Multiple sequence alignment - TraesCS1A01G159400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G159400 chr1A 100.000 3796 0 0 1 3796 285356811 285353016 0.000000e+00 7011
1 TraesCS1A01G159400 chr1A 93.210 324 21 1 3473 3796 585985387 585985709 3.430000e-130 475
2 TraesCS1A01G159400 chr1A 94.792 96 4 1 2992 3087 241914883 241914977 8.500000e-32 148
3 TraesCS1A01G159400 chr1A 94.792 96 4 1 2992 3087 361888292 361888386 8.500000e-32 148
4 TraesCS1A01G159400 chr1A 89.873 79 5 3 120 196 267195704 267195781 8.680000e-17 99
5 TraesCS1A01G159400 chr1D 94.715 1911 68 14 208 2109 220928230 220926344 0.000000e+00 2939
6 TraesCS1A01G159400 chr1D 95.450 901 30 4 2109 2999 220926308 220925409 0.000000e+00 1426
7 TraesCS1A01G159400 chr1D 94.221 398 21 2 3079 3476 220925412 220925017 1.170000e-169 606
8 TraesCS1A01G159400 chr1B 94.145 1298 62 7 825 2109 317365305 317364009 0.000000e+00 1964
9 TraesCS1A01G159400 chr1B 95.333 900 33 3 2109 2999 317363973 317363074 0.000000e+00 1421
10 TraesCS1A01G159400 chr1B 92.943 581 28 7 208 784 317365871 317365300 0.000000e+00 833
11 TraesCS1A01G159400 chr1B 93.233 399 24 3 3079 3476 317363077 317362681 5.460000e-163 584
12 TraesCS1A01G159400 chr3D 92.500 320 20 3 3472 3791 591376001 591376316 4.470000e-124 455
13 TraesCS1A01G159400 chr3D 91.049 324 28 1 3468 3791 47338867 47339189 1.620000e-118 436
14 TraesCS1A01G159400 chr3D 90.966 321 27 2 3471 3791 335200722 335200404 7.530000e-117 431
15 TraesCS1A01G159400 chr5A 91.824 318 25 1 3474 3791 555333969 555333653 3.480000e-120 442
16 TraesCS1A01G159400 chr5A 90.769 325 25 4 3468 3791 313885377 313885697 2.710000e-116 429
17 TraesCS1A01G159400 chr5A 90.361 83 7 1 119 200 504722319 504722401 1.440000e-19 108
18 TraesCS1A01G159400 chr5D 91.456 316 26 1 3476 3791 256271016 256270702 2.090000e-117 433
19 TraesCS1A01G159400 chr5D 91.195 318 27 1 3474 3791 445036276 445036592 7.530000e-117 431
20 TraesCS1A01G159400 chr5D 90.909 110 7 3 2974 3082 453867973 453867866 1.100000e-30 145
21 TraesCS1A01G159400 chr4D 90.966 321 28 1 3476 3796 446118647 446118328 7.530000e-117 431
22 TraesCS1A01G159400 chr7D 96.774 93 2 1 2990 3082 310968307 310968216 1.830000e-33 154
23 TraesCS1A01G159400 chr2B 95.745 94 2 2 2990 3082 254692209 254692301 2.360000e-32 150
24 TraesCS1A01G159400 chr7A 94.792 96 4 1 2992 3087 81178181 81178087 8.500000e-32 148
25 TraesCS1A01G159400 chr7A 88.889 81 8 1 120 199 39582506 39582426 8.680000e-17 99
26 TraesCS1A01G159400 chr6A 93.939 99 4 2 2998 3094 201248393 201248491 8.500000e-32 148
27 TraesCS1A01G159400 chr3A 94.792 96 4 1 2992 3087 441498552 441498458 8.500000e-32 148
28 TraesCS1A01G159400 chr3A 93.878 98 5 1 2997 3093 215966978 215966881 3.060000e-31 147
29 TraesCS1A01G159400 chrUn 88.095 84 8 2 120 202 65718149 65718231 8.680000e-17 99
30 TraesCS1A01G159400 chrUn 88.095 84 8 2 120 202 461006089 461006171 8.680000e-17 99
31 TraesCS1A01G159400 chr5B 88.095 84 8 2 120 202 32061871 32061953 8.680000e-17 99
32 TraesCS1A01G159400 chr5B 88.095 84 8 2 120 202 32063444 32063526 8.680000e-17 99
33 TraesCS1A01G159400 chr4A 89.744 78 7 1 120 196 574001448 574001525 8.680000e-17 99
34 TraesCS1A01G159400 chr2D 90.667 75 6 1 119 192 468088271 468088345 8.680000e-17 99


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G159400 chr1A 285353016 285356811 3795 True 7011.0 7011 100.000000 1 3796 1 chr1A.!!$R1 3795
1 TraesCS1A01G159400 chr1D 220925017 220928230 3213 True 1657.0 2939 94.795333 208 3476 3 chr1D.!!$R1 3268
2 TraesCS1A01G159400 chr1B 317362681 317365871 3190 True 1200.5 1964 93.913500 208 3476 4 chr1B.!!$R1 3268

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
174 175 0.106669 GGGGAGAGGCGGCTTATTTT 60.107 55.0 14.76 0.0 0.00 1.82 F
586 591 0.320508 ACCCGACTTTTCCTCGCTTC 60.321 55.0 0.00 0.0 0.00 3.86 F
1269 1282 0.037046 ATGCTGATCGTGCTGTCACA 60.037 50.0 11.02 0.0 43.28 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1227 1240 0.326264 TGCTCTTTCTCCTGGGCTTC 59.674 55.0 0.0 0.0 0.00 3.86 R
1977 1993 1.135094 AAGCCAGATCGGTCCATGAT 58.865 50.0 0.0 0.0 36.97 2.45 R
3064 3131 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.0 0.0 0.0 0.00 3.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.947055 ACTTCTTTTAACCGTAAGTGAGTAAA 57.053 30.769 0.00 0.00 0.00 2.01
27 28 9.551734 ACTTCTTTTAACCGTAAGTGAGTAAAT 57.448 29.630 0.00 0.00 0.00 1.40
28 29 9.807386 CTTCTTTTAACCGTAAGTGAGTAAATG 57.193 33.333 0.00 0.00 0.00 2.32
29 30 8.891671 TCTTTTAACCGTAAGTGAGTAAATGT 57.108 30.769 0.00 0.00 0.00 2.71
30 31 9.328845 TCTTTTAACCGTAAGTGAGTAAATGTT 57.671 29.630 0.00 0.00 0.00 2.71
31 32 9.377383 CTTTTAACCGTAAGTGAGTAAATGTTG 57.623 33.333 0.00 0.00 0.00 3.33
32 33 8.659925 TTTAACCGTAAGTGAGTAAATGTTGA 57.340 30.769 0.00 0.00 0.00 3.18
33 34 8.659925 TTAACCGTAAGTGAGTAAATGTTGAA 57.340 30.769 0.00 0.00 0.00 2.69
34 35 7.739498 AACCGTAAGTGAGTAAATGTTGAAT 57.261 32.000 0.00 0.00 0.00 2.57
35 36 7.739498 ACCGTAAGTGAGTAAATGTTGAATT 57.261 32.000 0.00 0.00 0.00 2.17
36 37 8.836268 ACCGTAAGTGAGTAAATGTTGAATTA 57.164 30.769 0.00 0.00 0.00 1.40
37 38 8.715088 ACCGTAAGTGAGTAAATGTTGAATTAC 58.285 33.333 0.00 0.00 33.25 1.89
38 39 8.714179 CCGTAAGTGAGTAAATGTTGAATTACA 58.286 33.333 0.00 0.00 35.06 2.41
54 55 9.550811 GTTGAATTACAAAAGATAACGTTAGGG 57.449 33.333 14.25 2.29 40.36 3.53
55 56 8.271312 TGAATTACAAAAGATAACGTTAGGGG 57.729 34.615 14.25 2.95 0.00 4.79
56 57 6.688637 ATTACAAAAGATAACGTTAGGGGC 57.311 37.500 14.25 3.51 0.00 5.80
57 58 3.349927 ACAAAAGATAACGTTAGGGGCC 58.650 45.455 14.25 0.00 0.00 5.80
58 59 3.244981 ACAAAAGATAACGTTAGGGGCCA 60.245 43.478 14.25 0.00 0.00 5.36
59 60 3.277142 AAAGATAACGTTAGGGGCCAG 57.723 47.619 14.25 0.00 0.00 4.85
60 61 1.875488 AGATAACGTTAGGGGCCAGT 58.125 50.000 14.25 0.00 0.00 4.00
61 62 2.193993 AGATAACGTTAGGGGCCAGTT 58.806 47.619 14.25 5.87 0.00 3.16
62 63 2.169978 AGATAACGTTAGGGGCCAGTTC 59.830 50.000 14.25 3.15 0.00 3.01
63 64 1.648116 TAACGTTAGGGGCCAGTTCT 58.352 50.000 4.39 0.00 0.00 3.01
64 65 0.769247 AACGTTAGGGGCCAGTTCTT 59.231 50.000 4.39 0.00 0.00 2.52
65 66 0.769247 ACGTTAGGGGCCAGTTCTTT 59.231 50.000 4.39 0.00 0.00 2.52
66 67 1.144298 ACGTTAGGGGCCAGTTCTTTT 59.856 47.619 4.39 0.00 0.00 2.27
67 68 1.539827 CGTTAGGGGCCAGTTCTTTTG 59.460 52.381 4.39 0.00 0.00 2.44
68 69 1.893137 GTTAGGGGCCAGTTCTTTTGG 59.107 52.381 4.39 0.00 38.78 3.28
69 70 1.154430 TAGGGGCCAGTTCTTTTGGT 58.846 50.000 4.39 0.00 38.02 3.67
70 71 1.154430 AGGGGCCAGTTCTTTTGGTA 58.846 50.000 4.39 0.00 38.02 3.25
71 72 1.075536 AGGGGCCAGTTCTTTTGGTAG 59.924 52.381 4.39 0.00 38.02 3.18
72 73 0.888619 GGGCCAGTTCTTTTGGTAGC 59.111 55.000 4.39 0.00 38.02 3.58
73 74 1.547901 GGGCCAGTTCTTTTGGTAGCT 60.548 52.381 4.39 0.00 38.02 3.32
74 75 2.239400 GGCCAGTTCTTTTGGTAGCTT 58.761 47.619 0.00 0.00 38.02 3.74
75 76 3.418047 GGCCAGTTCTTTTGGTAGCTTA 58.582 45.455 0.00 0.00 38.02 3.09
76 77 3.824443 GGCCAGTTCTTTTGGTAGCTTAA 59.176 43.478 0.00 0.00 38.02 1.85
77 78 4.279922 GGCCAGTTCTTTTGGTAGCTTAAA 59.720 41.667 0.00 0.00 38.02 1.52
78 79 5.221362 GGCCAGTTCTTTTGGTAGCTTAAAA 60.221 40.000 0.00 0.00 38.02 1.52
79 80 5.920840 GCCAGTTCTTTTGGTAGCTTAAAAG 59.079 40.000 17.54 17.54 42.41 2.27
80 81 6.238925 GCCAGTTCTTTTGGTAGCTTAAAAGA 60.239 38.462 20.25 20.25 45.81 2.52
81 82 7.523873 GCCAGTTCTTTTGGTAGCTTAAAAGAT 60.524 37.037 22.69 13.12 46.35 2.40
82 83 9.010029 CCAGTTCTTTTGGTAGCTTAAAAGATA 57.990 33.333 22.69 15.39 46.35 1.98
85 86 9.343103 GTTCTTTTGGTAGCTTAAAAGATAAGC 57.657 33.333 22.69 11.28 46.35 3.09
92 93 3.953766 GCTTAAAAGATAAGCCGCCTTC 58.046 45.455 8.63 0.00 42.88 3.46
93 94 3.628032 GCTTAAAAGATAAGCCGCCTTCT 59.372 43.478 8.63 0.00 42.88 2.85
94 95 4.096532 GCTTAAAAGATAAGCCGCCTTCTT 59.903 41.667 8.63 0.00 42.88 2.52
95 96 5.730847 GCTTAAAAGATAAGCCGCCTTCTTC 60.731 44.000 8.63 0.00 42.88 2.87
96 97 2.333688 AAGATAAGCCGCCTTCTTCC 57.666 50.000 0.00 0.00 32.47 3.46
97 98 0.470341 AGATAAGCCGCCTTCTTCCC 59.530 55.000 0.00 0.00 32.47 3.97
98 99 0.180406 GATAAGCCGCCTTCTTCCCA 59.820 55.000 0.00 0.00 32.47 4.37
99 100 0.181350 ATAAGCCGCCTTCTTCCCAG 59.819 55.000 0.00 0.00 32.47 4.45
100 101 2.536997 TAAGCCGCCTTCTTCCCAGC 62.537 60.000 0.00 0.00 32.47 4.85
101 102 4.416738 GCCGCCTTCTTCCCAGCT 62.417 66.667 0.00 0.00 0.00 4.24
102 103 2.352805 CCGCCTTCTTCCCAGCTT 59.647 61.111 0.00 0.00 0.00 3.74
103 104 1.303643 CCGCCTTCTTCCCAGCTTT 60.304 57.895 0.00 0.00 0.00 3.51
104 105 0.895559 CCGCCTTCTTCCCAGCTTTT 60.896 55.000 0.00 0.00 0.00 2.27
105 106 0.961753 CGCCTTCTTCCCAGCTTTTT 59.038 50.000 0.00 0.00 0.00 1.94
120 121 3.618171 TTTTTCGTAAGCCGCCTCT 57.382 47.368 0.00 0.00 36.19 3.69
121 122 1.435577 TTTTTCGTAAGCCGCCTCTC 58.564 50.000 0.00 0.00 36.19 3.20
122 123 0.319083 TTTTCGTAAGCCGCCTCTCA 59.681 50.000 0.00 0.00 36.19 3.27
123 124 0.319083 TTTCGTAAGCCGCCTCTCAA 59.681 50.000 0.00 0.00 36.19 3.02
124 125 0.389426 TTCGTAAGCCGCCTCTCAAC 60.389 55.000 0.00 0.00 36.19 3.18
125 126 1.080093 CGTAAGCCGCCTCTCAACA 60.080 57.895 0.00 0.00 0.00 3.33
126 127 0.669318 CGTAAGCCGCCTCTCAACAA 60.669 55.000 0.00 0.00 0.00 2.83
127 128 1.519408 GTAAGCCGCCTCTCAACAAA 58.481 50.000 0.00 0.00 0.00 2.83
128 129 1.877443 GTAAGCCGCCTCTCAACAAAA 59.123 47.619 0.00 0.00 0.00 2.44
129 130 1.620822 AAGCCGCCTCTCAACAAAAT 58.379 45.000 0.00 0.00 0.00 1.82
130 131 1.620822 AGCCGCCTCTCAACAAAATT 58.379 45.000 0.00 0.00 0.00 1.82
131 132 1.963515 AGCCGCCTCTCAACAAAATTT 59.036 42.857 0.00 0.00 0.00 1.82
132 133 2.029918 AGCCGCCTCTCAACAAAATTTC 60.030 45.455 0.00 0.00 0.00 2.17
133 134 2.288152 GCCGCCTCTCAACAAAATTTCA 60.288 45.455 0.00 0.00 0.00 2.69
134 135 3.568538 CCGCCTCTCAACAAAATTTCAG 58.431 45.455 0.00 0.00 0.00 3.02
135 136 3.253188 CCGCCTCTCAACAAAATTTCAGA 59.747 43.478 0.00 0.00 0.00 3.27
136 137 4.470462 CGCCTCTCAACAAAATTTCAGAG 58.530 43.478 0.00 0.00 0.00 3.35
137 138 4.233005 GCCTCTCAACAAAATTTCAGAGC 58.767 43.478 0.00 0.00 0.00 4.09
138 139 4.470462 CCTCTCAACAAAATTTCAGAGCG 58.530 43.478 0.00 0.00 0.00 5.03
139 140 4.470462 CTCTCAACAAAATTTCAGAGCGG 58.530 43.478 0.00 0.00 0.00 5.52
140 141 2.982470 CTCAACAAAATTTCAGAGCGGC 59.018 45.455 0.00 0.00 0.00 6.53
141 142 2.622942 TCAACAAAATTTCAGAGCGGCT 59.377 40.909 0.00 0.00 0.00 5.52
142 143 3.068024 TCAACAAAATTTCAGAGCGGCTT 59.932 39.130 2.97 0.00 0.00 4.35
143 144 4.277174 TCAACAAAATTTCAGAGCGGCTTA 59.723 37.500 2.97 0.00 0.00 3.09
144 145 5.048083 TCAACAAAATTTCAGAGCGGCTTAT 60.048 36.000 2.97 0.00 0.00 1.73
145 146 5.391312 ACAAAATTTCAGAGCGGCTTATT 57.609 34.783 2.97 0.00 0.00 1.40
146 147 5.783111 ACAAAATTTCAGAGCGGCTTATTT 58.217 33.333 2.97 3.46 0.00 1.40
147 148 6.223120 ACAAAATTTCAGAGCGGCTTATTTT 58.777 32.000 2.97 8.90 0.00 1.82
148 149 6.705825 ACAAAATTTCAGAGCGGCTTATTTTT 59.294 30.769 2.97 3.04 0.00 1.94
165 166 2.194201 TTTTAAGTTGGGGAGAGGCG 57.806 50.000 0.00 0.00 0.00 5.52
166 167 0.326927 TTTAAGTTGGGGAGAGGCGG 59.673 55.000 0.00 0.00 0.00 6.13
167 168 2.193087 TTAAGTTGGGGAGAGGCGGC 62.193 60.000 0.00 0.00 0.00 6.53
169 170 4.035102 GTTGGGGAGAGGCGGCTT 62.035 66.667 14.76 2.75 0.00 4.35
170 171 2.285069 TTGGGGAGAGGCGGCTTA 60.285 61.111 14.76 0.00 0.00 3.09
171 172 1.692749 TTGGGGAGAGGCGGCTTAT 60.693 57.895 14.76 4.91 0.00 1.73
172 173 1.279025 TTGGGGAGAGGCGGCTTATT 61.279 55.000 14.76 1.51 0.00 1.40
173 174 1.279025 TGGGGAGAGGCGGCTTATTT 61.279 55.000 14.76 0.00 0.00 1.40
174 175 0.106669 GGGGAGAGGCGGCTTATTTT 60.107 55.000 14.76 0.00 0.00 1.82
175 176 1.685180 GGGGAGAGGCGGCTTATTTTT 60.685 52.381 14.76 0.00 0.00 1.94
192 193 3.821421 TTTTTAAGCCGCCCAAAGAAA 57.179 38.095 0.00 0.00 0.00 2.52
193 194 4.344359 TTTTTAAGCCGCCCAAAGAAAT 57.656 36.364 0.00 0.00 0.00 2.17
194 195 3.311486 TTTAAGCCGCCCAAAGAAATG 57.689 42.857 0.00 0.00 0.00 2.32
195 196 2.208132 TAAGCCGCCCAAAGAAATGA 57.792 45.000 0.00 0.00 0.00 2.57
196 197 1.560505 AAGCCGCCCAAAGAAATGAT 58.439 45.000 0.00 0.00 0.00 2.45
197 198 1.106285 AGCCGCCCAAAGAAATGATC 58.894 50.000 0.00 0.00 0.00 2.92
198 199 1.106285 GCCGCCCAAAGAAATGATCT 58.894 50.000 0.00 0.00 41.32 2.75
199 200 2.092429 AGCCGCCCAAAGAAATGATCTA 60.092 45.455 0.00 0.00 37.42 1.98
200 201 2.291741 GCCGCCCAAAGAAATGATCTAG 59.708 50.000 0.00 0.00 37.42 2.43
201 202 3.808728 CCGCCCAAAGAAATGATCTAGA 58.191 45.455 0.00 0.00 37.42 2.43
202 203 4.392940 CCGCCCAAAGAAATGATCTAGAT 58.607 43.478 4.47 4.47 37.42 1.98
203 204 4.214971 CCGCCCAAAGAAATGATCTAGATG 59.785 45.833 10.74 0.00 37.42 2.90
204 205 4.818546 CGCCCAAAGAAATGATCTAGATGT 59.181 41.667 10.74 0.00 37.42 3.06
205 206 5.991606 CGCCCAAAGAAATGATCTAGATGTA 59.008 40.000 10.74 0.00 37.42 2.29
206 207 6.146837 CGCCCAAAGAAATGATCTAGATGTAG 59.853 42.308 10.74 0.00 37.42 2.74
219 220 5.984725 TCTAGATGTAGAAATTCCCGCAAA 58.015 37.500 0.00 0.00 31.94 3.68
287 290 9.629878 TTAACCTTAGAAAAGTTCACCAATACA 57.370 29.630 0.00 0.00 0.00 2.29
293 296 5.358725 AGAAAAGTTCACCAATACAAACGGT 59.641 36.000 0.00 0.00 0.00 4.83
422 425 0.675837 AATCCGTCGTCTCGTCCTCA 60.676 55.000 0.00 0.00 0.00 3.86
433 436 3.706373 GTCCTCAGCCGGCCTTGA 61.706 66.667 26.15 20.64 0.00 3.02
579 584 3.351450 GGCACACCCGACTTTTCC 58.649 61.111 0.00 0.00 0.00 3.13
580 585 1.228154 GGCACACCCGACTTTTCCT 60.228 57.895 0.00 0.00 0.00 3.36
581 586 1.235281 GGCACACCCGACTTTTCCTC 61.235 60.000 0.00 0.00 0.00 3.71
582 587 1.566018 GCACACCCGACTTTTCCTCG 61.566 60.000 0.00 0.00 0.00 4.63
583 588 1.301479 ACACCCGACTTTTCCTCGC 60.301 57.895 0.00 0.00 0.00 5.03
586 591 0.320508 ACCCGACTTTTCCTCGCTTC 60.321 55.000 0.00 0.00 0.00 3.86
587 592 1.019805 CCCGACTTTTCCTCGCTTCC 61.020 60.000 0.00 0.00 0.00 3.46
588 593 1.019805 CCGACTTTTCCTCGCTTCCC 61.020 60.000 0.00 0.00 0.00 3.97
589 594 1.019805 CGACTTTTCCTCGCTTCCCC 61.020 60.000 0.00 0.00 0.00 4.81
590 595 0.325272 GACTTTTCCTCGCTTCCCCT 59.675 55.000 0.00 0.00 0.00 4.79
591 596 0.325272 ACTTTTCCTCGCTTCCCCTC 59.675 55.000 0.00 0.00 0.00 4.30
592 597 0.615850 CTTTTCCTCGCTTCCCCTCT 59.384 55.000 0.00 0.00 0.00 3.69
593 598 0.613777 TTTTCCTCGCTTCCCCTCTC 59.386 55.000 0.00 0.00 0.00 3.20
678 684 2.582436 GCCCCGTCGGAAAGATCA 59.418 61.111 14.39 0.00 0.00 2.92
721 727 2.632512 GGGAAAATTGGTGCTTCTTGGA 59.367 45.455 0.00 0.00 0.00 3.53
732 738 3.942115 GTGCTTCTTGGATTCTAGGGTTC 59.058 47.826 0.00 0.00 0.00 3.62
800 806 0.953960 CTTGGGGTTGCGGTGTAGTC 60.954 60.000 0.00 0.00 0.00 2.59
967 980 2.290960 ACTGGGTAGTCAAATTCAGGGC 60.291 50.000 0.00 0.00 28.79 5.19
1060 1073 2.449464 CTTGGATGATGAAACCCTGCA 58.551 47.619 0.00 0.00 0.00 4.41
1122 1135 1.694150 TCGGCAGAATCTGATAAGGGG 59.306 52.381 15.38 0.00 32.44 4.79
1135 1148 0.949582 TAAGGGGTCAGGGGCTCTAT 59.050 55.000 0.00 0.00 0.00 1.98
1194 1207 4.181010 CCAGAGGATGCCGGTGGG 62.181 72.222 1.90 0.00 30.68 4.61
1227 1240 0.179000 AGCGATGCCAGGGTAAAGAG 59.821 55.000 0.00 0.00 0.00 2.85
1231 1244 2.293170 GATGCCAGGGTAAAGAGAAGC 58.707 52.381 0.00 0.00 0.00 3.86
1269 1282 0.037046 ATGCTGATCGTGCTGTCACA 60.037 50.000 11.02 0.00 43.28 3.58
1280 1293 3.187022 CGTGCTGTCACAGATGAATTTGA 59.813 43.478 9.70 0.00 43.28 2.69
1353 1366 2.236146 TGCTCCGAAGAATAGCAGGAAA 59.764 45.455 0.00 0.00 0.00 3.13
1561 1574 6.129393 CGTAAGAATGTCACAAAAGTGACTG 58.871 40.000 24.00 5.76 46.92 3.51
1623 1636 6.427853 CGGATAATGTTGGATCAGAAGCATTA 59.572 38.462 11.32 11.32 34.63 1.90
1712 1725 9.125026 AGAGGTAAACCATAATTCTTATTGCAG 57.875 33.333 1.26 0.00 38.89 4.41
1785 1799 4.783055 TGCAATTCCCCTTAAATACGCTA 58.217 39.130 0.00 0.00 0.00 4.26
1816 1830 6.835914 GTTCATTACTTCACTGAACATCTGG 58.164 40.000 9.18 0.00 45.09 3.86
1827 1841 4.885907 ACTGAACATCTGGGAATTATGCAG 59.114 41.667 0.00 0.00 0.00 4.41
1831 1845 3.220110 CATCTGGGAATTATGCAGTGCT 58.780 45.455 17.60 4.48 0.00 4.40
1833 1847 3.282021 TCTGGGAATTATGCAGTGCTTC 58.718 45.455 17.60 11.24 0.00 3.86
1844 1858 4.191033 TGCAGTGCTTCCCAATTTATTG 57.809 40.909 17.60 0.00 37.52 1.90
1871 1885 1.236616 TGTTGATTGACGCAGGCAGG 61.237 55.000 0.00 0.00 0.00 4.85
1977 1993 6.088541 AGGAGTGACCCTAGTGAATACTTA 57.911 41.667 0.00 0.00 37.60 2.24
2007 2023 2.097825 GATCTGGCTTGCACCTTGATT 58.902 47.619 0.00 0.00 0.00 2.57
2016 2032 6.605194 TGGCTTGCACCTTGATTATATTTGTA 59.395 34.615 0.00 0.00 0.00 2.41
2045 2061 4.649692 ACTCTCAAGAGACAAACATGCAT 58.350 39.130 13.83 0.00 44.74 3.96
2098 2118 9.039870 GTCCTATCATTAGTTTGAAGACATGAG 57.960 37.037 0.00 0.00 30.59 2.90
2121 2177 8.363390 TGAGTAAGCATGATAATAGGAGACTTG 58.637 37.037 0.00 0.00 43.67 3.16
2160 2216 4.643784 ACATCTTCTCCATTGAATTGAGGC 59.356 41.667 6.44 0.00 0.00 4.70
2173 2229 6.469782 TGAATTGAGGCCCTAATTTCATTC 57.530 37.500 14.08 9.53 0.00 2.67
2178 2234 4.018506 TGAGGCCCTAATTTCATTCTGTGA 60.019 41.667 0.00 0.00 34.25 3.58
2367 2425 5.871396 AGATATACGGACCACAAAGACAT 57.129 39.130 0.00 0.00 0.00 3.06
2402 2460 4.087892 CCTCCACGGCCTCCAGTG 62.088 72.222 0.00 0.55 38.05 3.66
2412 2470 1.063867 GGCCTCCAGTGTCTACTCCTA 60.064 57.143 0.00 0.00 34.07 2.94
2544 2602 4.346418 ACAAGAGACATGAAGAACCAGAGT 59.654 41.667 0.00 0.00 0.00 3.24
2553 2611 0.759346 AGAACCAGAGTGTCCACCAC 59.241 55.000 0.00 0.00 44.89 4.16
2624 2682 1.486726 GGACCCCTGTGGAATAGTGAG 59.513 57.143 0.00 0.00 38.00 3.51
2663 2721 3.000819 CCCGAGGCTGTGGTACCA 61.001 66.667 11.60 11.60 0.00 3.25
2816 2874 3.705043 AGCAAAGTTGAAGTGCTGAAG 57.295 42.857 0.00 0.00 46.58 3.02
2824 2882 2.068519 TGAAGTGCTGAAGTGCATACG 58.931 47.619 0.00 0.00 45.23 3.06
2896 2955 3.685550 GCATGGCCTGTAACTATTGTCCT 60.686 47.826 3.32 0.00 0.00 3.85
2966 3033 5.576774 ACAAGTCGCTTTTCTTTTCCTTTTG 59.423 36.000 0.00 0.00 0.00 2.44
2994 3061 7.287696 GGGGAGAATAATGTTGGTCATTTGTAT 59.712 37.037 0.00 0.00 43.33 2.29
3002 3069 8.732746 AATGTTGGTCATTTGTATAGTACTCC 57.267 34.615 0.00 0.00 43.33 3.85
3003 3070 6.646267 TGTTGGTCATTTGTATAGTACTCCC 58.354 40.000 0.00 0.00 0.00 4.30
3004 3071 6.442564 TGTTGGTCATTTGTATAGTACTCCCT 59.557 38.462 0.00 0.00 0.00 4.20
3005 3072 6.726490 TGGTCATTTGTATAGTACTCCCTC 57.274 41.667 0.00 0.00 0.00 4.30
3006 3073 6.441222 TGGTCATTTGTATAGTACTCCCTCT 58.559 40.000 0.00 0.00 0.00 3.69
3007 3074 6.323996 TGGTCATTTGTATAGTACTCCCTCTG 59.676 42.308 0.00 0.00 0.00 3.35
3008 3075 6.324254 GGTCATTTGTATAGTACTCCCTCTGT 59.676 42.308 0.00 0.00 0.00 3.41
3009 3076 7.427214 GTCATTTGTATAGTACTCCCTCTGTC 58.573 42.308 0.00 0.00 0.00 3.51
3010 3077 6.550108 TCATTTGTATAGTACTCCCTCTGTCC 59.450 42.308 0.00 0.00 0.00 4.02
3011 3078 4.450305 TGTATAGTACTCCCTCTGTCCC 57.550 50.000 0.00 0.00 0.00 4.46
3012 3079 2.660670 ATAGTACTCCCTCTGTCCCG 57.339 55.000 0.00 0.00 0.00 5.14
3013 3080 0.549950 TAGTACTCCCTCTGTCCCGG 59.450 60.000 0.00 0.00 0.00 5.73
3014 3081 1.212934 AGTACTCCCTCTGTCCCGGA 61.213 60.000 0.73 0.00 0.00 5.14
3015 3082 0.324091 GTACTCCCTCTGTCCCGGAA 60.324 60.000 0.73 0.00 0.00 4.30
3016 3083 0.635009 TACTCCCTCTGTCCCGGAAT 59.365 55.000 0.73 0.00 0.00 3.01
3017 3084 0.635009 ACTCCCTCTGTCCCGGAATA 59.365 55.000 0.73 0.00 0.00 1.75
3018 3085 1.220750 ACTCCCTCTGTCCCGGAATAT 59.779 52.381 0.73 0.00 0.00 1.28
3019 3086 2.449730 ACTCCCTCTGTCCCGGAATATA 59.550 50.000 0.73 0.00 0.00 0.86
3020 3087 3.116862 ACTCCCTCTGTCCCGGAATATAA 60.117 47.826 0.73 0.00 0.00 0.98
3021 3088 3.507411 TCCCTCTGTCCCGGAATATAAG 58.493 50.000 0.73 0.00 0.00 1.73
3022 3089 3.141460 TCCCTCTGTCCCGGAATATAAGA 59.859 47.826 0.73 0.00 0.00 2.10
3023 3090 3.901844 CCCTCTGTCCCGGAATATAAGAA 59.098 47.826 0.73 0.00 0.00 2.52
3024 3091 4.262506 CCCTCTGTCCCGGAATATAAGAAC 60.263 50.000 0.73 0.00 0.00 3.01
3025 3092 4.547532 CTCTGTCCCGGAATATAAGAACG 58.452 47.826 0.73 0.00 0.00 3.95
3026 3093 3.956199 TCTGTCCCGGAATATAAGAACGT 59.044 43.478 0.73 0.00 0.00 3.99
3027 3094 4.403432 TCTGTCCCGGAATATAAGAACGTT 59.597 41.667 0.73 0.00 0.00 3.99
3028 3095 5.088680 TGTCCCGGAATATAAGAACGTTT 57.911 39.130 0.73 0.00 0.00 3.60
3029 3096 5.490159 TGTCCCGGAATATAAGAACGTTTT 58.510 37.500 0.73 0.00 0.00 2.43
3030 3097 5.939296 TGTCCCGGAATATAAGAACGTTTTT 59.061 36.000 0.73 9.22 0.00 1.94
3031 3098 6.128227 TGTCCCGGAATATAAGAACGTTTTTG 60.128 38.462 13.87 0.00 0.00 2.44
3032 3099 6.092533 GTCCCGGAATATAAGAACGTTTTTGA 59.907 38.462 13.87 2.81 0.00 2.69
3033 3100 6.092533 TCCCGGAATATAAGAACGTTTTTGAC 59.907 38.462 13.87 0.00 0.00 3.18
3034 3101 6.128227 CCCGGAATATAAGAACGTTTTTGACA 60.128 38.462 13.87 0.01 0.00 3.58
3035 3102 6.739550 CCGGAATATAAGAACGTTTTTGACAC 59.260 38.462 13.87 2.68 0.00 3.67
3036 3103 6.739550 CGGAATATAAGAACGTTTTTGACACC 59.260 38.462 13.87 9.46 0.00 4.16
3037 3104 7.571613 CGGAATATAAGAACGTTTTTGACACCA 60.572 37.037 13.87 0.00 0.00 4.17
3038 3105 8.241367 GGAATATAAGAACGTTTTTGACACCAT 58.759 33.333 13.87 1.56 0.00 3.55
3039 3106 8.964420 AATATAAGAACGTTTTTGACACCATG 57.036 30.769 13.87 0.00 0.00 3.66
3040 3107 3.078594 AGAACGTTTTTGACACCATGC 57.921 42.857 0.46 0.00 0.00 4.06
3041 3108 2.687935 AGAACGTTTTTGACACCATGCT 59.312 40.909 0.46 0.00 0.00 3.79
3042 3109 3.880490 AGAACGTTTTTGACACCATGCTA 59.120 39.130 0.46 0.00 0.00 3.49
3043 3110 3.896648 ACGTTTTTGACACCATGCTAG 57.103 42.857 0.00 0.00 0.00 3.42
3044 3111 3.211045 ACGTTTTTGACACCATGCTAGT 58.789 40.909 0.00 0.00 0.00 2.57
3045 3112 3.003275 ACGTTTTTGACACCATGCTAGTG 59.997 43.478 0.00 0.00 41.15 2.74
3054 3121 5.103290 ACACCATGCTAGTGTTAAAAACG 57.897 39.130 0.89 0.00 46.07 3.60
3055 3122 4.577283 ACACCATGCTAGTGTTAAAAACGT 59.423 37.500 0.89 0.00 46.07 3.99
3056 3123 5.066764 ACACCATGCTAGTGTTAAAAACGTT 59.933 36.000 0.00 0.00 46.07 3.99
3057 3124 5.623673 CACCATGCTAGTGTTAAAAACGTTC 59.376 40.000 0.00 0.00 0.00 3.95
3058 3125 5.529800 ACCATGCTAGTGTTAAAAACGTTCT 59.470 36.000 0.00 0.00 0.00 3.01
3059 3126 6.038936 ACCATGCTAGTGTTAAAAACGTTCTT 59.961 34.615 0.00 0.00 0.00 2.52
3060 3127 7.227116 ACCATGCTAGTGTTAAAAACGTTCTTA 59.773 33.333 0.00 0.00 0.00 2.10
3061 3128 8.234546 CCATGCTAGTGTTAAAAACGTTCTTAT 58.765 33.333 0.00 0.00 0.00 1.73
3072 3139 9.609950 TTAAAAACGTTCTTATATTTTGGGACG 57.390 29.630 0.00 0.00 0.00 4.79
3073 3140 5.806366 AACGTTCTTATATTTTGGGACGG 57.194 39.130 0.00 0.00 0.00 4.79
3074 3141 5.088680 ACGTTCTTATATTTTGGGACGGA 57.911 39.130 0.00 0.00 0.00 4.69
3075 3142 5.114081 ACGTTCTTATATTTTGGGACGGAG 58.886 41.667 0.00 0.00 0.00 4.63
3076 3143 4.510340 CGTTCTTATATTTTGGGACGGAGG 59.490 45.833 0.00 0.00 0.00 4.30
3077 3144 4.699925 TCTTATATTTTGGGACGGAGGG 57.300 45.455 0.00 0.00 0.00 4.30
3078 3145 4.300345 TCTTATATTTTGGGACGGAGGGA 58.700 43.478 0.00 0.00 0.00 4.20
3079 3146 4.347000 TCTTATATTTTGGGACGGAGGGAG 59.653 45.833 0.00 0.00 0.00 4.30
3080 3147 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
3081 3148 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3082 3149 1.272807 TTTTGGGACGGAGGGAGTAG 58.727 55.000 0.00 0.00 0.00 2.57
3083 3150 0.115745 TTTGGGACGGAGGGAGTAGT 59.884 55.000 0.00 0.00 0.00 2.73
3084 3151 1.002069 TTGGGACGGAGGGAGTAGTA 58.998 55.000 0.00 0.00 0.00 1.82
3127 3195 2.371841 AGATGTTTGGTACTGCCTGTGA 59.628 45.455 0.00 0.00 38.35 3.58
3149 3217 7.094677 TGTGATGTCATTGTCATCTTACCTTTG 60.095 37.037 19.76 0.00 41.30 2.77
3167 3235 5.829924 ACCTTTGATGATCTTGACTGTGTTT 59.170 36.000 0.00 0.00 0.00 2.83
3172 3240 5.934043 TGATGATCTTGACTGTGTTTAGGTG 59.066 40.000 0.00 0.00 0.00 4.00
3178 3246 2.701423 TGACTGTGTTTAGGTGCAGGTA 59.299 45.455 0.00 0.00 33.62 3.08
3199 3268 5.048921 GGTAAAGAACCACAGGTTTAGCTTC 60.049 44.000 2.55 0.00 46.95 3.86
3203 3272 1.493022 ACCACAGGTTTAGCTTCCACA 59.507 47.619 0.00 0.00 27.29 4.17
3270 3339 2.095567 CAGTGGAAGTTCCTCAATTGCG 60.096 50.000 22.41 0.00 37.46 4.85
3271 3340 2.151202 GTGGAAGTTCCTCAATTGCGA 58.849 47.619 22.41 0.00 37.46 5.10
3289 3358 2.775890 CGATGCTGGATAGATGCCTTT 58.224 47.619 0.00 0.00 0.00 3.11
3302 3371 3.960102 AGATGCCTTTCCAGTTGTTTTGA 59.040 39.130 0.00 0.00 0.00 2.69
3385 3454 5.198602 AGGGGCATTTGTTTTCTCTAGAT 57.801 39.130 0.00 0.00 0.00 1.98
3476 3545 7.619050 AGCTATATCCATGTCAATGTCCTTAG 58.381 38.462 0.00 0.00 31.27 2.18
3477 3546 7.455953 AGCTATATCCATGTCAATGTCCTTAGA 59.544 37.037 0.00 0.00 31.27 2.10
3478 3547 7.763528 GCTATATCCATGTCAATGTCCTTAGAG 59.236 40.741 0.00 0.00 31.27 2.43
3479 3548 4.142609 TCCATGTCAATGTCCTTAGAGC 57.857 45.455 0.00 0.00 31.27 4.09
3480 3549 3.519107 TCCATGTCAATGTCCTTAGAGCA 59.481 43.478 0.00 0.00 31.27 4.26
3481 3550 4.019411 TCCATGTCAATGTCCTTAGAGCAA 60.019 41.667 0.00 0.00 31.27 3.91
3482 3551 4.095483 CCATGTCAATGTCCTTAGAGCAAC 59.905 45.833 0.00 0.00 31.27 4.17
3483 3552 4.623932 TGTCAATGTCCTTAGAGCAACT 57.376 40.909 0.00 0.00 0.00 3.16
3484 3553 4.569943 TGTCAATGTCCTTAGAGCAACTC 58.430 43.478 0.00 0.00 0.00 3.01
3485 3554 3.935828 GTCAATGTCCTTAGAGCAACTCC 59.064 47.826 0.00 0.00 0.00 3.85
3486 3555 3.582647 TCAATGTCCTTAGAGCAACTCCA 59.417 43.478 0.00 0.00 0.00 3.86
3487 3556 4.041567 TCAATGTCCTTAGAGCAACTCCAA 59.958 41.667 0.00 0.00 0.00 3.53
3488 3557 4.851639 ATGTCCTTAGAGCAACTCCAAT 57.148 40.909 0.00 0.00 0.00 3.16
3489 3558 3.942829 TGTCCTTAGAGCAACTCCAATG 58.057 45.455 0.00 0.00 0.00 2.82
3490 3559 3.274288 GTCCTTAGAGCAACTCCAATGG 58.726 50.000 0.00 0.00 0.00 3.16
3491 3560 3.055094 GTCCTTAGAGCAACTCCAATGGA 60.055 47.826 0.48 0.48 0.00 3.41
3501 3570 2.322355 CTCCAATGGAGCGACTCATT 57.678 50.000 17.25 1.46 43.29 2.57
3502 3571 2.636830 CTCCAATGGAGCGACTCATTT 58.363 47.619 17.25 0.32 43.29 2.32
3503 3572 3.012518 CTCCAATGGAGCGACTCATTTT 58.987 45.455 17.25 0.00 43.29 1.82
3504 3573 2.749076 TCCAATGGAGCGACTCATTTTG 59.251 45.455 0.00 8.17 31.08 2.44
3505 3574 2.489329 CCAATGGAGCGACTCATTTTGT 59.511 45.455 0.00 0.00 31.08 2.83
3506 3575 3.426695 CCAATGGAGCGACTCATTTTGTC 60.427 47.826 0.00 0.00 31.08 3.18
3507 3576 1.808411 TGGAGCGACTCATTTTGTCC 58.192 50.000 8.71 0.00 31.08 4.02
3508 3577 0.721718 GGAGCGACTCATTTTGTCCG 59.278 55.000 8.71 0.00 31.08 4.79
3509 3578 0.095417 GAGCGACTCATTTTGTCCGC 59.905 55.000 0.00 0.00 35.71 5.54
3510 3579 0.602638 AGCGACTCATTTTGTCCGCA 60.603 50.000 0.00 0.00 36.87 5.69
3511 3580 0.179215 GCGACTCATTTTGTCCGCAG 60.179 55.000 0.00 0.00 35.62 5.18
3512 3581 0.179215 CGACTCATTTTGTCCGCAGC 60.179 55.000 0.00 0.00 0.00 5.25
3513 3582 0.169009 GACTCATTTTGTCCGCAGCC 59.831 55.000 0.00 0.00 0.00 4.85
3514 3583 1.135315 CTCATTTTGTCCGCAGCCG 59.865 57.895 0.00 0.00 0.00 5.52
3515 3584 1.577328 CTCATTTTGTCCGCAGCCGT 61.577 55.000 0.00 0.00 0.00 5.68
3516 3585 1.154225 CATTTTGTCCGCAGCCGTC 60.154 57.895 0.00 0.00 0.00 4.79
3517 3586 2.332654 ATTTTGTCCGCAGCCGTCC 61.333 57.895 0.00 0.00 0.00 4.79
3522 3591 4.612412 TCCGCAGCCGTCCGTTTT 62.612 61.111 0.00 0.00 0.00 2.43
3523 3592 4.383602 CCGCAGCCGTCCGTTTTG 62.384 66.667 0.00 0.00 0.00 2.44
3524 3593 4.383602 CGCAGCCGTCCGTTTTGG 62.384 66.667 0.00 0.00 40.09 3.28
3525 3594 4.038080 GCAGCCGTCCGTTTTGGG 62.038 66.667 0.00 0.00 38.76 4.12
3526 3595 2.593436 CAGCCGTCCGTTTTGGGT 60.593 61.111 0.00 0.00 38.76 4.51
3527 3596 2.190841 CAGCCGTCCGTTTTGGGTT 61.191 57.895 0.00 0.00 38.76 4.11
3528 3597 2.190841 AGCCGTCCGTTTTGGGTTG 61.191 57.895 0.00 0.00 38.76 3.77
3529 3598 3.035727 CCGTCCGTTTTGGGTTGG 58.964 61.111 0.00 0.00 38.76 3.77
3530 3599 2.333581 CGTCCGTTTTGGGTTGGC 59.666 61.111 0.00 0.00 38.76 4.52
3531 3600 2.333581 GTCCGTTTTGGGTTGGCG 59.666 61.111 0.00 0.00 38.76 5.69
3532 3601 3.597728 TCCGTTTTGGGTTGGCGC 61.598 61.111 0.00 0.00 38.76 6.53
3533 3602 4.992294 CCGTTTTGGGTTGGCGCG 62.992 66.667 0.00 0.00 0.00 6.86
3534 3603 4.992294 CGTTTTGGGTTGGCGCGG 62.992 66.667 8.83 0.00 0.00 6.46
3535 3604 3.597728 GTTTTGGGTTGGCGCGGA 61.598 61.111 8.83 0.00 0.00 5.54
3536 3605 3.597728 TTTTGGGTTGGCGCGGAC 61.598 61.111 8.83 1.66 0.00 4.79
3537 3606 4.877619 TTTGGGTTGGCGCGGACA 62.878 61.111 8.83 0.00 0.00 4.02
3538 3607 4.877619 TTGGGTTGGCGCGGACAA 62.878 61.111 8.83 0.00 0.00 3.18
3539 3608 4.877619 TGGGTTGGCGCGGACAAA 62.878 61.111 8.83 0.00 29.78 2.83
3540 3609 3.597728 GGGTTGGCGCGGACAAAA 61.598 61.111 8.83 0.00 29.78 2.44
3541 3610 2.413765 GGTTGGCGCGGACAAAAA 59.586 55.556 8.83 0.00 29.78 1.94
3555 3624 4.293648 AAAAAGCCGGCCCAACGC 62.294 61.111 26.15 0.00 0.00 4.84
3564 3633 4.752879 GCCCAACGCGCTGACCTA 62.753 66.667 11.83 0.00 0.00 3.08
3565 3634 2.047655 CCCAACGCGCTGACCTAA 60.048 61.111 11.83 0.00 0.00 2.69
3566 3635 1.669760 CCCAACGCGCTGACCTAAA 60.670 57.895 11.83 0.00 0.00 1.85
3567 3636 1.495951 CCAACGCGCTGACCTAAAC 59.504 57.895 11.83 0.00 0.00 2.01
3568 3637 1.129809 CAACGCGCTGACCTAAACG 59.870 57.895 5.73 0.00 0.00 3.60
3569 3638 1.007038 AACGCGCTGACCTAAACGA 60.007 52.632 5.73 0.00 0.00 3.85
3570 3639 0.598158 AACGCGCTGACCTAAACGAA 60.598 50.000 5.73 0.00 0.00 3.85
3571 3640 1.280206 ACGCGCTGACCTAAACGAAC 61.280 55.000 5.73 0.00 0.00 3.95
3572 3641 1.414897 GCGCTGACCTAAACGAACG 59.585 57.895 0.00 0.00 0.00 3.95
3573 3642 1.414897 CGCTGACCTAAACGAACGC 59.585 57.895 0.00 0.00 0.00 4.84
3574 3643 1.414897 GCTGACCTAAACGAACGCG 59.585 57.895 3.53 3.53 44.79 6.01
3590 3659 4.853507 CGTGTCCGCTTTCGTCTA 57.146 55.556 0.00 0.00 0.00 2.59
3591 3660 2.346884 CGTGTCCGCTTTCGTCTAC 58.653 57.895 0.00 0.00 0.00 2.59
3592 3661 1.069378 CGTGTCCGCTTTCGTCTACC 61.069 60.000 0.00 0.00 0.00 3.18
3593 3662 0.243095 GTGTCCGCTTTCGTCTACCT 59.757 55.000 0.00 0.00 0.00 3.08
3594 3663 0.242825 TGTCCGCTTTCGTCTACCTG 59.757 55.000 0.00 0.00 0.00 4.00
3595 3664 1.077089 GTCCGCTTTCGTCTACCTGC 61.077 60.000 0.00 0.00 0.00 4.85
3596 3665 1.810030 CCGCTTTCGTCTACCTGCC 60.810 63.158 0.00 0.00 0.00 4.85
3597 3666 2.158959 CGCTTTCGTCTACCTGCCG 61.159 63.158 0.00 0.00 0.00 5.69
3598 3667 1.214589 GCTTTCGTCTACCTGCCGA 59.785 57.895 0.00 0.00 0.00 5.54
3599 3668 1.077089 GCTTTCGTCTACCTGCCGAC 61.077 60.000 0.00 0.00 0.00 4.79
3600 3669 0.458025 CTTTCGTCTACCTGCCGACC 60.458 60.000 0.00 0.00 0.00 4.79
3601 3670 1.880819 TTTCGTCTACCTGCCGACCC 61.881 60.000 0.00 0.00 0.00 4.46
3602 3671 3.066190 CGTCTACCTGCCGACCCA 61.066 66.667 0.00 0.00 0.00 4.51
3603 3672 2.423898 CGTCTACCTGCCGACCCAT 61.424 63.158 0.00 0.00 0.00 4.00
3604 3673 1.905512 GTCTACCTGCCGACCCATT 59.094 57.895 0.00 0.00 0.00 3.16
3605 3674 0.252197 GTCTACCTGCCGACCCATTT 59.748 55.000 0.00 0.00 0.00 2.32
3606 3675 0.539986 TCTACCTGCCGACCCATTTC 59.460 55.000 0.00 0.00 0.00 2.17
3607 3676 0.463833 CTACCTGCCGACCCATTTCC 60.464 60.000 0.00 0.00 0.00 3.13
3608 3677 1.202099 TACCTGCCGACCCATTTCCA 61.202 55.000 0.00 0.00 0.00 3.53
3609 3678 1.750399 CCTGCCGACCCATTTCCAG 60.750 63.158 0.00 0.00 0.00 3.86
3610 3679 1.002134 CTGCCGACCCATTTCCAGT 60.002 57.895 0.00 0.00 0.00 4.00
3611 3680 1.002624 TGCCGACCCATTTCCAGTC 60.003 57.895 0.00 0.00 0.00 3.51
3612 3681 1.749258 GCCGACCCATTTCCAGTCC 60.749 63.158 0.00 0.00 0.00 3.85
3613 3682 1.682849 CCGACCCATTTCCAGTCCA 59.317 57.895 0.00 0.00 0.00 4.02
3614 3683 0.255890 CCGACCCATTTCCAGTCCAT 59.744 55.000 0.00 0.00 0.00 3.41
3615 3684 1.340991 CCGACCCATTTCCAGTCCATT 60.341 52.381 0.00 0.00 0.00 3.16
3616 3685 2.446435 CGACCCATTTCCAGTCCATTT 58.554 47.619 0.00 0.00 0.00 2.32
3617 3686 2.825532 CGACCCATTTCCAGTCCATTTT 59.174 45.455 0.00 0.00 0.00 1.82
3618 3687 3.258123 CGACCCATTTCCAGTCCATTTTT 59.742 43.478 0.00 0.00 0.00 1.94
3636 3705 3.296322 TTTTAGGCTGATTTGCGTTGG 57.704 42.857 0.00 0.00 32.99 3.77
3637 3706 0.525761 TTAGGCTGATTTGCGTTGGC 59.474 50.000 0.00 0.00 40.52 4.52
3638 3707 1.643868 TAGGCTGATTTGCGTTGGCG 61.644 55.000 0.00 0.00 44.10 5.69
3648 3717 4.368808 CGTTGGCGCGGACACAAG 62.369 66.667 8.83 0.00 0.00 3.16
3649 3718 2.970324 GTTGGCGCGGACACAAGA 60.970 61.111 8.83 0.00 0.00 3.02
3650 3719 2.970324 TTGGCGCGGACACAAGAC 60.970 61.111 8.83 0.00 0.00 3.01
3654 3723 3.103911 CGCGGACACAAGACGGAC 61.104 66.667 0.00 0.00 0.00 4.79
3655 3724 3.103911 GCGGACACAAGACGGACG 61.104 66.667 0.00 0.00 0.00 4.79
3656 3725 3.103911 CGGACACAAGACGGACGC 61.104 66.667 0.00 0.00 0.00 5.19
3657 3726 3.103911 GGACACAAGACGGACGCG 61.104 66.667 3.53 3.53 0.00 6.01
3658 3727 3.764049 GACACAAGACGGACGCGC 61.764 66.667 5.73 0.00 0.00 6.86
3678 3747 4.459089 GCGCTCGCCCTCTTTCCT 62.459 66.667 0.00 0.00 34.56 3.36
3679 3748 2.202810 CGCTCGCCCTCTTTCCTC 60.203 66.667 0.00 0.00 0.00 3.71
3680 3749 2.982130 GCTCGCCCTCTTTCCTCA 59.018 61.111 0.00 0.00 0.00 3.86
3681 3750 1.448717 GCTCGCCCTCTTTCCTCAC 60.449 63.158 0.00 0.00 0.00 3.51
3682 3751 1.219393 CTCGCCCTCTTTCCTCACC 59.781 63.158 0.00 0.00 0.00 4.02
3683 3752 2.125512 CGCCCTCTTTCCTCACCG 60.126 66.667 0.00 0.00 0.00 4.94
3684 3753 2.269241 GCCCTCTTTCCTCACCGG 59.731 66.667 0.00 0.00 0.00 5.28
3685 3754 2.269241 CCCTCTTTCCTCACCGGC 59.731 66.667 0.00 0.00 0.00 6.13
3686 3755 2.269241 CCTCTTTCCTCACCGGCC 59.731 66.667 0.00 0.00 0.00 6.13
3687 3756 2.269241 CTCTTTCCTCACCGGCCC 59.731 66.667 0.00 0.00 0.00 5.80
3688 3757 3.327404 TCTTTCCTCACCGGCCCC 61.327 66.667 0.00 0.00 0.00 5.80
3689 3758 4.778143 CTTTCCTCACCGGCCCCG 62.778 72.222 0.00 0.00 39.44 5.73
3705 3774 2.184322 CGCTAGTCGGTGGCACAT 59.816 61.111 20.82 4.57 44.52 3.21
3706 3775 1.447838 CGCTAGTCGGTGGCACATT 60.448 57.895 20.82 3.88 44.52 2.71
3707 3776 1.695893 CGCTAGTCGGTGGCACATTG 61.696 60.000 20.82 8.68 44.52 2.82
3708 3777 1.369091 GCTAGTCGGTGGCACATTGG 61.369 60.000 20.82 5.45 44.52 3.16
3709 3778 0.249120 CTAGTCGGTGGCACATTGGA 59.751 55.000 20.82 7.84 44.52 3.53
3710 3779 0.908910 TAGTCGGTGGCACATTGGAT 59.091 50.000 20.82 2.35 44.52 3.41
3711 3780 0.038166 AGTCGGTGGCACATTGGATT 59.962 50.000 20.82 4.83 44.52 3.01
3712 3781 0.451783 GTCGGTGGCACATTGGATTC 59.548 55.000 20.82 0.00 44.52 2.52
3713 3782 0.037447 TCGGTGGCACATTGGATTCA 59.963 50.000 20.82 0.00 44.52 2.57
3714 3783 0.171007 CGGTGGCACATTGGATTCAC 59.829 55.000 20.82 0.00 44.52 3.18
3715 3784 1.255882 GGTGGCACATTGGATTCACA 58.744 50.000 20.82 0.00 44.52 3.58
3716 3785 1.067635 GGTGGCACATTGGATTCACAC 60.068 52.381 20.82 0.00 44.52 3.82
3717 3786 1.612950 GTGGCACATTGGATTCACACA 59.387 47.619 13.86 0.00 44.52 3.72
3718 3787 1.612950 TGGCACATTGGATTCACACAC 59.387 47.619 0.00 0.00 0.00 3.82
3719 3788 1.888512 GGCACATTGGATTCACACACT 59.111 47.619 0.00 0.00 0.00 3.55
3720 3789 2.095059 GGCACATTGGATTCACACACTC 60.095 50.000 0.00 0.00 0.00 3.51
3721 3790 2.413239 GCACATTGGATTCACACACTCG 60.413 50.000 0.00 0.00 0.00 4.18
3722 3791 1.806542 ACATTGGATTCACACACTCGC 59.193 47.619 0.00 0.00 0.00 5.03
3723 3792 1.131126 CATTGGATTCACACACTCGCC 59.869 52.381 0.00 0.00 0.00 5.54
3724 3793 0.605319 TTGGATTCACACACTCGCCC 60.605 55.000 0.00 0.00 0.00 6.13
3725 3794 2.100631 GGATTCACACACTCGCCCG 61.101 63.158 0.00 0.00 0.00 6.13
3726 3795 2.740714 GATTCACACACTCGCCCGC 61.741 63.158 0.00 0.00 0.00 6.13
3727 3796 4.980805 TTCACACACTCGCCCGCC 62.981 66.667 0.00 0.00 0.00 6.13
3742 3811 4.570663 GCCTGCTACGTCGCCGAT 62.571 66.667 9.82 0.00 37.88 4.18
3743 3812 2.655364 CCTGCTACGTCGCCGATG 60.655 66.667 9.82 4.46 37.88 3.84
3744 3813 3.323136 CTGCTACGTCGCCGATGC 61.323 66.667 9.82 2.01 37.88 3.91
3745 3814 4.865761 TGCTACGTCGCCGATGCC 62.866 66.667 9.82 0.00 37.88 4.40
3746 3815 4.865761 GCTACGTCGCCGATGCCA 62.866 66.667 6.17 0.00 37.88 4.92
3747 3816 2.954868 CTACGTCGCCGATGCCAC 60.955 66.667 6.17 0.00 37.88 5.01
3748 3817 4.501714 TACGTCGCCGATGCCACC 62.502 66.667 6.17 0.00 37.88 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 8.947055 TTTACTCACTTACGGTTAAAAGAAGT 57.053 30.769 0.00 2.98 0.00 3.01
2 3 9.807386 CATTTACTCACTTACGGTTAAAAGAAG 57.193 33.333 0.00 0.00 0.00 2.85
3 4 9.328845 ACATTTACTCACTTACGGTTAAAAGAA 57.671 29.630 0.00 0.00 0.00 2.52
4 5 8.891671 ACATTTACTCACTTACGGTTAAAAGA 57.108 30.769 0.00 0.00 0.00 2.52
5 6 9.377383 CAACATTTACTCACTTACGGTTAAAAG 57.623 33.333 0.00 0.00 0.00 2.27
6 7 9.107177 TCAACATTTACTCACTTACGGTTAAAA 57.893 29.630 0.00 0.00 0.00 1.52
7 8 8.659925 TCAACATTTACTCACTTACGGTTAAA 57.340 30.769 0.00 0.00 0.00 1.52
8 9 8.659925 TTCAACATTTACTCACTTACGGTTAA 57.340 30.769 0.00 0.00 0.00 2.01
9 10 8.836268 ATTCAACATTTACTCACTTACGGTTA 57.164 30.769 0.00 0.00 0.00 2.85
10 11 7.739498 ATTCAACATTTACTCACTTACGGTT 57.261 32.000 0.00 0.00 0.00 4.44
11 12 7.739498 AATTCAACATTTACTCACTTACGGT 57.261 32.000 0.00 0.00 0.00 4.83
12 13 8.714179 TGTAATTCAACATTTACTCACTTACGG 58.286 33.333 0.00 0.00 31.16 4.02
28 29 9.550811 CCCTAACGTTATCTTTTGTAATTCAAC 57.449 33.333 8.76 0.00 35.61 3.18
29 30 8.732531 CCCCTAACGTTATCTTTTGTAATTCAA 58.267 33.333 8.76 0.00 0.00 2.69
30 31 7.148205 GCCCCTAACGTTATCTTTTGTAATTCA 60.148 37.037 8.76 0.00 0.00 2.57
31 32 7.191551 GCCCCTAACGTTATCTTTTGTAATTC 58.808 38.462 8.76 0.00 0.00 2.17
32 33 6.095860 GGCCCCTAACGTTATCTTTTGTAATT 59.904 38.462 8.76 0.00 0.00 1.40
33 34 5.591472 GGCCCCTAACGTTATCTTTTGTAAT 59.409 40.000 8.76 0.00 0.00 1.89
34 35 4.943093 GGCCCCTAACGTTATCTTTTGTAA 59.057 41.667 8.76 0.00 0.00 2.41
35 36 4.019501 TGGCCCCTAACGTTATCTTTTGTA 60.020 41.667 8.76 0.00 0.00 2.41
36 37 3.244981 TGGCCCCTAACGTTATCTTTTGT 60.245 43.478 8.76 0.00 0.00 2.83
37 38 3.349022 TGGCCCCTAACGTTATCTTTTG 58.651 45.455 8.76 0.00 0.00 2.44
38 39 3.009805 ACTGGCCCCTAACGTTATCTTTT 59.990 43.478 8.76 0.00 0.00 2.27
39 40 2.574824 ACTGGCCCCTAACGTTATCTTT 59.425 45.455 8.76 0.00 0.00 2.52
40 41 2.193993 ACTGGCCCCTAACGTTATCTT 58.806 47.619 8.76 0.00 0.00 2.40
41 42 1.875488 ACTGGCCCCTAACGTTATCT 58.125 50.000 8.76 0.00 0.00 1.98
42 43 2.169978 AGAACTGGCCCCTAACGTTATC 59.830 50.000 8.76 0.12 0.00 1.75
43 44 2.193993 AGAACTGGCCCCTAACGTTAT 58.806 47.619 8.76 0.00 0.00 1.89
44 45 1.648116 AGAACTGGCCCCTAACGTTA 58.352 50.000 7.94 7.94 0.00 3.18
45 46 0.769247 AAGAACTGGCCCCTAACGTT 59.231 50.000 5.88 5.88 0.00 3.99
46 47 0.769247 AAAGAACTGGCCCCTAACGT 59.231 50.000 0.00 0.00 0.00 3.99
47 48 1.539827 CAAAAGAACTGGCCCCTAACG 59.460 52.381 0.00 0.00 0.00 3.18
48 49 1.893137 CCAAAAGAACTGGCCCCTAAC 59.107 52.381 0.00 0.00 0.00 2.34
49 50 1.501604 ACCAAAAGAACTGGCCCCTAA 59.498 47.619 0.00 0.00 37.48 2.69
50 51 1.154430 ACCAAAAGAACTGGCCCCTA 58.846 50.000 0.00 0.00 37.48 3.53
51 52 1.075536 CTACCAAAAGAACTGGCCCCT 59.924 52.381 0.00 0.00 37.48 4.79
52 53 1.545841 CTACCAAAAGAACTGGCCCC 58.454 55.000 0.00 0.00 37.48 5.80
53 54 0.888619 GCTACCAAAAGAACTGGCCC 59.111 55.000 0.00 0.00 37.48 5.80
54 55 1.911057 AGCTACCAAAAGAACTGGCC 58.089 50.000 0.00 0.00 37.48 5.36
55 56 5.447624 TTTAAGCTACCAAAAGAACTGGC 57.552 39.130 0.00 0.00 37.48 4.85
56 57 7.272037 TCTTTTAAGCTACCAAAAGAACTGG 57.728 36.000 20.19 0.00 43.95 4.00
62 63 6.967199 CGGCTTATCTTTTAAGCTACCAAAAG 59.033 38.462 16.41 16.41 46.58 2.27
63 64 6.624204 GCGGCTTATCTTTTAAGCTACCAAAA 60.624 38.462 14.86 0.00 46.58 2.44
64 65 5.163693 GCGGCTTATCTTTTAAGCTACCAAA 60.164 40.000 14.86 0.00 46.58 3.28
65 66 4.334481 GCGGCTTATCTTTTAAGCTACCAA 59.666 41.667 14.86 0.00 46.58 3.67
66 67 3.875134 GCGGCTTATCTTTTAAGCTACCA 59.125 43.478 14.86 0.00 46.58 3.25
67 68 3.250280 GGCGGCTTATCTTTTAAGCTACC 59.750 47.826 14.86 12.71 46.58 3.18
68 69 4.127907 AGGCGGCTTATCTTTTAAGCTAC 58.872 43.478 5.25 8.65 46.58 3.58
69 70 4.417426 AGGCGGCTTATCTTTTAAGCTA 57.583 40.909 5.25 0.00 46.58 3.32
70 71 3.283259 AGGCGGCTTATCTTTTAAGCT 57.717 42.857 5.25 0.00 46.58 3.74
71 72 3.628032 AGAAGGCGGCTTATCTTTTAAGC 59.372 43.478 25.59 7.90 46.64 3.09
72 73 5.220873 GGAAGAAGGCGGCTTATCTTTTAAG 60.221 44.000 25.59 0.00 32.54 1.85
73 74 4.638865 GGAAGAAGGCGGCTTATCTTTTAA 59.361 41.667 25.59 0.00 32.54 1.52
74 75 4.196971 GGAAGAAGGCGGCTTATCTTTTA 58.803 43.478 25.59 0.00 32.54 1.52
75 76 3.017442 GGAAGAAGGCGGCTTATCTTTT 58.983 45.455 25.59 13.41 32.54 2.27
76 77 2.644676 GGAAGAAGGCGGCTTATCTTT 58.355 47.619 25.59 15.81 32.54 2.52
77 78 1.134068 GGGAAGAAGGCGGCTTATCTT 60.134 52.381 25.59 23.46 34.96 2.40
78 79 0.470341 GGGAAGAAGGCGGCTTATCT 59.530 55.000 25.59 15.95 0.00 1.98
79 80 0.180406 TGGGAAGAAGGCGGCTTATC 59.820 55.000 25.59 23.27 0.00 1.75
80 81 0.181350 CTGGGAAGAAGGCGGCTTAT 59.819 55.000 25.59 19.71 0.00 1.73
81 82 1.602237 CTGGGAAGAAGGCGGCTTA 59.398 57.895 25.59 6.84 0.00 3.09
82 83 2.352805 CTGGGAAGAAGGCGGCTT 59.647 61.111 25.83 25.83 0.00 4.35
83 84 4.416738 GCTGGGAAGAAGGCGGCT 62.417 66.667 5.25 5.25 0.00 5.52
84 85 3.927481 AAGCTGGGAAGAAGGCGGC 62.927 63.158 0.00 0.00 0.00 6.53
85 86 0.895559 AAAAGCTGGGAAGAAGGCGG 60.896 55.000 0.00 0.00 0.00 6.13
86 87 0.961753 AAAAAGCTGGGAAGAAGGCG 59.038 50.000 0.00 0.00 0.00 5.52
108 109 1.519408 TTTGTTGAGAGGCGGCTTAC 58.481 50.000 14.76 11.12 0.00 2.34
109 110 2.264005 TTTTGTTGAGAGGCGGCTTA 57.736 45.000 14.76 0.00 0.00 3.09
110 111 1.620822 ATTTTGTTGAGAGGCGGCTT 58.379 45.000 14.76 2.75 0.00 4.35
111 112 1.620822 AATTTTGTTGAGAGGCGGCT 58.379 45.000 13.09 13.09 0.00 5.52
112 113 2.288152 TGAAATTTTGTTGAGAGGCGGC 60.288 45.455 0.00 0.00 0.00 6.53
113 114 3.253188 TCTGAAATTTTGTTGAGAGGCGG 59.747 43.478 0.00 0.00 0.00 6.13
114 115 4.470462 CTCTGAAATTTTGTTGAGAGGCG 58.530 43.478 0.00 0.00 35.81 5.52
115 116 4.233005 GCTCTGAAATTTTGTTGAGAGGC 58.767 43.478 11.93 0.00 38.75 4.70
116 117 4.470462 CGCTCTGAAATTTTGTTGAGAGG 58.530 43.478 11.93 3.33 38.75 3.69
117 118 4.470462 CCGCTCTGAAATTTTGTTGAGAG 58.530 43.478 11.93 0.00 40.59 3.20
118 119 3.304659 GCCGCTCTGAAATTTTGTTGAGA 60.305 43.478 11.93 0.00 0.00 3.27
119 120 2.982470 GCCGCTCTGAAATTTTGTTGAG 59.018 45.455 0.00 0.00 0.00 3.02
120 121 2.622942 AGCCGCTCTGAAATTTTGTTGA 59.377 40.909 0.00 0.00 0.00 3.18
121 122 3.017265 AGCCGCTCTGAAATTTTGTTG 57.983 42.857 0.00 0.00 0.00 3.33
122 123 3.733443 AAGCCGCTCTGAAATTTTGTT 57.267 38.095 0.00 0.00 0.00 2.83
123 124 5.391312 AATAAGCCGCTCTGAAATTTTGT 57.609 34.783 0.00 0.00 0.00 2.83
124 125 6.710692 AAAATAAGCCGCTCTGAAATTTTG 57.289 33.333 0.00 0.00 0.00 2.44
145 146 2.510613 CGCCTCTCCCCAACTTAAAAA 58.489 47.619 0.00 0.00 0.00 1.94
146 147 1.271707 CCGCCTCTCCCCAACTTAAAA 60.272 52.381 0.00 0.00 0.00 1.52
147 148 0.326927 CCGCCTCTCCCCAACTTAAA 59.673 55.000 0.00 0.00 0.00 1.52
148 149 1.988015 CCGCCTCTCCCCAACTTAA 59.012 57.895 0.00 0.00 0.00 1.85
149 150 2.666098 GCCGCCTCTCCCCAACTTA 61.666 63.158 0.00 0.00 0.00 2.24
150 151 4.035102 GCCGCCTCTCCCCAACTT 62.035 66.667 0.00 0.00 0.00 2.66
152 153 1.984288 ATAAGCCGCCTCTCCCCAAC 61.984 60.000 0.00 0.00 0.00 3.77
153 154 1.279025 AATAAGCCGCCTCTCCCCAA 61.279 55.000 0.00 0.00 0.00 4.12
154 155 1.279025 AAATAAGCCGCCTCTCCCCA 61.279 55.000 0.00 0.00 0.00 4.96
155 156 0.106669 AAAATAAGCCGCCTCTCCCC 60.107 55.000 0.00 0.00 0.00 4.81
156 157 1.763968 AAAAATAAGCCGCCTCTCCC 58.236 50.000 0.00 0.00 0.00 4.30
172 173 3.821421 TTTCTTTGGGCGGCTTAAAAA 57.179 38.095 9.56 4.38 0.00 1.94
173 174 3.322254 TCATTTCTTTGGGCGGCTTAAAA 59.678 39.130 9.56 6.88 0.00 1.52
174 175 2.894126 TCATTTCTTTGGGCGGCTTAAA 59.106 40.909 9.56 10.10 0.00 1.52
175 176 2.520069 TCATTTCTTTGGGCGGCTTAA 58.480 42.857 9.56 1.63 0.00 1.85
176 177 2.208132 TCATTTCTTTGGGCGGCTTA 57.792 45.000 9.56 0.00 0.00 3.09
177 178 1.478105 GATCATTTCTTTGGGCGGCTT 59.522 47.619 9.56 0.00 0.00 4.35
178 179 1.106285 GATCATTTCTTTGGGCGGCT 58.894 50.000 9.56 0.00 0.00 5.52
179 180 1.106285 AGATCATTTCTTTGGGCGGC 58.894 50.000 0.00 0.00 0.00 6.53
180 181 3.808728 TCTAGATCATTTCTTTGGGCGG 58.191 45.455 0.00 0.00 35.79 6.13
181 182 4.818546 ACATCTAGATCATTTCTTTGGGCG 59.181 41.667 1.03 0.00 35.79 6.13
182 183 7.220030 TCTACATCTAGATCATTTCTTTGGGC 58.780 38.462 1.03 0.00 35.79 5.36
183 184 9.618890 TTTCTACATCTAGATCATTTCTTTGGG 57.381 33.333 1.03 0.00 35.79 4.12
189 190 8.930760 CGGGAATTTCTACATCTAGATCATTTC 58.069 37.037 1.03 0.40 0.00 2.17
190 191 7.389053 GCGGGAATTTCTACATCTAGATCATTT 59.611 37.037 1.03 0.00 0.00 2.32
191 192 6.876257 GCGGGAATTTCTACATCTAGATCATT 59.124 38.462 1.03 0.00 0.00 2.57
192 193 6.014242 TGCGGGAATTTCTACATCTAGATCAT 60.014 38.462 1.03 0.00 0.00 2.45
193 194 5.304357 TGCGGGAATTTCTACATCTAGATCA 59.696 40.000 1.03 0.00 0.00 2.92
194 195 5.784177 TGCGGGAATTTCTACATCTAGATC 58.216 41.667 1.03 0.00 0.00 2.75
195 196 5.808366 TGCGGGAATTTCTACATCTAGAT 57.192 39.130 0.00 0.00 0.00 1.98
196 197 5.607939 TTGCGGGAATTTCTACATCTAGA 57.392 39.130 0.00 0.00 0.00 2.43
197 198 6.049149 TCTTTGCGGGAATTTCTACATCTAG 58.951 40.000 0.00 0.00 0.00 2.43
198 199 5.984725 TCTTTGCGGGAATTTCTACATCTA 58.015 37.500 0.00 0.00 0.00 1.98
199 200 4.843728 TCTTTGCGGGAATTTCTACATCT 58.156 39.130 0.00 0.00 0.00 2.90
200 201 5.560966 TTCTTTGCGGGAATTTCTACATC 57.439 39.130 0.00 0.00 0.00 3.06
201 202 5.975693 TTTCTTTGCGGGAATTTCTACAT 57.024 34.783 0.00 0.00 0.00 2.29
202 203 5.776173 TTTTCTTTGCGGGAATTTCTACA 57.224 34.783 0.00 0.00 0.00 2.74
269 272 5.358725 ACCGTTTGTATTGGTGAACTTTTCT 59.641 36.000 0.00 0.00 33.91 2.52
278 281 3.493877 TCGTTGTACCGTTTGTATTGGTG 59.506 43.478 0.00 0.00 37.20 4.17
287 290 3.941035 CGGCTCGTTGTACCGTTT 58.059 55.556 0.00 0.00 42.01 3.60
461 464 0.680280 TAGGAGCTCCGGTCAGTGAC 60.680 60.000 26.95 15.24 42.08 3.67
528 533 3.820557 CCGTGGGATTACCTCAATCAAT 58.179 45.455 0.00 0.00 44.27 2.57
577 582 2.042843 GGAGAGGGGAAGCGAGGA 60.043 66.667 0.00 0.00 0.00 3.71
579 584 3.157949 GGGGAGAGGGGAAGCGAG 61.158 72.222 0.00 0.00 0.00 5.03
580 585 3.680920 GAGGGGAGAGGGGAAGCGA 62.681 68.421 0.00 0.00 0.00 4.93
581 586 3.157949 GAGGGGAGAGGGGAAGCG 61.158 72.222 0.00 0.00 0.00 4.68
582 587 1.764454 GAGAGGGGAGAGGGGAAGC 60.764 68.421 0.00 0.00 0.00 3.86
583 588 1.074850 GGAGAGGGGAGAGGGGAAG 60.075 68.421 0.00 0.00 0.00 3.46
586 591 4.179599 GGGGAGAGGGGAGAGGGG 62.180 77.778 0.00 0.00 0.00 4.79
587 592 3.039526 AGGGGAGAGGGGAGAGGG 61.040 72.222 0.00 0.00 0.00 4.30
588 593 1.891296 TTGAGGGGAGAGGGGAGAGG 61.891 65.000 0.00 0.00 0.00 3.69
589 594 0.689412 GTTGAGGGGAGAGGGGAGAG 60.689 65.000 0.00 0.00 0.00 3.20
590 595 1.392534 GTTGAGGGGAGAGGGGAGA 59.607 63.158 0.00 0.00 0.00 3.71
591 596 1.690985 GGTTGAGGGGAGAGGGGAG 60.691 68.421 0.00 0.00 0.00 4.30
592 597 2.454941 GGTTGAGGGGAGAGGGGA 59.545 66.667 0.00 0.00 0.00 4.81
593 598 1.997874 CTGGTTGAGGGGAGAGGGG 60.998 68.421 0.00 0.00 0.00 4.79
678 684 1.211456 CTCTCAAGGCCCCAAGATCT 58.789 55.000 0.00 0.00 0.00 2.75
721 727 0.680061 GCCCGATCGAACCCTAGAAT 59.320 55.000 18.66 0.00 0.00 2.40
861 869 3.341823 CACCTGCACAAGAATTAGAGCT 58.658 45.455 0.00 0.00 0.00 4.09
967 980 5.357878 ACAGGCCAACAGAATATACACAATG 59.642 40.000 5.01 0.00 0.00 2.82
1039 1052 1.753073 GCAGGGTTTCATCATCCAAGG 59.247 52.381 0.00 0.00 0.00 3.61
1060 1073 4.281182 AGTCTTTGACACCTCATTACTCGT 59.719 41.667 0.46 0.00 34.60 4.18
1107 1120 3.321950 CCCTGACCCCTTATCAGATTCT 58.678 50.000 3.58 0.00 45.46 2.40
1122 1135 1.552792 GCCTGATATAGAGCCCCTGAC 59.447 57.143 0.00 0.00 0.00 3.51
1194 1207 4.748679 CGCTGCAACGCCTTCAGC 62.749 66.667 0.00 8.81 46.98 4.26
1227 1240 0.326264 TGCTCTTTCTCCTGGGCTTC 59.674 55.000 0.00 0.00 0.00 3.86
1231 1244 0.987294 TCCTTGCTCTTTCTCCTGGG 59.013 55.000 0.00 0.00 0.00 4.45
1269 1282 6.968131 TTCTCGATTTCGTCAAATTCATCT 57.032 33.333 0.00 0.00 40.80 2.90
1280 1293 9.199982 TCTTACAAGTTATTTTCTCGATTTCGT 57.800 29.630 0.00 0.00 40.80 3.85
1353 1366 1.524002 CACATCCTCCAGCATCCGT 59.476 57.895 0.00 0.00 0.00 4.69
1712 1725 9.797556 ACCTGAAGACAAGTAAAATAACAAAAC 57.202 29.630 0.00 0.00 0.00 2.43
1720 1733 7.122055 TGTGTCAAACCTGAAGACAAGTAAAAT 59.878 33.333 0.00 0.00 43.16 1.82
1785 1799 6.174720 TCAGTGAAGTAATGAACAGGAACT 57.825 37.500 0.00 0.00 30.48 3.01
1816 1830 2.378038 TGGGAAGCACTGCATAATTCC 58.622 47.619 10.11 10.11 38.96 3.01
1844 1858 3.832276 TGCGTCAATCAACAATAAAGCC 58.168 40.909 0.00 0.00 0.00 4.35
1977 1993 1.135094 AAGCCAGATCGGTCCATGAT 58.865 50.000 0.00 0.00 36.97 2.45
2007 2023 9.317936 CTCTTGAGAGTTGCATGTACAAATATA 57.682 33.333 0.00 0.00 37.40 0.86
2016 2032 3.758755 TGTCTCTTGAGAGTTGCATGT 57.241 42.857 7.82 0.00 42.60 3.21
2045 2061 3.882888 CTGAAAAGAGTTTGCCTACACCA 59.117 43.478 0.00 0.00 0.00 4.17
2098 2118 8.894768 AACAAGTCTCCTATTATCATGCTTAC 57.105 34.615 0.00 0.00 0.00 2.34
2121 2177 6.105333 AGAAGATGTCATTAGCACTCAGAAC 58.895 40.000 0.00 0.00 0.00 3.01
2173 2229 9.965824 AAGTTGGTAAATTATTTTCTGTCACAG 57.034 29.630 0.00 0.00 0.00 3.66
2178 2234 8.974408 GCGAAAAGTTGGTAAATTATTTTCTGT 58.026 29.630 0.00 0.00 35.52 3.41
2430 2488 4.829064 TTGTTGACCAAGTGCTTGATAC 57.171 40.909 12.99 6.24 42.93 2.24
2544 2602 3.749088 GTCATTTTGATACGTGGTGGACA 59.251 43.478 0.00 0.00 0.00 4.02
2553 2611 3.621268 ACATCACCGGTCATTTTGATACG 59.379 43.478 2.59 0.00 32.16 3.06
2624 2682 4.363138 GTTTATTTTCATAGGCTGCAGGC 58.637 43.478 31.58 31.58 41.43 4.85
2663 2721 1.343465 AGATTCACGTTCACGGTCCTT 59.657 47.619 4.07 0.00 44.95 3.36
2816 2874 1.227380 AGGCTGCTAGCGTATGCAC 60.227 57.895 10.77 6.29 43.62 4.57
2824 2882 2.621517 AATGCTCCCAGGCTGCTAGC 62.622 60.000 24.30 24.30 41.46 3.42
2896 2955 2.311701 CGTGGACTAAAACGCCGCA 61.312 57.895 0.00 0.00 32.40 5.69
2928 2995 4.694037 AGCGACTTGTTATCCTACCAAAAC 59.306 41.667 0.00 0.00 0.00 2.43
2943 3010 5.005682 CCAAAAGGAAAAGAAAAGCGACTTG 59.994 40.000 0.00 0.00 0.00 3.16
2994 3061 0.549950 CCGGGACAGAGGGAGTACTA 59.450 60.000 0.00 0.00 0.00 1.82
2999 3066 2.016905 ATATTCCGGGACAGAGGGAG 57.983 55.000 0.00 0.00 0.00 4.30
3001 3068 3.507411 TCTTATATTCCGGGACAGAGGG 58.493 50.000 0.00 0.00 0.00 4.30
3002 3069 4.558898 CGTTCTTATATTCCGGGACAGAGG 60.559 50.000 0.00 0.00 0.00 3.69
3003 3070 4.037684 ACGTTCTTATATTCCGGGACAGAG 59.962 45.833 0.00 0.00 0.00 3.35
3004 3071 3.956199 ACGTTCTTATATTCCGGGACAGA 59.044 43.478 0.00 0.00 0.00 3.41
3005 3072 4.317671 ACGTTCTTATATTCCGGGACAG 57.682 45.455 0.00 0.00 0.00 3.51
3006 3073 4.741321 AACGTTCTTATATTCCGGGACA 57.259 40.909 0.00 0.00 0.00 4.02
3007 3074 6.092533 TCAAAAACGTTCTTATATTCCGGGAC 59.907 38.462 0.00 0.00 0.00 4.46
3008 3075 6.092533 GTCAAAAACGTTCTTATATTCCGGGA 59.907 38.462 0.00 0.00 0.00 5.14
3009 3076 6.128227 TGTCAAAAACGTTCTTATATTCCGGG 60.128 38.462 0.00 0.00 0.00 5.73
3010 3077 6.739550 GTGTCAAAAACGTTCTTATATTCCGG 59.260 38.462 0.00 0.00 0.00 5.14
3011 3078 6.739550 GGTGTCAAAAACGTTCTTATATTCCG 59.260 38.462 0.00 0.00 0.00 4.30
3012 3079 7.586747 TGGTGTCAAAAACGTTCTTATATTCC 58.413 34.615 0.00 0.00 0.00 3.01
3013 3080 9.061610 CATGGTGTCAAAAACGTTCTTATATTC 57.938 33.333 0.00 0.00 0.00 1.75
3014 3081 7.540745 GCATGGTGTCAAAAACGTTCTTATATT 59.459 33.333 0.00 0.00 0.00 1.28
3015 3082 7.027161 GCATGGTGTCAAAAACGTTCTTATAT 58.973 34.615 0.00 0.00 0.00 0.86
3016 3083 6.205853 AGCATGGTGTCAAAAACGTTCTTATA 59.794 34.615 0.00 0.00 0.00 0.98
3017 3084 5.009610 AGCATGGTGTCAAAAACGTTCTTAT 59.990 36.000 0.00 0.00 0.00 1.73
3018 3085 4.336993 AGCATGGTGTCAAAAACGTTCTTA 59.663 37.500 0.00 0.00 0.00 2.10
3019 3086 3.130340 AGCATGGTGTCAAAAACGTTCTT 59.870 39.130 0.00 0.00 0.00 2.52
3020 3087 2.687935 AGCATGGTGTCAAAAACGTTCT 59.312 40.909 0.00 0.00 0.00 3.01
3021 3088 3.078594 AGCATGGTGTCAAAAACGTTC 57.921 42.857 0.00 0.00 0.00 3.95
3022 3089 3.630312 ACTAGCATGGTGTCAAAAACGTT 59.370 39.130 7.89 0.00 0.00 3.99
3023 3090 3.003275 CACTAGCATGGTGTCAAAAACGT 59.997 43.478 7.89 0.00 43.23 3.99
3024 3091 3.554524 CACTAGCATGGTGTCAAAAACG 58.445 45.455 7.89 0.00 43.23 3.60
3034 3101 5.529800 AGAACGTTTTTAACACTAGCATGGT 59.470 36.000 0.46 1.62 0.00 3.55
3035 3102 5.997385 AGAACGTTTTTAACACTAGCATGG 58.003 37.500 0.46 0.00 0.00 3.66
3046 3113 9.609950 CGTCCCAAAATATAAGAACGTTTTTAA 57.390 29.630 14.41 5.85 0.00 1.52
3047 3114 8.235905 CCGTCCCAAAATATAAGAACGTTTTTA 58.764 33.333 13.02 13.02 0.00 1.52
3048 3115 7.040548 TCCGTCCCAAAATATAAGAACGTTTTT 60.041 33.333 9.22 9.22 0.00 1.94
3049 3116 6.430616 TCCGTCCCAAAATATAAGAACGTTTT 59.569 34.615 0.46 0.00 0.00 2.43
3050 3117 5.939296 TCCGTCCCAAAATATAAGAACGTTT 59.061 36.000 0.46 0.00 0.00 3.60
3051 3118 5.490159 TCCGTCCCAAAATATAAGAACGTT 58.510 37.500 0.00 0.00 0.00 3.99
3052 3119 5.088680 TCCGTCCCAAAATATAAGAACGT 57.911 39.130 0.00 0.00 0.00 3.99
3053 3120 4.510340 CCTCCGTCCCAAAATATAAGAACG 59.490 45.833 0.00 0.00 0.00 3.95
3054 3121 4.820173 CCCTCCGTCCCAAAATATAAGAAC 59.180 45.833 0.00 0.00 0.00 3.01
3055 3122 4.722781 TCCCTCCGTCCCAAAATATAAGAA 59.277 41.667 0.00 0.00 0.00 2.52
3056 3123 4.300345 TCCCTCCGTCCCAAAATATAAGA 58.700 43.478 0.00 0.00 0.00 2.10
3057 3124 4.102681 ACTCCCTCCGTCCCAAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
3058 3125 4.042174 ACTCCCTCCGTCCCAAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
3059 3126 3.660959 ACTCCCTCCGTCCCAAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
3060 3127 2.488836 ACTCCCTCCGTCCCAAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
3061 3128 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3062 3129 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
3063 3130 1.272807 CTACTCCCTCCGTCCCAAAA 58.727 55.000 0.00 0.00 0.00 2.44
3064 3131 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
3065 3132 1.002069 TACTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
3066 3133 1.002069 TTACTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
3067 3134 1.962100 CATTACTACTCCCTCCGTCCC 59.038 57.143 0.00 0.00 0.00 4.46
3068 3135 2.664015 ACATTACTACTCCCTCCGTCC 58.336 52.381 0.00 0.00 0.00 4.79
3069 3136 3.952967 AGAACATTACTACTCCCTCCGTC 59.047 47.826 0.00 0.00 0.00 4.79
3070 3137 3.978610 AGAACATTACTACTCCCTCCGT 58.021 45.455 0.00 0.00 0.00 4.69
3071 3138 4.683832 CAAGAACATTACTACTCCCTCCG 58.316 47.826 0.00 0.00 0.00 4.63
3072 3139 4.443621 GCAAGAACATTACTACTCCCTCC 58.556 47.826 0.00 0.00 0.00 4.30
3073 3140 4.162509 AGGCAAGAACATTACTACTCCCTC 59.837 45.833 0.00 0.00 0.00 4.30
3074 3141 4.104831 AGGCAAGAACATTACTACTCCCT 58.895 43.478 0.00 0.00 0.00 4.20
3075 3142 4.489306 AGGCAAGAACATTACTACTCCC 57.511 45.455 0.00 0.00 0.00 4.30
3076 3143 5.488341 TGAAGGCAAGAACATTACTACTCC 58.512 41.667 0.00 0.00 0.00 3.85
3115 3182 3.338249 ACAATGACATCACAGGCAGTAC 58.662 45.455 0.00 0.00 0.00 2.73
3127 3195 7.830697 TCATCAAAGGTAAGATGACAATGACAT 59.169 33.333 0.00 0.00 44.04 3.06
3149 3217 5.163814 GCACCTAAACACAGTCAAGATCATC 60.164 44.000 0.00 0.00 0.00 2.92
3172 3240 2.583143 AACCTGTGGTTCTTTACCTGC 58.417 47.619 0.00 0.00 43.05 4.85
3178 3246 3.889538 GGAAGCTAAACCTGTGGTTCTTT 59.110 43.478 2.22 0.00 46.20 2.52
3239 3308 3.748568 GGAACTTCCACTGTAAAGAGCAG 59.251 47.826 2.62 0.00 36.28 4.24
3270 3339 3.080319 GGAAAGGCATCTATCCAGCATC 58.920 50.000 0.00 0.00 32.08 3.91
3271 3340 2.444388 TGGAAAGGCATCTATCCAGCAT 59.556 45.455 0.00 0.00 37.05 3.79
3289 3358 3.367498 CCAAAACCGTCAAAACAACTGGA 60.367 43.478 0.00 0.00 0.00 3.86
3302 3371 2.223711 GCTCAACAATGACCAAAACCGT 60.224 45.455 0.00 0.00 0.00 4.83
3385 3454 7.309377 CCTCACAAAATTTATCTGGAAGCTCAA 60.309 37.037 0.00 0.00 0.00 3.02
3483 3552 2.749076 CAAAATGAGTCGCTCCATTGGA 59.251 45.455 5.05 5.05 0.00 3.53
3484 3553 2.489329 ACAAAATGAGTCGCTCCATTGG 59.511 45.455 0.00 0.00 0.00 3.16
3485 3554 3.426695 GGACAAAATGAGTCGCTCCATTG 60.427 47.826 4.73 8.64 36.87 2.82
3486 3555 2.749621 GGACAAAATGAGTCGCTCCATT 59.250 45.455 4.73 0.00 36.87 3.16
3487 3556 2.359900 GGACAAAATGAGTCGCTCCAT 58.640 47.619 4.73 0.00 36.87 3.41
3488 3557 1.808411 GGACAAAATGAGTCGCTCCA 58.192 50.000 4.73 0.00 36.87 3.86
3489 3558 0.721718 CGGACAAAATGAGTCGCTCC 59.278 55.000 4.73 0.00 36.87 4.70
3490 3559 0.095417 GCGGACAAAATGAGTCGCTC 59.905 55.000 0.00 0.58 36.87 5.03
3491 3560 0.602638 TGCGGACAAAATGAGTCGCT 60.603 50.000 0.00 0.00 36.87 4.93
3492 3561 0.179215 CTGCGGACAAAATGAGTCGC 60.179 55.000 0.00 0.00 36.87 5.19
3493 3562 0.179215 GCTGCGGACAAAATGAGTCG 60.179 55.000 0.00 0.00 36.87 4.18
3494 3563 0.169009 GGCTGCGGACAAAATGAGTC 59.831 55.000 0.00 0.00 35.29 3.36
3495 3564 1.577328 CGGCTGCGGACAAAATGAGT 61.577 55.000 0.00 0.00 0.00 3.41
3496 3565 1.135315 CGGCTGCGGACAAAATGAG 59.865 57.895 0.00 0.00 0.00 2.90
3497 3566 1.573829 GACGGCTGCGGACAAAATGA 61.574 55.000 14.45 0.00 0.00 2.57
3498 3567 1.154225 GACGGCTGCGGACAAAATG 60.154 57.895 14.45 0.00 0.00 2.32
3499 3568 2.332654 GGACGGCTGCGGACAAAAT 61.333 57.895 14.45 0.00 0.00 1.82
3500 3569 2.975799 GGACGGCTGCGGACAAAA 60.976 61.111 14.45 0.00 0.00 2.44
3505 3574 4.612412 AAAACGGACGGCTGCGGA 62.612 61.111 14.45 0.00 35.09 5.54
3506 3575 4.383602 CAAAACGGACGGCTGCGG 62.384 66.667 0.00 5.60 35.09 5.69
3507 3576 4.383602 CCAAAACGGACGGCTGCG 62.384 66.667 0.00 0.00 36.56 5.18
3508 3577 4.038080 CCCAAAACGGACGGCTGC 62.038 66.667 0.00 0.00 36.56 5.25
3509 3578 2.190841 AACCCAAAACGGACGGCTG 61.191 57.895 0.00 0.00 36.56 4.85
3510 3579 2.190841 CAACCCAAAACGGACGGCT 61.191 57.895 0.00 0.00 36.56 5.52
3511 3580 2.333581 CAACCCAAAACGGACGGC 59.666 61.111 0.00 0.00 36.56 5.68
3512 3581 3.035727 CCAACCCAAAACGGACGG 58.964 61.111 0.00 0.00 36.56 4.79
3513 3582 2.333581 GCCAACCCAAAACGGACG 59.666 61.111 0.00 0.00 36.56 4.79
3514 3583 2.333581 CGCCAACCCAAAACGGAC 59.666 61.111 0.00 0.00 36.56 4.79
3515 3584 3.597728 GCGCCAACCCAAAACGGA 61.598 61.111 0.00 0.00 36.56 4.69
3516 3585 4.992294 CGCGCCAACCCAAAACGG 62.992 66.667 0.00 0.00 0.00 4.44
3517 3586 4.992294 CCGCGCCAACCCAAAACG 62.992 66.667 0.00 0.00 0.00 3.60
3518 3587 3.597728 TCCGCGCCAACCCAAAAC 61.598 61.111 0.00 0.00 0.00 2.43
3519 3588 3.597728 GTCCGCGCCAACCCAAAA 61.598 61.111 0.00 0.00 0.00 2.44
3520 3589 4.877619 TGTCCGCGCCAACCCAAA 62.878 61.111 0.00 0.00 0.00 3.28
3521 3590 4.877619 TTGTCCGCGCCAACCCAA 62.878 61.111 0.00 0.00 0.00 4.12
3522 3591 4.877619 TTTGTCCGCGCCAACCCA 62.878 61.111 0.00 0.00 0.00 4.51
3523 3592 3.140225 TTTTTGTCCGCGCCAACCC 62.140 57.895 0.00 0.00 0.00 4.11
3524 3593 2.413765 TTTTTGTCCGCGCCAACC 59.586 55.556 0.00 0.00 0.00 3.77
3538 3607 4.293648 GCGTTGGGCCGGCTTTTT 62.294 61.111 28.56 0.00 34.80 1.94
3547 3616 4.752879 TAGGTCAGCGCGTTGGGC 62.753 66.667 22.99 15.24 41.91 5.36
3548 3617 1.669760 TTTAGGTCAGCGCGTTGGG 60.670 57.895 22.99 0.00 0.00 4.12
3549 3618 1.495951 GTTTAGGTCAGCGCGTTGG 59.504 57.895 22.99 5.26 0.00 3.77
3550 3619 1.129809 CGTTTAGGTCAGCGCGTTG 59.870 57.895 17.58 17.58 0.00 4.10
3551 3620 0.598158 TTCGTTTAGGTCAGCGCGTT 60.598 50.000 8.43 0.00 0.00 4.84
3552 3621 1.007038 TTCGTTTAGGTCAGCGCGT 60.007 52.632 8.43 0.00 0.00 6.01
3553 3622 1.414897 GTTCGTTTAGGTCAGCGCG 59.585 57.895 0.00 0.00 0.00 6.86
3554 3623 1.414897 CGTTCGTTTAGGTCAGCGC 59.585 57.895 0.00 0.00 0.00 5.92
3555 3624 1.414897 GCGTTCGTTTAGGTCAGCG 59.585 57.895 0.00 0.00 0.00 5.18
3556 3625 1.414897 CGCGTTCGTTTAGGTCAGC 59.585 57.895 0.00 0.00 0.00 4.26
3573 3642 1.069378 GGTAGACGAAAGCGGACACG 61.069 60.000 0.00 0.00 43.17 4.49
3574 3643 0.243095 AGGTAGACGAAAGCGGACAC 59.757 55.000 0.00 0.00 43.17 3.67
3575 3644 0.242825 CAGGTAGACGAAAGCGGACA 59.757 55.000 0.00 0.00 43.17 4.02
3576 3645 1.077089 GCAGGTAGACGAAAGCGGAC 61.077 60.000 0.00 0.00 43.17 4.79
3577 3646 1.214589 GCAGGTAGACGAAAGCGGA 59.785 57.895 0.00 0.00 43.17 5.54
3578 3647 1.810030 GGCAGGTAGACGAAAGCGG 60.810 63.158 0.00 0.00 43.17 5.52
3579 3648 3.782042 GGCAGGTAGACGAAAGCG 58.218 61.111 0.00 0.00 44.79 4.68
3586 3655 0.252197 AAATGGGTCGGCAGGTAGAC 59.748 55.000 0.00 0.00 36.70 2.59
3587 3656 0.539986 GAAATGGGTCGGCAGGTAGA 59.460 55.000 0.00 0.00 0.00 2.59
3588 3657 0.463833 GGAAATGGGTCGGCAGGTAG 60.464 60.000 0.00 0.00 0.00 3.18
3589 3658 1.202099 TGGAAATGGGTCGGCAGGTA 61.202 55.000 0.00 0.00 0.00 3.08
3590 3659 2.355115 GGAAATGGGTCGGCAGGT 59.645 61.111 0.00 0.00 0.00 4.00
3591 3660 1.750399 CTGGAAATGGGTCGGCAGG 60.750 63.158 0.00 0.00 0.00 4.85
3592 3661 1.002134 ACTGGAAATGGGTCGGCAG 60.002 57.895 0.00 0.00 0.00 4.85
3593 3662 1.002624 GACTGGAAATGGGTCGGCA 60.003 57.895 0.00 0.00 0.00 5.69
3594 3663 1.749258 GGACTGGAAATGGGTCGGC 60.749 63.158 0.00 0.00 0.00 5.54
3595 3664 0.255890 ATGGACTGGAAATGGGTCGG 59.744 55.000 0.00 0.00 0.00 4.79
3596 3665 2.128771 AATGGACTGGAAATGGGTCG 57.871 50.000 0.00 0.00 0.00 4.79
3597 3666 4.890158 AAAAATGGACTGGAAATGGGTC 57.110 40.909 0.00 0.00 0.00 4.46
3615 3684 3.648009 CCAACGCAAATCAGCCTAAAAA 58.352 40.909 0.00 0.00 0.00 1.94
3616 3685 2.609244 GCCAACGCAAATCAGCCTAAAA 60.609 45.455 0.00 0.00 34.03 1.52
3617 3686 1.067915 GCCAACGCAAATCAGCCTAAA 60.068 47.619 0.00 0.00 34.03 1.85
3618 3687 0.525761 GCCAACGCAAATCAGCCTAA 59.474 50.000 0.00 0.00 34.03 2.69
3619 3688 1.643868 CGCCAACGCAAATCAGCCTA 61.644 55.000 0.00 0.00 34.03 3.93
3620 3689 2.964978 GCCAACGCAAATCAGCCT 59.035 55.556 0.00 0.00 34.03 4.58
3621 3690 2.504681 CGCCAACGCAAATCAGCC 60.505 61.111 0.00 0.00 34.03 4.85
3631 3700 4.368808 CTTGTGTCCGCGCCAACG 62.369 66.667 0.00 0.00 44.07 4.10
3632 3701 2.970324 TCTTGTGTCCGCGCCAAC 60.970 61.111 0.00 0.00 0.00 3.77
3633 3702 2.970324 GTCTTGTGTCCGCGCCAA 60.970 61.111 0.00 0.00 0.00 4.52
3637 3706 3.103911 GTCCGTCTTGTGTCCGCG 61.104 66.667 0.00 0.00 0.00 6.46
3638 3707 3.103911 CGTCCGTCTTGTGTCCGC 61.104 66.667 0.00 0.00 0.00 5.54
3639 3708 3.103911 GCGTCCGTCTTGTGTCCG 61.104 66.667 0.00 0.00 0.00 4.79
3640 3709 3.103911 CGCGTCCGTCTTGTGTCC 61.104 66.667 0.00 0.00 0.00 4.02
3641 3710 3.764049 GCGCGTCCGTCTTGTGTC 61.764 66.667 8.43 0.00 36.67 3.67
3661 3730 4.459089 AGGAAAGAGGGCGAGCGC 62.459 66.667 6.27 6.27 41.06 5.92
3662 3731 2.202810 GAGGAAAGAGGGCGAGCG 60.203 66.667 0.00 0.00 0.00 5.03
3663 3732 1.448717 GTGAGGAAAGAGGGCGAGC 60.449 63.158 0.00 0.00 0.00 5.03
3664 3733 1.219393 GGTGAGGAAAGAGGGCGAG 59.781 63.158 0.00 0.00 0.00 5.03
3665 3734 2.646175 CGGTGAGGAAAGAGGGCGA 61.646 63.158 0.00 0.00 0.00 5.54
3666 3735 2.125512 CGGTGAGGAAAGAGGGCG 60.126 66.667 0.00 0.00 0.00 6.13
3667 3736 2.269241 CCGGTGAGGAAAGAGGGC 59.731 66.667 0.00 0.00 45.00 5.19
3668 3737 2.269241 GCCGGTGAGGAAAGAGGG 59.731 66.667 1.90 0.00 45.00 4.30
3669 3738 2.269241 GGCCGGTGAGGAAAGAGG 59.731 66.667 1.90 0.00 45.00 3.69
3670 3739 2.269241 GGGCCGGTGAGGAAAGAG 59.731 66.667 1.90 0.00 45.00 2.85
3671 3740 3.327404 GGGGCCGGTGAGGAAAGA 61.327 66.667 1.90 0.00 45.00 2.52
3672 3741 4.778143 CGGGGCCGGTGAGGAAAG 62.778 72.222 1.90 0.00 45.00 2.62
3688 3757 1.447838 AATGTGCCACCGACTAGCG 60.448 57.895 0.00 0.00 40.47 4.26
3689 3758 1.369091 CCAATGTGCCACCGACTAGC 61.369 60.000 0.00 0.00 0.00 3.42
3690 3759 0.249120 TCCAATGTGCCACCGACTAG 59.751 55.000 0.00 0.00 0.00 2.57
3691 3760 0.908910 ATCCAATGTGCCACCGACTA 59.091 50.000 0.00 0.00 0.00 2.59
3692 3761 0.038166 AATCCAATGTGCCACCGACT 59.962 50.000 0.00 0.00 0.00 4.18
3693 3762 0.451783 GAATCCAATGTGCCACCGAC 59.548 55.000 0.00 0.00 0.00 4.79
3694 3763 0.037447 TGAATCCAATGTGCCACCGA 59.963 50.000 0.00 0.00 0.00 4.69
3695 3764 0.171007 GTGAATCCAATGTGCCACCG 59.829 55.000 0.00 0.00 0.00 4.94
3696 3765 1.067635 GTGTGAATCCAATGTGCCACC 60.068 52.381 0.00 0.00 0.00 4.61
3697 3766 1.612950 TGTGTGAATCCAATGTGCCAC 59.387 47.619 0.00 0.00 0.00 5.01
3698 3767 1.612950 GTGTGTGAATCCAATGTGCCA 59.387 47.619 0.00 0.00 0.00 4.92
3699 3768 1.888512 AGTGTGTGAATCCAATGTGCC 59.111 47.619 0.00 0.00 0.00 5.01
3700 3769 2.413239 CGAGTGTGTGAATCCAATGTGC 60.413 50.000 0.00 0.00 0.00 4.57
3701 3770 2.413239 GCGAGTGTGTGAATCCAATGTG 60.413 50.000 0.00 0.00 0.00 3.21
3702 3771 1.806542 GCGAGTGTGTGAATCCAATGT 59.193 47.619 0.00 0.00 0.00 2.71
3703 3772 1.131126 GGCGAGTGTGTGAATCCAATG 59.869 52.381 0.00 0.00 0.00 2.82
3704 3773 1.453155 GGCGAGTGTGTGAATCCAAT 58.547 50.000 0.00 0.00 0.00 3.16
3705 3774 0.605319 GGGCGAGTGTGTGAATCCAA 60.605 55.000 0.00 0.00 0.00 3.53
3706 3775 1.003839 GGGCGAGTGTGTGAATCCA 60.004 57.895 0.00 0.00 0.00 3.41
3707 3776 2.100631 CGGGCGAGTGTGTGAATCC 61.101 63.158 0.00 0.00 0.00 3.01
3708 3777 2.740714 GCGGGCGAGTGTGTGAATC 61.741 63.158 0.00 0.00 0.00 2.52
3709 3778 2.742372 GCGGGCGAGTGTGTGAAT 60.742 61.111 0.00 0.00 0.00 2.57
3710 3779 4.980805 GGCGGGCGAGTGTGTGAA 62.981 66.667 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.