGTTGGATGGTTTGCG 60.502 61.111 0.00 0.00 39.57 4.85
254 255 2.126502 GCGTTGGATGGTTTGCGG 60.127 61.111 0.00 0.00 0.00 5.69
255 256 2.566010 CGTTGGATGGTTTGCGGG 59.434 61.111 0.00 0.00 0.00 6.13
256 257 2.969827 GTTGGATGGTTTGCGGGG 59.030 61.111 0.00 0.00 0.00 5.73
257 258 1.605165 GTTGGATGGTTTGCGGGGA 60.605 57.895 0.00 0.00 0.00 4.81
258 259 1.605165 TTGGATGGTTTGCGGGGAC 60.605 57.895 0.00 0.00 0.00 4.46
259 260 2.075355 TTGGATGGTTTGCGGGGACT 62.075 55.000 0.00 0.00 0.00 3.85
260 261 2.046285 GGATGGTTTGCGGGGACTG 61.046 63.158 0.00 0.00 38.10 3.51
261 262 1.002624 GATGGTTTGCGGGGACTGA 60.003 57.895 0.00 0.00 36.31 3.41
262 263 0.608035 GATGGTTTGCGGGGACTGAA 60.608 55.000 0.00 0.00 36.31 3.02
263 264 0.893727 ATGGTTTGCGGGGACTGAAC 60.894 55.000 0.00 0.00 36.31 3.18
264 265 1.228154 GGTTTGCGGGGACTGAACT 60.228 57.895 0.00 0.00 36.31 3.01
265 266 0.035739 GGTTTGCGGGGACTGAACTA 59.964 55.000 0.00 0.00 36.31 2.24
266 267 1.339727 GGTTTGCGGGGACTGAACTAT 60.340 52.381 0.00 0.00 36.31 2.12
267 268 2.093341 GGTTTGCGGGGACTGAACTATA 60.093 50.000 0.00 0.00 36.31 1.31
268 269 2.934553 GTTTGCGGGGACTGAACTATAC 59.065 50.000 0.00 0.00 36.31 1.47
269 270 1.855295 TGCGGGGACTGAACTATACA 58.145 50.000 0.00 0.00 36.31 2.29
270 271 1.754803 TGCGGGGACTGAACTATACAG 59.245 52.381 0.00 0.00 40.68 2.74
272 273 2.481449 GCGGGGACTGAACTATACAGTG 60.481 54.545 0.00 0.00 46.57 3.66
275 276 3.777465 GGACTGAACTATACAGTGCGA 57.223 47.619 0.00 0.00 46.57 5.10
276 277 4.106029 GGACTGAACTATACAGTGCGAA 57.894 45.455 0.00 0.00 46.57 4.70
277 278 4.683832 GGACTGAACTATACAGTGCGAAT 58.316 43.478 0.00 0.00 46.57 3.34
278 279 4.504461 GGACTGAACTATACAGTGCGAATG 59.496 45.833 0.00 0.00 46.57 2.67
279 280 4.433615 ACTGAACTATACAGTGCGAATGG 58.566 43.478 0.00 0.00 45.19 3.16
280 281 4.159693 ACTGAACTATACAGTGCGAATGGA 59.840 41.667 0.00 0.00 45.19 3.41
281 282 5.163405 ACTGAACTATACAGTGCGAATGGAT 60.163 40.000 0.00 0.00 45.19 3.41
282 283 5.049828 TGAACTATACAGTGCGAATGGATG 58.950 41.667 0.00 0.00 32.17 3.51
283 284 3.393800 ACTATACAGTGCGAATGGATGC 58.606 45.455 0.00 0.00 32.25 3.91
284 285 1.220529 ATACAGTGCGAATGGATGCG 58.779 50.000 0.00 0.00 0.00 4.73
285 286 0.809636 TACAGTGCGAATGGATGCGG 60.810 55.000 0.00 0.00 0.00 5.69
286 287 2.514592 AGTGCGAATGGATGCGGG 60.515 61.111 0.00 0.00 0.00 6.13
287 288 3.585990 GTGCGAATGGATGCGGGG 61.586 66.667 0.00 0.00 0.00 5.73
288 289 4.873810 TGCGAATGGATGCGGGGG 62.874 66.667 0.00 0.00 0.00 5.40
289 290 4.875713 GCGAATGGATGCGGGGGT 62.876 66.667 0.00 0.00 0.00 4.95
290 291 2.591715 CGAATGGATGCGGGGGTC 60.592 66.667 0.00 0.00 0.00 4.46
291 292 2.919043 GAATGGATGCGGGGGTCT 59.081 61.111 0.00 0.00 0.00 3.85
292 293 1.526917 GAATGGATGCGGGGGTCTG 60.527 63.158 0.00 0.00 0.00 3.51
293 294 1.983119 GAATGGATGCGGGGGTCTGA 61.983 60.000 0.00 0.00 0.00 3.27
294 295 1.355718 AATGGATGCGGGGGTCTGAT 61.356 55.000 0.00 0.00 0.00 2.90
295 296 2.060567 ATGGATGCGGGGGTCTGATG 62.061 60.000 0.00 0.00 0.00 3.07
296 297 2.443394 GGATGCGGGGGTCTGATGA 61.443 63.158 0.00 0.00 0.00 2.92
297 298 1.757306 GATGCGGGGGTCTGATGAT 59.243 57.895 0.00 0.00 0.00 2.45
298 299 0.321122 GATGCGGGGGTCTGATGATC 60.321 60.000 0.00 0.00 0.00 2.92
299 300 1.772819 ATGCGGGGGTCTGATGATCC 61.773 60.000 0.00 0.00 42.73 3.36
300 301 2.737180 CGGGGGTCTGATGATCCG 59.263 66.667 0.00 0.00 44.38 4.18
301 302 2.427753 GGGGGTCTGATGATCCGC 59.572 66.667 0.00 0.00 46.76 5.54
302 303 2.029666 GGGGTCTGATGATCCGCG 59.970 66.667 0.00 0.00 44.38 6.46
303 304 2.663188 GGGTCTGATGATCCGCGC 60.663 66.667 0.00 0.00 33.22 6.86
304 305 2.419198 GGTCTGATGATCCGCGCT 59.581 61.111 5.56 0.00 0.00 5.92
305 306 1.953138 GGTCTGATGATCCGCGCTG 60.953 63.158 5.56 0.00 0.00 5.18
306 307 1.953138 GTCTGATGATCCGCGCTGG 60.953 63.158 5.56 9.07 40.09 4.85
315 316 4.504916 CCGCGCTGGAGAGTGGAG 62.505 72.222 12.11 0.00 46.41 3.86
316 317 3.443925 CGCGCTGGAGAGTGGAGA 61.444 66.667 5.56 0.00 0.00 3.71
317 318 2.780094 CGCGCTGGAGAGTGGAGAT 61.780 63.158 5.56 0.00 0.00 2.75
318 319 1.227205 GCGCTGGAGAGTGGAGATG 60.227 63.158 0.00 0.00 0.00 2.90
319 320 1.227205 CGCTGGAGAGTGGAGATGC 60.227 63.158 0.00 0.00 0.00 3.91
320 321 1.903294 GCTGGAGAGTGGAGATGCA 59.097 57.895 0.00 0.00 0.00 3.96
321 322 0.251354 GCTGGAGAGTGGAGATGCAA 59.749 55.000 0.00 0.00 0.00 4.08
322 323 1.134159 GCTGGAGAGTGGAGATGCAAT 60.134 52.381 0.00 0.00 0.00 3.56
323 324 2.836262 CTGGAGAGTGGAGATGCAATC 58.164 52.381 0.00 0.00 46.04 2.67
489 490 4.467062 GCCGCTTGCTTTCGCTCC 62.467 66.667 0.00 0.00 36.87 4.70
520 521 2.699768 CGCCATCGCACCAACCATT 61.700 57.895 0.00 0.00 34.03 3.16
526 527 1.067084 CGCACCAACCATTGCACAA 59.933 52.632 0.00 0.00 38.76 3.33
744 2237 4.888325 AGCCTCCCTCCCATCCCG 62.888 72.222 0.00 0.00 0.00 5.14
778 2271 2.457323 AACCGCCTTTCCACCTCCA 61.457 57.895 0.00 0.00 0.00 3.86
901 2394 1.861542 TTGAAACTGCAATCCCGGCG 61.862 55.000 0.00 0.00 0.00 6.46
968 2461 4.123497 TCATATACTGTTCTTGCGTGCT 57.877 40.909 0.00 0.00 0.00 4.40
1210 2781 2.806856 CGCTTCATCTGCTGCGTCC 61.807 63.158 0.00 0.00 42.93 4.79
1222 2793 3.986006 GCGTCCTGGTGACCGTCA 61.986 66.667 0.00 0.00 41.18 4.35
1774 3345 1.599047 CTGTGATCGGCCCTTGTCT 59.401 57.895 0.00 0.00 0.00 3.41
1783 3356 1.069227 CGGCCCTTGTCTTTCTTTTCG 60.069 52.381 0.00 0.00 0.00 3.46
1827 3400 0.906775 GGTGGTTCGTTCTGGGGATA 59.093 55.000 0.00 0.00 0.00 2.59
1829 3402 1.134491 GTGGTTCGTTCTGGGGATAGG 60.134 57.143 0.00 0.00 0.00 2.57
1932 3505 2.039084 CGCCCCCTAGCATATCTTTTCT 59.961 50.000 0.00 0.00 0.00 2.52
2061 3637 2.477357 CGAGCTCAAATGCAACCTGATG 60.477 50.000 15.40 0.00 34.99 3.07
2066 3642 4.796946 GCTCAAATGCAACCTGATGAACAA 60.797 41.667 0.00 0.00 0.00 2.83
2073 3649 8.483307 AATGCAACCTGATGAACAATAAAATC 57.517 30.769 0.00 0.00 0.00 2.17
2074 3650 6.990798 TGCAACCTGATGAACAATAAAATCA 58.009 32.000 0.00 0.00 0.00 2.57
2076 3652 8.095792 TGCAACCTGATGAACAATAAAATCATT 58.904 29.630 0.00 0.00 34.10 2.57
2077 3653 8.385111 GCAACCTGATGAACAATAAAATCATTG 58.615 33.333 0.00 0.00 40.93 2.82
2089 3665 9.357652 ACAATAAAATCATTGTTGAGGAAATCG 57.642 29.630 4.95 0.00 44.75 3.34
2090 3666 9.357652 CAATAAAATCATTGTTGAGGAAATCGT 57.642 29.630 0.00 0.00 34.73 3.73
2091 3667 9.927668 AATAAAATCATTGTTGAGGAAATCGTT 57.072 25.926 0.00 0.00 34.73 3.85
2094 3670 8.742554 AAATCATTGTTGAGGAAATCGTTAAC 57.257 30.769 0.00 0.00 34.73 2.01
2095 3671 7.687941 ATCATTGTTGAGGAAATCGTTAACT 57.312 32.000 3.71 0.00 34.73 2.24
2096 3672 6.898041 TCATTGTTGAGGAAATCGTTAACTG 58.102 36.000 3.71 0.00 33.31 3.16
2097 3673 5.682943 TTGTTGAGGAAATCGTTAACTGG 57.317 39.130 3.71 0.00 33.31 4.00
2098 3674 4.710324 TGTTGAGGAAATCGTTAACTGGT 58.290 39.130 3.71 0.00 33.31 4.00
2099 3675 5.856156 TGTTGAGGAAATCGTTAACTGGTA 58.144 37.500 3.71 0.00 33.31 3.25
2100 3676 5.929992 TGTTGAGGAAATCGTTAACTGGTAG 59.070 40.000 3.71 0.00 33.31 3.18
2101 3677 4.501071 TGAGGAAATCGTTAACTGGTAGC 58.499 43.478 3.71 0.00 0.00 3.58
2102 3678 4.222145 TGAGGAAATCGTTAACTGGTAGCT 59.778 41.667 3.71 0.00 0.00 3.32
2103 3679 4.504858 AGGAAATCGTTAACTGGTAGCTG 58.495 43.478 3.71 0.00 0.00 4.24
2104 3680 3.063588 GGAAATCGTTAACTGGTAGCTGC 59.936 47.826 3.71 0.00 0.00 5.25
2105 3681 3.611766 AATCGTTAACTGGTAGCTGCT 57.388 42.857 7.57 7.57 0.00 4.24
2106 3682 2.649331 TCGTTAACTGGTAGCTGCTC 57.351 50.000 4.91 0.00 0.00 4.26
2107 3683 1.135489 TCGTTAACTGGTAGCTGCTCG 60.135 52.381 4.91 0.00 0.00 5.03
2108 3684 1.641577 GTTAACTGGTAGCTGCTCGG 58.358 55.000 4.91 0.00 0.00 4.63
2109 3685 1.067071 GTTAACTGGTAGCTGCTCGGT 60.067 52.381 4.91 0.41 0.00 4.69
2110 3686 1.263356 TAACTGGTAGCTGCTCGGTT 58.737 50.000 16.67 16.67 34.74 4.44
2111 3687 0.320771 AACTGGTAGCTGCTCGGTTG 60.321 55.000 4.91 0.00 0.00 3.77
2112 3688 1.448540 CTGGTAGCTGCTCGGTTGG 60.449 63.158 4.91 0.00 0.00 3.77
2113 3689 2.820037 GGTAGCTGCTCGGTTGGC 60.820 66.667 4.91 0.00 0.00 4.52
2114 3690 2.266055 GTAGCTGCTCGGTTGGCT 59.734 61.111 4.91 0.00 38.62 4.75
2115 3691 2.103042 GTAGCTGCTCGGTTGGCTG 61.103 63.158 4.91 0.00 36.40 4.85
2116 3692 3.315142 TAGCTGCTCGGTTGGCTGG 62.315 63.158 4.91 0.00 36.40 4.85
2118 3694 3.052082 CTGCTCGGTTGGCTGGTG 61.052 66.667 0.00 0.00 0.00 4.17
2119 3695 3.535629 CTGCTCGGTTGGCTGGTGA 62.536 63.158 0.00 0.00 0.00 4.02
2120 3696 2.743928 GCTCGGTTGGCTGGTGAG 60.744 66.667 0.00 0.00 0.00 3.51
2121 3697 2.743718 CTCGGTTGGCTGGTGAGT 59.256 61.111 0.00 0.00 0.00 3.41
2122 3698 1.972198 CTCGGTTGGCTGGTGAGTA 59.028 57.895 0.00 0.00 0.00 2.59
2123 3699 0.108615 CTCGGTTGGCTGGTGAGTAG 60.109 60.000 0.00 0.00 0.00 2.57
2124 3700 1.079127 CGGTTGGCTGGTGAGTAGG 60.079 63.158 0.00 0.00 0.00 3.18
2125 3701 1.299976 GGTTGGCTGGTGAGTAGGG 59.700 63.158 0.00 0.00 0.00 3.53
2126 3702 1.299976 GTTGGCTGGTGAGTAGGGG 59.700 63.158 0.00 0.00 0.00 4.79
2127 3703 1.159905 TTGGCTGGTGAGTAGGGGA 59.840 57.895 0.00 0.00 0.00 4.81
2128 3704 0.253160 TTGGCTGGTGAGTAGGGGAT 60.253 55.000 0.00 0.00 0.00 3.85
2129 3705 0.253160 TGGCTGGTGAGTAGGGGATT 60.253 55.000 0.00 0.00 0.00 3.01
2130 3706 1.009060 TGGCTGGTGAGTAGGGGATTA 59.991 52.381 0.00 0.00 0.00 1.75
2131 3707 2.124411 GGCTGGTGAGTAGGGGATTAA 58.876 52.381 0.00 0.00 0.00 1.40
2132 3708 2.711547 GGCTGGTGAGTAGGGGATTAAT 59.288 50.000 0.00 0.00 0.00 1.40
2133 3709 3.244596 GGCTGGTGAGTAGGGGATTAATC 60.245 52.174 6.93 6.93 0.00 1.75
2134 3710 3.555168 GCTGGTGAGTAGGGGATTAATCG 60.555 52.174 9.32 0.00 0.00 3.34
2135 3711 3.895656 CTGGTGAGTAGGGGATTAATCGA 59.104 47.826 9.32 0.00 0.00 3.59
2136 3712 3.640029 TGGTGAGTAGGGGATTAATCGAC 59.360 47.826 9.32 4.98 0.00 4.20
2137 3713 3.896272 GGTGAGTAGGGGATTAATCGACT 59.104 47.826 9.32 11.51 0.00 4.18
2138 3714 5.075493 GGTGAGTAGGGGATTAATCGACTA 58.925 45.833 9.32 10.62 0.00 2.59
2139 3715 5.537674 GGTGAGTAGGGGATTAATCGACTAA 59.462 44.000 15.28 0.00 0.00 2.24
2140 3716 6.210984 GGTGAGTAGGGGATTAATCGACTAAT 59.789 42.308 15.28 14.67 0.00 1.73
2141 3717 7.314393 GTGAGTAGGGGATTAATCGACTAATC 58.686 42.308 23.94 23.94 37.50 1.75
2154 3730 4.356162 CGACTAATCGGCAAGTTAATCG 57.644 45.455 0.00 0.00 44.99 3.34
2155 3731 3.181774 CGACTAATCGGCAAGTTAATCGG 59.818 47.826 0.00 0.00 44.99 4.18
2156 3732 2.870411 ACTAATCGGCAAGTTAATCGGC 59.130 45.455 0.00 0.00 0.00 5.54
2157 3733 1.021968 AATCGGCAAGTTAATCGGCC 58.978 50.000 0.00 0.00 42.98 6.13
2158 3734 0.107410 ATCGGCAAGTTAATCGGCCA 60.107 50.000 2.24 0.00 46.75 5.36
2159 3735 0.107410 TCGGCAAGTTAATCGGCCAT 60.107 50.000 2.24 0.00 46.75 4.40
2160 3736 0.738389 CGGCAAGTTAATCGGCCATT 59.262 50.000 2.24 4.55 46.75 3.16
2161 3737 1.134175 CGGCAAGTTAATCGGCCATTT 59.866 47.619 2.24 0.00 46.75 2.32
2162 3738 2.356382 CGGCAAGTTAATCGGCCATTTA 59.644 45.455 2.24 0.00 46.75 1.40
2163 3739 3.181495 CGGCAAGTTAATCGGCCATTTAA 60.181 43.478 2.24 3.07 46.75 1.52
2164 3740 4.499019 CGGCAAGTTAATCGGCCATTTAAT 60.499 41.667 2.24 0.00 46.75 1.40
2165 3741 4.982295 GGCAAGTTAATCGGCCATTTAATC 59.018 41.667 2.24 1.98 45.70 1.75
2166 3742 5.451242 GGCAAGTTAATCGGCCATTTAATCA 60.451 40.000 2.24 0.00 45.70 2.57
2167 3743 6.039616 GCAAGTTAATCGGCCATTTAATCAA 58.960 36.000 2.24 0.00 0.00 2.57
2168 3744 6.701400 GCAAGTTAATCGGCCATTTAATCAAT 59.299 34.615 2.24 0.00 0.00 2.57
2169 3745 7.224557 GCAAGTTAATCGGCCATTTAATCAATT 59.775 33.333 2.24 0.00 0.00 2.32
2170 3746 9.743057 CAAGTTAATCGGCCATTTAATCAATTA 57.257 29.630 2.24 0.00 0.00 1.40
2174 3750 9.619316 TTAATCGGCCATTTAATCAATTAATCG 57.381 29.630 2.24 0.00 32.78 3.34
2175 3751 6.869315 TCGGCCATTTAATCAATTAATCGA 57.131 33.333 2.24 0.00 32.78 3.59
2176 3752 7.265647 TCGGCCATTTAATCAATTAATCGAA 57.734 32.000 2.24 0.00 32.78 3.71
2177 3753 7.881142 TCGGCCATTTAATCAATTAATCGAAT 58.119 30.769 2.24 0.00 32.78 3.34
2178 3754 7.807433 TCGGCCATTTAATCAATTAATCGAATG 59.193 33.333 2.24 0.00 32.78 2.67
2179 3755 7.807433 CGGCCATTTAATCAATTAATCGAATGA 59.193 33.333 2.24 0.00 32.78 2.57
2180 3756 9.643693 GGCCATTTAATCAATTAATCGAATGAT 57.356 29.630 0.00 0.00 35.98 2.45
2195 3771 8.841444 AATCGAATGATTTTTGAGTTTATCGG 57.159 30.769 0.00 0.00 42.14 4.18
2196 3772 6.255215 TCGAATGATTTTTGAGTTTATCGGC 58.745 36.000 0.00 0.00 0.00 5.54
2197 3773 6.093495 TCGAATGATTTTTGAGTTTATCGGCT 59.907 34.615 0.00 0.00 0.00 5.52
2198 3774 7.279090 TCGAATGATTTTTGAGTTTATCGGCTA 59.721 33.333 0.00 0.00 0.00 3.93
2199 3775 7.373441 CGAATGATTTTTGAGTTTATCGGCTAC 59.627 37.037 0.00 0.00 0.00 3.58
2200 3776 7.865706 ATGATTTTTGAGTTTATCGGCTACT 57.134 32.000 0.00 0.00 0.00 2.57
2201 3777 7.303634 TGATTTTTGAGTTTATCGGCTACTC 57.696 36.000 0.00 0.00 38.96 2.59
2202 3778 5.773239 TTTTTGAGTTTATCGGCTACTCG 57.227 39.130 0.00 0.00 40.86 4.18
2203 3779 3.431922 TTGAGTTTATCGGCTACTCGG 57.568 47.619 0.00 0.00 40.86 4.63
2204 3780 2.372264 TGAGTTTATCGGCTACTCGGT 58.628 47.619 0.00 0.00 40.86 4.69
2205 3781 2.098607 TGAGTTTATCGGCTACTCGGTG 59.901 50.000 0.00 0.00 40.86 4.94
2206 3782 2.357009 GAGTTTATCGGCTACTCGGTGA 59.643 50.000 0.00 0.00 0.00 4.02
2207 3783 2.098770 AGTTTATCGGCTACTCGGTGAC 59.901 50.000 0.00 0.00 0.00 3.67
2208 3784 1.027357 TTATCGGCTACTCGGTGACC 58.973 55.000 0.00 0.00 0.00 4.02
2209 3785 0.820891 TATCGGCTACTCGGTGACCC 60.821 60.000 0.00 0.00 0.00 4.46
2210 3786 2.569218 ATCGGCTACTCGGTGACCCT 62.569 60.000 0.00 0.00 0.00 4.34
2211 3787 1.452651 CGGCTACTCGGTGACCCTA 60.453 63.158 0.00 0.00 0.00 3.53
2212 3788 1.722636 CGGCTACTCGGTGACCCTAC 61.723 65.000 0.00 0.00 0.00 3.18
2213 3789 1.722636 GGCTACTCGGTGACCCTACG 61.723 65.000 0.00 0.00 0.00 3.51
2214 3790 0.745845 GCTACTCGGTGACCCTACGA 60.746 60.000 0.00 0.00 35.14 3.43
2216 3792 4.315588 CTCGGTGACCCTACGAGT 57.684 61.111 0.00 0.00 46.43 4.18
2217 3793 3.465990 CTCGGTGACCCTACGAGTA 57.534 57.895 0.00 0.00 46.43 2.59
2218 3794 1.297664 CTCGGTGACCCTACGAGTAG 58.702 60.000 0.00 3.39 46.43 2.57
2232 3808 3.380479 CGAGTAGGGATTAATCGGCAA 57.620 47.619 9.32 0.00 43.89 4.52
2233 3809 3.318017 CGAGTAGGGATTAATCGGCAAG 58.682 50.000 9.32 0.00 43.89 4.01
2234 3810 3.243771 CGAGTAGGGATTAATCGGCAAGT 60.244 47.826 9.32 0.00 43.89 3.16
2235 3811 4.704965 GAGTAGGGATTAATCGGCAAGTT 58.295 43.478 9.32 0.00 0.00 2.66
2236 3812 5.508489 CGAGTAGGGATTAATCGGCAAGTTA 60.508 44.000 9.32 0.00 43.89 2.24
2237 3813 6.243216 AGTAGGGATTAATCGGCAAGTTAA 57.757 37.500 9.32 0.00 0.00 2.01
2238 3814 6.053650 AGTAGGGATTAATCGGCAAGTTAAC 58.946 40.000 9.32 0.00 0.00 2.01
2239 3815 5.112129 AGGGATTAATCGGCAAGTTAACT 57.888 39.130 9.32 1.12 0.00 2.24
2240 3816 4.881850 AGGGATTAATCGGCAAGTTAACTG 59.118 41.667 9.34 4.88 0.00 3.16
2241 3817 4.036380 GGGATTAATCGGCAAGTTAACTGG 59.964 45.833 9.34 7.35 0.00 4.00
2242 3818 4.638865 GGATTAATCGGCAAGTTAACTGGT 59.361 41.667 9.34 0.00 0.00 4.00
2243 3819 5.124936 GGATTAATCGGCAAGTTAACTGGTT 59.875 40.000 9.34 1.66 0.00 3.67
2244 3820 6.316890 GGATTAATCGGCAAGTTAACTGGTTA 59.683 38.462 9.34 0.65 0.00 2.85
2245 3821 7.148205 GGATTAATCGGCAAGTTAACTGGTTAA 60.148 37.037 9.34 9.79 33.48 2.01
2246 3822 7.690952 TTAATCGGCAAGTTAACTGGTTAAT 57.309 32.000 9.34 0.00 37.37 1.40
2247 3823 5.813080 ATCGGCAAGTTAACTGGTTAATC 57.187 39.130 9.34 0.00 37.37 1.75
2248 3824 3.680937 TCGGCAAGTTAACTGGTTAATCG 59.319 43.478 9.34 7.09 37.37 3.34
2249 3825 3.181514 CGGCAAGTTAACTGGTTAATCGG 60.182 47.826 9.34 0.00 37.37 4.18
2250 3826 4.004982 GGCAAGTTAACTGGTTAATCGGA 58.995 43.478 9.34 0.00 37.37 4.55
2251 3827 4.638865 GGCAAGTTAACTGGTTAATCGGAT 59.361 41.667 9.34 0.00 37.37 4.18
2252 3828 5.448632 GGCAAGTTAACTGGTTAATCGGATG 60.449 44.000 9.34 0.03 37.37 3.51
2253 3829 5.353123 GCAAGTTAACTGGTTAATCGGATGA 59.647 40.000 9.34 0.00 37.37 2.92
2254 3830 6.128117 GCAAGTTAACTGGTTAATCGGATGAA 60.128 38.462 9.34 0.00 37.37 2.57
2255 3831 7.415206 GCAAGTTAACTGGTTAATCGGATGAAT 60.415 37.037 9.34 0.00 37.37 2.57
2256 3832 8.458843 CAAGTTAACTGGTTAATCGGATGAATT 58.541 33.333 9.34 0.00 37.37 2.17
2257 3833 8.209917 AGTTAACTGGTTAATCGGATGAATTC 57.790 34.615 7.48 0.00 37.37 2.17
2258 3834 8.047310 AGTTAACTGGTTAATCGGATGAATTCT 58.953 33.333 7.48 0.00 37.37 2.40
2259 3835 8.674607 GTTAACTGGTTAATCGGATGAATTCTT 58.325 33.333 7.05 0.00 37.37 2.52
2260 3836 6.683974 ACTGGTTAATCGGATGAATTCTTG 57.316 37.500 7.05 0.00 0.00 3.02
2261 3837 6.414732 ACTGGTTAATCGGATGAATTCTTGA 58.585 36.000 7.05 0.00 0.00 3.02
2262 3838 6.884295 ACTGGTTAATCGGATGAATTCTTGAA 59.116 34.615 7.05 0.00 0.00 2.69
2263 3839 7.083875 TGGTTAATCGGATGAATTCTTGAAC 57.916 36.000 7.05 0.68 0.00 3.18
2264 3840 6.657117 TGGTTAATCGGATGAATTCTTGAACA 59.343 34.615 7.05 0.00 0.00 3.18
2265 3841 7.148255 TGGTTAATCGGATGAATTCTTGAACAG 60.148 37.037 7.05 0.00 0.00 3.16
2266 3842 5.824904 AATCGGATGAATTCTTGAACAGG 57.175 39.130 7.05 0.00 0.00 4.00
2267 3843 3.609853 TCGGATGAATTCTTGAACAGGG 58.390 45.455 7.05 0.00 0.00 4.45
2268 3844 3.263170 TCGGATGAATTCTTGAACAGGGA 59.737 43.478 7.05 0.00 0.00 4.20
2269 3845 4.009675 CGGATGAATTCTTGAACAGGGAA 58.990 43.478 7.05 0.00 0.00 3.97
2270 3846 4.641989 CGGATGAATTCTTGAACAGGGAAT 59.358 41.667 7.05 0.00 0.00 3.01
2271 3847 5.822519 CGGATGAATTCTTGAACAGGGAATA 59.177 40.000 7.05 0.00 0.00 1.75
2317 3899 9.483062 CAACAAATTCTAAAAATTTTTGTGCGA 57.517 25.926 23.36 12.54 39.65 5.10
2323 3905 8.467402 TTCTAAAAATTTTTGTGCGAAGAACA 57.533 26.923 23.36 3.55 0.00 3.18
2365 3947 5.231147 TGCTGAACAAATTTTAGCACGAAAC 59.769 36.000 10.45 0.00 39.26 2.78
2367 3949 4.735822 TGAACAAATTTTAGCACGAAACGG 59.264 37.500 0.00 0.00 0.00 4.44
2383 3965 2.767536 CGGCATTCGTGGAAGTCAT 58.232 52.632 0.00 0.00 0.00 3.06
2441 4023 8.419076 TGTTTTCAAACTAGAATTTTTGGAGC 57.581 30.769 0.00 0.00 39.59 4.70
2445 4027 4.663636 AACTAGAATTTTTGGAGCGTCG 57.336 40.909 0.00 0.00 0.00 5.12
2452 4034 2.044888 TTTTGGAGCGTCGATTTTGC 57.955 45.000 0.00 0.00 0.00 3.68
2453 4035 0.239879 TTTGGAGCGTCGATTTTGCC 59.760 50.000 0.00 0.00 0.00 4.52
2489 4107 7.644490 ACTTTCACGAATGTTATTTTGTGCTA 58.356 30.769 0.00 0.00 39.73 3.49
2490 4108 8.132362 ACTTTCACGAATGTTATTTTGTGCTAA 58.868 29.630 0.00 0.00 39.73 3.09
2506 4124 6.464895 TGTGCTAAAATTTTGCAAGCATAC 57.535 33.333 22.99 14.87 44.30 2.39
2507 4125 5.987953 TGTGCTAAAATTTTGCAAGCATACA 59.012 32.000 22.99 16.65 44.30 2.29
2512 4130 6.622833 AAAATTTTGCAAGCATACAAAGCT 57.377 29.167 1.75 0.00 45.97 3.74
2526 4144 8.764287 AGCATACAAAGCTTTTGTCAAAATTAC 58.236 29.630 9.53 4.81 39.87 1.89
2529 4147 7.538303 ACAAAGCTTTTGTCAAAATTACCAG 57.462 32.000 9.53 0.12 0.00 4.00
2530 4148 7.327214 ACAAAGCTTTTGTCAAAATTACCAGA 58.673 30.769 9.53 0.00 0.00 3.86
2531 4149 7.821846 ACAAAGCTTTTGTCAAAATTACCAGAA 59.178 29.630 9.53 0.00 0.00 3.02
2534 4152 8.424274 AGCTTTTGTCAAAATTACCAGAAAAG 57.576 30.769 11.09 0.00 34.01 2.27
2542 4160 8.360390 GTCAAAATTACCAGAAAAGGTCAGAAT 58.640 33.333 0.00 0.00 42.06 2.40
2607 4227 3.560025 GGAGCATTTGAGTTCAGGAGGAA 60.560 47.826 0.00 0.00 0.00 3.36
2619 4254 4.982241 TCAGGAGGAACAGATTTTCACT 57.018 40.909 0.00 0.00 0.00 3.41
2661 4296 4.038162 AGAAGATTGATACGGCCAGTACTC 59.962 45.833 2.24 6.84 38.29 2.59
2716 4638 2.303022 CTCCGGGTACATGGAATAGCAT 59.697 50.000 0.00 0.00 34.06 3.79
2757 4679 1.679680 CGTCTCCTCCCGCTTAACATA 59.320 52.381 0.00 0.00 0.00 2.29
2758 4680 2.543238 CGTCTCCTCCCGCTTAACATAC 60.543 54.545 0.00 0.00 0.00 2.39
2759 4681 1.679680 TCTCCTCCCGCTTAACATACG 59.320 52.381 0.00 0.00 0.00 3.06
2760 4682 0.103572 TCCTCCCGCTTAACATACGC 59.896 55.000 0.00 0.00 0.00 4.42
2761 4683 0.878961 CCTCCCGCTTAACATACGCC 60.879 60.000 0.00 0.00 0.00 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.844257 AGATTCTTTTGATTTCCTCGATTAGAT 57.156 29.630 0.00 0.00 0.00 1.98
3 4 9.319143 GAGATTCTTTTGATTTCCTCGATTAGA 57.681 33.333 0.00 0.00 0.00 2.10
4 5 9.323985 AGAGATTCTTTTGATTTCCTCGATTAG 57.676 33.333 0.00 0.00 0.00 1.73
5 6 9.672673 AAGAGATTCTTTTGATTTCCTCGATTA 57.327 29.630 0.00 0.00 31.57 1.75
6 7 8.572855 AAGAGATTCTTTTGATTTCCTCGATT 57.427 30.769 0.00 0.00 31.57 3.34
7 8 7.010923 CGAAGAGATTCTTTTGATTTCCTCGAT 59.989 37.037 0.00 0.00 36.73 3.59
8 9 6.311445 CGAAGAGATTCTTTTGATTTCCTCGA 59.689 38.462 0.00 0.00 36.73 4.04
9 10 6.456181 CCGAAGAGATTCTTTTGATTTCCTCG 60.456 42.308 0.00 0.00 36.73 4.63
10 11 6.676700 GCCGAAGAGATTCTTTTGATTTCCTC 60.677 42.308 0.00 0.00 36.73 3.71
11 12 5.124617 GCCGAAGAGATTCTTTTGATTTCCT 59.875 40.000 0.00 0.00 36.73 3.36
12 13 5.335935 GCCGAAGAGATTCTTTTGATTTCC 58.664 41.667 0.00 0.00 36.73 3.13
13 14 5.124617 AGGCCGAAGAGATTCTTTTGATTTC 59.875 40.000 0.00 0.00 36.73 2.17
14 15 5.012893 AGGCCGAAGAGATTCTTTTGATTT 58.987 37.500 0.00 0.00 36.73 2.17
15 16 4.593956 AGGCCGAAGAGATTCTTTTGATT 58.406 39.130 0.00 0.00 36.73 2.57
16 17 4.227864 AGGCCGAAGAGATTCTTTTGAT 57.772 40.909 0.00 0.00 36.73 2.57
17 18 3.703001 AGGCCGAAGAGATTCTTTTGA 57.297 42.857 0.00 0.00 36.73 2.69
18 19 4.006319 AGAAGGCCGAAGAGATTCTTTTG 58.994 43.478 0.00 0.00 36.73 2.44
19 20 4.257731 GAGAAGGCCGAAGAGATTCTTTT 58.742 43.478 0.00 0.00 36.73 2.27
20 21 3.369997 GGAGAAGGCCGAAGAGATTCTTT 60.370 47.826 0.00 0.00 36.73 2.52
21 22 2.169561 GGAGAAGGCCGAAGAGATTCTT 59.830 50.000 0.00 0.00 39.87 2.52
22 23 1.760029 GGAGAAGGCCGAAGAGATTCT 59.240 52.381 0.00 0.00 33.07 2.40
23 24 1.482593 TGGAGAAGGCCGAAGAGATTC 59.517 52.381 0.00 0.00 0.00 2.52
24 25 1.484240 CTGGAGAAGGCCGAAGAGATT 59.516 52.381 0.00 0.00 0.00 2.40
25 26 1.118838 CTGGAGAAGGCCGAAGAGAT 58.881 55.000 0.00 0.00 0.00 2.75
26 27 1.608717 GCTGGAGAAGGCCGAAGAGA 61.609 60.000 0.00 0.00 0.00 3.10
27 28 1.153469 GCTGGAGAAGGCCGAAGAG 60.153 63.158 0.00 0.00 0.00 2.85
28 29 1.194781 AAGCTGGAGAAGGCCGAAGA 61.195 55.000 0.00 0.00 0.00 2.87
29 30 1.023513 CAAGCTGGAGAAGGCCGAAG 61.024 60.000 0.00 0.00 0.00 3.79
30 31 1.003355 CAAGCTGGAGAAGGCCGAA 60.003 57.895 0.00 0.00 0.00 4.30
31 32 2.665000 CAAGCTGGAGAAGGCCGA 59.335 61.111 0.00 0.00 0.00 5.54
32 33 2.437359 CCAAGCTGGAGAAGGCCG 60.437 66.667 0.00 0.00 40.96 6.13
33 34 3.081554 TCCAAGCTGGAGAAGGCC 58.918 61.111 0.00 0.00 42.67 5.19
40 41 4.353777 ACTATAGAACACTCCAAGCTGGA 58.646 43.478 6.78 0.00 45.98 3.86
41 42 4.744795 ACTATAGAACACTCCAAGCTGG 57.255 45.455 6.78 0.00 39.43 4.85
42 43 5.274718 CGTACTATAGAACACTCCAAGCTG 58.725 45.833 6.78 0.00 0.00 4.24
43 44 4.338682 CCGTACTATAGAACACTCCAAGCT 59.661 45.833 6.78 0.00 0.00 3.74
44 45 4.337555 TCCGTACTATAGAACACTCCAAGC 59.662 45.833 6.78 0.00 0.00 4.01
45 46 5.505985 GCTCCGTACTATAGAACACTCCAAG 60.506 48.000 6.78 0.00 0.00 3.61
46 47 4.337555 GCTCCGTACTATAGAACACTCCAA 59.662 45.833 6.78 0.00 0.00 3.53
47 48 3.881688 GCTCCGTACTATAGAACACTCCA 59.118 47.826 6.78 0.00 0.00 3.86
48 49 3.881688 TGCTCCGTACTATAGAACACTCC 59.118 47.826 6.78 0.00 0.00 3.85
49 50 4.815308 TCTGCTCCGTACTATAGAACACTC 59.185 45.833 6.78 0.00 0.00 3.51
50 51 4.778579 TCTGCTCCGTACTATAGAACACT 58.221 43.478 6.78 0.00 0.00 3.55
51 52 5.496133 TTCTGCTCCGTACTATAGAACAC 57.504 43.478 6.78 0.61 0.00 3.32
52 53 5.416639 TGTTTCTGCTCCGTACTATAGAACA 59.583 40.000 6.78 0.00 0.00 3.18
53 54 5.888105 TGTTTCTGCTCCGTACTATAGAAC 58.112 41.667 6.78 0.00 0.00 3.01
54 55 5.067413 CCTGTTTCTGCTCCGTACTATAGAA 59.933 44.000 6.78 0.00 0.00 2.10
55 56 4.579340 CCTGTTTCTGCTCCGTACTATAGA 59.421 45.833 6.78 0.00 0.00 1.98
56 57 4.338682 ACCTGTTTCTGCTCCGTACTATAG 59.661 45.833 0.00 0.00 0.00 1.31
57 58 4.275810 ACCTGTTTCTGCTCCGTACTATA 58.724 43.478 0.00 0.00 0.00 1.31
58 59 3.097614 ACCTGTTTCTGCTCCGTACTAT 58.902 45.455 0.00 0.00 0.00 2.12
59 60 2.522185 ACCTGTTTCTGCTCCGTACTA 58.478 47.619 0.00 0.00 0.00 1.82
60 61 1.339097 ACCTGTTTCTGCTCCGTACT 58.661 50.000 0.00 0.00 0.00 2.73
61 62 1.798813 CAACCTGTTTCTGCTCCGTAC 59.201 52.381 0.00 0.00 0.00 3.67
62 63 1.270625 CCAACCTGTTTCTGCTCCGTA 60.271 52.381 0.00 0.00 0.00 4.02
63 64 0.535102 CCAACCTGTTTCTGCTCCGT 60.535 55.000 0.00 0.00 0.00 4.69
64 65 1.856265 GCCAACCTGTTTCTGCTCCG 61.856 60.000 0.00 0.00 0.00 4.63
65 66 0.823356 TGCCAACCTGTTTCTGCTCC 60.823 55.000 0.00 0.00 0.00 4.70
66 67 0.312102 GTGCCAACCTGTTTCTGCTC 59.688 55.000 0.00 0.00 0.00 4.26
67 68 0.395586 TGTGCCAACCTGTTTCTGCT 60.396 50.000 0.00 0.00 0.00 4.24
68 69 0.675633 ATGTGCCAACCTGTTTCTGC 59.324 50.000 0.00 0.00 0.00 4.26
69 70 1.955778 TCATGTGCCAACCTGTTTCTG 59.044 47.619 0.00 0.00 0.00 3.02
70 71 2.233271 CTCATGTGCCAACCTGTTTCT 58.767 47.619 0.00 0.00 0.00 2.52
71 72 1.956477 ACTCATGTGCCAACCTGTTTC 59.044 47.619 0.00 0.00 0.00 2.78
72 73 1.682854 CACTCATGTGCCAACCTGTTT 59.317 47.619 0.00 0.00 37.38 2.83
73 74 1.321474 CACTCATGTGCCAACCTGTT 58.679 50.000 0.00 0.00 37.38 3.16
74 75 3.025924 CACTCATGTGCCAACCTGT 57.974 52.632 0.00 0.00 37.38 4.00
84 85 1.962822 CACCGCTGCACACTCATGT 60.963 57.895 0.00 0.00 40.80 3.21
85 86 2.683859 CCACCGCTGCACACTCATG 61.684 63.158 0.00 0.00 0.00 3.07
86 87 2.359107 CCACCGCTGCACACTCAT 60.359 61.111 0.00 0.00 0.00 2.90
110 111 1.641677 GTCATGTAATCGCCGGTGC 59.358 57.895 11.05 0.00 0.00 5.01
111 112 0.526739 TCGTCATGTAATCGCCGGTG 60.527 55.000 9.28 9.28 0.00 4.94
112 113 0.387929 ATCGTCATGTAATCGCCGGT 59.612 50.000 1.90 0.00 0.00 5.28
113 114 1.192312 CAATCGTCATGTAATCGCCGG 59.808 52.381 0.00 0.00 0.00 6.13
114 115 1.397190 GCAATCGTCATGTAATCGCCG 60.397 52.381 0.00 0.00 0.00 6.46
115 116 1.867233 AGCAATCGTCATGTAATCGCC 59.133 47.619 0.00 0.00 0.00 5.54
116 117 2.348872 CCAGCAATCGTCATGTAATCGC 60.349 50.000 0.00 0.00 0.00 4.58
117 118 3.123050 TCCAGCAATCGTCATGTAATCG 58.877 45.455 0.00 0.00 0.00 3.34
118 119 3.059325 GCTCCAGCAATCGTCATGTAATC 60.059 47.826 0.00 0.00 41.59 1.75
119 120 2.874701 GCTCCAGCAATCGTCATGTAAT 59.125 45.455 0.00 0.00 41.59 1.89
120 121 2.279741 GCTCCAGCAATCGTCATGTAA 58.720 47.619 0.00 0.00 41.59 2.41
121 122 1.473257 GGCTCCAGCAATCGTCATGTA 60.473 52.381 0.03 0.00 44.36 2.29
122 123 0.745845 GGCTCCAGCAATCGTCATGT 60.746 55.000 0.03 0.00 44.36 3.21
123 124 1.442526 GGGCTCCAGCAATCGTCATG 61.443 60.000 0.03 0.00 44.36 3.07
124 125 1.153086 GGGCTCCAGCAATCGTCAT 60.153 57.895 0.03 0.00 44.36 3.06
125 126 2.268920 GGGCTCCAGCAATCGTCA 59.731 61.111 0.03 0.00 44.36 4.35
126 127 2.514824 GGGGCTCCAGCAATCGTC 60.515 66.667 0.00 0.00 44.36 4.20
127 128 3.011517 AGGGGCTCCAGCAATCGT 61.012 61.111 4.79 0.00 44.36 3.73
128 129 2.515523 CAGGGGCTCCAGCAATCG 60.516 66.667 4.79 0.00 44.36 3.34
129 130 1.153005 CTCAGGGGCTCCAGCAATC 60.153 63.158 4.79 0.00 44.36 2.67
130 131 1.927527 ACTCAGGGGCTCCAGCAAT 60.928 57.895 4.79 0.00 44.36 3.56
131 132 2.530151 ACTCAGGGGCTCCAGCAA 60.530 61.111 4.79 0.00 44.36 3.91
132 133 3.324930 CACTCAGGGGCTCCAGCA 61.325 66.667 4.79 0.00 44.36 4.41
133 134 4.792804 GCACTCAGGGGCTCCAGC 62.793 72.222 4.79 0.00 41.14 4.85
134 135 3.324930 TGCACTCAGGGGCTCCAG 61.325 66.667 4.79 0.00 34.83 3.86
135 136 3.640407 GTGCACTCAGGGGCTCCA 61.640 66.667 10.32 0.00 34.83 3.86
136 137 4.416738 GGTGCACTCAGGGGCTCC 62.417 72.222 17.98 0.00 36.63 4.70
137 138 3.618780 CTGGTGCACTCAGGGGCTC 62.619 68.421 17.98 0.00 0.00 4.70
138 139 3.644606 CTGGTGCACTCAGGGGCT 61.645 66.667 17.98 0.00 0.00 5.19
139 140 4.729918 CCTGGTGCACTCAGGGGC 62.730 72.222 31.35 11.91 45.95 5.80
149 150 1.174712 ACACACAATCTGCCTGGTGC 61.175 55.000 0.00 0.00 41.77 5.01
150 151 0.594602 CACACACAATCTGCCTGGTG 59.405 55.000 0.00 0.00 37.29 4.17
151 152 0.473755 TCACACACAATCTGCCTGGT 59.526 50.000 0.00 0.00 0.00 4.00
152 153 1.471287 CATCACACACAATCTGCCTGG 59.529 52.381 0.00 0.00 0.00 4.45
153 154 2.429478 TCATCACACACAATCTGCCTG 58.571 47.619 0.00 0.00 0.00 4.85
154 155 2.865119 TCATCACACACAATCTGCCT 57.135 45.000 0.00 0.00 0.00 4.75
155 156 3.192001 ACATTCATCACACACAATCTGCC 59.808 43.478 0.00 0.00 0.00 4.85
156 157 4.430137 ACATTCATCACACACAATCTGC 57.570 40.909 0.00 0.00 0.00 4.26
157 158 8.124823 GGTATTACATTCATCACACACAATCTG 58.875 37.037 0.00 0.00 0.00 2.90
158 159 7.828717 TGGTATTACATTCATCACACACAATCT 59.171 33.333 0.00 0.00 0.00 2.40
159 160 7.910162 GTGGTATTACATTCATCACACACAATC 59.090 37.037 0.00 0.00 0.00 2.67
160 161 7.148086 GGTGGTATTACATTCATCACACACAAT 60.148 37.037 0.00 0.00 0.00 2.71
161 162 6.150307 GGTGGTATTACATTCATCACACACAA 59.850 38.462 0.00 0.00 0.00 3.33
162 163 5.645929 GGTGGTATTACATTCATCACACACA 59.354 40.000 0.00 0.00 0.00 3.72
163 164 5.645929 TGGTGGTATTACATTCATCACACAC 59.354 40.000 0.00 0.00 0.00 3.82
164 165 5.810095 TGGTGGTATTACATTCATCACACA 58.190 37.500 0.00 0.00 0.00 3.72
165 166 6.238731 CCATGGTGGTATTACATTCATCACAC 60.239 42.308 2.57 0.00 31.35 3.82
166 167 5.827267 CCATGGTGGTATTACATTCATCACA 59.173 40.000 2.57 0.00 31.35 3.58
167 168 5.278463 GCCATGGTGGTATTACATTCATCAC 60.278 44.000 14.67 0.00 40.46 3.06
168 169 4.826733 GCCATGGTGGTATTACATTCATCA 59.173 41.667 14.67 0.00 40.46 3.07
169 170 4.826733 TGCCATGGTGGTATTACATTCATC 59.173 41.667 14.67 0.00 40.46 2.92
170 171 4.802307 TGCCATGGTGGTATTACATTCAT 58.198 39.130 14.67 0.00 40.46 2.57
171 172 4.242336 TGCCATGGTGGTATTACATTCA 57.758 40.909 14.67 0.00 40.46 2.57
172 173 6.490040 ACTTATGCCATGGTGGTATTACATTC 59.510 38.462 14.67 0.00 39.99 2.67
173 174 6.372931 ACTTATGCCATGGTGGTATTACATT 58.627 36.000 14.67 0.00 39.99 2.71
174 175 5.952387 ACTTATGCCATGGTGGTATTACAT 58.048 37.500 14.67 7.96 39.99 2.29
175 176 5.381184 ACTTATGCCATGGTGGTATTACA 57.619 39.130 14.67 0.00 39.99 2.41
176 177 6.709018 AAACTTATGCCATGGTGGTATTAC 57.291 37.500 14.67 0.00 39.99 1.89
177 178 6.892456 TCAAAACTTATGCCATGGTGGTATTA 59.108 34.615 14.67 0.00 39.99 0.98
178 179 5.719085 TCAAAACTTATGCCATGGTGGTATT 59.281 36.000 14.67 0.00 39.99 1.89
179 180 5.268387 TCAAAACTTATGCCATGGTGGTAT 58.732 37.500 14.67 5.94 45.06 2.73
180 181 4.667573 TCAAAACTTATGCCATGGTGGTA 58.332 39.130 14.67 1.12 40.46 3.25
181 182 3.505386 TCAAAACTTATGCCATGGTGGT 58.495 40.909 14.67 2.16 40.46 4.16
182 183 4.160065 TCATCAAAACTTATGCCATGGTGG 59.840 41.667 14.67 2.04 41.55 4.61
183 184 5.104374 GTCATCAAAACTTATGCCATGGTG 58.896 41.667 14.67 0.00 0.00 4.17
184 185 4.160252 GGTCATCAAAACTTATGCCATGGT 59.840 41.667 14.67 0.00 0.00 3.55
185 186 4.160065 TGGTCATCAAAACTTATGCCATGG 59.840 41.667 7.63 7.63 29.91 3.66
186 187 5.327616 TGGTCATCAAAACTTATGCCATG 57.672 39.130 0.00 0.00 29.91 3.66
187 188 5.163385 CCATGGTCATCAAAACTTATGCCAT 60.163 40.000 2.57 0.00 38.95 4.40
188 189 4.160065 CCATGGTCATCAAAACTTATGCCA 59.840 41.667 2.57 0.00 35.36 4.92
189 190 4.160252 ACCATGGTCATCAAAACTTATGCC 59.840 41.667 13.00 0.00 0.00 4.40
190 191 5.329035 ACCATGGTCATCAAAACTTATGC 57.671 39.130 13.00 0.00 0.00 3.14
191 192 7.094248 TGAGAACCATGGTCATCAAAACTTATG 60.094 37.037 23.09 0.00 0.00 1.90
192 193 6.947733 TGAGAACCATGGTCATCAAAACTTAT 59.052 34.615 23.09 3.36 0.00 1.73
193 194 6.303054 TGAGAACCATGGTCATCAAAACTTA 58.697 36.000 23.09 4.87 0.00 2.24
194 195 5.139727 TGAGAACCATGGTCATCAAAACTT 58.860 37.500 23.09 4.04 0.00 2.66
195 196 4.728772 TGAGAACCATGGTCATCAAAACT 58.271 39.130 23.09 11.52 0.00 2.66
196 197 5.452078 TTGAGAACCATGGTCATCAAAAC 57.548 39.130 29.11 14.68 32.95 2.43
197 198 6.477053 TTTTGAGAACCATGGTCATCAAAA 57.523 33.333 36.93 36.93 42.85 2.44
198 199 6.477053 TTTTTGAGAACCATGGTCATCAAA 57.523 33.333 33.05 33.05 38.99 2.69
223 224 2.879646 TCCAACGCGGACTTACATTTTT 59.120 40.909 12.47 0.00 39.64 1.94
224 225 2.496111 TCCAACGCGGACTTACATTTT 58.504 42.857 12.47 0.00 39.64 1.82
225 226 2.172851 TCCAACGCGGACTTACATTT 57.827 45.000 12.47 0.00 39.64 2.32
226 227 3.919163 TCCAACGCGGACTTACATT 57.081 47.368 12.47 0.00 39.64 2.71
235 236 2.126502 GCAAACCATCCAACGCGG 60.127 61.111 12.47 0.00 0.00 6.46
236 237 2.501650 CGCAAACCATCCAACGCG 60.502 61.111 3.53 3.53 36.47 6.01
237 238 2.126502 CCGCAAACCATCCAACGC 60.127 61.111 0.00 0.00 0.00 4.84
238 239 2.566010 CCCGCAAACCATCCAACG 59.434 61.111 0.00 0.00 0.00 4.10
239 240 1.605165 TCCCCGCAAACCATCCAAC 60.605 57.895 0.00 0.00 0.00 3.77
240 241 1.605165 GTCCCCGCAAACCATCCAA 60.605 57.895 0.00 0.00 0.00 3.53
241 242 2.034999 GTCCCCGCAAACCATCCA 59.965 61.111 0.00 0.00 0.00 3.41
242 243 2.046285 CAGTCCCCGCAAACCATCC 61.046 63.158 0.00 0.00 0.00 3.51
243 244 0.608035 TTCAGTCCCCGCAAACCATC 60.608 55.000 0.00 0.00 0.00 3.51
244 245 0.893727 GTTCAGTCCCCGCAAACCAT 60.894 55.000 0.00 0.00 0.00 3.55
245 246 1.527380 GTTCAGTCCCCGCAAACCA 60.527 57.895 0.00 0.00 0.00 3.67
246 247 0.035739 TAGTTCAGTCCCCGCAAACC 59.964 55.000 0.00 0.00 0.00 3.27
247 248 2.109425 ATAGTTCAGTCCCCGCAAAC 57.891 50.000 0.00 0.00 0.00 2.93
248 249 2.568062 TGTATAGTTCAGTCCCCGCAAA 59.432 45.455 0.00 0.00 0.00 3.68
249 250 2.167693 CTGTATAGTTCAGTCCCCGCAA 59.832 50.000 0.00 0.00 0.00 4.85
250 251 1.754803 CTGTATAGTTCAGTCCCCGCA 59.245 52.381 0.00 0.00 0.00 5.69
251 252 1.755380 ACTGTATAGTTCAGTCCCCGC 59.245 52.381 0.00 0.00 41.52 6.13
252 253 2.481449 GCACTGTATAGTTCAGTCCCCG 60.481 54.545 0.00 0.00 43.14 5.73
253 254 2.481449 CGCACTGTATAGTTCAGTCCCC 60.481 54.545 0.00 0.00 43.14 4.81
254 255 2.426024 TCGCACTGTATAGTTCAGTCCC 59.574 50.000 0.00 0.00 43.14 4.46
255 256 3.777465 TCGCACTGTATAGTTCAGTCC 57.223 47.619 0.00 0.00 43.14 3.85
256 257 4.504461 CCATTCGCACTGTATAGTTCAGTC 59.496 45.833 0.00 0.00 43.14 3.51
257 258 4.159693 TCCATTCGCACTGTATAGTTCAGT 59.840 41.667 0.00 0.00 45.43 3.41
258 259 4.682787 TCCATTCGCACTGTATAGTTCAG 58.317 43.478 0.00 0.00 34.07 3.02
259 260 4.729227 TCCATTCGCACTGTATAGTTCA 57.271 40.909 0.00 0.00 34.07 3.18
260 261 4.084328 GCATCCATTCGCACTGTATAGTTC 60.084 45.833 0.00 0.00 34.07 3.01
261 262 3.809832 GCATCCATTCGCACTGTATAGTT 59.190 43.478 0.00 0.00 34.07 2.24
262 263 3.393800 GCATCCATTCGCACTGTATAGT 58.606 45.455 0.00 0.00 37.75 2.12
263 264 2.409715 CGCATCCATTCGCACTGTATAG 59.590 50.000 0.00 0.00 0.00 1.31
264 265 2.403259 CGCATCCATTCGCACTGTATA 58.597 47.619 0.00 0.00 0.00 1.47
265 266 1.220529 CGCATCCATTCGCACTGTAT 58.779 50.000 0.00 0.00 0.00 2.29
266 267 0.809636 CCGCATCCATTCGCACTGTA 60.810 55.000 0.00 0.00 0.00 2.74
267 268 2.108514 CCGCATCCATTCGCACTGT 61.109 57.895 0.00 0.00 0.00 3.55
268 269 2.711311 CCGCATCCATTCGCACTG 59.289 61.111 0.00 0.00 0.00 3.66
269 270 2.514592 CCCGCATCCATTCGCACT 60.515 61.111 0.00 0.00 0.00 4.40
270 271 3.585990 CCCCGCATCCATTCGCAC 61.586 66.667 0.00 0.00 0.00 5.34
271 272 4.873810 CCCCCGCATCCATTCGCA 62.874 66.667 0.00 0.00 0.00 5.10
272 273 4.875713 ACCCCCGCATCCATTCGC 62.876 66.667 0.00 0.00 0.00 4.70
273 274 2.591715 GACCCCCGCATCCATTCG 60.592 66.667 0.00 0.00 0.00 3.34
274 275 1.526917 CAGACCCCCGCATCCATTC 60.527 63.158 0.00 0.00 0.00 2.67
275 276 1.355718 ATCAGACCCCCGCATCCATT 61.356 55.000 0.00 0.00 0.00 3.16
276 277 1.771746 ATCAGACCCCCGCATCCAT 60.772 57.895 0.00 0.00 0.00 3.41
277 278 2.366837 ATCAGACCCCCGCATCCA 60.367 61.111 0.00 0.00 0.00 3.41
278 279 1.772819 ATCATCAGACCCCCGCATCC 61.773 60.000 0.00 0.00 0.00 3.51
279 280 0.321122 GATCATCAGACCCCCGCATC 60.321 60.000 0.00 0.00 0.00 3.91
280 281 1.757306 GATCATCAGACCCCCGCAT 59.243 57.895 0.00 0.00 0.00 4.73
281 282 2.443394 GGATCATCAGACCCCCGCA 61.443 63.158 0.00 0.00 0.00 5.69
282 283 2.427753 GGATCATCAGACCCCCGC 59.572 66.667 0.00 0.00 0.00 6.13
283 284 2.737180 CGGATCATCAGACCCCCG 59.263 66.667 0.00 0.00 0.00 5.73
284 285 2.427753 GCGGATCATCAGACCCCC 59.572 66.667 0.00 0.00 0.00 5.40
285 286 2.029666 CGCGGATCATCAGACCCC 59.970 66.667 0.00 0.00 0.00 4.95
286 287 2.663188 GCGCGGATCATCAGACCC 60.663 66.667 8.83 0.00 0.00 4.46
287 288 1.953138 CAGCGCGGATCATCAGACC 60.953 63.158 8.83 0.00 0.00 3.85
288 289 1.953138 CCAGCGCGGATCATCAGAC 60.953 63.158 9.80 0.00 36.56 3.51
289 290 2.080222 CTCCAGCGCGGATCATCAGA 62.080 60.000 18.80 1.39 45.19 3.27
290 291 1.664017 CTCCAGCGCGGATCATCAG 60.664 63.158 18.80 5.31 45.19 2.90
291 292 2.080222 CTCTCCAGCGCGGATCATCA 62.080 60.000 18.80 0.00 45.19 3.07
292 293 1.372748 CTCTCCAGCGCGGATCATC 60.373 63.158 18.80 0.00 45.19 2.92
293 294 2.130426 ACTCTCCAGCGCGGATCAT 61.130 57.895 18.80 6.88 45.19 2.45
294 295 2.755876 ACTCTCCAGCGCGGATCA 60.756 61.111 18.80 9.67 45.19 2.92
295 296 2.279120 CACTCTCCAGCGCGGATC 60.279 66.667 18.80 0.00 45.19 3.36
296 297 3.842923 CCACTCTCCAGCGCGGAT 61.843 66.667 18.80 4.60 45.19 4.18
298 299 4.504916 CTCCACTCTCCAGCGCGG 62.505 72.222 8.83 11.37 0.00 6.46
299 300 2.780094 ATCTCCACTCTCCAGCGCG 61.780 63.158 0.00 0.00 0.00 6.86
300 301 1.227205 CATCTCCACTCTCCAGCGC 60.227 63.158 0.00 0.00 0.00 5.92
301 302 1.227205 GCATCTCCACTCTCCAGCG 60.227 63.158 0.00 0.00 0.00 5.18
302 303 0.251354 TTGCATCTCCACTCTCCAGC 59.749 55.000 0.00 0.00 0.00 4.85
303 304 2.169978 TGATTGCATCTCCACTCTCCAG 59.830 50.000 0.00 0.00 0.00 3.86
304 305 2.190538 TGATTGCATCTCCACTCTCCA 58.809 47.619 0.00 0.00 0.00 3.86
305 306 2.996249 TGATTGCATCTCCACTCTCC 57.004 50.000 0.00 0.00 0.00 3.71
306 307 5.851720 TCTTATGATTGCATCTCCACTCTC 58.148 41.667 0.00 0.00 35.94 3.20
307 308 5.883685 TCTTATGATTGCATCTCCACTCT 57.116 39.130 0.00 0.00 35.94 3.24
308 309 5.411977 CCATCTTATGATTGCATCTCCACTC 59.588 44.000 0.00 0.00 35.94 3.51
309 310 5.314529 CCATCTTATGATTGCATCTCCACT 58.685 41.667 0.00 0.00 35.94 4.00
310 311 4.082895 GCCATCTTATGATTGCATCTCCAC 60.083 45.833 9.13 0.00 40.03 4.02
311 312 4.077108 GCCATCTTATGATTGCATCTCCA 58.923 43.478 9.13 0.00 40.03 3.86
312 313 3.126514 CGCCATCTTATGATTGCATCTCC 59.873 47.826 13.11 0.00 40.21 3.71
313 314 3.750130 ACGCCATCTTATGATTGCATCTC 59.250 43.478 13.11 0.00 40.21 2.75
314 315 3.501062 CACGCCATCTTATGATTGCATCT 59.499 43.478 13.11 0.00 40.21 2.90
315 316 3.251729 ACACGCCATCTTATGATTGCATC 59.748 43.478 13.11 0.00 40.21 3.91
316 317 3.004002 CACACGCCATCTTATGATTGCAT 59.996 43.478 13.11 0.00 40.21 3.96
317 318 2.355444 CACACGCCATCTTATGATTGCA 59.645 45.455 13.11 0.00 40.21 4.08
318 319 2.855953 GCACACGCCATCTTATGATTGC 60.856 50.000 4.97 4.97 37.81 3.56
319 320 2.600556 CGCACACGCCATCTTATGATTG 60.601 50.000 0.00 0.00 33.11 2.67
320 321 1.599071 CGCACACGCCATCTTATGATT 59.401 47.619 0.00 0.00 33.11 2.57
321 322 1.220529 CGCACACGCCATCTTATGAT 58.779 50.000 0.00 0.00 33.11 2.45
322 323 0.108377 ACGCACACGCCATCTTATGA 60.108 50.000 0.00 0.00 45.53 2.15
323 324 0.301687 GACGCACACGCCATCTTATG 59.698 55.000 0.00 0.00 45.53 1.90
324 325 0.810031 GGACGCACACGCCATCTTAT 60.810 55.000 0.00 0.00 45.53 1.73
325 326 1.447140 GGACGCACACGCCATCTTA 60.447 57.895 0.00 0.00 45.53 2.10
326 327 2.742372 GGACGCACACGCCATCTT 60.742 61.111 0.00 0.00 45.53 2.40
329 330 3.950794 ATTCGGACGCACACGCCAT 62.951 57.895 0.00 0.00 45.53 4.40
330 331 4.673298 ATTCGGACGCACACGCCA 62.673 61.111 0.00 0.00 45.53 5.69
331 332 2.877360 TAGATTCGGACGCACACGCC 62.877 60.000 0.00 0.00 45.53 5.68
332 333 1.515519 TAGATTCGGACGCACACGC 60.516 57.895 0.00 0.00 45.53 5.34
334 335 2.541178 CCTAGTAGATTCGGACGCACAC 60.541 54.545 0.00 0.00 0.00 3.82
335 336 1.674441 CCTAGTAGATTCGGACGCACA 59.326 52.381 0.00 0.00 0.00 4.57
336 337 1.001597 CCCTAGTAGATTCGGACGCAC 60.002 57.143 0.00 0.00 0.00 5.34
337 338 1.315690 CCCTAGTAGATTCGGACGCA 58.684 55.000 0.00 0.00 0.00 5.24
374 375 4.496670 GTCGTCACGAGGGGATTG 57.503 61.111 0.00 0.00 36.23 2.67
744 2237 3.286751 TTGACTTGCGGTGCAGCC 61.287 61.111 10.90 3.83 40.61 4.85
901 2394 1.239347 AAAGAGAAGCCTTTGCCGTC 58.761 50.000 0.00 0.00 38.69 4.79
907 2400 6.110033 GCTAGCTAACTAAAGAGAAGCCTTT 58.890 40.000 7.70 0.00 39.46 3.11
945 2438 5.118990 AGCACGCAAGAACAGTATATGAAT 58.881 37.500 0.00 0.00 43.62 2.57
968 2461 0.979665 AGCTAGCCAAGAAGTGCAGA 59.020 50.000 12.13 0.00 0.00 4.26
1210 2781 1.448540 GCAGGATGACGGTCACCAG 60.449 63.158 22.80 18.30 39.69 4.00
1222 2793 3.532155 GAGGACGGCGAGCAGGAT 61.532 66.667 16.62 0.00 0.00 3.24
1383 2954 2.676471 ATGCGGCTGTTGGGGTTC 60.676 61.111 0.00 0.00 0.00 3.62
1774 3345 5.587043 ACACTACACCATGAACGAAAAGAAA 59.413 36.000 0.00 0.00 0.00 2.52
1783 3356 7.305474 CCAAAGAATTACACTACACCATGAAC 58.695 38.462 0.00 0.00 0.00 3.18
1932 3505 2.371306 TGTACATGCACGGAGCTACTA 58.629 47.619 0.00 0.00 45.94 1.82
2073 3649 6.086222 CCAGTTAACGATTTCCTCAACAATG 58.914 40.000 0.00 0.00 0.00 2.82
2074 3650 5.768164 ACCAGTTAACGATTTCCTCAACAAT 59.232 36.000 0.00 0.00 0.00 2.71
2076 3652 4.710324 ACCAGTTAACGATTTCCTCAACA 58.290 39.130 0.00 0.00 0.00 3.33
2077 3653 5.163884 GCTACCAGTTAACGATTTCCTCAAC 60.164 44.000 0.00 0.00 0.00 3.18
2078 3654 4.933400 GCTACCAGTTAACGATTTCCTCAA 59.067 41.667 0.00 0.00 0.00 3.02
2079 3655 4.222145 AGCTACCAGTTAACGATTTCCTCA 59.778 41.667 0.00 0.00 0.00 3.86
2080 3656 4.567159 CAGCTACCAGTTAACGATTTCCTC 59.433 45.833 0.00 0.00 0.00 3.71
2081 3657 4.504858 CAGCTACCAGTTAACGATTTCCT 58.495 43.478 0.00 0.00 0.00 3.36
2082 3658 3.063588 GCAGCTACCAGTTAACGATTTCC 59.936 47.826 0.00 0.00 0.00 3.13
2083 3659 3.933332 AGCAGCTACCAGTTAACGATTTC 59.067 43.478 0.00 0.00 0.00 2.17
2084 3660 3.933332 GAGCAGCTACCAGTTAACGATTT 59.067 43.478 0.00 0.00 0.00 2.17
2085 3661 3.522553 GAGCAGCTACCAGTTAACGATT 58.477 45.455 0.00 0.00 0.00 3.34
2086 3662 2.479730 CGAGCAGCTACCAGTTAACGAT 60.480 50.000 0.00 0.00 0.00 3.73
2087 3663 1.135489 CGAGCAGCTACCAGTTAACGA 60.135 52.381 0.00 0.00 0.00 3.85
2088 3664 1.269166 CGAGCAGCTACCAGTTAACG 58.731 55.000 0.00 0.00 0.00 3.18
2089 3665 1.067071 ACCGAGCAGCTACCAGTTAAC 60.067 52.381 0.00 0.00 0.00 2.01
2090 3666 1.263356 ACCGAGCAGCTACCAGTTAA 58.737 50.000 0.00 0.00 0.00 2.01
2091 3667 1.067142 CAACCGAGCAGCTACCAGTTA 60.067 52.381 0.00 0.00 0.00 2.24
2092 3668 0.320771 CAACCGAGCAGCTACCAGTT 60.321 55.000 0.00 0.00 0.00 3.16
2093 3669 1.293498 CAACCGAGCAGCTACCAGT 59.707 57.895 0.00 0.00 0.00 4.00
2094 3670 1.448540 CCAACCGAGCAGCTACCAG 60.449 63.158 0.00 0.00 0.00 4.00
2095 3671 2.662596 CCAACCGAGCAGCTACCA 59.337 61.111 0.00 0.00 0.00 3.25
2096 3672 2.820037 GCCAACCGAGCAGCTACC 60.820 66.667 0.00 0.00 0.00 3.18
2097 3673 2.103042 CAGCCAACCGAGCAGCTAC 61.103 63.158 0.00 0.00 33.33 3.58
2098 3674 2.265739 CAGCCAACCGAGCAGCTA 59.734 61.111 0.00 0.00 33.33 3.32
2099 3675 4.711949 CCAGCCAACCGAGCAGCT 62.712 66.667 0.00 0.00 35.52 4.24
2101 3677 3.052082 CACCAGCCAACCGAGCAG 61.052 66.667 0.00 0.00 0.00 4.24
2102 3678 3.535629 CTCACCAGCCAACCGAGCA 62.536 63.158 0.00 0.00 0.00 4.26
2103 3679 2.167398 TACTCACCAGCCAACCGAGC 62.167 60.000 0.00 0.00 0.00 5.03
2104 3680 0.108615 CTACTCACCAGCCAACCGAG 60.109 60.000 0.00 0.00 0.00 4.63
2105 3681 1.541310 CCTACTCACCAGCCAACCGA 61.541 60.000 0.00 0.00 0.00 4.69
2106 3682 1.079127 CCTACTCACCAGCCAACCG 60.079 63.158 0.00 0.00 0.00 4.44
2107 3683 1.299976 CCCTACTCACCAGCCAACC 59.700 63.158 0.00 0.00 0.00 3.77
2108 3684 1.198759 TCCCCTACTCACCAGCCAAC 61.199 60.000 0.00 0.00 0.00 3.77
2109 3685 0.253160 ATCCCCTACTCACCAGCCAA 60.253 55.000 0.00 0.00 0.00 4.52
2110 3686 0.253160 AATCCCCTACTCACCAGCCA 60.253 55.000 0.00 0.00 0.00 4.75
2111 3687 1.802553 TAATCCCCTACTCACCAGCC 58.197 55.000 0.00 0.00 0.00 4.85
2112 3688 3.555168 CGATTAATCCCCTACTCACCAGC 60.555 52.174 9.87 0.00 0.00 4.85
2113 3689 3.895656 TCGATTAATCCCCTACTCACCAG 59.104 47.826 9.87 0.00 0.00 4.00
2114 3690 3.640029 GTCGATTAATCCCCTACTCACCA 59.360 47.826 9.87 0.00 0.00 4.17
2115 3691 3.896272 AGTCGATTAATCCCCTACTCACC 59.104 47.826 9.87 0.00 0.00 4.02
2116 3692 6.645790 TTAGTCGATTAATCCCCTACTCAC 57.354 41.667 9.87 0.00 0.00 3.51
2117 3693 7.463961 GATTAGTCGATTAATCCCCTACTCA 57.536 40.000 23.22 1.67 35.12 3.41
2134 3710 3.059800 GCCGATTAACTTGCCGATTAGTC 60.060 47.826 0.00 0.00 0.00 2.59
2135 3711 2.870411 GCCGATTAACTTGCCGATTAGT 59.130 45.455 0.00 0.00 0.00 2.24
2136 3712 2.223377 GGCCGATTAACTTGCCGATTAG 59.777 50.000 0.00 0.00 33.59 1.73
2137 3713 2.215196 GGCCGATTAACTTGCCGATTA 58.785 47.619 0.00 0.00 33.59 1.75
2138 3714 1.021968 GGCCGATTAACTTGCCGATT 58.978 50.000 0.00 0.00 33.59 3.34
2139 3715 2.702847 GGCCGATTAACTTGCCGAT 58.297 52.632 0.00 0.00 33.59 4.18
2140 3716 4.211986 GGCCGATTAACTTGCCGA 57.788 55.556 0.00 0.00 33.59 5.54
2142 3718 2.959507 AAATGGCCGATTAACTTGCC 57.040 45.000 0.00 4.44 44.27 4.52
2143 3719 5.587289 TGATTAAATGGCCGATTAACTTGC 58.413 37.500 13.26 6.21 0.00 4.01
2144 3720 8.647143 AATTGATTAAATGGCCGATTAACTTG 57.353 30.769 13.26 0.00 0.00 3.16
2148 3724 9.619316 CGATTAATTGATTAAATGGCCGATTAA 57.381 29.630 13.33 13.33 36.02 1.40
2149 3725 9.004717 TCGATTAATTGATTAAATGGCCGATTA 57.995 29.630 0.88 0.00 36.02 1.75
2150 3726 7.881142 TCGATTAATTGATTAAATGGCCGATT 58.119 30.769 0.88 0.00 36.02 3.34
2151 3727 7.447374 TCGATTAATTGATTAAATGGCCGAT 57.553 32.000 0.88 0.00 36.02 4.18
2152 3728 6.869315 TCGATTAATTGATTAAATGGCCGA 57.131 33.333 0.88 0.00 36.02 5.54
2153 3729 7.807433 TCATTCGATTAATTGATTAAATGGCCG 59.193 33.333 6.22 0.00 36.02 6.13
2154 3730 9.643693 ATCATTCGATTAATTGATTAAATGGCC 57.356 29.630 6.22 0.00 36.02 5.36
2169 3745 9.929722 CCGATAAACTCAAAAATCATTCGATTA 57.070 29.630 0.00 0.00 41.12 1.75
2170 3746 7.432252 GCCGATAAACTCAAAAATCATTCGATT 59.568 33.333 0.00 0.00 43.94 3.34
2171 3747 6.912591 GCCGATAAACTCAAAAATCATTCGAT 59.087 34.615 0.00 0.00 0.00 3.59
2172 3748 6.093495 AGCCGATAAACTCAAAAATCATTCGA 59.907 34.615 0.00 0.00 0.00 3.71
2173 3749 6.258160 AGCCGATAAACTCAAAAATCATTCG 58.742 36.000 0.00 0.00 0.00 3.34
2174 3750 8.398665 AGTAGCCGATAAACTCAAAAATCATTC 58.601 33.333 0.00 0.00 0.00 2.67
2175 3751 8.281212 AGTAGCCGATAAACTCAAAAATCATT 57.719 30.769 0.00 0.00 0.00 2.57
2176 3752 7.254455 CGAGTAGCCGATAAACTCAAAAATCAT 60.254 37.037 0.00 0.00 39.69 2.45
2177 3753 6.035650 CGAGTAGCCGATAAACTCAAAAATCA 59.964 38.462 0.00 0.00 39.69 2.57
2178 3754 6.411652 CGAGTAGCCGATAAACTCAAAAATC 58.588 40.000 0.00 0.00 39.69 2.17
2179 3755 5.293569 CCGAGTAGCCGATAAACTCAAAAAT 59.706 40.000 0.00 0.00 39.69 1.82
2180 3756 4.628333 CCGAGTAGCCGATAAACTCAAAAA 59.372 41.667 0.00 0.00 39.69 1.94
2181 3757 4.178540 CCGAGTAGCCGATAAACTCAAAA 58.821 43.478 0.00 0.00 39.69 2.44
2182 3758 3.194116 ACCGAGTAGCCGATAAACTCAAA 59.806 43.478 0.00 0.00 39.69 2.69
2183 3759 2.756760 ACCGAGTAGCCGATAAACTCAA 59.243 45.455 0.00 0.00 39.69 3.02
2184 3760 2.098607 CACCGAGTAGCCGATAAACTCA 59.901 50.000 0.00 0.00 39.69 3.41
2185 3761 2.357009 TCACCGAGTAGCCGATAAACTC 59.643 50.000 0.00 0.00 36.99 3.01
2186 3762 2.098770 GTCACCGAGTAGCCGATAAACT 59.901 50.000 0.00 0.00 0.00 2.66
2187 3763 2.457970 GTCACCGAGTAGCCGATAAAC 58.542 52.381 0.00 0.00 0.00 2.01
2188 3764 1.406539 GGTCACCGAGTAGCCGATAAA 59.593 52.381 0.00 0.00 0.00 1.40
2189 3765 1.027357 GGTCACCGAGTAGCCGATAA 58.973 55.000 0.00 0.00 0.00 1.75
2190 3766 0.820891 GGGTCACCGAGTAGCCGATA 60.821 60.000 0.00 0.00 0.00 2.92
2191 3767 2.125961 GGGTCACCGAGTAGCCGAT 61.126 63.158 0.00 0.00 0.00 4.18
2192 3768 1.913951 TAGGGTCACCGAGTAGCCGA 61.914 60.000 0.00 0.00 43.47 5.54
2193 3769 1.452651 TAGGGTCACCGAGTAGCCG 60.453 63.158 0.00 0.00 43.47 5.52
2194 3770 1.722636 CGTAGGGTCACCGAGTAGCC 61.723 65.000 0.00 0.00 43.47 3.93
2195 3771 0.745845 TCGTAGGGTCACCGAGTAGC 60.746 60.000 0.00 0.00 43.47 3.58
2196 3772 1.297664 CTCGTAGGGTCACCGAGTAG 58.702 60.000 0.00 0.00 42.26 2.57
2197 3773 3.465990 CTCGTAGGGTCACCGAGTA 57.534 57.895 0.00 0.00 42.26 2.59
2198 3774 4.315588 CTCGTAGGGTCACCGAGT 57.684 61.111 0.00 0.00 42.26 4.18
2200 3776 0.107508 CCTACTCGTAGGGTCACCGA 60.108 60.000 14.08 0.00 46.96 4.69
2201 3777 2.401967 CCTACTCGTAGGGTCACCG 58.598 63.158 14.08 0.00 46.96 4.94
2209 3785 3.504906 TGCCGATTAATCCCTACTCGTAG 59.495 47.826 9.87 0.00 32.34 3.51
2210 3786 3.489355 TGCCGATTAATCCCTACTCGTA 58.511 45.455 9.87 0.00 32.34 3.43
2211 3787 2.313317 TGCCGATTAATCCCTACTCGT 58.687 47.619 9.87 0.00 32.34 4.18
2212 3788 3.243771 ACTTGCCGATTAATCCCTACTCG 60.244 47.826 9.87 0.00 33.64 4.18
2213 3789 4.338379 ACTTGCCGATTAATCCCTACTC 57.662 45.455 9.87 0.00 0.00 2.59
2214 3790 4.772886 AACTTGCCGATTAATCCCTACT 57.227 40.909 9.87 0.00 0.00 2.57
2215 3791 6.018180 CAGTTAACTTGCCGATTAATCCCTAC 60.018 42.308 5.07 0.00 0.00 3.18
2216 3792 6.053005 CAGTTAACTTGCCGATTAATCCCTA 58.947 40.000 5.07 0.00 0.00 3.53
2217 3793 4.881850 CAGTTAACTTGCCGATTAATCCCT 59.118 41.667 5.07 0.00 0.00 4.20
2218 3794 4.036380 CCAGTTAACTTGCCGATTAATCCC 59.964 45.833 5.07 2.26 0.00 3.85
2219 3795 4.638865 ACCAGTTAACTTGCCGATTAATCC 59.361 41.667 5.07 0.00 0.00 3.01
2220 3796 5.813080 ACCAGTTAACTTGCCGATTAATC 57.187 39.130 5.07 5.30 0.00 1.75
2221 3797 7.690952 TTAACCAGTTAACTTGCCGATTAAT 57.309 32.000 5.07 0.00 30.78 1.40
2222 3798 7.413219 CGATTAACCAGTTAACTTGCCGATTAA 60.413 37.037 5.07 4.36 37.80 1.40
2223 3799 6.036300 CGATTAACCAGTTAACTTGCCGATTA 59.964 38.462 5.07 0.00 37.80 1.75
2224 3800 5.163794 CGATTAACCAGTTAACTTGCCGATT 60.164 40.000 5.07 0.00 37.80 3.34
2225 3801 4.331717 CGATTAACCAGTTAACTTGCCGAT 59.668 41.667 5.07 0.00 37.80 4.18
2226 3802 3.680937 CGATTAACCAGTTAACTTGCCGA 59.319 43.478 5.07 0.00 37.80 5.54
2227 3803 3.181514 CCGATTAACCAGTTAACTTGCCG 60.182 47.826 5.07 3.31 37.80 5.69
2228 3804 4.004982 TCCGATTAACCAGTTAACTTGCC 58.995 43.478 5.07 0.00 37.80 4.52
2229 3805 5.353123 TCATCCGATTAACCAGTTAACTTGC 59.647 40.000 5.07 0.00 37.80 4.01
2230 3806 6.978343 TCATCCGATTAACCAGTTAACTTG 57.022 37.500 5.07 5.14 37.80 3.16
2231 3807 8.575649 AATTCATCCGATTAACCAGTTAACTT 57.424 30.769 5.07 0.00 37.80 2.66
2232 3808 8.047310 AGAATTCATCCGATTAACCAGTTAACT 58.953 33.333 8.44 1.12 37.80 2.24
2233 3809 8.209917 AGAATTCATCCGATTAACCAGTTAAC 57.790 34.615 8.44 0.00 37.80 2.01
2234 3810 8.673711 CAAGAATTCATCCGATTAACCAGTTAA 58.326 33.333 8.44 5.51 39.12 2.01
2235 3811 8.044309 TCAAGAATTCATCCGATTAACCAGTTA 58.956 33.333 8.44 0.00 0.00 2.24
2236 3812 6.884295 TCAAGAATTCATCCGATTAACCAGTT 59.116 34.615 8.44 0.00 0.00 3.16
2237 3813 6.414732 TCAAGAATTCATCCGATTAACCAGT 58.585 36.000 8.44 0.00 0.00 4.00
2238 3814 6.925610 TCAAGAATTCATCCGATTAACCAG 57.074 37.500 8.44 0.00 0.00 4.00
2239 3815 6.657117 TGTTCAAGAATTCATCCGATTAACCA 59.343 34.615 8.44 0.00 0.00 3.67
2240 3816 7.083875 TGTTCAAGAATTCATCCGATTAACC 57.916 36.000 8.44 0.00 0.00 2.85
2241 3817 7.189512 CCTGTTCAAGAATTCATCCGATTAAC 58.810 38.462 8.44 1.74 0.00 2.01
2242 3818 6.318648 CCCTGTTCAAGAATTCATCCGATTAA 59.681 38.462 8.44 0.00 0.00 1.40
2243 3819 5.822519 CCCTGTTCAAGAATTCATCCGATTA 59.177 40.000 8.44 0.00 0.00 1.75
2244 3820 4.641989 CCCTGTTCAAGAATTCATCCGATT 59.358 41.667 8.44 0.00 0.00 3.34
2245 3821 4.080356 TCCCTGTTCAAGAATTCATCCGAT 60.080 41.667 8.44 0.00 0.00 4.18
2246 3822 3.263170 TCCCTGTTCAAGAATTCATCCGA 59.737 43.478 8.44 0.00 0.00 4.55
2247 3823 3.609853 TCCCTGTTCAAGAATTCATCCG 58.390 45.455 8.44 0.00 0.00 4.18
2248 3824 7.645058 TTATTCCCTGTTCAAGAATTCATCC 57.355 36.000 8.44 0.00 32.64 3.51
2290 3866 9.483062 CGCACAAAAATTTTTAGAATTTGTTGA 57.517 25.926 15.55 0.00 40.98 3.18
2291 3867 9.483062 TCGCACAAAAATTTTTAGAATTTGTTG 57.517 25.926 15.55 3.47 40.98 3.33
2302 3884 7.691877 GTCAATGTTCTTCGCACAAAAATTTTT 59.308 29.630 10.41 10.41 0.00 1.94
2303 3885 7.148507 TGTCAATGTTCTTCGCACAAAAATTTT 60.149 29.630 0.00 0.00 0.00 1.82
2306 3888 5.347342 TGTCAATGTTCTTCGCACAAAAAT 58.653 33.333 0.00 0.00 0.00 1.82
2335 3917 7.485913 CGTGCTAAAATTTGTTCAGCATAGAAT 59.514 33.333 15.70 0.00 43.53 2.40
2339 3921 6.247727 TCGTGCTAAAATTTGTTCAGCATA 57.752 33.333 15.70 8.29 43.53 3.14
2340 3922 5.119931 TCGTGCTAAAATTTGTTCAGCAT 57.880 34.783 15.70 0.00 43.53 3.79
2341 3923 4.560136 TCGTGCTAAAATTTGTTCAGCA 57.440 36.364 11.04 11.04 39.79 4.41
2342 3924 5.607359 CGTTTCGTGCTAAAATTTGTTCAGC 60.607 40.000 0.00 0.00 0.00 4.26
2343 3925 5.108405 CCGTTTCGTGCTAAAATTTGTTCAG 60.108 40.000 0.00 0.00 0.00 3.02
2344 3926 4.735822 CCGTTTCGTGCTAAAATTTGTTCA 59.264 37.500 0.00 0.00 0.00 3.18
2345 3927 4.374607 GCCGTTTCGTGCTAAAATTTGTTC 60.375 41.667 0.00 0.00 0.00 3.18
2346 3928 3.487942 GCCGTTTCGTGCTAAAATTTGTT 59.512 39.130 0.00 0.00 0.00 2.83
2347 3929 3.047093 GCCGTTTCGTGCTAAAATTTGT 58.953 40.909 0.00 0.00 0.00 2.83
2348 3930 3.046390 TGCCGTTTCGTGCTAAAATTTG 58.954 40.909 0.00 0.00 0.00 2.32
2349 3931 3.357166 TGCCGTTTCGTGCTAAAATTT 57.643 38.095 0.00 0.00 0.00 1.82
2350 3932 3.569250 ATGCCGTTTCGTGCTAAAATT 57.431 38.095 0.00 0.00 0.00 1.82
2351 3933 3.498082 GAATGCCGTTTCGTGCTAAAAT 58.502 40.909 0.00 0.00 0.00 1.82
2352 3934 2.663334 CGAATGCCGTTTCGTGCTAAAA 60.663 45.455 5.63 0.00 42.63 1.52
2353 3935 1.136197 CGAATGCCGTTTCGTGCTAAA 60.136 47.619 5.63 0.00 42.63 1.85
2354 3936 0.440758 CGAATGCCGTTTCGTGCTAA 59.559 50.000 5.63 0.00 42.63 3.09
2355 3937 2.074942 CGAATGCCGTTTCGTGCTA 58.925 52.632 5.63 0.00 42.63 3.49
2365 3947 0.374758 CATGACTTCCACGAATGCCG 59.625 55.000 0.00 0.00 45.44 5.69
2367 3949 1.453155 ACCATGACTTCCACGAATGC 58.547 50.000 0.00 0.00 0.00 3.56
2393 3975 7.500141 ACATTTTAGAGTGCTGGTTTTGATTT 58.500 30.769 0.00 0.00 0.00 2.17
2394 3976 7.054491 ACATTTTAGAGTGCTGGTTTTGATT 57.946 32.000 0.00 0.00 0.00 2.57
2395 3977 6.655078 ACATTTTAGAGTGCTGGTTTTGAT 57.345 33.333 0.00 0.00 0.00 2.57
2489 4107 6.622833 AGCTTTGTATGCTTGCAAAATTTT 57.377 29.167 14.93 0.00 37.06 1.82
2506 4124 7.769272 TCTGGTAATTTTGACAAAAGCTTTG 57.231 32.000 13.54 9.55 33.22 2.77
2507 4125 8.785329 TTTCTGGTAATTTTGACAAAAGCTTT 57.215 26.923 17.73 5.69 33.22 3.51
2512 4130 8.314751 TGACCTTTTCTGGTAATTTTGACAAAA 58.685 29.630 15.39 15.39 41.00 2.44
2583 4203 3.198635 CCTCCTGAACTCAAATGCTCCTA 59.801 47.826 0.00 0.00 0.00 2.94
2638 4273 3.961408 AGTACTGGCCGTATCAATCTTCT 59.039 43.478 10.02 0.00 0.00 2.85
2639 4274 4.299978 GAGTACTGGCCGTATCAATCTTC 58.700 47.826 0.00 0.00 0.00 2.87
2648 4283 0.040058 TCTTGGGAGTACTGGCCGTA 59.960 55.000 0.00 0.12 0.00 4.02
2650 4285 0.541863 AATCTTGGGAGTACTGGCCG 59.458 55.000 0.00 0.00 0.00 6.13
2651 4286 2.290960 ACAAATCTTGGGAGTACTGGCC 60.291 50.000 0.00 0.00 34.12 5.36
2652 4287 3.073274 ACAAATCTTGGGAGTACTGGC 57.927 47.619 0.00 0.00 34.12 4.85
2654 4289 7.556844 ACATACTACAAATCTTGGGAGTACTG 58.443 38.462 0.00 0.00 36.60 2.74
2661 4296 8.977505 CAAACAAAACATACTACAAATCTTGGG 58.022 33.333 0.00 0.00 34.12 4.12
2716 4638 0.901827 TCCCGATTTAGAGCAGTGCA 59.098 50.000 19.20 0.00 0.00 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.