Multiple sequence alignment - TraesCS1A01G148300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G148300 chr1A 100.000 4212 0 0 1 4212 255871277 255875488 0.000000e+00 7779.0
1 TraesCS1A01G148300 chr1D 95.774 3455 93 28 339 3772 201590310 201593732 0.000000e+00 5522.0
2 TraesCS1A01G148300 chr1D 96.512 172 4 2 3 173 201590136 201590306 2.480000e-72 283.0
3 TraesCS1A01G148300 chr1D 93.567 171 11 0 4011 4181 77381509 77381679 5.400000e-64 255.0
4 TraesCS1A01G148300 chr1B 94.958 3451 97 26 383 3804 289306320 289309722 0.000000e+00 5337.0
5 TraesCS1A01G148300 chr1B 92.857 182 12 1 1 181 289306114 289306295 3.230000e-66 263.0
6 TraesCS1A01G148300 chr1B 91.463 82 7 0 3691 3772 289309755 289309836 3.440000e-21 113.0
7 TraesCS1A01G148300 chr1B 100.000 29 0 0 341 369 289306293 289306321 2.000000e-03 54.7
8 TraesCS1A01G148300 chr2A 98.788 165 2 0 178 342 449289456 449289620 1.150000e-75 294.0
9 TraesCS1A01G148300 chr2A 96.951 164 5 0 179 342 750080893 750081056 4.150000e-70 276.0
10 TraesCS1A01G148300 chr2A 94.382 178 10 0 166 343 768613893 768613716 1.490000e-69 274.0
11 TraesCS1A01G148300 chr2A 95.349 172 7 1 171 342 133479140 133478970 5.370000e-69 272.0
12 TraesCS1A01G148300 chr2A 93.750 176 11 0 172 347 478761528 478761353 8.980000e-67 265.0
13 TraesCS1A01G148300 chr4A 97.647 170 3 1 176 344 422998203 422998372 1.480000e-74 291.0
14 TraesCS1A01G148300 chr4A 93.820 178 10 1 175 351 651162829 651163006 2.500000e-67 267.0
15 TraesCS1A01G148300 chr3A 96.951 164 5 0 179 342 743112899 743112736 4.150000e-70 276.0
16 TraesCS1A01G148300 chr7A 95.349 172 8 0 171 342 630046337 630046166 1.490000e-69 274.0
17 TraesCS1A01G148300 chr3B 95.238 168 8 0 4018 4185 672963606 672963439 2.500000e-67 267.0
18 TraesCS1A01G148300 chr3B 94.643 168 9 0 4017 4184 655849587 655849420 1.160000e-65 261.0
19 TraesCS1A01G148300 chr3B 94.643 168 9 0 4018 4185 673063466 673063299 1.160000e-65 261.0
20 TraesCS1A01G148300 chr6B 95.706 163 7 0 4017 4179 545182580 545182742 3.230000e-66 263.0
21 TraesCS1A01G148300 chr5D 94.220 173 9 1 4015 4187 321901911 321902082 3.230000e-66 263.0
22 TraesCS1A01G148300 chr5D 95.152 165 8 0 4017 4181 368995357 368995521 1.160000e-65 261.0
23 TraesCS1A01G148300 chr5D 94.643 168 9 0 4018 4185 542970947 542971114 1.160000e-65 261.0
24 TraesCS1A01G148300 chr3D 88.832 197 19 3 3988 4183 327121773 327121967 5.440000e-59 239.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G148300 chr1A 255871277 255875488 4211 False 7779.000 7779 100.0000 1 4212 1 chr1A.!!$F1 4211
1 TraesCS1A01G148300 chr1D 201590136 201593732 3596 False 2902.500 5522 96.1430 3 3772 2 chr1D.!!$F2 3769
2 TraesCS1A01G148300 chr1B 289306114 289309836 3722 False 1441.925 5337 94.8195 1 3804 4 chr1B.!!$F1 3803

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
189 191 0.988832 TTGCCAAATACTCCCTCCGT 59.011 50.000 0.00 0.0 0.00 4.69 F
1029 1058 0.243907 ACGATCAGTCCTTCACCGTG 59.756 55.000 0.00 0.0 0.00 4.94 F
1326 1356 1.079127 CCCCGTTGCAGTACAGAGG 60.079 63.158 0.00 0.0 0.00 3.69 F
1446 1476 1.134699 GCTTGGCCTGGCTTAAATTCC 60.135 52.381 19.68 0.0 0.00 3.01 F
2419 2469 0.036294 GACCCAGGGAGGTTTCTTCG 60.036 60.000 14.54 0.0 41.42 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1262 1292 0.749649 CTCCTCTTCTGGATCCCGTG 59.250 60.0 9.90 0.00 35.30 4.94 R
2399 2449 0.036294 GAAGAAACCTCCCTGGGTCG 60.036 60.0 13.56 6.44 38.87 4.79 R
2400 2450 0.036294 CGAAGAAACCTCCCTGGGTC 60.036 60.0 13.56 2.05 38.87 4.46 R
2993 3046 0.108138 CCTCGTGGTTCTGTGATCCC 60.108 60.0 0.00 0.00 0.00 3.85 R
4172 4242 0.036010 ATTGTGAACTGCTCCCTCCG 60.036 55.0 0.00 0.00 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 7.856415 AGGGGCATCTTAGATCTGATAAATAC 58.144 38.462 5.18 0.00 0.00 1.89
66 67 6.422400 GGAAAAATAATCAGTGCGGTGAAAAA 59.578 34.615 0.00 0.00 0.00 1.94
173 175 2.412770 CCAAGATCGCCAAAATTGTTGC 59.587 45.455 0.00 0.00 0.00 4.17
176 178 2.036992 AGATCGCCAAAATTGTTGCCAA 59.963 40.909 0.00 0.00 34.45 4.52
177 179 2.315925 TCGCCAAAATTGTTGCCAAA 57.684 40.000 0.00 0.00 33.44 3.28
178 180 2.843701 TCGCCAAAATTGTTGCCAAAT 58.156 38.095 0.00 0.00 33.44 2.32
179 181 3.995199 TCGCCAAAATTGTTGCCAAATA 58.005 36.364 0.00 0.00 33.44 1.40
180 182 3.743396 TCGCCAAAATTGTTGCCAAATAC 59.257 39.130 0.00 0.00 33.44 1.89
181 183 3.745458 CGCCAAAATTGTTGCCAAATACT 59.255 39.130 0.00 0.00 33.44 2.12
182 184 4.143137 CGCCAAAATTGTTGCCAAATACTC 60.143 41.667 0.00 0.00 33.44 2.59
183 185 4.154015 GCCAAAATTGTTGCCAAATACTCC 59.846 41.667 0.00 0.00 33.44 3.85
184 186 4.694982 CCAAAATTGTTGCCAAATACTCCC 59.305 41.667 0.00 0.00 33.44 4.30
185 187 5.512921 CCAAAATTGTTGCCAAATACTCCCT 60.513 40.000 0.00 0.00 33.44 4.20
186 188 5.405935 AAATTGTTGCCAAATACTCCCTC 57.594 39.130 0.00 0.00 33.44 4.30
187 189 2.507407 TGTTGCCAAATACTCCCTCC 57.493 50.000 0.00 0.00 0.00 4.30
188 190 1.339631 TGTTGCCAAATACTCCCTCCG 60.340 52.381 0.00 0.00 0.00 4.63
189 191 0.988832 TTGCCAAATACTCCCTCCGT 59.011 50.000 0.00 0.00 0.00 4.69
190 192 0.988832 TGCCAAATACTCCCTCCGTT 59.011 50.000 0.00 0.00 0.00 4.44
191 193 1.353022 TGCCAAATACTCCCTCCGTTT 59.647 47.619 0.00 0.00 0.00 3.60
192 194 2.014857 GCCAAATACTCCCTCCGTTTC 58.985 52.381 0.00 0.00 0.00 2.78
193 195 2.355818 GCCAAATACTCCCTCCGTTTCT 60.356 50.000 0.00 0.00 0.00 2.52
194 196 3.118519 GCCAAATACTCCCTCCGTTTCTA 60.119 47.826 0.00 0.00 0.00 2.10
195 197 4.624604 GCCAAATACTCCCTCCGTTTCTAA 60.625 45.833 0.00 0.00 0.00 2.10
196 198 5.493809 CCAAATACTCCCTCCGTTTCTAAA 58.506 41.667 0.00 0.00 0.00 1.85
197 199 6.120220 CCAAATACTCCCTCCGTTTCTAAAT 58.880 40.000 0.00 0.00 0.00 1.40
198 200 7.277396 CCAAATACTCCCTCCGTTTCTAAATA 58.723 38.462 0.00 0.00 0.00 1.40
199 201 7.937394 CCAAATACTCCCTCCGTTTCTAAATAT 59.063 37.037 0.00 0.00 0.00 1.28
200 202 9.338622 CAAATACTCCCTCCGTTTCTAAATATT 57.661 33.333 0.00 0.00 0.00 1.28
201 203 9.916360 AAATACTCCCTCCGTTTCTAAATATTT 57.084 29.630 5.89 5.89 0.00 1.40
202 204 8.904099 ATACTCCCTCCGTTTCTAAATATTTG 57.096 34.615 11.05 1.65 0.00 2.32
203 205 6.718294 ACTCCCTCCGTTTCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
204 206 6.822170 ACTCCCTCCGTTTCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
205 207 6.954232 TCCCTCCGTTTCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
206 208 7.399634 TCCCTCCGTTTCTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
207 209 7.886446 TCCCTCCGTTTCTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
208 210 8.520351 CCCTCCGTTTCTAAATATTTGTCTTTT 58.480 33.333 11.05 0.00 0.00 2.27
209 211 9.908152 CCTCCGTTTCTAAATATTTGTCTTTTT 57.092 29.630 11.05 0.00 0.00 1.94
211 213 9.685828 TCCGTTTCTAAATATTTGTCTTTTTGG 57.314 29.630 11.05 3.95 0.00 3.28
212 214 9.685828 CCGTTTCTAAATATTTGTCTTTTTGGA 57.314 29.630 11.05 0.00 0.00 3.53
226 228 9.883142 TTGTCTTTTTGGACATTTTAAATGACT 57.117 25.926 22.53 2.73 44.30 3.41
282 284 8.885494 AGAGTATAGATTCACTCATTTTGCTC 57.115 34.615 4.70 0.00 42.99 4.26
283 285 7.930865 AGAGTATAGATTCACTCATTTTGCTCC 59.069 37.037 4.70 0.00 42.99 4.70
284 286 5.998454 ATAGATTCACTCATTTTGCTCCG 57.002 39.130 0.00 0.00 0.00 4.63
285 287 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
286 288 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
287 289 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
288 290 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
289 291 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
290 292 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
291 293 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
292 294 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
293 295 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
294 296 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
295 297 2.973694 TTTGCTCCGTATGTAGTCCC 57.026 50.000 0.00 0.00 0.00 4.46
296 298 2.154567 TTGCTCCGTATGTAGTCCCT 57.845 50.000 0.00 0.00 0.00 4.20
297 299 2.154567 TGCTCCGTATGTAGTCCCTT 57.845 50.000 0.00 0.00 0.00 3.95
298 300 1.754803 TGCTCCGTATGTAGTCCCTTG 59.245 52.381 0.00 0.00 0.00 3.61
299 301 1.755380 GCTCCGTATGTAGTCCCTTGT 59.245 52.381 0.00 0.00 0.00 3.16
300 302 2.167900 GCTCCGTATGTAGTCCCTTGTT 59.832 50.000 0.00 0.00 0.00 2.83
301 303 3.782046 CTCCGTATGTAGTCCCTTGTTG 58.218 50.000 0.00 0.00 0.00 3.33
302 304 3.433343 TCCGTATGTAGTCCCTTGTTGA 58.567 45.455 0.00 0.00 0.00 3.18
303 305 3.833650 TCCGTATGTAGTCCCTTGTTGAA 59.166 43.478 0.00 0.00 0.00 2.69
304 306 4.283978 TCCGTATGTAGTCCCTTGTTGAAA 59.716 41.667 0.00 0.00 0.00 2.69
305 307 5.046159 TCCGTATGTAGTCCCTTGTTGAAAT 60.046 40.000 0.00 0.00 0.00 2.17
306 308 5.064707 CCGTATGTAGTCCCTTGTTGAAATG 59.935 44.000 0.00 0.00 0.00 2.32
307 309 5.642063 CGTATGTAGTCCCTTGTTGAAATGT 59.358 40.000 0.00 0.00 0.00 2.71
308 310 6.183360 CGTATGTAGTCCCTTGTTGAAATGTC 60.183 42.308 0.00 0.00 0.00 3.06
309 311 5.304686 TGTAGTCCCTTGTTGAAATGTCT 57.695 39.130 0.00 0.00 0.00 3.41
310 312 6.428083 TGTAGTCCCTTGTTGAAATGTCTA 57.572 37.500 0.00 0.00 0.00 2.59
311 313 6.464222 TGTAGTCCCTTGTTGAAATGTCTAG 58.536 40.000 0.00 0.00 0.00 2.43
312 314 5.825593 AGTCCCTTGTTGAAATGTCTAGA 57.174 39.130 0.00 0.00 0.00 2.43
313 315 6.187727 AGTCCCTTGTTGAAATGTCTAGAA 57.812 37.500 0.00 0.00 0.00 2.10
314 316 6.601332 AGTCCCTTGTTGAAATGTCTAGAAA 58.399 36.000 0.00 0.00 0.00 2.52
315 317 6.712547 AGTCCCTTGTTGAAATGTCTAGAAAG 59.287 38.462 0.00 0.00 0.00 2.62
316 318 6.710744 GTCCCTTGTTGAAATGTCTAGAAAGA 59.289 38.462 0.00 0.00 0.00 2.52
333 335 8.248945 TCTAGAAAGACAAGTATTTAGGAACGG 58.751 37.037 0.00 0.00 0.00 4.44
334 336 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
335 337 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
336 338 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
337 339 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
381 398 3.009140 GCACGATGCGAGTCATGG 58.991 61.111 0.00 0.00 35.05 3.66
382 399 3.009140 CACGATGCGAGTCATGGC 58.991 61.111 0.00 0.00 34.68 4.40
383 400 2.583319 ACGATGCGAGTCATGGCG 60.583 61.111 0.00 0.00 34.68 5.69
395 412 2.965831 AGTCATGGCGGTACATACATCT 59.034 45.455 0.00 0.00 0.00 2.90
396 413 3.388024 AGTCATGGCGGTACATACATCTT 59.612 43.478 0.00 0.00 0.00 2.40
397 414 4.587262 AGTCATGGCGGTACATACATCTTA 59.413 41.667 0.00 0.00 0.00 2.10
398 415 5.069914 AGTCATGGCGGTACATACATCTTAA 59.930 40.000 0.00 0.00 0.00 1.85
399 416 5.932303 GTCATGGCGGTACATACATCTTAAT 59.068 40.000 0.00 0.00 0.00 1.40
400 417 6.090898 GTCATGGCGGTACATACATCTTAATC 59.909 42.308 0.00 0.00 0.00 1.75
401 418 5.538849 TGGCGGTACATACATCTTAATCA 57.461 39.130 0.00 0.00 0.00 2.57
402 419 5.919755 TGGCGGTACATACATCTTAATCAA 58.080 37.500 0.00 0.00 0.00 2.57
403 420 5.989168 TGGCGGTACATACATCTTAATCAAG 59.011 40.000 0.00 0.00 0.00 3.02
404 421 6.183360 TGGCGGTACATACATCTTAATCAAGA 60.183 38.462 0.00 0.00 44.77 3.02
405 422 6.704493 GGCGGTACATACATCTTAATCAAGAA 59.296 38.462 0.00 0.00 43.89 2.52
406 423 7.387948 GGCGGTACATACATCTTAATCAAGAAT 59.612 37.037 0.00 0.00 43.89 2.40
407 424 8.774586 GCGGTACATACATCTTAATCAAGAATT 58.225 33.333 0.00 0.00 43.89 2.17
438 465 2.093447 TCTCTCAAGAAAAGATCGGGCC 60.093 50.000 0.00 0.00 0.00 5.80
500 527 4.944962 TTCCTCGCATCATTTTGTGTAG 57.055 40.909 0.00 0.00 0.00 2.74
502 529 2.223340 CCTCGCATCATTTTGTGTAGGC 60.223 50.000 0.00 0.00 0.00 3.93
505 532 3.065233 TCGCATCATTTTGTGTAGGCATC 59.935 43.478 0.00 0.00 0.00 3.91
511 538 4.759693 TCATTTTGTGTAGGCATCGTTTCT 59.240 37.500 0.00 0.00 0.00 2.52
698 725 1.570347 TTTGACCGCGGTACATGTGC 61.570 55.000 34.36 17.77 0.00 4.57
725 752 5.522824 GCTCCTTGTCCTAATTAAGTAACCG 59.477 44.000 0.00 0.00 0.00 4.44
1029 1058 0.243907 ACGATCAGTCCTTCACCGTG 59.756 55.000 0.00 0.00 0.00 4.94
1079 1109 1.753468 GCTCGGTTCTCGGAAATCGC 61.753 60.000 0.00 0.00 39.77 4.58
1208 1238 5.940192 TTGCTAGACAAACAGTTATGTGG 57.060 39.130 0.00 0.00 40.39 4.17
1326 1356 1.079127 CCCCGTTGCAGTACAGAGG 60.079 63.158 0.00 0.00 0.00 3.69
1379 1409 5.220172 GCTTCGTGATCTCGTTAACCTTTAC 60.220 44.000 16.03 0.00 0.00 2.01
1446 1476 1.134699 GCTTGGCCTGGCTTAAATTCC 60.135 52.381 19.68 0.00 0.00 3.01
1651 1682 6.933521 GCTTGATCATGTAGATTGTAGGATGT 59.066 38.462 10.05 0.00 37.00 3.06
1914 1946 2.355837 GACGTGTTCGCTGCCTCA 60.356 61.111 0.00 0.00 41.18 3.86
1942 1974 3.359523 CCTCGTCGTCGTCCACCA 61.360 66.667 1.33 0.00 38.33 4.17
2052 2084 2.626780 CGACTCCACACTCTCGGCA 61.627 63.158 0.00 0.00 0.00 5.69
2118 2150 2.159142 CCTCCCAATAGACTACGCGTTT 60.159 50.000 20.78 4.49 0.00 3.60
2396 2446 4.382320 GGCGACGCAGGGGTGTTA 62.382 66.667 23.09 0.00 38.01 2.41
2397 2447 3.116531 GCGACGCAGGGGTGTTAC 61.117 66.667 16.42 0.00 38.01 2.50
2398 2448 2.807895 CGACGCAGGGGTGTTACG 60.808 66.667 0.00 0.00 38.01 3.18
2399 2449 3.116531 GACGCAGGGGTGTTACGC 61.117 66.667 0.00 0.00 38.01 4.42
2402 2452 3.116531 GCAGGGGTGTTACGCGAC 61.117 66.667 15.93 0.75 31.02 5.19
2403 2453 2.433664 CAGGGGTGTTACGCGACC 60.434 66.667 15.93 10.14 31.02 4.79
2407 2457 2.433664 GGTGTTACGCGACCCAGG 60.434 66.667 15.93 0.00 0.00 4.45
2408 2458 2.433664 GTGTTACGCGACCCAGGG 60.434 66.667 15.93 2.85 0.00 4.45
2409 2459 2.601067 TGTTACGCGACCCAGGGA 60.601 61.111 15.93 0.00 0.00 4.20
2410 2460 2.183555 GTTACGCGACCCAGGGAG 59.816 66.667 15.93 6.95 0.00 4.30
2411 2461 3.072468 TTACGCGACCCAGGGAGG 61.072 66.667 15.93 4.08 37.03 4.30
2412 2462 3.892104 TTACGCGACCCAGGGAGGT 62.892 63.158 15.93 6.61 45.12 3.85
2413 2463 3.892104 TACGCGACCCAGGGAGGTT 62.892 63.158 15.93 0.00 41.42 3.50
2414 2464 4.016706 CGCGACCCAGGGAGGTTT 62.017 66.667 14.54 0.00 41.42 3.27
2415 2465 2.046217 GCGACCCAGGGAGGTTTC 60.046 66.667 14.54 0.00 41.42 2.78
2419 2469 0.036294 GACCCAGGGAGGTTTCTTCG 60.036 60.000 14.54 0.00 41.42 3.79
2420 2470 1.299976 CCCAGGGAGGTTTCTTCGG 59.700 63.158 0.00 0.00 34.66 4.30
2993 3046 3.554692 GAAGCGTCCACGGCGATG 61.555 66.667 16.62 8.29 40.23 3.84
3039 3092 3.570125 CGAGCAGATGGTAAGTCTGGATA 59.430 47.826 5.41 0.00 42.58 2.59
3215 3274 4.698780 CGGTGGAGTCGTGGATATAATCTA 59.301 45.833 0.00 0.00 0.00 1.98
3237 3296 4.353437 ACGACGAACACGAGCCCC 62.353 66.667 0.00 0.00 34.70 5.80
3455 3515 4.749245 ATGTGAGGTTTTAGAGTTTGCG 57.251 40.909 0.00 0.00 0.00 4.85
3473 3533 1.270147 GCGGAGGAGTTGTGTACTTGT 60.270 52.381 0.00 0.00 37.17 3.16
3474 3534 2.805657 GCGGAGGAGTTGTGTACTTGTT 60.806 50.000 0.00 0.00 37.17 2.83
3515 3575 3.713248 ACAGCTTCAGGGATCATGTATCA 59.287 43.478 0.00 0.00 36.20 2.15
3516 3576 4.350225 ACAGCTTCAGGGATCATGTATCAT 59.650 41.667 0.00 0.00 36.20 2.45
3517 3577 5.163120 ACAGCTTCAGGGATCATGTATCATT 60.163 40.000 0.00 0.00 36.20 2.57
3518 3578 5.181433 CAGCTTCAGGGATCATGTATCATTG 59.819 44.000 0.00 0.00 36.20 2.82
3519 3579 5.068636 GCTTCAGGGATCATGTATCATTGT 58.931 41.667 0.00 0.00 36.20 2.71
3520 3580 6.043590 AGCTTCAGGGATCATGTATCATTGTA 59.956 38.462 0.00 0.00 36.20 2.41
3521 3581 6.883217 GCTTCAGGGATCATGTATCATTGTAT 59.117 38.462 0.00 0.00 36.20 2.29
3522 3582 7.065563 GCTTCAGGGATCATGTATCATTGTATC 59.934 40.741 0.00 0.00 36.20 2.24
3594 3654 1.067516 GGTAGACTATACCGGCGCAAA 59.932 52.381 10.83 0.00 0.00 3.68
3598 3658 4.062677 AGACTATACCGGCGCAAATTTA 57.937 40.909 10.83 0.00 0.00 1.40
3603 3663 6.566141 ACTATACCGGCGCAAATTTATTTTT 58.434 32.000 10.83 0.00 0.00 1.94
3667 3737 8.986477 AGATTTACCACTAAAATGACAATTGC 57.014 30.769 5.05 0.00 0.00 3.56
3669 3739 8.761575 ATTTACCACTAAAATGACAATTGCAG 57.238 30.769 5.05 0.00 0.00 4.41
3673 3743 5.346822 CCACTAAAATGACAATTGCAGAAGC 59.653 40.000 5.05 0.00 42.57 3.86
3687 3757 2.675317 GCAGAAGCAGAATCGGTGTAGT 60.675 50.000 0.00 0.00 41.58 2.73
3786 3856 1.445066 CGCAGCTCATCGAGTGTGT 60.445 57.895 0.00 0.00 31.39 3.72
3790 3860 0.244994 AGCTCATCGAGTGTGTCCAC 59.755 55.000 0.00 0.00 42.17 4.02
3804 3874 2.558359 GTGTCCACAATTCAAAGAGGGG 59.442 50.000 0.00 0.00 0.00 4.79
3807 3877 2.445145 TCCACAATTCAAAGAGGGGTGA 59.555 45.455 0.00 0.00 0.00 4.02
3808 3878 3.075882 TCCACAATTCAAAGAGGGGTGAT 59.924 43.478 0.00 0.00 0.00 3.06
3809 3879 3.834231 CCACAATTCAAAGAGGGGTGATT 59.166 43.478 0.00 0.00 0.00 2.57
3811 3881 5.221702 CCACAATTCAAAGAGGGGTGATTTT 60.222 40.000 0.00 0.00 0.00 1.82
3830 3900 0.762418 TTTTGTCTCCCGAGGCTCAA 59.238 50.000 15.95 0.00 33.37 3.02
3831 3901 0.321671 TTTGTCTCCCGAGGCTCAAG 59.678 55.000 15.95 8.63 33.37 3.02
3832 3902 1.544825 TTGTCTCCCGAGGCTCAAGG 61.545 60.000 15.95 14.42 33.37 3.61
3833 3903 1.985116 GTCTCCCGAGGCTCAAGGT 60.985 63.158 15.95 0.00 0.00 3.50
3835 3905 1.684049 CTCCCGAGGCTCAAGGTCT 60.684 63.158 15.95 0.00 0.00 3.85
3836 3906 1.671901 CTCCCGAGGCTCAAGGTCTC 61.672 65.000 15.95 0.00 42.80 3.36
3839 3909 1.671901 CCGAGGCTCAAGGTCTCTCC 61.672 65.000 15.95 0.00 43.96 3.71
3840 3910 1.671901 CGAGGCTCAAGGTCTCTCCC 61.672 65.000 15.95 0.00 43.96 4.30
3841 3911 0.616111 GAGGCTCAAGGTCTCTCCCA 60.616 60.000 10.25 0.00 42.91 4.37
3842 3912 0.043940 AGGCTCAAGGTCTCTCCCAT 59.956 55.000 0.00 0.00 36.75 4.00
3844 3914 0.103937 GCTCAAGGTCTCTCCCATCG 59.896 60.000 0.00 0.00 36.75 3.84
3845 3915 0.103937 CTCAAGGTCTCTCCCATCGC 59.896 60.000 0.00 0.00 36.75 4.58
3846 3916 1.144936 CAAGGTCTCTCCCATCGCC 59.855 63.158 0.00 0.00 36.75 5.54
3847 3917 2.427245 AAGGTCTCTCCCATCGCCG 61.427 63.158 0.00 0.00 36.75 6.46
3848 3918 2.833582 GGTCTCTCCCATCGCCGA 60.834 66.667 0.00 0.00 0.00 5.54
3849 3919 2.413765 GTCTCTCCCATCGCCGAC 59.586 66.667 0.00 0.00 0.00 4.79
3851 3921 2.105128 CTCTCCCATCGCCGACAC 59.895 66.667 0.00 0.00 0.00 3.67
3852 3922 3.758088 CTCTCCCATCGCCGACACG 62.758 68.421 0.00 0.00 0.00 4.49
3854 3924 4.124351 TCCCATCGCCGACACGAC 62.124 66.667 0.00 0.00 46.28 4.34
3857 3927 4.429212 CATCGCCGACACGACCCA 62.429 66.667 0.00 0.00 46.28 4.51
3859 3929 3.426117 ATCGCCGACACGACCCATC 62.426 63.158 0.00 0.00 46.28 3.51
3860 3930 4.429212 CGCCGACACGACCCATCA 62.429 66.667 0.00 0.00 34.06 3.07
3861 3931 2.509336 GCCGACACGACCCATCAG 60.509 66.667 0.00 0.00 0.00 2.90
3862 3932 3.001902 GCCGACACGACCCATCAGA 62.002 63.158 0.00 0.00 0.00 3.27
3864 3934 0.249073 CCGACACGACCCATCAGATC 60.249 60.000 0.00 0.00 0.00 2.75
3865 3935 0.455815 CGACACGACCCATCAGATCA 59.544 55.000 0.00 0.00 0.00 2.92
3866 3936 1.799181 CGACACGACCCATCAGATCAC 60.799 57.143 0.00 0.00 0.00 3.06
3867 3937 1.478510 GACACGACCCATCAGATCACT 59.521 52.381 0.00 0.00 0.00 3.41
3868 3938 2.688446 GACACGACCCATCAGATCACTA 59.312 50.000 0.00 0.00 0.00 2.74
3869 3939 2.690497 ACACGACCCATCAGATCACTAG 59.310 50.000 0.00 0.00 0.00 2.57
3870 3940 2.952310 CACGACCCATCAGATCACTAGA 59.048 50.000 0.00 0.00 0.00 2.43
3871 3941 3.571828 CACGACCCATCAGATCACTAGAT 59.428 47.826 0.00 0.00 37.13 1.98
3872 3942 4.038522 CACGACCCATCAGATCACTAGATT 59.961 45.833 0.00 0.00 33.72 2.40
3873 3943 4.038522 ACGACCCATCAGATCACTAGATTG 59.961 45.833 0.00 0.00 33.72 2.67
3874 3944 4.560311 CGACCCATCAGATCACTAGATTGG 60.560 50.000 0.00 1.28 33.72 3.16
3875 3945 4.560739 ACCCATCAGATCACTAGATTGGA 58.439 43.478 0.00 0.00 32.48 3.53
3876 3946 4.971282 ACCCATCAGATCACTAGATTGGAA 59.029 41.667 0.00 0.00 32.48 3.53
3877 3947 5.610132 ACCCATCAGATCACTAGATTGGAAT 59.390 40.000 0.00 0.00 32.48 3.01
3878 3948 5.938710 CCCATCAGATCACTAGATTGGAATG 59.061 44.000 0.00 0.00 32.48 2.67
3879 3949 5.938710 CCATCAGATCACTAGATTGGAATGG 59.061 44.000 0.00 0.00 32.48 3.16
3880 3950 5.557576 TCAGATCACTAGATTGGAATGGG 57.442 43.478 0.00 0.00 33.72 4.00
3881 3951 4.070716 CAGATCACTAGATTGGAATGGGC 58.929 47.826 0.00 0.00 33.72 5.36
3882 3952 3.718434 AGATCACTAGATTGGAATGGGCA 59.282 43.478 0.00 0.00 33.72 5.36
3883 3953 4.166725 AGATCACTAGATTGGAATGGGCAA 59.833 41.667 0.00 0.00 33.72 4.52
3884 3954 3.620488 TCACTAGATTGGAATGGGCAAC 58.380 45.455 0.00 0.00 0.00 4.17
3896 3966 2.973082 GGCAACCTTGGACATGGC 59.027 61.111 0.00 0.00 0.00 4.40
3897 3967 2.568090 GCAACCTTGGACATGGCG 59.432 61.111 0.00 0.00 0.00 5.69
3898 3968 2.268076 GCAACCTTGGACATGGCGT 61.268 57.895 0.00 0.00 0.00 5.68
3899 3969 1.580942 CAACCTTGGACATGGCGTG 59.419 57.895 4.87 4.87 0.00 5.34
3900 3970 0.888736 CAACCTTGGACATGGCGTGA 60.889 55.000 14.82 0.00 0.00 4.35
3901 3971 0.179004 AACCTTGGACATGGCGTGAA 60.179 50.000 14.82 0.00 0.00 3.18
3902 3972 0.606401 ACCTTGGACATGGCGTGAAG 60.606 55.000 14.82 6.68 0.00 3.02
3903 3973 0.606401 CCTTGGACATGGCGTGAAGT 60.606 55.000 14.82 0.00 0.00 3.01
3904 3974 1.338674 CCTTGGACATGGCGTGAAGTA 60.339 52.381 14.82 0.00 0.00 2.24
3905 3975 2.422597 CTTGGACATGGCGTGAAGTAA 58.577 47.619 14.82 2.44 0.00 2.24
3906 3976 1.803334 TGGACATGGCGTGAAGTAAC 58.197 50.000 14.82 0.00 0.00 2.50
3907 3977 1.070914 TGGACATGGCGTGAAGTAACA 59.929 47.619 14.82 0.16 0.00 2.41
3908 3978 2.147958 GGACATGGCGTGAAGTAACAA 58.852 47.619 14.82 0.00 0.00 2.83
3909 3979 2.747446 GGACATGGCGTGAAGTAACAAT 59.253 45.455 14.82 0.00 0.00 2.71
3910 3980 3.936453 GGACATGGCGTGAAGTAACAATA 59.064 43.478 14.82 0.00 0.00 1.90
3911 3981 4.034048 GGACATGGCGTGAAGTAACAATAG 59.966 45.833 14.82 0.00 0.00 1.73
3912 3982 3.938963 ACATGGCGTGAAGTAACAATAGG 59.061 43.478 14.82 0.00 0.00 2.57
3913 3983 3.688694 TGGCGTGAAGTAACAATAGGT 57.311 42.857 0.00 0.00 0.00 3.08
3914 3984 4.010667 TGGCGTGAAGTAACAATAGGTT 57.989 40.909 0.00 0.00 43.62 3.50
3915 3985 4.391155 TGGCGTGAAGTAACAATAGGTTT 58.609 39.130 0.00 0.00 40.96 3.27
3916 3986 4.822896 TGGCGTGAAGTAACAATAGGTTTT 59.177 37.500 0.00 0.00 40.96 2.43
3917 3987 5.049267 TGGCGTGAAGTAACAATAGGTTTTC 60.049 40.000 0.00 0.00 40.96 2.29
3918 3988 5.049267 GGCGTGAAGTAACAATAGGTTTTCA 60.049 40.000 0.00 0.00 40.96 2.69
3919 3989 6.077838 GCGTGAAGTAACAATAGGTTTTCAG 58.922 40.000 0.00 0.00 37.07 3.02
3920 3990 6.073440 GCGTGAAGTAACAATAGGTTTTCAGA 60.073 38.462 0.00 0.00 37.07 3.27
3921 3991 7.360946 GCGTGAAGTAACAATAGGTTTTCAGAT 60.361 37.037 0.00 0.00 37.07 2.90
3922 3992 8.504005 CGTGAAGTAACAATAGGTTTTCAGATT 58.496 33.333 0.00 0.00 37.07 2.40
3927 3997 9.362151 AGTAACAATAGGTTTTCAGATTTTCCA 57.638 29.630 0.00 0.00 40.96 3.53
3928 3998 9.974980 GTAACAATAGGTTTTCAGATTTTCCAA 57.025 29.630 0.00 0.00 40.96 3.53
3930 4000 8.887036 ACAATAGGTTTTCAGATTTTCCAAAC 57.113 30.769 0.00 0.00 0.00 2.93
3931 4001 7.931407 ACAATAGGTTTTCAGATTTTCCAAACC 59.069 33.333 4.28 4.28 44.59 3.27
3933 4003 4.055360 GGTTTTCAGATTTTCCAAACCGG 58.945 43.478 0.00 0.00 37.66 5.28
3934 4004 4.442332 GGTTTTCAGATTTTCCAAACCGGT 60.442 41.667 0.00 0.00 37.66 5.28
3935 4005 5.113383 GTTTTCAGATTTTCCAAACCGGTT 58.887 37.500 15.86 15.86 35.57 4.44
3936 4006 6.274579 GTTTTCAGATTTTCCAAACCGGTTA 58.725 36.000 22.60 3.51 35.57 2.85
3937 4007 6.466885 TTTCAGATTTTCCAAACCGGTTAA 57.533 33.333 22.60 11.36 35.57 2.01
3938 4008 5.441709 TCAGATTTTCCAAACCGGTTAAC 57.558 39.130 22.60 2.15 35.57 2.01
3939 4009 4.278919 TCAGATTTTCCAAACCGGTTAACC 59.721 41.667 22.60 15.13 35.57 2.85
3940 4010 4.279922 CAGATTTTCCAAACCGGTTAACCT 59.720 41.667 22.60 3.72 35.57 3.50
3941 4011 4.897076 AGATTTTCCAAACCGGTTAACCTT 59.103 37.500 22.60 8.15 35.57 3.50
3942 4012 6.016108 CAGATTTTCCAAACCGGTTAACCTTA 60.016 38.462 22.60 5.89 35.57 2.69
3943 4013 6.550481 AGATTTTCCAAACCGGTTAACCTTAA 59.450 34.615 22.60 11.26 35.57 1.85
3944 4014 6.535963 TTTTCCAAACCGGTTAACCTTAAA 57.464 33.333 22.60 13.14 35.57 1.52
3945 4015 6.535963 TTTCCAAACCGGTTAACCTTAAAA 57.464 33.333 22.60 11.29 35.57 1.52
3946 4016 5.512753 TCCAAACCGGTTAACCTTAAAAC 57.487 39.130 22.60 0.00 35.57 2.43
3947 4017 4.036144 TCCAAACCGGTTAACCTTAAAACG 59.964 41.667 22.60 7.09 35.57 3.60
3948 4018 4.202000 CCAAACCGGTTAACCTTAAAACGT 60.202 41.667 22.60 0.00 0.00 3.99
3949 4019 4.811555 AACCGGTTAACCTTAAAACGTC 57.188 40.909 20.78 0.00 0.00 4.34
3950 4020 3.138304 ACCGGTTAACCTTAAAACGTCC 58.862 45.455 22.12 0.00 0.00 4.79
3951 4021 2.157474 CCGGTTAACCTTAAAACGTCCG 59.843 50.000 22.12 4.53 36.00 4.79
3952 4022 2.411418 CGGTTAACCTTAAAACGTCCGC 60.411 50.000 22.12 0.00 0.00 5.54
3953 4023 2.095768 GGTTAACCTTAAAACGTCCGCC 60.096 50.000 17.83 0.00 0.00 6.13
3954 4024 1.807139 TAACCTTAAAACGTCCGCCC 58.193 50.000 0.00 0.00 0.00 6.13
3964 4034 2.447959 GTCCGCCCCTCCCCTTAT 60.448 66.667 0.00 0.00 0.00 1.73
3965 4035 1.152183 GTCCGCCCCTCCCCTTATA 60.152 63.158 0.00 0.00 0.00 0.98
3966 4036 0.546988 GTCCGCCCCTCCCCTTATAT 60.547 60.000 0.00 0.00 0.00 0.86
3967 4037 0.252558 TCCGCCCCTCCCCTTATATC 60.253 60.000 0.00 0.00 0.00 1.63
3968 4038 1.614241 CCGCCCCTCCCCTTATATCG 61.614 65.000 0.00 0.00 0.00 2.92
3969 4039 0.613853 CGCCCCTCCCCTTATATCGA 60.614 60.000 0.00 0.00 0.00 3.59
3971 4041 1.830071 GCCCCTCCCCTTATATCGACA 60.830 57.143 0.00 0.00 0.00 4.35
3974 4044 2.766828 CCCTCCCCTTATATCGACATCC 59.233 54.545 0.00 0.00 0.00 3.51
3975 4045 2.766828 CCTCCCCTTATATCGACATCCC 59.233 54.545 0.00 0.00 0.00 3.85
3981 4051 6.099701 TCCCCTTATATCGACATCCCATAATG 59.900 42.308 0.00 0.00 0.00 1.90
3984 4054 1.442769 ATCGACATCCCATAATGCGC 58.557 50.000 0.00 0.00 0.00 6.09
3987 4057 1.603802 CGACATCCCATAATGCGCTTT 59.396 47.619 9.73 11.90 0.00 3.51
3990 4060 3.023119 ACATCCCATAATGCGCTTTTGA 58.977 40.909 14.18 6.75 0.00 2.69
3994 4064 5.843673 TCCCATAATGCGCTTTTGAATTA 57.156 34.783 14.18 5.98 0.00 1.40
3995 4065 5.830912 TCCCATAATGCGCTTTTGAATTAG 58.169 37.500 14.18 0.93 0.00 1.73
3997 4067 5.916883 CCCATAATGCGCTTTTGAATTAGAG 59.083 40.000 14.18 3.21 0.00 2.43
3998 4068 6.238731 CCCATAATGCGCTTTTGAATTAGAGA 60.239 38.462 14.18 0.00 0.00 3.10
3999 4069 6.634436 CCATAATGCGCTTTTGAATTAGAGAC 59.366 38.462 14.18 0.00 0.00 3.36
4000 4070 4.622701 ATGCGCTTTTGAATTAGAGACC 57.377 40.909 9.73 0.00 0.00 3.85
4003 4073 3.378427 GCGCTTTTGAATTAGAGACCCAT 59.622 43.478 0.00 0.00 0.00 4.00
4004 4074 4.142381 GCGCTTTTGAATTAGAGACCCATT 60.142 41.667 0.00 0.00 0.00 3.16
4007 4077 6.238484 CGCTTTTGAATTAGAGACCCATTAGG 60.238 42.308 0.00 0.00 43.78 2.69
4009 4079 7.201741 GCTTTTGAATTAGAGACCCATTAGGAC 60.202 40.741 0.00 0.00 39.89 3.85
4010 4080 7.510675 TTTGAATTAGAGACCCATTAGGACT 57.489 36.000 0.00 0.00 43.91 3.85
4011 4081 7.510675 TTGAATTAGAGACCCATTAGGACTT 57.489 36.000 0.00 0.00 41.06 3.01
4012 4082 8.618240 TTGAATTAGAGACCCATTAGGACTTA 57.382 34.615 0.00 0.00 41.06 2.24
4013 4083 8.251383 TGAATTAGAGACCCATTAGGACTTAG 57.749 38.462 0.00 0.00 41.06 2.18
4014 4084 7.844779 TGAATTAGAGACCCATTAGGACTTAGT 59.155 37.037 0.00 0.00 41.06 2.24
4015 4085 7.604657 ATTAGAGACCCATTAGGACTTAGTG 57.395 40.000 0.00 0.00 41.06 2.74
4016 4086 4.949121 AGAGACCCATTAGGACTTAGTGT 58.051 43.478 0.00 0.00 41.06 3.55
4017 4087 4.957327 AGAGACCCATTAGGACTTAGTGTC 59.043 45.833 0.00 0.00 41.06 3.67
4018 4088 4.949121 AGACCCATTAGGACTTAGTGTCT 58.051 43.478 0.00 0.00 44.74 3.41
4019 4089 6.068971 AGAGACCCATTAGGACTTAGTGTCTA 60.069 42.308 0.00 0.00 41.06 2.59
4020 4090 5.892686 AGACCCATTAGGACTTAGTGTCTAC 59.107 44.000 0.00 0.00 44.74 2.59
4021 4091 5.840081 ACCCATTAGGACTTAGTGTCTACT 58.160 41.667 0.00 0.00 44.74 2.57
4022 4092 5.892686 ACCCATTAGGACTTAGTGTCTACTC 59.107 44.000 0.00 0.00 44.74 2.59
4023 4093 5.302313 CCCATTAGGACTTAGTGTCTACTCC 59.698 48.000 0.00 0.00 44.74 3.85
4024 4094 5.302313 CCATTAGGACTTAGTGTCTACTCCC 59.698 48.000 0.00 0.00 44.74 4.30
4025 4095 5.793034 TTAGGACTTAGTGTCTACTCCCT 57.207 43.478 0.00 0.00 44.74 4.20
4026 4096 4.239428 AGGACTTAGTGTCTACTCCCTC 57.761 50.000 0.00 0.00 44.74 4.30
4027 4097 3.053470 AGGACTTAGTGTCTACTCCCTCC 60.053 52.174 0.00 0.00 44.74 4.30
4028 4098 2.944349 GACTTAGTGTCTACTCCCTCCG 59.056 54.545 0.00 0.00 42.21 4.63
4029 4099 2.308275 ACTTAGTGTCTACTCCCTCCGT 59.692 50.000 0.00 0.00 38.36 4.69
4030 4100 3.245193 ACTTAGTGTCTACTCCCTCCGTT 60.245 47.826 0.00 0.00 38.36 4.44
4031 4101 2.305858 AGTGTCTACTCCCTCCGTTT 57.694 50.000 0.00 0.00 28.79 3.60
4032 4102 2.169330 AGTGTCTACTCCCTCCGTTTC 58.831 52.381 0.00 0.00 28.79 2.78
4033 4103 2.169330 GTGTCTACTCCCTCCGTTTCT 58.831 52.381 0.00 0.00 0.00 2.52
4034 4104 3.009916 AGTGTCTACTCCCTCCGTTTCTA 59.990 47.826 0.00 0.00 28.79 2.10
4035 4105 3.760684 GTGTCTACTCCCTCCGTTTCTAA 59.239 47.826 0.00 0.00 0.00 2.10
4036 4106 4.219288 GTGTCTACTCCCTCCGTTTCTAAA 59.781 45.833 0.00 0.00 0.00 1.85
4037 4107 5.021458 TGTCTACTCCCTCCGTTTCTAAAT 58.979 41.667 0.00 0.00 0.00 1.40
4038 4108 6.096001 GTGTCTACTCCCTCCGTTTCTAAATA 59.904 42.308 0.00 0.00 0.00 1.40
4039 4109 6.837568 TGTCTACTCCCTCCGTTTCTAAATAT 59.162 38.462 0.00 0.00 0.00 1.28
4040 4110 7.343833 TGTCTACTCCCTCCGTTTCTAAATATT 59.656 37.037 0.00 0.00 0.00 1.28
4041 4111 8.202811 GTCTACTCCCTCCGTTTCTAAATATTT 58.797 37.037 5.89 5.89 0.00 1.40
4042 4112 8.202137 TCTACTCCCTCCGTTTCTAAATATTTG 58.798 37.037 11.05 1.65 0.00 2.32
4043 4113 6.718294 ACTCCCTCCGTTTCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
4044 4114 6.822170 ACTCCCTCCGTTTCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
4045 4115 6.954232 TCCCTCCGTTTCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
4046 4116 7.399634 TCCCTCCGTTTCTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
4047 4117 7.886446 TCCCTCCGTTTCTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
4048 4118 8.520351 CCCTCCGTTTCTAAATATTTGTCTTTT 58.480 33.333 11.05 0.00 0.00 2.27
4049 4119 9.908152 CCTCCGTTTCTAAATATTTGTCTTTTT 57.092 29.630 11.05 0.00 0.00 1.94
4082 4152 8.777865 TTAAATAGGCTATCACATACAGATGC 57.222 34.615 7.63 0.00 36.43 3.91
4083 4153 6.364568 AATAGGCTATCACATACAGATGCA 57.635 37.500 7.63 0.00 36.43 3.96
4084 4154 4.904895 AGGCTATCACATACAGATGCAT 57.095 40.909 0.00 0.00 36.43 3.96
4085 4155 7.666063 ATAGGCTATCACATACAGATGCATA 57.334 36.000 0.00 0.00 36.43 3.14
4086 4156 6.556974 AGGCTATCACATACAGATGCATAT 57.443 37.500 0.00 0.00 36.43 1.78
4087 4157 7.666063 AGGCTATCACATACAGATGCATATA 57.334 36.000 0.00 0.00 36.43 0.86
4088 4158 7.724287 AGGCTATCACATACAGATGCATATAG 58.276 38.462 0.00 0.99 36.43 1.31
4089 4159 7.562821 AGGCTATCACATACAGATGCATATAGA 59.437 37.037 0.00 0.00 36.43 1.98
4090 4160 7.651304 GGCTATCACATACAGATGCATATAGAC 59.349 40.741 0.00 0.00 36.43 2.59
4091 4161 8.193438 GCTATCACATACAGATGCATATAGACA 58.807 37.037 0.00 0.00 36.43 3.41
4124 4194 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
4125 4195 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
4126 4196 5.700832 TGTAGATTCACTCATTTTGCTTCGT 59.299 36.000 0.00 0.00 0.00 3.85
4127 4197 6.871492 TGTAGATTCACTCATTTTGCTTCGTA 59.129 34.615 0.00 0.00 0.00 3.43
4128 4198 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
4129 4199 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
4130 4200 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
4131 4201 5.940192 TCACTCATTTTGCTTCGTATGTT 57.060 34.783 0.00 0.00 0.00 2.71
4132 4202 5.688823 TCACTCATTTTGCTTCGTATGTTG 58.311 37.500 0.00 0.00 0.00 3.33
4133 4203 5.238432 TCACTCATTTTGCTTCGTATGTTGT 59.762 36.000 0.00 0.00 0.00 3.32
4134 4204 5.565259 CACTCATTTTGCTTCGTATGTTGTC 59.435 40.000 0.00 0.00 0.00 3.18
4135 4205 5.238432 ACTCATTTTGCTTCGTATGTTGTCA 59.762 36.000 0.00 0.00 0.00 3.58
4136 4206 5.448438 TCATTTTGCTTCGTATGTTGTCAC 58.552 37.500 0.00 0.00 0.00 3.67
4137 4207 5.238432 TCATTTTGCTTCGTATGTTGTCACT 59.762 36.000 0.00 0.00 0.00 3.41
4138 4208 5.493133 TTTTGCTTCGTATGTTGTCACTT 57.507 34.783 0.00 0.00 0.00 3.16
4139 4209 4.466567 TTGCTTCGTATGTTGTCACTTG 57.533 40.909 0.00 0.00 0.00 3.16
4140 4210 3.462982 TGCTTCGTATGTTGTCACTTGT 58.537 40.909 0.00 0.00 0.00 3.16
4141 4211 3.874543 TGCTTCGTATGTTGTCACTTGTT 59.125 39.130 0.00 0.00 0.00 2.83
4142 4212 4.211389 GCTTCGTATGTTGTCACTTGTTG 58.789 43.478 0.00 0.00 0.00 3.33
4143 4213 4.025229 GCTTCGTATGTTGTCACTTGTTGA 60.025 41.667 0.00 0.00 0.00 3.18
4144 4214 5.503357 GCTTCGTATGTTGTCACTTGTTGAA 60.503 40.000 0.00 0.00 35.39 2.69
4145 4215 6.424176 TTCGTATGTTGTCACTTGTTGAAA 57.576 33.333 0.00 0.00 35.39 2.69
4146 4216 6.612247 TCGTATGTTGTCACTTGTTGAAAT 57.388 33.333 0.00 0.00 35.39 2.17
4147 4217 6.655062 TCGTATGTTGTCACTTGTTGAAATC 58.345 36.000 0.00 0.00 35.39 2.17
4148 4218 6.481976 TCGTATGTTGTCACTTGTTGAAATCT 59.518 34.615 0.00 0.00 35.39 2.40
4149 4219 6.792250 CGTATGTTGTCACTTGTTGAAATCTC 59.208 38.462 0.00 0.00 35.39 2.75
4150 4220 6.949352 ATGTTGTCACTTGTTGAAATCTCT 57.051 33.333 0.00 0.00 35.39 3.10
4151 4221 8.988934 GTATGTTGTCACTTGTTGAAATCTCTA 58.011 33.333 0.00 0.00 35.39 2.43
4152 4222 7.482654 TGTTGTCACTTGTTGAAATCTCTAG 57.517 36.000 0.00 0.00 35.39 2.43
4153 4223 7.272244 TGTTGTCACTTGTTGAAATCTCTAGA 58.728 34.615 0.00 0.00 35.39 2.43
4154 4224 7.768582 TGTTGTCACTTGTTGAAATCTCTAGAA 59.231 33.333 0.00 0.00 35.39 2.10
4155 4225 8.612619 GTTGTCACTTGTTGAAATCTCTAGAAA 58.387 33.333 0.00 0.00 35.39 2.52
4156 4226 8.370493 TGTCACTTGTTGAAATCTCTAGAAAG 57.630 34.615 0.00 0.00 35.39 2.62
4157 4227 8.204160 TGTCACTTGTTGAAATCTCTAGAAAGA 58.796 33.333 0.00 0.00 35.39 2.52
4158 4228 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
4159 4229 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
4160 4230 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
4161 4231 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
4174 4244 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
4175 4245 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
4176 4246 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
4177 4247 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
4178 4248 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
4179 4249 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
4180 4250 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
4181 4251 4.353383 AATATTTAGGAACGGAGGGAGC 57.647 45.455 0.00 0.00 0.00 4.70
4182 4252 1.580059 ATTTAGGAACGGAGGGAGCA 58.420 50.000 0.00 0.00 0.00 4.26
4183 4253 0.902531 TTTAGGAACGGAGGGAGCAG 59.097 55.000 0.00 0.00 0.00 4.24
4184 4254 0.252103 TTAGGAACGGAGGGAGCAGT 60.252 55.000 0.00 0.00 0.00 4.40
4185 4255 0.252103 TAGGAACGGAGGGAGCAGTT 60.252 55.000 0.00 0.00 0.00 3.16
4186 4256 1.079057 GGAACGGAGGGAGCAGTTC 60.079 63.158 0.00 0.00 40.64 3.01
4187 4257 1.671742 GAACGGAGGGAGCAGTTCA 59.328 57.895 0.00 0.00 40.91 3.18
4188 4258 0.670854 GAACGGAGGGAGCAGTTCAC 60.671 60.000 0.00 0.00 40.91 3.18
4189 4259 1.407656 AACGGAGGGAGCAGTTCACA 61.408 55.000 0.00 0.00 0.00 3.58
4190 4260 1.371183 CGGAGGGAGCAGTTCACAA 59.629 57.895 0.00 0.00 0.00 3.33
4191 4261 0.036010 CGGAGGGAGCAGTTCACAAT 60.036 55.000 0.00 0.00 0.00 2.71
4192 4262 1.611673 CGGAGGGAGCAGTTCACAATT 60.612 52.381 0.00 0.00 0.00 2.32
4193 4263 2.519013 GGAGGGAGCAGTTCACAATTT 58.481 47.619 0.00 0.00 0.00 1.82
4194 4264 2.489722 GGAGGGAGCAGTTCACAATTTC 59.510 50.000 0.00 0.00 0.00 2.17
4195 4265 3.149196 GAGGGAGCAGTTCACAATTTCA 58.851 45.455 0.00 0.00 0.00 2.69
4196 4266 2.887152 AGGGAGCAGTTCACAATTTCAC 59.113 45.455 0.00 0.00 0.00 3.18
4197 4267 2.622942 GGGAGCAGTTCACAATTTCACA 59.377 45.455 0.00 0.00 0.00 3.58
4198 4268 3.256631 GGGAGCAGTTCACAATTTCACAT 59.743 43.478 0.00 0.00 0.00 3.21
4199 4269 4.458989 GGGAGCAGTTCACAATTTCACATA 59.541 41.667 0.00 0.00 0.00 2.29
4200 4270 5.126061 GGGAGCAGTTCACAATTTCACATAT 59.874 40.000 0.00 0.00 0.00 1.78
4201 4271 6.318648 GGGAGCAGTTCACAATTTCACATATA 59.681 38.462 0.00 0.00 0.00 0.86
4202 4272 7.013655 GGGAGCAGTTCACAATTTCACATATAT 59.986 37.037 0.00 0.00 0.00 0.86
4203 4273 7.859377 GGAGCAGTTCACAATTTCACATATATG 59.141 37.037 11.29 11.29 0.00 1.78
4204 4274 7.198390 AGCAGTTCACAATTTCACATATATGC 58.802 34.615 12.79 0.00 0.00 3.14
4205 4275 6.974048 GCAGTTCACAATTTCACATATATGCA 59.026 34.615 12.79 0.00 0.00 3.96
4206 4276 7.488792 GCAGTTCACAATTTCACATATATGCAA 59.511 33.333 12.79 3.30 0.00 4.08
4207 4277 8.800972 CAGTTCACAATTTCACATATATGCAAC 58.199 33.333 12.79 1.54 0.00 4.17
4208 4278 8.742777 AGTTCACAATTTCACATATATGCAACT 58.257 29.630 12.79 0.00 0.00 3.16
4209 4279 9.013490 GTTCACAATTTCACATATATGCAACTC 57.987 33.333 12.79 0.00 0.00 3.01
4210 4280 8.278729 TCACAATTTCACATATATGCAACTCA 57.721 30.769 12.79 0.00 0.00 3.41
4211 4281 8.905850 TCACAATTTCACATATATGCAACTCAT 58.094 29.630 12.79 0.00 39.17 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 6.365970 TTTATCAGATCTAAGATGCCCCTC 57.634 41.667 0.00 0.00 0.00 4.30
37 38 4.142182 ACCGCACTGATTATTTTTCCATGG 60.142 41.667 4.97 4.97 0.00 3.66
66 67 3.192466 ACTCGTTTTGCGTCTAGTTGTT 58.808 40.909 0.00 0.00 42.13 2.83
173 175 3.629142 AGAAACGGAGGGAGTATTTGG 57.371 47.619 0.00 0.00 0.00 3.28
176 178 9.338622 CAAATATTTAGAAACGGAGGGAGTATT 57.661 33.333 0.00 0.00 0.00 1.89
177 179 8.491958 ACAAATATTTAGAAACGGAGGGAGTAT 58.508 33.333 0.00 0.00 0.00 2.12
178 180 7.854337 ACAAATATTTAGAAACGGAGGGAGTA 58.146 34.615 0.00 0.00 0.00 2.59
179 181 6.718294 ACAAATATTTAGAAACGGAGGGAGT 58.282 36.000 0.00 0.00 0.00 3.85
180 182 7.048512 AGACAAATATTTAGAAACGGAGGGAG 58.951 38.462 0.00 0.00 0.00 4.30
181 183 6.954232 AGACAAATATTTAGAAACGGAGGGA 58.046 36.000 0.00 0.00 0.00 4.20
182 184 7.625828 AAGACAAATATTTAGAAACGGAGGG 57.374 36.000 0.00 0.00 0.00 4.30
183 185 9.908152 AAAAAGACAAATATTTAGAAACGGAGG 57.092 29.630 0.00 0.00 0.00 4.30
185 187 9.685828 CCAAAAAGACAAATATTTAGAAACGGA 57.314 29.630 0.00 0.00 0.00 4.69
186 188 9.685828 TCCAAAAAGACAAATATTTAGAAACGG 57.314 29.630 0.00 0.00 0.00 4.44
256 258 9.973450 GAGCAAAATGAGTGAATCTATACTCTA 57.027 33.333 0.00 0.00 42.86 2.43
257 259 7.930865 GGAGCAAAATGAGTGAATCTATACTCT 59.069 37.037 0.00 0.00 42.86 3.24
258 260 7.095857 CGGAGCAAAATGAGTGAATCTATACTC 60.096 40.741 0.00 0.00 42.77 2.59
259 261 6.703607 CGGAGCAAAATGAGTGAATCTATACT 59.296 38.462 0.00 0.00 0.00 2.12
260 262 6.480320 ACGGAGCAAAATGAGTGAATCTATAC 59.520 38.462 0.00 0.00 0.00 1.47
261 263 6.582636 ACGGAGCAAAATGAGTGAATCTATA 58.417 36.000 0.00 0.00 0.00 1.31
262 264 5.431765 ACGGAGCAAAATGAGTGAATCTAT 58.568 37.500 0.00 0.00 0.00 1.98
263 265 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
264 266 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
265 267 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
266 268 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
267 269 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
268 270 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
269 271 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
270 272 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
271 273 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
272 274 4.439057 GGACTACATACGGAGCAAAATGA 58.561 43.478 0.00 0.00 0.00 2.57
273 275 3.560068 GGGACTACATACGGAGCAAAATG 59.440 47.826 0.00 0.00 0.00 2.32
274 276 3.454812 AGGGACTACATACGGAGCAAAAT 59.545 43.478 0.00 0.00 36.02 1.82
275 277 2.835764 AGGGACTACATACGGAGCAAAA 59.164 45.455 0.00 0.00 36.02 2.44
276 278 2.463752 AGGGACTACATACGGAGCAAA 58.536 47.619 0.00 0.00 36.02 3.68
277 279 2.154567 AGGGACTACATACGGAGCAA 57.845 50.000 0.00 0.00 36.02 3.91
278 280 1.754803 CAAGGGACTACATACGGAGCA 59.245 52.381 0.00 0.00 38.49 4.26
279 281 1.755380 ACAAGGGACTACATACGGAGC 59.245 52.381 0.00 0.00 38.49 4.70
280 282 3.446161 TCAACAAGGGACTACATACGGAG 59.554 47.826 0.00 0.00 38.49 4.63
281 283 3.433343 TCAACAAGGGACTACATACGGA 58.567 45.455 0.00 0.00 38.49 4.69
282 284 3.880047 TCAACAAGGGACTACATACGG 57.120 47.619 0.00 0.00 38.49 4.02
283 285 5.642063 ACATTTCAACAAGGGACTACATACG 59.358 40.000 0.00 0.00 38.49 3.06
284 286 6.879458 AGACATTTCAACAAGGGACTACATAC 59.121 38.462 0.00 0.00 38.49 2.39
285 287 7.016153 AGACATTTCAACAAGGGACTACATA 57.984 36.000 0.00 0.00 38.49 2.29
286 288 5.880901 AGACATTTCAACAAGGGACTACAT 58.119 37.500 0.00 0.00 38.49 2.29
287 289 5.304686 AGACATTTCAACAAGGGACTACA 57.695 39.130 0.00 0.00 38.49 2.74
288 290 6.698380 TCTAGACATTTCAACAAGGGACTAC 58.302 40.000 0.00 0.00 38.49 2.73
289 291 6.928348 TCTAGACATTTCAACAAGGGACTA 57.072 37.500 0.00 0.00 38.49 2.59
291 293 6.710744 TCTTTCTAGACATTTCAACAAGGGAC 59.289 38.462 0.00 0.00 0.00 4.46
292 294 6.837312 TCTTTCTAGACATTTCAACAAGGGA 58.163 36.000 0.00 0.00 0.00 4.20
307 309 8.248945 CCGTTCCTAAATACTTGTCTTTCTAGA 58.751 37.037 0.00 0.00 0.00 2.43
308 310 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
309 311 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
310 312 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
311 313 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
312 314 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
313 315 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
314 316 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
315 317 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
316 318 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
317 319 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
318 320 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
319 321 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
320 322 4.646492 TGTACTCCCTCCGTTCCTAAATAC 59.354 45.833 0.00 0.00 0.00 1.89
321 323 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
322 324 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
323 325 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
324 326 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
325 327 4.404640 CATATGTACTCCCTCCGTTCCTA 58.595 47.826 0.00 0.00 0.00 2.94
326 328 3.231818 CATATGTACTCCCTCCGTTCCT 58.768 50.000 0.00 0.00 0.00 3.36
327 329 2.299297 CCATATGTACTCCCTCCGTTCC 59.701 54.545 1.24 0.00 0.00 3.62
328 330 3.228453 TCCATATGTACTCCCTCCGTTC 58.772 50.000 1.24 0.00 0.00 3.95
329 331 3.323774 TCCATATGTACTCCCTCCGTT 57.676 47.619 1.24 0.00 0.00 4.44
330 332 3.432378 GATCCATATGTACTCCCTCCGT 58.568 50.000 1.24 0.00 0.00 4.69
331 333 2.423892 CGATCCATATGTACTCCCTCCG 59.576 54.545 1.24 0.00 0.00 4.63
332 334 2.166664 GCGATCCATATGTACTCCCTCC 59.833 54.545 1.24 0.00 0.00 4.30
333 335 3.093057 AGCGATCCATATGTACTCCCTC 58.907 50.000 1.24 0.00 0.00 4.30
334 336 3.176924 AGCGATCCATATGTACTCCCT 57.823 47.619 1.24 0.00 0.00 4.20
335 337 3.181485 GCTAGCGATCCATATGTACTCCC 60.181 52.174 0.00 0.00 0.00 4.30
336 338 3.697045 AGCTAGCGATCCATATGTACTCC 59.303 47.826 9.55 0.00 0.00 3.85
337 339 4.974368 AGCTAGCGATCCATATGTACTC 57.026 45.455 9.55 0.00 0.00 2.59
369 386 1.227263 GTACCGCCATGACTCGCAT 60.227 57.895 0.00 0.00 37.85 4.73
370 387 1.955495 ATGTACCGCCATGACTCGCA 61.955 55.000 0.00 0.00 0.00 5.10
371 388 0.031585 TATGTACCGCCATGACTCGC 59.968 55.000 0.00 0.00 0.00 5.03
372 389 1.066454 TGTATGTACCGCCATGACTCG 59.934 52.381 0.00 0.00 0.00 4.18
373 390 2.882927 TGTATGTACCGCCATGACTC 57.117 50.000 0.00 0.00 0.00 3.36
374 391 2.965831 AGATGTATGTACCGCCATGACT 59.034 45.455 0.00 0.00 0.00 3.41
375 392 3.386768 AGATGTATGTACCGCCATGAC 57.613 47.619 0.00 0.00 0.00 3.06
376 393 5.538849 TTAAGATGTATGTACCGCCATGA 57.461 39.130 0.00 0.00 0.00 3.07
377 394 5.931724 TGATTAAGATGTATGTACCGCCATG 59.068 40.000 0.00 0.00 0.00 3.66
378 395 6.109156 TGATTAAGATGTATGTACCGCCAT 57.891 37.500 0.00 0.00 0.00 4.40
379 396 5.538849 TGATTAAGATGTATGTACCGCCA 57.461 39.130 0.00 0.00 0.00 5.69
380 397 6.220930 TCTTGATTAAGATGTATGTACCGCC 58.779 40.000 0.00 0.00 37.99 6.13
381 398 7.709269 TTCTTGATTAAGATGTATGTACCGC 57.291 36.000 0.11 0.00 42.25 5.68
395 412 9.699410 AGAGAGAGAGAGAGAATTCTTGATTAA 57.301 33.333 9.87 0.00 32.53 1.40
396 413 9.342308 GAGAGAGAGAGAGAGAATTCTTGATTA 57.658 37.037 9.87 0.00 32.53 1.75
397 414 7.835682 TGAGAGAGAGAGAGAGAATTCTTGATT 59.164 37.037 9.87 0.00 32.53 2.57
398 415 7.348815 TGAGAGAGAGAGAGAGAATTCTTGAT 58.651 38.462 9.87 0.00 32.53 2.57
399 416 6.720309 TGAGAGAGAGAGAGAGAATTCTTGA 58.280 40.000 9.87 0.00 32.53 3.02
400 417 7.337689 TCTTGAGAGAGAGAGAGAGAATTCTTG 59.662 40.741 9.87 0.00 32.53 3.02
401 418 7.405292 TCTTGAGAGAGAGAGAGAGAATTCTT 58.595 38.462 9.87 0.00 32.53 2.52
402 419 6.962182 TCTTGAGAGAGAGAGAGAGAATTCT 58.038 40.000 7.95 7.95 36.01 2.40
403 420 7.630242 TTCTTGAGAGAGAGAGAGAGAATTC 57.370 40.000 0.00 0.00 32.44 2.17
404 421 8.421249 TTTTCTTGAGAGAGAGAGAGAGAATT 57.579 34.615 0.00 0.00 32.44 2.17
405 422 7.890127 TCTTTTCTTGAGAGAGAGAGAGAGAAT 59.110 37.037 0.00 0.00 32.44 2.40
406 423 7.230747 TCTTTTCTTGAGAGAGAGAGAGAGAA 58.769 38.462 0.00 0.00 32.44 2.87
407 424 6.778821 TCTTTTCTTGAGAGAGAGAGAGAGA 58.221 40.000 0.00 0.00 32.44 3.10
408 425 7.466455 CGATCTTTTCTTGAGAGAGAGAGAGAG 60.466 44.444 0.00 0.00 32.76 3.20
409 426 6.316140 CGATCTTTTCTTGAGAGAGAGAGAGA 59.684 42.308 0.00 0.00 32.76 3.10
410 427 6.458751 CCGATCTTTTCTTGAGAGAGAGAGAG 60.459 46.154 0.00 0.00 32.76 3.20
500 527 1.153353 TTTGACCGAGAAACGATGCC 58.847 50.000 0.00 0.00 45.77 4.40
502 529 3.183237 GGTTTTGACCGAGAAACGATG 57.817 47.619 0.00 0.00 45.77 3.84
698 725 2.218953 TAATTAGGACAAGGAGCGCG 57.781 50.000 0.00 0.00 0.00 6.86
701 728 5.522824 CGGTTACTTAATTAGGACAAGGAGC 59.477 44.000 0.98 0.00 0.00 4.70
725 752 1.702022 TAGGACAATTAGGCGGCCCC 61.702 60.000 17.02 7.81 0.00 5.80
881 908 4.162131 GGAAGAGGAAGAGATGAGAAGCTT 59.838 45.833 0.00 0.00 0.00 3.74
1090 1120 4.201980 CGGATCATCATCAAAACATGCAGT 60.202 41.667 0.00 0.00 0.00 4.40
1177 1207 7.138692 ACTGTTTGTCTAGCAAAGATCATTC 57.861 36.000 11.13 1.89 46.50 2.67
1208 1238 5.092781 CACCTAAACAATTATTGCACCGTC 58.907 41.667 4.68 0.00 0.00 4.79
1262 1292 0.749649 CTCCTCTTCTGGATCCCGTG 59.250 60.000 9.90 0.00 35.30 4.94
1446 1476 5.823045 GGGAATGTTACTGTTAAGGATGAGG 59.177 44.000 0.00 0.00 0.00 3.86
1494 1525 3.522553 GAACGGATAGAACAGTGGAAGG 58.477 50.000 0.00 0.00 0.00 3.46
1869 1901 1.006571 GTTCACCGCACCGAAGAGA 60.007 57.895 0.00 0.00 0.00 3.10
1942 1974 3.386237 GCAGAGAGGAGGCGTGGT 61.386 66.667 0.00 0.00 0.00 4.16
2034 2066 2.179517 GCCGAGAGTGTGGAGTCG 59.820 66.667 0.00 0.00 0.00 4.18
2052 2084 0.968393 GCTGGTCTTCCTCGAGGAGT 60.968 60.000 31.81 0.00 46.36 3.85
2391 2441 2.433664 CCCTGGGTCGCGTAACAC 60.434 66.667 5.77 0.00 0.00 3.32
2392 2442 2.601067 TCCCTGGGTCGCGTAACA 60.601 61.111 13.56 2.38 0.00 2.41
2395 2445 3.892104 AACCTCCCTGGGTCGCGTA 62.892 63.158 13.56 0.00 38.87 4.42
2397 2447 3.952628 GAAACCTCCCTGGGTCGCG 62.953 68.421 13.56 0.00 38.87 5.87
2398 2448 2.046217 GAAACCTCCCTGGGTCGC 60.046 66.667 13.56 0.00 38.87 5.19
2399 2449 0.036294 GAAGAAACCTCCCTGGGTCG 60.036 60.000 13.56 6.44 38.87 4.79
2400 2450 0.036294 CGAAGAAACCTCCCTGGGTC 60.036 60.000 13.56 2.05 38.87 4.46
2401 2451 1.489560 CCGAAGAAACCTCCCTGGGT 61.490 60.000 13.56 0.00 42.05 4.51
2402 2452 1.299976 CCGAAGAAACCTCCCTGGG 59.700 63.158 6.33 6.33 41.11 4.45
2403 2453 1.377333 GCCGAAGAAACCTCCCTGG 60.377 63.158 0.00 0.00 42.93 4.45
2404 2454 1.741770 CGCCGAAGAAACCTCCCTG 60.742 63.158 0.00 0.00 0.00 4.45
2405 2455 2.663196 CGCCGAAGAAACCTCCCT 59.337 61.111 0.00 0.00 0.00 4.20
2406 2456 2.436115 CCGCCGAAGAAACCTCCC 60.436 66.667 0.00 0.00 0.00 4.30
2407 2457 3.125573 GCCGCCGAAGAAACCTCC 61.126 66.667 0.00 0.00 0.00 4.30
2408 2458 3.488090 CGCCGCCGAAGAAACCTC 61.488 66.667 0.00 0.00 36.29 3.85
2600 2650 2.950309 GCTCTGTCCTACTACGGATTGA 59.050 50.000 0.00 0.00 34.32 2.57
2606 2656 2.033550 GGTCATGCTCTGTCCTACTACG 59.966 54.545 0.00 0.00 31.12 3.51
2993 3046 0.108138 CCTCGTGGTTCTGTGATCCC 60.108 60.000 0.00 0.00 0.00 3.85
3039 3092 1.952296 GGAGCTGGCGATTGATGAATT 59.048 47.619 0.00 0.00 0.00 2.17
3215 3274 0.933509 GCTCGTGTTCGTCGTGAGTT 60.934 55.000 0.00 0.00 38.33 3.01
3237 3296 2.763448 TGGGGAAAAATGGAATTAGCGG 59.237 45.455 0.00 0.00 33.67 5.52
3238 3297 4.180817 GTTGGGGAAAAATGGAATTAGCG 58.819 43.478 0.00 0.00 33.67 4.26
3455 3515 5.830000 AAAAACAAGTACACAACTCCTCC 57.170 39.130 0.00 0.00 37.50 4.30
3515 3575 5.649831 GGAAAAGAGCAAGACCAGATACAAT 59.350 40.000 0.00 0.00 0.00 2.71
3516 3576 5.003804 GGAAAAGAGCAAGACCAGATACAA 58.996 41.667 0.00 0.00 0.00 2.41
3517 3577 4.041567 TGGAAAAGAGCAAGACCAGATACA 59.958 41.667 0.00 0.00 0.00 2.29
3518 3578 4.579869 TGGAAAAGAGCAAGACCAGATAC 58.420 43.478 0.00 0.00 0.00 2.24
3519 3579 4.908601 TGGAAAAGAGCAAGACCAGATA 57.091 40.909 0.00 0.00 0.00 1.98
3520 3580 3.795688 TGGAAAAGAGCAAGACCAGAT 57.204 42.857 0.00 0.00 0.00 2.90
3521 3581 3.576078 TTGGAAAAGAGCAAGACCAGA 57.424 42.857 0.00 0.00 0.00 3.86
3522 3582 4.279169 TGAATTGGAAAAGAGCAAGACCAG 59.721 41.667 0.00 0.00 0.00 4.00
3667 3737 2.926200 CACTACACCGATTCTGCTTCTG 59.074 50.000 0.00 0.00 0.00 3.02
3669 3739 2.668457 CACACTACACCGATTCTGCTTC 59.332 50.000 0.00 0.00 0.00 3.86
3673 3743 2.251040 CGACACACTACACCGATTCTG 58.749 52.381 0.00 0.00 0.00 3.02
3677 3747 0.242825 CACCGACACACTACACCGAT 59.757 55.000 0.00 0.00 0.00 4.18
3687 3757 0.462375 ACTACAGTTGCACCGACACA 59.538 50.000 0.00 0.00 0.00 3.72
3786 3856 2.445145 TCACCCCTCTTTGAATTGTGGA 59.555 45.455 0.00 0.00 0.00 4.02
3811 3881 0.762418 TTGAGCCTCGGGAGACAAAA 59.238 50.000 0.00 0.00 33.60 2.44
3815 3885 1.950973 GACCTTGAGCCTCGGGAGAC 61.951 65.000 9.97 0.00 33.60 3.36
3817 3887 1.671901 GAGACCTTGAGCCTCGGGAG 61.672 65.000 9.97 0.00 0.00 4.30
3819 3889 1.671901 GAGAGACCTTGAGCCTCGGG 61.672 65.000 2.55 2.55 32.52 5.14
3820 3890 1.671901 GGAGAGACCTTGAGCCTCGG 61.672 65.000 0.00 0.00 35.41 4.63
3821 3891 1.671901 GGGAGAGACCTTGAGCCTCG 61.672 65.000 0.00 0.00 38.98 4.63
3822 3892 0.616111 TGGGAGAGACCTTGAGCCTC 60.616 60.000 0.00 0.00 38.98 4.70
3824 3894 0.467804 GATGGGAGAGACCTTGAGCC 59.532 60.000 0.00 0.00 38.98 4.70
3825 3895 0.103937 CGATGGGAGAGACCTTGAGC 59.896 60.000 0.00 0.00 38.98 4.26
3827 3897 1.330655 GGCGATGGGAGAGACCTTGA 61.331 60.000 0.00 0.00 38.98 3.02
3830 3900 2.835431 CGGCGATGGGAGAGACCT 60.835 66.667 0.00 0.00 38.98 3.85
3831 3901 2.833582 TCGGCGATGGGAGAGACC 60.834 66.667 4.99 0.00 38.08 3.85
3832 3902 2.413765 GTCGGCGATGGGAGAGAC 59.586 66.667 14.79 0.00 0.00 3.36
3833 3903 2.044352 TGTCGGCGATGGGAGAGA 60.044 61.111 14.79 0.00 0.00 3.10
3835 3905 3.822192 CGTGTCGGCGATGGGAGA 61.822 66.667 14.79 0.00 0.00 3.71
3836 3906 3.822192 TCGTGTCGGCGATGGGAG 61.822 66.667 14.79 3.62 35.83 4.30
3840 3910 3.716539 ATGGGTCGTGTCGGCGATG 62.717 63.158 14.79 6.65 43.07 3.84
3841 3911 3.426117 GATGGGTCGTGTCGGCGAT 62.426 63.158 14.79 0.00 43.07 4.58
3842 3912 4.124351 GATGGGTCGTGTCGGCGA 62.124 66.667 4.99 4.99 38.68 5.54
3844 3914 2.298158 ATCTGATGGGTCGTGTCGGC 62.298 60.000 0.00 0.00 0.00 5.54
3845 3915 0.249073 GATCTGATGGGTCGTGTCGG 60.249 60.000 0.00 0.00 0.00 4.79
3846 3916 0.455815 TGATCTGATGGGTCGTGTCG 59.544 55.000 0.00 0.00 0.00 4.35
3847 3917 1.478510 AGTGATCTGATGGGTCGTGTC 59.521 52.381 0.00 0.00 0.00 3.67
3848 3918 1.561643 AGTGATCTGATGGGTCGTGT 58.438 50.000 0.00 0.00 0.00 4.49
3849 3919 2.952310 TCTAGTGATCTGATGGGTCGTG 59.048 50.000 0.00 0.00 0.00 4.35
3851 3921 4.554292 CAATCTAGTGATCTGATGGGTCG 58.446 47.826 0.00 0.00 31.51 4.79
3852 3922 4.590647 TCCAATCTAGTGATCTGATGGGTC 59.409 45.833 0.00 0.00 33.96 4.46
3853 3923 4.560739 TCCAATCTAGTGATCTGATGGGT 58.439 43.478 0.00 0.00 33.96 4.51
3854 3924 5.557576 TTCCAATCTAGTGATCTGATGGG 57.442 43.478 0.00 0.55 33.64 4.00
3855 3925 5.938710 CCATTCCAATCTAGTGATCTGATGG 59.061 44.000 0.00 0.00 31.42 3.51
3856 3926 5.938710 CCCATTCCAATCTAGTGATCTGATG 59.061 44.000 0.00 0.00 31.51 3.07
3857 3927 5.514484 GCCCATTCCAATCTAGTGATCTGAT 60.514 44.000 0.00 0.00 31.51 2.90
3859 3929 4.070716 GCCCATTCCAATCTAGTGATCTG 58.929 47.826 0.00 0.00 31.51 2.90
3860 3930 3.718434 TGCCCATTCCAATCTAGTGATCT 59.282 43.478 0.00 0.00 31.51 2.75
3861 3931 4.090761 TGCCCATTCCAATCTAGTGATC 57.909 45.455 0.00 0.00 31.51 2.92
3862 3932 4.210331 GTTGCCCATTCCAATCTAGTGAT 58.790 43.478 0.00 0.00 33.70 3.06
3864 3934 2.689983 GGTTGCCCATTCCAATCTAGTG 59.310 50.000 0.00 0.00 0.00 2.74
3865 3935 2.582636 AGGTTGCCCATTCCAATCTAGT 59.417 45.455 0.00 0.00 32.17 2.57
3866 3936 3.303351 AGGTTGCCCATTCCAATCTAG 57.697 47.619 0.00 0.00 32.17 2.43
3867 3937 3.364549 CAAGGTTGCCCATTCCAATCTA 58.635 45.455 0.00 0.00 32.74 1.98
3868 3938 2.181975 CAAGGTTGCCCATTCCAATCT 58.818 47.619 0.00 0.00 35.26 2.40
3869 3939 1.207811 CCAAGGTTGCCCATTCCAATC 59.792 52.381 0.00 0.00 0.00 2.67
3870 3940 1.203288 TCCAAGGTTGCCCATTCCAAT 60.203 47.619 0.00 0.00 0.00 3.16
3871 3941 0.189574 TCCAAGGTTGCCCATTCCAA 59.810 50.000 0.00 0.00 0.00 3.53
3872 3942 0.541764 GTCCAAGGTTGCCCATTCCA 60.542 55.000 0.00 0.00 0.00 3.53
3873 3943 0.541764 TGTCCAAGGTTGCCCATTCC 60.542 55.000 0.00 0.00 0.00 3.01
3874 3944 1.205417 CATGTCCAAGGTTGCCCATTC 59.795 52.381 0.00 0.00 0.00 2.67
3875 3945 1.269012 CATGTCCAAGGTTGCCCATT 58.731 50.000 0.00 0.00 0.00 3.16
3876 3946 0.615544 CCATGTCCAAGGTTGCCCAT 60.616 55.000 0.00 0.00 0.00 4.00
3877 3947 1.228831 CCATGTCCAAGGTTGCCCA 60.229 57.895 0.00 0.00 0.00 5.36
3878 3948 2.649129 GCCATGTCCAAGGTTGCCC 61.649 63.158 0.00 0.00 0.00 5.36
3879 3949 2.973082 GCCATGTCCAAGGTTGCC 59.027 61.111 0.00 0.00 0.00 4.52
3880 3950 2.268076 ACGCCATGTCCAAGGTTGC 61.268 57.895 0.00 0.00 0.00 4.17
3881 3951 0.888736 TCACGCCATGTCCAAGGTTG 60.889 55.000 0.00 0.00 0.00 3.77
3882 3952 0.179004 TTCACGCCATGTCCAAGGTT 60.179 50.000 0.00 0.00 0.00 3.50
3883 3953 0.606401 CTTCACGCCATGTCCAAGGT 60.606 55.000 0.00 0.00 0.00 3.50
3884 3954 0.606401 ACTTCACGCCATGTCCAAGG 60.606 55.000 0.00 0.00 0.00 3.61
3885 3955 2.093306 TACTTCACGCCATGTCCAAG 57.907 50.000 0.00 0.00 0.00 3.61
3886 3956 2.147958 GTTACTTCACGCCATGTCCAA 58.852 47.619 0.00 0.00 0.00 3.53
3887 3957 1.070914 TGTTACTTCACGCCATGTCCA 59.929 47.619 0.00 0.00 0.00 4.02
3888 3958 1.803334 TGTTACTTCACGCCATGTCC 58.197 50.000 0.00 0.00 0.00 4.02
3889 3959 4.034048 CCTATTGTTACTTCACGCCATGTC 59.966 45.833 0.00 0.00 0.00 3.06
3890 3960 3.938963 CCTATTGTTACTTCACGCCATGT 59.061 43.478 0.00 0.00 0.00 3.21
3891 3961 3.938963 ACCTATTGTTACTTCACGCCATG 59.061 43.478 0.00 0.00 0.00 3.66
3892 3962 4.216411 ACCTATTGTTACTTCACGCCAT 57.784 40.909 0.00 0.00 0.00 4.40
3893 3963 3.688694 ACCTATTGTTACTTCACGCCA 57.311 42.857 0.00 0.00 0.00 5.69
3894 3964 5.049267 TGAAAACCTATTGTTACTTCACGCC 60.049 40.000 0.00 0.00 35.67 5.68
3895 3965 5.992729 TGAAAACCTATTGTTACTTCACGC 58.007 37.500 0.00 0.00 35.67 5.34
3896 3966 7.416154 TCTGAAAACCTATTGTTACTTCACG 57.584 36.000 0.00 0.00 35.67 4.35
3901 3971 9.362151 TGGAAAATCTGAAAACCTATTGTTACT 57.638 29.630 0.00 0.00 35.67 2.24
3902 3972 9.974980 TTGGAAAATCTGAAAACCTATTGTTAC 57.025 29.630 0.00 0.00 35.67 2.50
3904 3974 9.325198 GTTTGGAAAATCTGAAAACCTATTGTT 57.675 29.630 0.00 0.00 39.43 2.83
3905 3975 7.931407 GGTTTGGAAAATCTGAAAACCTATTGT 59.069 33.333 10.65 0.00 44.10 2.71
3906 3976 7.116233 CGGTTTGGAAAATCTGAAAACCTATTG 59.884 37.037 14.22 0.33 44.89 1.90
3907 3977 7.151976 CGGTTTGGAAAATCTGAAAACCTATT 58.848 34.615 14.22 0.00 44.89 1.73
3908 3978 6.295067 CCGGTTTGGAAAATCTGAAAACCTAT 60.295 38.462 14.22 0.00 44.89 2.57
3909 3979 5.010213 CCGGTTTGGAAAATCTGAAAACCTA 59.990 40.000 14.22 0.00 44.89 3.08
3910 3980 4.202212 CCGGTTTGGAAAATCTGAAAACCT 60.202 41.667 14.22 0.00 44.89 3.50
3911 3981 4.055360 CCGGTTTGGAAAATCTGAAAACC 58.945 43.478 8.64 8.64 44.06 3.27
3912 3982 4.689071 ACCGGTTTGGAAAATCTGAAAAC 58.311 39.130 0.00 0.00 42.00 2.43
3913 3983 5.346181 AACCGGTTTGGAAAATCTGAAAA 57.654 34.783 15.86 0.00 42.00 2.29
3914 3984 6.274579 GTTAACCGGTTTGGAAAATCTGAAA 58.725 36.000 27.64 5.63 42.00 2.69
3915 3985 5.221283 GGTTAACCGGTTTGGAAAATCTGAA 60.221 40.000 27.64 5.86 42.00 3.02
3916 3986 4.278919 GGTTAACCGGTTTGGAAAATCTGA 59.721 41.667 27.64 0.00 42.00 3.27
3917 3987 4.279922 AGGTTAACCGGTTTGGAAAATCTG 59.720 41.667 27.64 0.00 42.00 2.90
3918 3988 4.476297 AGGTTAACCGGTTTGGAAAATCT 58.524 39.130 27.64 15.82 42.00 2.40
3919 3989 4.859304 AGGTTAACCGGTTTGGAAAATC 57.141 40.909 27.64 13.59 42.00 2.17
3920 3990 6.728089 TTAAGGTTAACCGGTTTGGAAAAT 57.272 33.333 27.64 8.88 42.00 1.82
3921 3991 6.535963 TTTAAGGTTAACCGGTTTGGAAAA 57.464 33.333 27.64 10.55 42.00 2.29
3922 3992 6.336566 GTTTTAAGGTTAACCGGTTTGGAAA 58.663 36.000 27.64 10.98 42.00 3.13
3923 3993 5.449725 CGTTTTAAGGTTAACCGGTTTGGAA 60.450 40.000 27.64 11.40 42.00 3.53
3924 3994 4.036144 CGTTTTAAGGTTAACCGGTTTGGA 59.964 41.667 27.64 9.45 42.00 3.53
3925 3995 4.202000 ACGTTTTAAGGTTAACCGGTTTGG 60.202 41.667 27.64 9.48 46.41 3.28
3926 3996 4.919206 ACGTTTTAAGGTTAACCGGTTTG 58.081 39.130 27.64 9.40 42.08 2.93
3927 3997 4.036262 GGACGTTTTAAGGTTAACCGGTTT 59.964 41.667 27.64 9.68 42.08 3.27
3928 3998 3.563808 GGACGTTTTAAGGTTAACCGGTT 59.436 43.478 25.64 25.64 42.08 4.44
3929 3999 3.138304 GGACGTTTTAAGGTTAACCGGT 58.862 45.455 18.91 13.31 42.08 5.28
3930 4000 2.157474 CGGACGTTTTAAGGTTAACCGG 59.843 50.000 18.91 0.00 42.08 5.28
3931 4001 2.411418 GCGGACGTTTTAAGGTTAACCG 60.411 50.000 18.91 7.72 42.08 4.44
3932 4002 2.095768 GGCGGACGTTTTAAGGTTAACC 60.096 50.000 17.41 17.41 0.00 2.85
3933 4003 2.095768 GGGCGGACGTTTTAAGGTTAAC 60.096 50.000 0.00 0.00 0.00 2.01
3934 4004 2.150390 GGGCGGACGTTTTAAGGTTAA 58.850 47.619 0.00 0.00 0.00 2.01
3935 4005 1.610363 GGGGCGGACGTTTTAAGGTTA 60.610 52.381 0.00 0.00 0.00 2.85
3936 4006 0.890542 GGGGCGGACGTTTTAAGGTT 60.891 55.000 0.00 0.00 0.00 3.50
3937 4007 1.302752 GGGGCGGACGTTTTAAGGT 60.303 57.895 0.00 0.00 0.00 3.50
3938 4008 1.002990 AGGGGCGGACGTTTTAAGG 60.003 57.895 0.00 0.00 0.00 2.69
3939 4009 1.022982 GGAGGGGCGGACGTTTTAAG 61.023 60.000 0.00 0.00 0.00 1.85
3940 4010 1.003476 GGAGGGGCGGACGTTTTAA 60.003 57.895 0.00 0.00 0.00 1.52
3941 4011 2.664398 GGAGGGGCGGACGTTTTA 59.336 61.111 0.00 0.00 0.00 1.52
3942 4012 4.340246 GGGAGGGGCGGACGTTTT 62.340 66.667 0.00 0.00 0.00 2.43
3947 4017 0.546988 ATATAAGGGGAGGGGCGGAC 60.547 60.000 0.00 0.00 0.00 4.79
3948 4018 0.252558 GATATAAGGGGAGGGGCGGA 60.253 60.000 0.00 0.00 0.00 5.54
3949 4019 1.614241 CGATATAAGGGGAGGGGCGG 61.614 65.000 0.00 0.00 0.00 6.13
3950 4020 0.613853 TCGATATAAGGGGAGGGGCG 60.614 60.000 0.00 0.00 0.00 6.13
3951 4021 0.903236 GTCGATATAAGGGGAGGGGC 59.097 60.000 0.00 0.00 0.00 5.80
3952 4022 2.320681 TGTCGATATAAGGGGAGGGG 57.679 55.000 0.00 0.00 0.00 4.79
3953 4023 2.766828 GGATGTCGATATAAGGGGAGGG 59.233 54.545 0.00 0.00 0.00 4.30
3954 4024 2.766828 GGGATGTCGATATAAGGGGAGG 59.233 54.545 0.00 0.00 0.00 4.30
3963 4033 3.118629 AGCGCATTATGGGATGTCGATAT 60.119 43.478 11.47 0.00 32.31 1.63
3964 4034 2.233676 AGCGCATTATGGGATGTCGATA 59.766 45.455 11.47 0.00 32.31 2.92
3965 4035 1.002430 AGCGCATTATGGGATGTCGAT 59.998 47.619 11.47 0.00 32.31 3.59
3966 4036 0.392706 AGCGCATTATGGGATGTCGA 59.607 50.000 11.47 0.00 32.31 4.20
3967 4037 1.229428 AAGCGCATTATGGGATGTCG 58.771 50.000 11.47 0.00 31.21 4.35
3968 4038 3.066621 TCAAAAGCGCATTATGGGATGTC 59.933 43.478 11.47 0.00 31.21 3.06
3969 4039 3.023119 TCAAAAGCGCATTATGGGATGT 58.977 40.909 11.47 0.00 31.21 3.06
3971 4041 4.942761 ATTCAAAAGCGCATTATGGGAT 57.057 36.364 11.47 3.52 31.21 3.85
3974 4044 6.634436 GTCTCTAATTCAAAAGCGCATTATGG 59.366 38.462 11.47 0.00 0.00 2.74
3975 4045 6.634436 GGTCTCTAATTCAAAAGCGCATTATG 59.366 38.462 11.47 5.71 0.00 1.90
3981 4051 2.747446 TGGGTCTCTAATTCAAAAGCGC 59.253 45.455 0.00 0.00 0.00 5.92
3984 4054 8.049721 AGTCCTAATGGGTCTCTAATTCAAAAG 58.950 37.037 0.00 0.00 36.25 2.27
3987 4057 7.510675 AAGTCCTAATGGGTCTCTAATTCAA 57.489 36.000 0.00 0.00 32.47 2.69
3990 4060 7.624077 ACACTAAGTCCTAATGGGTCTCTAATT 59.376 37.037 0.00 0.00 32.47 1.40
3994 4064 4.949121 ACACTAAGTCCTAATGGGTCTCT 58.051 43.478 0.00 0.00 32.47 3.10
3995 4065 5.265350 GACACTAAGTCCTAATGGGTCTC 57.735 47.826 0.00 0.00 41.56 3.36
4009 4079 3.002038 ACGGAGGGAGTAGACACTAAG 57.998 52.381 0.00 0.00 34.21 2.18
4010 4080 3.446442 AACGGAGGGAGTAGACACTAA 57.554 47.619 0.00 0.00 34.21 2.24
4011 4081 3.009916 AGAAACGGAGGGAGTAGACACTA 59.990 47.826 0.00 0.00 34.21 2.74
4012 4082 2.169330 GAAACGGAGGGAGTAGACACT 58.831 52.381 0.00 0.00 37.87 3.55
4013 4083 2.169330 AGAAACGGAGGGAGTAGACAC 58.831 52.381 0.00 0.00 0.00 3.67
4014 4084 2.599408 AGAAACGGAGGGAGTAGACA 57.401 50.000 0.00 0.00 0.00 3.41
4015 4085 5.595257 ATTTAGAAACGGAGGGAGTAGAC 57.405 43.478 0.00 0.00 0.00 2.59
4016 4086 7.909485 AATATTTAGAAACGGAGGGAGTAGA 57.091 36.000 0.00 0.00 0.00 2.59
4017 4087 7.985752 ACAAATATTTAGAAACGGAGGGAGTAG 59.014 37.037 0.00 0.00 0.00 2.57
4018 4088 7.854337 ACAAATATTTAGAAACGGAGGGAGTA 58.146 34.615 0.00 0.00 0.00 2.59
4019 4089 6.718294 ACAAATATTTAGAAACGGAGGGAGT 58.282 36.000 0.00 0.00 0.00 3.85
4020 4090 7.048512 AGACAAATATTTAGAAACGGAGGGAG 58.951 38.462 0.00 0.00 0.00 4.30
4021 4091 6.954232 AGACAAATATTTAGAAACGGAGGGA 58.046 36.000 0.00 0.00 0.00 4.20
4022 4092 7.625828 AAGACAAATATTTAGAAACGGAGGG 57.374 36.000 0.00 0.00 0.00 4.30
4023 4093 9.908152 AAAAAGACAAATATTTAGAAACGGAGG 57.092 29.630 0.00 0.00 0.00 4.30
4056 4126 9.219603 GCATCTGTATGTGATAGCCTATTTAAA 57.780 33.333 0.00 0.00 35.38 1.52
4057 4127 8.374743 TGCATCTGTATGTGATAGCCTATTTAA 58.625 33.333 0.00 0.00 35.38 1.52
4058 4128 7.906327 TGCATCTGTATGTGATAGCCTATTTA 58.094 34.615 0.00 0.00 35.38 1.40
4059 4129 6.772605 TGCATCTGTATGTGATAGCCTATTT 58.227 36.000 0.00 0.00 35.38 1.40
4060 4130 6.364568 TGCATCTGTATGTGATAGCCTATT 57.635 37.500 0.00 0.00 35.38 1.73
4061 4131 6.556974 ATGCATCTGTATGTGATAGCCTAT 57.443 37.500 0.00 0.00 35.38 2.57
4062 4132 7.666063 ATATGCATCTGTATGTGATAGCCTA 57.334 36.000 0.19 0.00 35.38 3.93
4063 4133 4.904895 ATGCATCTGTATGTGATAGCCT 57.095 40.909 0.00 0.00 35.38 4.58
4064 4134 7.651304 GTCTATATGCATCTGTATGTGATAGCC 59.349 40.741 0.19 0.00 35.38 3.93
4065 4135 8.193438 TGTCTATATGCATCTGTATGTGATAGC 58.807 37.037 0.19 0.00 35.38 2.97
4101 4171 6.017933 CGAAGCAAAATGAGTGAATCTACAC 58.982 40.000 0.00 0.00 40.60 2.90
4102 4172 5.700832 ACGAAGCAAAATGAGTGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
4103 4173 6.170675 ACGAAGCAAAATGAGTGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
4104 4174 7.549134 ACATACGAAGCAAAATGAGTGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
4105 4175 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
4106 4176 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
4107 4177 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
4108 4178 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
4109 4179 5.238432 ACAACATACGAAGCAAAATGAGTGA 59.762 36.000 0.00 0.00 0.00 3.41
4110 4180 5.451908 ACAACATACGAAGCAAAATGAGTG 58.548 37.500 0.00 0.00 0.00 3.51
4111 4181 5.238432 TGACAACATACGAAGCAAAATGAGT 59.762 36.000 0.00 0.00 0.00 3.41
4112 4182 5.565259 GTGACAACATACGAAGCAAAATGAG 59.435 40.000 0.00 0.00 0.00 2.90
4113 4183 5.238432 AGTGACAACATACGAAGCAAAATGA 59.762 36.000 0.00 0.00 0.00 2.57
4114 4184 5.451908 AGTGACAACATACGAAGCAAAATG 58.548 37.500 0.00 0.00 0.00 2.32
4115 4185 5.689383 AGTGACAACATACGAAGCAAAAT 57.311 34.783 0.00 0.00 0.00 1.82
4116 4186 5.163703 ACAAGTGACAACATACGAAGCAAAA 60.164 36.000 0.00 0.00 0.00 2.44
4117 4187 4.334203 ACAAGTGACAACATACGAAGCAAA 59.666 37.500 0.00 0.00 0.00 3.68
4118 4188 3.874543 ACAAGTGACAACATACGAAGCAA 59.125 39.130 0.00 0.00 0.00 3.91
4119 4189 3.462982 ACAAGTGACAACATACGAAGCA 58.537 40.909 0.00 0.00 0.00 3.91
4120 4190 4.025229 TCAACAAGTGACAACATACGAAGC 60.025 41.667 0.00 0.00 0.00 3.86
4121 4191 5.651172 TCAACAAGTGACAACATACGAAG 57.349 39.130 0.00 0.00 0.00 3.79
4122 4192 6.424176 TTTCAACAAGTGACAACATACGAA 57.576 33.333 0.00 0.00 35.39 3.85
4123 4193 6.481976 AGATTTCAACAAGTGACAACATACGA 59.518 34.615 0.00 0.00 35.39 3.43
4124 4194 6.658831 AGATTTCAACAAGTGACAACATACG 58.341 36.000 0.00 0.00 35.39 3.06
4125 4195 7.865707 AGAGATTTCAACAAGTGACAACATAC 58.134 34.615 0.00 0.00 35.39 2.39
4126 4196 9.208022 CTAGAGATTTCAACAAGTGACAACATA 57.792 33.333 0.00 0.00 35.39 2.29
4127 4197 6.949352 AGAGATTTCAACAAGTGACAACAT 57.051 33.333 0.00 0.00 35.39 2.71
4128 4198 7.272244 TCTAGAGATTTCAACAAGTGACAACA 58.728 34.615 0.00 0.00 35.39 3.33
4129 4199 7.715265 TCTAGAGATTTCAACAAGTGACAAC 57.285 36.000 0.00 0.00 35.39 3.32
4130 4200 8.731275 TTTCTAGAGATTTCAACAAGTGACAA 57.269 30.769 0.00 0.00 35.39 3.18
4131 4201 8.204160 TCTTTCTAGAGATTTCAACAAGTGACA 58.796 33.333 0.00 0.00 35.39 3.58
4132 4202 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
4133 4203 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
4134 4204 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
4135 4205 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
4148 4218 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
4149 4219 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
4150 4220 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
4151 4221 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
4152 4222 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
4153 4223 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
4154 4224 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
4155 4225 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
4156 4226 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
4157 4227 5.681639 CTCCCTCCGTTCCTAAATATTTGT 58.318 41.667 11.05 0.00 0.00 2.83
4158 4228 4.515567 GCTCCCTCCGTTCCTAAATATTTG 59.484 45.833 11.05 1.40 0.00 2.32
4159 4229 4.165372 TGCTCCCTCCGTTCCTAAATATTT 59.835 41.667 5.89 5.89 0.00 1.40
4160 4230 3.714798 TGCTCCCTCCGTTCCTAAATATT 59.285 43.478 0.00 0.00 0.00 1.28
4161 4231 3.314693 TGCTCCCTCCGTTCCTAAATAT 58.685 45.455 0.00 0.00 0.00 1.28
4162 4232 2.698797 CTGCTCCCTCCGTTCCTAAATA 59.301 50.000 0.00 0.00 0.00 1.40
4163 4233 1.486726 CTGCTCCCTCCGTTCCTAAAT 59.513 52.381 0.00 0.00 0.00 1.40
4164 4234 0.902531 CTGCTCCCTCCGTTCCTAAA 59.097 55.000 0.00 0.00 0.00 1.85
4165 4235 0.252103 ACTGCTCCCTCCGTTCCTAA 60.252 55.000 0.00 0.00 0.00 2.69
4166 4236 0.252103 AACTGCTCCCTCCGTTCCTA 60.252 55.000 0.00 0.00 0.00 2.94
4167 4237 1.536662 AACTGCTCCCTCCGTTCCT 60.537 57.895 0.00 0.00 0.00 3.36
4168 4238 1.079057 GAACTGCTCCCTCCGTTCC 60.079 63.158 0.00 0.00 31.89 3.62
4169 4239 0.670854 GTGAACTGCTCCCTCCGTTC 60.671 60.000 0.00 0.00 37.02 3.95
4170 4240 1.371558 GTGAACTGCTCCCTCCGTT 59.628 57.895 0.00 0.00 0.00 4.44
4171 4241 1.407656 TTGTGAACTGCTCCCTCCGT 61.408 55.000 0.00 0.00 0.00 4.69
4172 4242 0.036010 ATTGTGAACTGCTCCCTCCG 60.036 55.000 0.00 0.00 0.00 4.63
4173 4243 2.206576 AATTGTGAACTGCTCCCTCC 57.793 50.000 0.00 0.00 0.00 4.30
4174 4244 3.057946 GTGAAATTGTGAACTGCTCCCTC 60.058 47.826 0.00 0.00 0.00 4.30
4175 4245 2.887152 GTGAAATTGTGAACTGCTCCCT 59.113 45.455 0.00 0.00 0.00 4.20
4176 4246 2.622942 TGTGAAATTGTGAACTGCTCCC 59.377 45.455 0.00 0.00 0.00 4.30
4177 4247 3.988379 TGTGAAATTGTGAACTGCTCC 57.012 42.857 0.00 0.00 0.00 4.70
4178 4248 7.377928 GCATATATGTGAAATTGTGAACTGCTC 59.622 37.037 14.14 0.00 0.00 4.26
4179 4249 7.148035 TGCATATATGTGAAATTGTGAACTGCT 60.148 33.333 14.14 0.00 0.00 4.24
4180 4250 6.974048 TGCATATATGTGAAATTGTGAACTGC 59.026 34.615 14.14 0.00 0.00 4.40
4181 4251 8.800972 GTTGCATATATGTGAAATTGTGAACTG 58.199 33.333 14.14 0.00 0.00 3.16
4182 4252 8.742777 AGTTGCATATATGTGAAATTGTGAACT 58.257 29.630 14.14 4.94 0.00 3.01
4183 4253 8.915871 AGTTGCATATATGTGAAATTGTGAAC 57.084 30.769 14.14 3.16 0.00 3.18
4184 4254 8.738106 TGAGTTGCATATATGTGAAATTGTGAA 58.262 29.630 14.14 0.00 0.00 3.18
4185 4255 8.278729 TGAGTTGCATATATGTGAAATTGTGA 57.721 30.769 14.14 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.