>input_sequence_43383
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATGGCTGAAGCATGCCCTGATAGTCGGC
GATGCCTACCTCCTTGGATGATGAAACCCTGCACGAGTAATGAGGTGTCAAAGACTGAGCATCGGAATAAGCAGTCGGCA
GAATCTGATAAGGGGTCAGGGGCTCTATATCAGGCTAAGCCCACCAGAAGGCAGAAAAAAATTGTGGATCCAGAGGATGC
CGGTGGGCTGAAGGCGTTGCAGCGATGCCAGGGTAAAGAGAAGCCCAGGAGAAAGAGCAAGGATGCTGATCGTGCTGTCA
CAGATGAATTTGACGAAATCGAGAAAATAACTTGTAAGAATGAGAGGAAAGTTAGTGGAAGAGCTGCTCCGAAGAATAGC
AGGAAACGGATGCTGGAGGATGTGGGATCAGATGCATCGTCATCAGGAATAACTGATGATGAGATGGAGCTTAGTGCTGG
CAATTCCAGAGCTTTGCAACGATGTCAGGGTAGAGAAAAGACCAGAAGAAAGCGTGACAGTGCTGATTATTCTGCCAAAG
ATGAACTTGAAGAAATTGAGAAAACAACTCGTAAGAATGTCACAAAAGTGACTGGCAGAGCTGCTCCGAAGAATAGCAAG
AAACAAAAGCCGGATAATGTTGGATCAGAAGCATTATCATCAGGTACAACTGATGATGAGATAGAGCTTACTGTGGAAGA
TCTTGTGAGCATAGCTGAAGAGGTAAACCATAATTCTTATTGCAGTTTTGTTATTTTACTTGTCTTCAGGTTTGACACAT
CTTCTGGTGTTGTTATGCAATTCCCCTTAAA-TACGCTAGTTCCTGTTCATTACTTCACTGAACATCTGGGAATTATGCA
GTGCTTCCCAATTTATTGGCTTTATTGTTGATTGACGCAGGCAGGTCTAGTACAACTCATTACTTGTTTTATAGAAATAA
TTGG-A-AAAAAGTGACCTTTGCCAATAGGCAATGGCCCCATTATGCTTAGGAGTGACCCTAGTGAATACTTATCATGGA
CCGATCTGGCTTGCACCTTGATTATATTTGTACATGCAACTCTCAAGAGACAAACATGCATGGTGTAGGCAAACTCTT--
--TTCAGTCCAGTCCTATCATTAGTTTGAAGACATGAGTAAGCATGA---------------------------------
---TAATAGGAGACTTGTTCTGAGTGCTAATGACATCTTCTCCATTGAATTGAGGCCCTAATTTCATTCTGTGACAGAAA
ATAATTTACCAACTTTTCGCCCCCTTTTTACATTTTCTGGCTGCCTAGCAAACCAGCAATCCTGTTCGAAGTTTTGCTTT
GAGTAACTA--AGTATACCACTGAAGGTATTCTGATGCATTTACATGATGCAGATTGTAAATGCTGATAAAGAGAAGCTA
CAAGATATACGGACCACAAAGACATCCCGCTATGAAGAGCGTCCTCCACGGCCTCCAGTGTCTACTCCTACTGATACAGG
AGGATCAGTATCAAGCACTTGGTCAACAAAGGGGTTGATGCAGTGCACGGCAGCTACTACCACAGATGAAACTCCAAGCG
AGTGCAGAGTAGACAAGAACAAGAGACATGAAGAACCAGAGTGTCCACCACGTATCAAAATGACCGGTGATGTTGCTGAG
GATATGATGAACATATTGCTCGGACCCCTGTGGAATAGTGAGCCTGCAGCCTATGAAAATAAACCCGAGGCTGTGGTACC
AAGGACCGTGAACGTGAATCTTGCGCCGCAGCGGAAAAACGACTGGCAGAAGACTGTAGCACAAGTGCAGGGGGCACCTG
TGGCGAAAAAGAAGAGCAGCCTGAAAGATATGGTGGCCTTTTTTCTTGACTAG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr1A_1_TraesCS1A01G159400
TACTTCTTTTAACCGTAAGTGAGTAAATGTTGAATTACAAAAGATAACGTTAGGGGCCAGTTCTTTTGGTAGCTTAAAAG
ATAAGCCGCCTTCTTCCCAGCTTTTTTCGTAAGCCGCCTCTCAACAAAATTTCAGAGCGGCTTATTTTTTAAGTTGGGGA
GAGGCGGCTTATTTTTTAAGCCGCCCAAAGAAATGATCTAGATGTAGAAATTCCCGCAAAGAAAAAAAGGTAATGCAGA-
-AATTTTTAAACCCTAAAAAAATTTAACCTTAGAAAAGTTCACCAATACAAACGGTACAACGAGCCGTTGGGGCCTTTTT
AATTACTCCGACTTTCAAGTTATCCATGAACCCCTTCCTTTCTCGAAGTCTCTGGTCAAGGCAACATAAACAGTTTCCAA
ATCCCAATCCGTCGTCTCGTCCTCAGCCGGCCTTGAGCGAGCCGCTCCGCCCCGCCGTAGGGCGTCACTGACCGGAGCTC
CTACCAACCACTGCGGCAATCCCATAC--CGCACCGTTGGCCACGTAGGCTCATTGATTGAGGTAATCCCACGGCCACGG
CCACGCGGCACACCCGACTTTTCCTCGCTTCCCCTCTCCCCTCTCCCCTCAACCAGCTAGGAAGAAGGTGGGG-CGGGGT
CAGATGCCGGTGAATCCTCCGGCGTCGCCCCGTCGGAAAGATCAGATCTTGGGGCCTTGAGAGCGGGGAAAATTGGTGCT
TCTTGGATTCTAGGGTTCGATCGGGCTAGGGCCCCCTTCCTTTTATTTCGCCTTCTTTCTTTCTTTCTTGGGGTTGCGGT
GTAGTCTCAAGTTTGAGGGGCGACGGGAGTTTGTTTACGATGAGAAAATTCGACAT--AGTTTATTCAAGCTCTAATTCT
TGTGCAGGTGGCTGATTGTTTCAGATCGTCTCGCTCA----ATTGCGATCAGTTTCTTGATTTGTTTTGCTACTGAGACT
GGGTAG-TCAAATTCAGGGCATTGTGTATATTCTGTTGGCCTGTCTTTGAGGATGGCTGAAGCATGCCCTGATAGTCGGC
GATGCCTACCTCCTTGGATGATGAAACCCTGCACGAGTAATGAGGTGTCAAAGACTGAGCATCGGAATAAGCAGTCGGCA
GAATCTGATAAGGGGTCAGGGGCTCTATATCAGGCTAAGCCCACCAGAAGGCAGAAAAAAATTGTGGATCCAGAGGATGC
CGGTGGGCTGAAGGCGTTGCAGCGATGCCAGGGTAAAGAGAAGCCCAGGAGAAAGAGCAAGGATGCTGATCGTGCTGTCA
CAGATGAATTTGACGAAATCGAGAAAATAACTTGTAAGAATGAGAGGAAAGTTAGTGGAAGAGCTGCTCCGAAGAATAGC
AGGAAACGGATGCTGGAGGATGTGGGATCAGATGCATCGTCATCAGGAATAACTGATGATGAGATGGAGCTTAGTGCTGG
CAATTCCAGAGCTTTGCAACGATGTCAGGGTAGAGAAAAGACCAGAAGAAAGCGTGACAGTGCTGATTATTCTGCCAAAG
ATGAACTTGAAGAAATTGAGAAAACAACTCGTAAGAATGTCACAAAAGTGACTGGCAGAGCTGCTCCGAAGAATAGCAAG
AAACAAAAGCCGGATAATGTTGGATCAGAAGCATTATCATCAGGTACAACTGATGATGAGATAGAGCTTACTGTGGAAGA
TCTTGTGAGCATAGCTGAAGAGGTAAACCATAATTCTTATTGCAGTTTTGTTATTTTACTTGTCTTCAGGTTTGACACAT
CTTCTGGTGTTGTTATGCAATTCCCCTTAAA-TACGCTAGTTCCTGTTCATTACTTCACTGAACATCTGGGAATTATGCA
GTGCTTCCCAATTTATTGGCTTTATTGTTGATTGACGCAGGCAGGTCTAGTACAACTCATTACTTGTTTTATAGAAATAA
TTGG-A-AAAAAGTGACCTTTGCCAATAGGCAATGGCCCCATTATGCTTAGGAGTGACCCTAGTGAATACTTATCATGGA
CCGATCTGGCTTGCACCTTGATTATATTTGTACATGCAACTCTCAAGAGACAAACATGCATGGTGTAGGCAAACTCTT--
--TTCAGTCCAGTCCTATCATTAGTTTGAAGACATGAGTAAGCATGA---------------------------------
---TAATAGGAGACTTGTTCTGAGTGCTAATGACATCTTCTCCATTGAATTGAGGCCCTAATTTCATTCTGTGACAGAAA
ATAATTTACCAACTTTTCGCCCCCTTTTTACATTTTCTGGCTGCCTAGCAAACCAGCAATCCTGTTCGAAGTTTTGCTTT
GAGTAACTA--AGTATACCACTGAAGGTATTCTGATGCATTTACATGATGCAGATTGTAAATGCTGATAAAGAGAAGCTA
CAAGATATACGGACCACAAAGACATCCCGCTATGAAGAGCGTCCTCCACGGCCTCCAGTGTCTACTCCTACTGATACAGG
AGGATCAGTATCAAGCACTTGGTCAACAAAGGGGTTGATGCAGTGCACGGCAGCTACTACCACAGATGAAACTCCAAGCG
AGTGCAGAGTAGACAAGAACAAGAGACATGAAGAACCAGAGTGTCCACCACGTATCAAAATGACCGGTGATGTTGCTGAG
GATATGATGAACATATTGCTCGGACCCCTGTGGAATAGTGAGCCTGCAGCCTATGAAAATAAACCCGAGGCTGTGGTACC
AAGGACCGTGAACGTGAATCTTGCGCCGCAGCGGAAAAACGACTGGCAGAAGACTGTAGCACAAGTGCAGGGGGCACCTG
TGGCGAAAAAGAAGAGCAGCCTGAAAGATATGGTGGCCTTTTTTCTTGACTAGAGCAAAGTTGAAGTGCTGAAGTGCATA
CGCTAGCAGCCTGGGAGCATTGTTATGCCGATTAGCTGGTTCCACGCATG-TGCATGGCCTGTAACTATTGTCCT-----
---GCGGCGTTTTAGTCCACGTGTAAATTATATTGTTTTGGTAGGATAACAAGTCGCTTTTCTTTTCCTTTTGGGGGGAG
AATAATGTTGGTCATTTGTATAGTACTCCCTCTGTCCCGGAATATAAGAACGTTTTTGACACCATGCTAGTGTTAAAAAC
GTTCTTATATTTTGGGACGGAGGGAGTAGTAATGTTCTTGCCTTCAAGTTGAAGATGTTTGG-TACTGCCTGTGATGTCA
TTGTCATCTTACCTTTGATGATCTTGACTGTGTTTAGGTGCAGGTAAAGAAC-CACAGGTTTAGCTTCCACAGATGATTA
AAACCATATTTATTTTGATTTATATTTCTGCTCTTTACAGTGGAAGTTCCTCAATTGCGATGCTGGATAGATGCCTTTCC
AGTTGTTTTGACGGTTTTGGTCATTGTTGAGCTCAGAATCAGCTTATGTGAGTGTACATTTGAGCAAAAATAGGGGCATT
TGTTTTCTCTAGATTGAGCTTCCAGATAAATTTTGTGAGGCAAATGTCTTTGTTAAAATCCATTTAGCAATAAAATCAGA
GCTATATCCATGTCAATGTCCTTAGAGCAACTCCAATGGAGCGACTCATTTTGTCCGCAGCCGTCCGTTTTGGGTTGGCG
CGGACAAAAAAGCCGGCCCAACGCGCTGACCTAAACGAACGCGTGTCCGCTTTCGTCTACCTGCCGACCCATTTCCAGTC
CATTTTTTAGGCTGATTTGCGTTGGCGCGGACACAAGACGGACGCGCGCGCGCTCGCCCTCTTTCCTCACCGGCCCCGCT
AGTCGGTGGCACATTGGATTCACACACTCGCCCGCCTGCTACGTCGCCGATGCCACCGGCCATTTTTTCAGATTAAAATG
GATACATAGATAGTTTTAGTATAC
>chr1D_208
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------AAAATCCCGCAAGGAAAAAAGGGTAATGTAGA-
-AATTTT-GAACCCTATAAAAAAACAA-------------AACCAATACGGACGAGACAACGAGCCGTTGGGGCCGTTTT
AATTACTCCGGCTTTCAAGTTATCCATGAACCCCTTCCTTTCTCGAAGTCTCTGGTCAAGGCAACATAAACAGTTTCCAA
ATCCCAATCCGTCGTCTCGTCCTCCGCCGGCCTTGGGCGAGCCGCTCCGCCCCGCCGTAGGGCCTCACTGACCGGAGCTC
CTACCAACCACTGCGGCAAGCCCATAC--C--ACCGTTGGCCACGTAGGCTCCTTGATTGAGGTAATCCCACGGCCACGG
CCACGCGGCACACCCGACTTTCCTCGCTTT--------CCCTCTCCCCTCAACCAGCTAGGAAGAAGGTGGGGT-GGGGT
CAGATGCCGGTGAATCCTCCGGCATCGCCCCATCGGAAAGATCGGATCTTGGGGCCTTGAGAGCGGGGGAAATCGGTGCT
TCTTGGGTTCTAGGGTTGTATCGGGCTAGGGCCCCTTTCCTTTTATTTCGCCTTCTTTCTTTCTTTCTTGGGGTTGCGGT
GTAGTTTCAAGTTTGAGGGGCGACGGGAGTTTGTTTACGATGAGAAAATTCGACAT--AGTTTATTCAGGCTCTAATTCT
TGTGCAGGTGGCTGATTGTTTCAGATCGTCTCGCTCACAAAATTGCGATCAGTTTCTTGATTTGTTTTGCTACTGAGACT
GGGTAG-TCAAATTCAGGGGATTGTGTATATTCTGTTGGCCTGTCTTTGAGGATGGCTGAAGCATGCCCTGATAGTCGGC
GATGCCTACCTGCTTGGATGATGAAACCCTGCTCGAGTAATGAGGTGTCAAAGACTGAGCATCGGAATAAGCAGTCGGCG
GAATCTGATAAGGGATCAGGGGCTCTAGATCAGGCTAAGCCCATCAGAAGGCAGAAAAAAATTGTGGATCCAGAGGATGC
TGGTGGACTGAAGGCGTTGCAGCGATGCCAGGGTAAAGAAAAGGCCAGGAGAAAGAGCAAGGATGCTGATCGTGCTGTCA
CGGATGAATTTGGCGAAATCGAGAAAATAACTTGTAAGAATGAGAGGAAAGTTAGTGGAAGAGCTGCTCCGAAGAATAGC
AGGAAGCGGATGCTGGAGGATGTGGGATCAGATGCATCGTCATCAGGAATAACTGATGATGAGATGGAGCTCAGTGCTGG
CAATTCCAGAGCTTTGCAACGATGTCAGGGTAGAGAAAAGACCAGAAGAAAGCGCGACAGTGCTGATTATTCTGCCAAAG
ATGAACTTGAAGAAATTGAGAAAACAACTCGTAAGAATGTGACAAAAGTGACTTGCAGAGCTGCTCCAAAGAATAGCAAG
AAACAAAAGCCGGATAATGTTGGATCAGAAACATTGTCATCAGGTACAACTGATGATGAGATAGAGCTTACTGTGGAAGA
TCTTGTGAGCATAGCTGAAGAGGTAAACCATAATTCTTATTGCATTTTTGTTGTTTTACTTGTCTTCAGGTTTGACACAT
CTTCTGGTGGTGTTATGCAATTCCCCTTAAA-TACGCTGGTTCCTGTTCATTACCTCACTGAACATCTGAGAATTATGCA
CTGCGTGCCAATTTATTAGCTTTATTGTTGATTGGCGCAGGCAGATCTAGTACAACTCATTACTTGTTTTATAGAAATAA
TTGG-AAAAAAAATGACCTTTGCCAATAGGCAATGGCCCCATTATGCTTAGGAGTGACCCTAGTGAATACTTTTCATGGA
CCGATCTGGCTTGCACCTTGATAATATTTGTGCATGCAACTCTCAAGAGACAAACATGCACGGTGTAGGCAAACTCTTGT
TTTTCAGTCCAGTCCTATCATTAGTTTGAAGACATGATTAAGCATGATGTTTCATTTCTAACTTCTCTGCCAAAGCTGAA
GCTTAATAGGAGACTTATTCTGACTGCTAATGACATCTTCTCCATTGAATTGAGGTCCTAATTTCATTGTGCGGCAGAAA
ATAATTTACCAACTTTTCG-CCCCTTTTTACATTTTCTGGCTGCTTAGCAAACCAGCAATCCTGTTCGAAGTTTTGCTTT
GAGTAACTATAAGTATACCACTGAAGGTATTCTGATGCATTTACATGATGCAGATTGTAAATGCTGATAAAGAGAAGCTA
CAAGATATACGGGCCACAAAGACAGCCCGCTATGAAGAGCGTCCTCCACGGCCTCCAATCTCTACTCCTGCTGATACAGG
AGGATCAACATCAAGCACTTGGTCAACAAAGGGGTTGATGCAGTGCACGGCAGCTACTACCACAGATGAAACTCCAAGCG
AGTGCAGAGTAGACAAGAACAAGAGACATGAAGAACCAGAGCGTCCACCAAGTATCAAAATGACCGGTGATGTTGCTGAG
GATATGATGAACATATTGCTCGGACCCCTGTGGAATAGTGAACCTGCAGCCTATGAATATAAACCCGAGGCTGTGGTACC
GAGGACCGTGAACGTGAATCTTGCGCCGCAGCGGAAAAACGATTGGCAGAAGACTGTAGCACAAGCGCAGGGGGCACCTG
TGGCGAAAAAGAAAAGCAGCCTGAAAGATATGGTGGCCTTTTTTCTTGAGTAGAGCAAAGTTGAAGTGCTGAACTGCATA
CACTAGCAGCCTGGGAGCATTGTTATGCCGATTAGCTGGTTCCACGCATG-TGCATGGCCTGTAACTATTGTCCATTTGT
CCCGCGGCGTTTTAGTCCACGTGTAAATTATATTATTTTGGTAGGATAATAAGTCGCTTTTCTTTTCCTTTTCGGGGGAC
AATAATGTTGGTCATTTGTACAGTAGT-----------------------------------------------------
-------------------------------ATGTTCTTGCCTTCAAGTTGAAGATGTTTGA-TACTGCCTGTGCTGTCA
TTGTCATCTTACCTTTTATGATCTTGACTGTGTTCAGGTTCAGGT-AAGAAC-CACAGGTTTAGCTTTCATGGATGATTA
AAACCATATTTATTTTGATTTATATTTTTGCTCTTTATAGTGGAAGTCCCTCAACTGCAGTGCTGGATAGATGCCTTCCC
AGTTGTTTTGCCGGTTTTGGTCATTGTTGAGCTCAGAATCAGCTTATGTGAGTGTACATTTGAGCAAAAATGGGGGCATT
TGTTTTCTCTAGAGTGAGCTTTCAGATAAATTTTGTGAGGCAAATGTCTTTGTTAAAATCCATTTAGCTATAACATCAGA
GCTATATCCATGTCAATGTCCTTA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr1B_208
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------AAAATCCCGCAAGGAAAAAAAAGGGTAATGTTA
GAAATTTTGAACCCTAAAAAAAATTAACCTTCGAAAAGTTAACCAATACGAACGGGACAACGAGCCGTTGGGGCCGTTTT
AATTACTCCGACTTTCAAGTTATCCATGAACCCCTTCCTTTCTCGAAGTCTCTGGTCAAGGCAACATAAACAGTTTCCAA
ATCCCAATCCGTCGTCTCGTCCTCCGCCGGCCTTGGGCGAGCCGCTCCGCCCCGCCGTAGGGCCTCACCGACCGGAGCTC
CTACCAACCACTGCGGCAATCACATACCGC--ACCGTTGGCCACGTAGGCTCCTTGATTGAGGTAATCCCACGGCCACGG
CCACGCGGCACACCCGACTTTCCTCGCTTT--------CCCTCTCCCCTCAACCAGCTAAGAAGAAGGTGGGGGCGGGGT
CAGATGCCGGTGAGTCCTCCGGCGTCGCCCCGTCGGAAAGATGGGATCTTGGGGCCCTCAGAGCGGGGAAAATTGGCGCT
TCTTGGGTTCTAGGGTCGGATCGGGCTAGGGCCCCCTTCCTTTTACTTCGCCTTGTTTCTTTCTTTC-------------
---------------------------------TTTACGATGAGAAAATTCGACATGTAGTTTATTCAGGATCTAATTCT
TGTGCTGGTGGCT-ATTGTTTCAGATCGTCTCGTTCAGAAAATTGCGATCAATTTCTTGATTCGTTTTTCTACTGAGACT
GGGTAGTTCAAATTCAGGGGATTGTGTATACTCTGTTGGCCTGCCTTTGAAGATGGCTGAAGCATGCCCTGATAATCGGC
GATGTCTACCTGCTTGGATGATGAAGCCGTGCTCAAGTAATGAAGTGTCAAAGACTGAGCATCGGAATAAGCAGTCGGCG
GAATCTGATAAGGGATCAGGGGCTCTGGATCAGGCTAAGCCCATCAGAAGGCAGAAAAAAATTGTGGATCCAGAGGATGC
TGGTGGACTGAAGGCGTTGCAGCGATGCCAGGGTAAAGAAAAGGCCAGGAGAAAGAGCAAGGATGCTGATCGTGCTGTCA
CGGATGAATTTGGTGAAATCGAGAAAATAACTTGTAAGAATGAGAGGAAAGTTAGGGGAAGAGCTGCTCCGAAGAATAGC
AGGAAGCGGATGCTGGAGGATGTGGGATCAGATGCATCGTCATCAGGAATAACTGATGATGAGATGGAGCTTAGTGCTGG
CAATTCCAGAACTTTGCAACGATGTCAGGGTAGAGAGAAGAACAGAAGAAAGCGTGACAGTGCTGATTATTCTTCCAAAG
ATGAACTTGAAGAAATTGAGAAAACAACTCGTAAGAATGTGACAAAAGTGACTTGCAGAGCTGCTCCGAAGAATAGCAAG
AAACAAAAGCCGGATAATGTTGGATCAGAAGCATTGTCATCAGGTACAACTGATGATGAGATAGAGCTTACTGTGGAAGA
TCTTGTGAGCATAGCTGAAGAGGTAAACCATAATTCTTTTTGCATTTTTGTTGTTTTACTTGTCTTCAGGTTTGACACAT
CTTCTGGTGTTGTTATGCAATTCCCCTTAAAATACGCTGGTTCCTGTTCATTACTTCACTGAACATCTGAGAATTATGCA
CTGCGTGCCAATTTATTAGCTTTATTTTTGATTGATGCAGGCAGATCTAGTACAACTCATTACTTGTTTTATAGAAATAA
TTAGAA-AAAAAATGACCTTTGCCAATAGGCAATGGCCCCATTATGCTTAGGAGTGACCCTAGTGAATACATTTCATGGA
CCGATCTGGCTTGCACCTTGATAATATTTGTGCATGCAACTCTCAAGAGACAAACATGCACGATGTAGGCAAACTCTTGT
TTTTCAGTCCAGTCCTATCATTAGTTTGAAGACATGATTAAGCATGATGTATCATTTCTAACTTCTCTGCCAAAGCTGAA
GCTTAATAGGAGACTTATTCTGAGTGCTAATGACATCTTCCCCATAGAATTGAGGTCCTAATTTCATTGTGTGGCAGAAA
ATAATTTACCACCTTTTCGCCCCCTTTTTACATTTTCTGGCTGCCTAGCAAACCAGCAATCCTGTTCGAAGTTTTGCTTT
GAGTAACTA--AGTATACCACCGAAGGTATTCTGATGCATTTACATGATGCAGATTGTAAATGCTGATAAAGAGAAGCTA
CAAGATATACGGACCACAAAGACGGCCCGCTATGAAGAGCGTCCTCCACGGCCTCCAGTCTCTACTCCTGTTGATACAGG
AGGATCAATATCAAGCACTTGGTCAACAAAGGGGTTGATGCAGTGCACAACAGCTACTACCACAGATGAAACTCCAAGCG
AGTGCAGAGTAGACAAGAACAAGAGACATGAAAAACCAGAGCGTCCACCAAGTATCAAAATGACCGGTGATGTTGCTGAG
GATATGATGAACATATTGCTCGGACCCCTGTGGAATAGTGAACCTGCAGCCTATGAAAATAAACCCGAGGCTGTGGTACC
GAGGACCGTGAACGTGAATCTTGCGTCGCAGCGGAAAAACGACTGGCAGAAGACTGTAGCACAAGTGCAGGGGGCACCTG
TGGCGAAAAAGAAGAGCAGCCTGAAAGATATGGTGGCCTTTTTTCTTGACTAGAGCAAAGTTGAAGTGCTGAACTGCATA
CACTGGCAGCCTGGGAGCATTGTTATGCTGATTAGCTGGTTCCACGCATGTTGCATGGCCTGTAACTATTGTCCATTTGT
CCCGCGGCGTTTTAGTCCACGTGTAAATTATATTATTTTGGTAGGATAGTAAGTCGCTTTTCTTTTCCTTTTTGGGGGAC
ACTAATGTTGGTCATTTGTACAGTAGT-----------------------------------------------------
-------------------------------ATGTTCTTGCCTTCAAGTTGAAGATGTTTTTTTACTGCCTGTGCTGTCA
TTGTCATCTTACCTTGTATGATCTTGACCAGGTTCAGGTTCAGGT-AAAGAATCACAGGTTTAGCTTTCACGGATGATTA
AAACCATATTTAT-TTGATTTATATTTTTGCTCTTTACAGTGGAAGTTCCTCAATTGCAGTGCTGGATAGATGCCTTCCC
AGTTGTTTTGCTGGATTTGGTCATTGTTGAGCTCAGAATCAGCTTATGTGAGTGTACATTTGAGCAAAAAGAGGGGCCTT
TGTTTTCTCTAGAGTGAGCTTCCAGATAAATTTTGTGAGGCAAATGTCTTCGTTAAAATCCATTTAGCAATAAAATCAGA
GCTATATCCATGTCAATGTCCTTA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--------S---------------S----
--------S-------------S--------S--------S--------S-----S-------------------S----
--------------------------------------------------------------------------------
------------------------S----------S---------------------------S----------------
------------------------------SS--------------------S---------------------------
---------------------S-SSSSS--SSSSSSSS------------------------------------------
-------------------------------------------S------------------------------------
------S----------S--------------------------------------------------------------
-----S--------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
-----------S--------------------S----------------------------------------------S
--------------S------------S---------------S------------------------------------
S-----S--------------------------------S---S------------------------------------
-S----------S-------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S------------S--------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------S-------S---------------------------
--------------------------------------S------------------------------S----------
S---S-S----------S--------------------------S-----------------------------------
------------S-----------------------------------------------------------S-------
----------------------S--------S----------------------------S-------------------
-------------------------------------S------------------------------------------
----------------S--------------------------------------S------------S----S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S----------------------------------S---------S----------
-------S------------------------------------------------------------------------
-----------------------------------------S--------S-----------------------------
-----------------------------------------S--------------------------------------
S-------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
-S------------------------------------------------------------------------S-----
----------------------------------S--------------S----------------------S------S
--------------------S----S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------S------------S-----
----------------S-----------------S----S-----S---------------------S---S--------
---------------------------S------------------------------SS-----------------S--
----------S---------------------------------------------------------------------
-------------S------------------------------------------------------------------
------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_175
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GGGGA
GAGGCGGCTTATTTT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_1240
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GAAGCCCAGGAGAAAGAGCA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>forward_591
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------ACCCGACTTTTCCTCGCTTC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_1993
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ATCATGGA
CCGATCTGGCTT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>forward_1282
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------ATGCTGATCGTGCTGTCA
CA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_3131
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TTTGGGACGGAGGGAGTAGT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
