>input_sequence_36120
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--------------------------------------------------------------------ATGCTCGACGAC
GATCAGTCCTTCACCGTGAGTAAATCTCCTGACCATGATATAATCTA-CGCTCGGTTCTCGGAAATCGCTTGCTTTTTTA
CTGCATGTTTTGATGATGATCCGCCTCCTTTTGCCATCTTGCCCATGCATGCTGTTGATGAGGATTCCGTTCAAATGGCC
ATTGGCGAATGATCTTTGCTAGACAAACAGTTATGTGGACGGTGCAATAATTGTTTAGGTGTCTATCTATCACACCAAAG
CCAAAAGCAGGCACGGGATCCAGAAGAGGAGGAAATCTTTCGGCTTTTGGACCCCGGCCCCGTTGCAGTACAGAGGGAAT
CGATGCCTCGACTTGATAGTTTTTGCTTCGTGATCTCGTTAACCTTTACGTCCGCATTGCGTGCGCCGCGGAGAATTCTG
ATCAGGACCGCCTCTGCTTGGCCTGGCTTAAATTCCCTCATCCTTAACAGT-AACATTCCCCGGCATACGGCATACGGAC
CTATCCTTCCACTGTTCTATCCGTTCCAATTCCGTCCTCATGGATGCAGAATTGAGCTGTGCAAATGCAGATACAACAGT
ACGGCATTTGATTCCCTCGCCCAAAACAGATTATATAAGGATCGTAGACGAAATGTGCTTGATCATGTAGATTGTAGGAT
GTATTTTGTCTTTCTTTCTGAATCAAGAATCATGGTGGCTAACAGTAGCATTTGCATTCTACAGGCGTGTACATGCGTAC
CTGGTCTCTCCTGTTGATCGGAGTTGAGGCATGAAACAGGGGGCG-CTGACGAATTTGTTGGTTTCTTGCAGGAGGGCAT
CTCGAGCCCCATAGCCGCGCACATCCTCGACTTCTGCGACGATGGCAGCGGCGGCGGCGATCTCTTCGGTGCGGTGAACG
CGGCGTCCGACGTGTTCGCTGCCTCATCGGAGGACGCCTCGTCGTCGTCCACCACCACGCCTCCTCTCTGCAGCCATGGC
GACAACATGTCGTCGGGCGCGGCCGCGGCCACGACCACGGCCACCTTCTCCCCCTTGCCGTCCCTCGACTCCACACTCTC
GGCACTCCTCGAGGAAGACCAGCCGCCTGGCCCCGACGCCGAGCTCCTCCTCCCAATAGACTACGCGTTTGCGGCGGCGG
CGGCGGGCACGGACGAGACCCAGACGGAGCAGCAACAGTTTGGCCAGATGGTGCTCCCGGTGGTGACCGCGGCAGAGCAC
CACCCGGCGCTGCAGACGCAAATGAGCAGCACGGCGTCCGACCTCATGCAGCTCACCTCGGGATACACCGACGAGTGCTT
CGCGGCGGCGCTGGCCGGAGGGTTCATGGGGCTGGAGGAGACCCTGTGCCAGCAGCAGCCTGGCGCGATGCTCCCCGGCG
CCGCCGACGCGGCGACGCA------------------GGGGTGTTACGCGACCCAGGGAGGTTTCTTCGGCGGCGGCGGC
GGTTGCACGGGCACCGTGATGTCGATGATGCTGGGGATGGAGGAGATGGGCGAGTACCAGAGGATGATGGAGGGCGGCGC
GCTGGTGGACGCCGACTCCGCGGGGCAGATGGCGTTCCCTACCGCCGCAGAGATGCAGGTAGAAACCCCGAACGAATTCG
CCAAGAATCTCAATCCGTA---GTAGGACAGAGCATGACCGATCGTTTCGCGGTGGTATAGATGGGAGGCAGCGGGAGCC
CCGGGCGGCTGCCGGCGGCGGGAGAGACCTCGAGCCTGGAGGACACGAGCTTCAAGGCCGCCCGCCTCTCCGTGGAGGAG
AGGAAGGAGAAGATCCACCGGTACATCAAGAAGAGGAACGAGCGGAACTTCAGCAAGAAGATCAAGGTGACCCACCAAAC
CAGAATCAATCACCTTTAAACGATCCATGCATGGTCCTCGACGCCGCTGACATATCCGATCGGAAAACTGCAGTACGCGT
GCAGGAAAACCTTGGCGGACAGCAGGCCGCGCGTCCGCGGGAGGTTCGCCAAGAACGACGAGTACTGCGAAGCGTCCACG
GCGATGGGATCACAGAACCACGAGGAGTACGAGCAGATGGTAAGTCTGGATAA---TTCATCAATCGCCAGCTCCGGCTC
TGATCCGACGAGCATGTC---GTCGCTAACGAGTTTTTTCCATTTCAGCCGGGCGTGAAGGCGGAGGACATGCTCGACCC
CGACGCGCTGGCGCACATCAGCGGGATGAGCTCCTACATGTACAACCACACGGTGGAGTCGTGGATATAA----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------
>chr1A_1_TraesCS1A01G148300
AGAAGACATCCGAGGGGCATCTTAGATCTGATAAATACCATGGAAAAATAATCAGTGCGGTGAAAAAACAACTAGACGCA
AAACGAGTAGTAAAAAATAACATTAATTCTTACTGCACCGGATCGATTGCATGCCCTAAAAGCCTTCACGAGCCAA-GAT
CGCCAAAATTGTTGCCAAATACTCCCTCCGTTTCTAAATATTTGTCTTTTTGGACATTTTAAATGACTACTACATACGAA
TGTATGTAGACATATTTTAGAGTATAGATTCACTCATTTTGCTCCGTATGTAGTCCCTTGTTGAAATGTCTAGAAAGACA
AGTATTTAGGAACGGAGGGAGTACATATGGATCGCTAGCTAGCATGCAC---------------GATGCGAGTCATGGCG
GTACATACATCTTAATCAAGAATTCTCTCTCTCTC----------TCTCAAGAAAAGATCGGGCCTATGCATGAGTGCGT
TGGAATCAAGATAGAATCTCCCGTTTTCCTCGCATCATTTTGTGTAGGCATCGTTTCTCGGTCAAAACCGAGCTAGGAGT
CAGGAGAAAAAACTAATCTTGGATAGACAAGGCGGTTCGTTTAGCGCCAAAATACAGCTCATAACCTGCACAAAAATAGC
AGCTATCTTGGACATTCCTTCCCCAAGGCTTGCCCGTTTCAGTTTTAACTGAGGGCATGTTGGTCTTTGACCGCGGTACA
TGTGCGCGCTCCTTGTCCTAATTAAGTAACCGGGGCCGCCTAATTGTCCTAATCTCCTGTTGAAAATCCACATCTTGTTA
CAAAAAGTGCCCGTATCTCATGGCCTATAATTAGCCCAGACTCCTAGTTCCTGATCTTCCTGTTCCTGGCCTTATAAATA
GAAGCCGTTGCCATTTGCATGGTCTACAAGCTTCTCATCTCTTCCTCTTCCTCTTCCACC--CCCTCTGCGGTTTCATCC
AGAAAAGATCGAAGCAAAACATTGGAGTGCTCGCCGCCGGCCGGGGTTTCCAATCGACGGTGCACGCCATGCTCGACGAC
GATCAGTCCTTCACCGTGAGTAAATCTCCTGACCATGATATAATCTA-CGCTCGGTTCTCGGAAATCGCTTGCTTTTTTA
CTGCATGTTTTGATGATGATCCGCCTCCTTTTGCCATCTTGCCCATGCATGCTGTTGATGAGGATTCCGTTCAAATGGCC
ATTGGCGAATGATCTTTGCTAGACAAACAGTTATGTGGACGGTGCAATAATTGTTTAGGTGTCTATCTATCACACCAAAG
CCAAAAGCAGGCACGGGATCCAGAAGAGGAGGAAATCTTTCGGCTTTTGGACCCCGGCCCCGTTGCAGTACAGAGGGAAT
CGATGCCTCGACTTGATAGTTTTTGCTTCGTGATCTCGTTAACCTTTACGTCCGCATTGCGTGCGCCGCGGAGAATTCTG
ATCAGGACCGCCTCTGCTTGGCCTGGCTTAAATTCCCTCATCCTTAACAGT-AACATTCCCCGGCATACGGCATACGGAC
CTATCCTTCCACTGTTCTATCCGTTCCAATTCCGTCCTCATGGATGCAGAATTGAGCTGTGCAAATGCAGATACAACAGT
ACGGCATTTGATTCCCTCGCCCAAAACAGATTATATAAGGATCGTAGACGAAATGTGCTTGATCATGTAGATTGTAGGAT
GTATTTTGTCTTTCTTTCTGAATCAAGAATCATGGTGGCTAACAGTAGCATTTGCATTCTACAGGCGTGTACATGCGTAC
CTGGTCTCTCCTGTTGATCGGAGTTGAGGCATGAAACAGGGGGCG-CTGACGAATTTGTTGGTTTCTTGCAGGAGGGCAT
CTCGAGCCCCATAGCCGCGCACATCCTCGACTTCTGCGACGATGGCAGCGGCGGCGGCGATCTCTTCGGTGCGGTGAACG
CGGCGTCCGACGTGTTCGCTGCCTCATCGGAGGACGCCTCGTCGTCGTCCACCACCACGCCTCCTCTCTGCAGCCATGGC
GACAACATGTCGTCGGGCGCGGCCGCGGCCACGACCACGGCCACCTTCTCCCCCTTGCCGTCCCTCGACTCCACACTCTC
GGCACTCCTCGAGGAAGACCAGCCGCCTGGCCCCGACGCCGAGCTCCTCCTCCCAATAGACTACGCGTTTGCGGCGGCGG
CGGCGGGCACGGACGAGACCCAGACGGAGCAGCAACAGTTTGGCCAGATGGTGCTCCCGGTGGTGACCGCGGCAGAGCAC
CACCCGGCGCTGCAGACGCAAATGAGCAGCACGGCGTCCGACCTCATGCAGCTCACCTCGGGATACACCGACGAGTGCTT
CGCGGCGGCGCTGGCCGGAGGGTTCATGGGGCTGGAGGAGACCCTGTGCCAGCAGCAGCCTGGCGCGATGCTCCCCGGCG
CCGCCGACGCGGCGACGCA------------------GGGGTGTTACGCGACCCAGGGAGGTTTCTTCGGCGGCGGCGGC
GGTTGCACGGGCACCGTGATGTCGATGATGCTGGGGATGGAGGAGATGGGCGAGTACCAGAGGATGATGGAGGGCGGCGC
GCTGGTGGACGCCGACTCCGCGGGGCAGATGGCGTTCCCTACCGCCGCAGAGATGCAGGTAGAAACCCCGAACGAATTCG
CCAAGAATCTCAATCCGTA---GTAGGACAGAGCATGACCGATCGTTTCGCGGTGGTATAGATGGGAGGCAGCGGGAGCC
CCGGGCGGCTGCCGGCGGCGGGAGAGACCTCGAGCCTGGAGGACACGAGCTTCAAGGCCGCCCGCCTCTCCGTGGAGGAG
AGGAAGGAGAAGATCCACCGGTACATCAAGAAGAGGAACGAGCGGAACTTCAGCAAGAAGATCAAGGTGACCCACCAAAC
CAGAATCAATCACCTTTAAACGATCCATGCATGGTCCTCGACGCCGCTGACATATCCGATCGGAAAACTGCAGTACGCGT
GCAGGAAAACCTTGGCGGACAGCAGGCCGCGCGTCCGCGGGAGGTTCGCCAAGAACGACGAGTACTGCGAAGCGTCCACG
GCGATGGGATCACAGAACCACGAGGAGTACGAGCAGATGGTAAGTCTGGATAA---TTCATCAATCGCCAGCTCCGGCTC
TGATCCGACGAGCATGTC---GTCGCTAACGAGTTTTTTCCATTTCAGCCGGGCGTGAAGGCGGAGGACATGCTCGACCC
CGACGCGCTGGCGCACATCAGCGGGATGAGCTCCTACATGTACAACCACACGGTGGAGTCGTGGATATAATCTAACTCAC
GACGAACACGAGCCCCCGCTAATTCCATTTTTCCC-CAACCTATTTTACACGTGCAGATTTTTAACAGCCTGTTTAACTT
GATTTTGGTCCCGTGGAATAATTTTGTAGCTCCTGAAGCGGCGAGTTGAATTTACTTACCATGTAGGGTCGGCCGGTCTG
TTGTGTCAGTCGAAATCTGCTTTTCGCTTGTTGCAGCTAATTCTTGCAGGTGAATGTGAGGTTTTAGAGTTTGCGGAGGA
GTTGTGTACTTGTTTTTTTTTTAATAGAAAACACAGCTTCAGGGATCATGTATCATTGTATCTGGTCTTGCTCTTTTCCA
ATTCAACTGAACTCTGAGAATTGTAGGGATACAGGTAGACTATACCGGCGCAAATTTATTTTTTTT--TACGAAATAATG
AATTGTTGCTACAATACATTATA---AGATTTACCACTAAAAT-----GACAATTGCAGAAGCAGAATCGGTGTAGTGTG
TCGGTGCAACTGTAGTCATACTACTTTCTCCCCTTGCGGACCCCTCGAATAATTCGTTTATGCGTTGCAGCTGCAGCCGC
AGCTCATCGAGTGTGTCCACAATTCAAAGAGGGGTGATTTTTTTGTCTCCCGAGGCTCAAGGTCTCTCCCATCGCCGACA
CGACCCATCAGATCACTAGATTGGAATGGGCAACCTTGGACATGGCGTGAAGTAACAATAGGTTTTCAGATTTTCCAAAC
CGGTTAACCTTAAAACGTCCGCCCCTCCCCTTATATCGACATCCCATAATGCGCTTTTGAATTAGAGACCCATTAGGACT
TAGTGTCTACTCCCTCCGTTTCTAAATATTTGTCTTTTTAGAGATTTTAAATAGGCTATCACATACAGATGCATATAGAC
ATATTTTAGAGTGTAGATTCACTCATTTTGCTTCGTATGTTGTCACTTGTTGAAATCTCTAGAAAGACAAATATTTAGGA
ACGGAGGGAGCAGTTCACAATTTCACATATATGCAACTCAT
>chr1B_1
AGAAGACATCCAAGGGGCATCTTAGATATGATAAATATCATGAAAAAATAATCAGTATGGTGAAAAGACAACTAGACGCA
GAACAAGTAGTACAAAATAACATTAATTCTTACTGCACCGGATGGATTGCATGCCCTAAAAGCCTTCACGAGCCAAAGAT
CGCCAAAATTGTTGTCA---------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AATACATATGGATCGCTAGCTAGCATGCAC---------------G---------------
GTACATACATCGCTTAATCATGAAG--TCTCTCTCTCTCTCTCTGTCTCAAGAAAAGATCGGGCATATGCATGAGTGCGT
TGGAATCAAGATAGAATCTCCCGTTTTCCTCGCATCATTTTGTGTATGTATTGTTTCCCGGTCAAAACCGAGCTAAGAGT
CAGGAGAAAAAACTAATCTTGGATAGACAAGGCGGTTCGTTTAGCGCCAAAATACAGCTCATAACCTGCACAAAAATAGC
AGCTATATTGGACATTCCTTCCCCAAGGCTTGCCCGTTTCAGTTTTAACTGAGGGCATGTTGGTCTTTGACCGCGGTACA
TGTGTGCCCTCCTTGTCCTAATTAAGTAACCAGGGCCGCCTAATTGTCCTAATCTCCTGTTGAAAATCCACATCTTGTTA
CAAAAAGTGCCCGTATCTCATGGCCTATAATTAGCCCAGACTCCTAGTTCCTGATCTTCCTGTTCCTGGCCTTATAAATA
GAAGCCGTTGCCATTTGCATGGTCTACGAGCTTCTCATCTCTTCCTCTTCCTCTTCCTATCTCCCTCTGCGGTTTCCCCC
AGAAAAGATCGAAGCAAAACATTGGA--------CGCCGGCCGGGGTTTCCAATCGACGGTGCACGCCATGCTCGACGAC
GATCAGTCCTTCACCGTATGTAAATCTTCTGACCATGATATAATTTACCGCTCGGTTCTCGGAAATCGTTTGCTTTTTT-
CTGCATGTTTTGATGATGATCCGCCTCCTTTTGCCATCTTGCCCATGCATGCTGTTGATGAGGATTCCGTTCAAATGGCC
ATTGGCAAATGATCTTTGCTAGACAAGCAGTTATGTGCACGGTGCAATAATTGTTTAGGTGTCTATCTATCACACCAAAG
CCAAAAGCAGGGACGGGATCCAGAAGAGGAGGAAATCTTTCGGCTTTTGGACCCCGGCCCCGTTGCAGTACAGAGAGAAT
CGATGCCTCGACTTGATAGTTTTTGCTTCGTGATCTCGTTAACCTTTATGTCCGCATTGCGTGCGCCGCAGAGAATTCTG
ATCAGGACCGCCTCTGCTTGGCTTGGCTTAAATTCTCTCATCCTTAACAGTAAACATTCCCCGGCATACGGCATACGGAC
CTATACTTCCACTGTTCTATCCGTCCCAATTCCATCCTCATGGATGCAAAATTGAGCTGTGCAAATGCAGATACAACAGT
ACGGCATTTGATTCCCTCGCCCAAAACAGATTATATAAGGATCGTAGACGAAATGTGCTTGATCATGTAGATTGTAGGAT
GCATTTTGTCTTTCTTTCTGAATCAAGAATCATGGTGGCTAACAGTAGCATTTGCATTCTACAGGCGTGTACATGCGTAC
CTGGTCTCTCCTGTTGATCGGAGTTGAGGCATGAAACAAGGGGCG-CTGACGAGTTTGTTGGTTTCTTGCAGGAGGGCAT
CTCGAGCCCCATAGCCGCGCACATCCTCGACTTCTGCGACGATGGCAGCGGCGGCGGCGACCTCTTCGGGGCGGTGAATG
CTGCATCCGACGTGTTCGCTGCCTCGTCGGAGGACGCCTCCTCGTCGTCCACCGCCACGCCTCCCCTCTGCAGCCATGGC
GACAACATGTCGTCGGGCGCGGCCGCGGCCACGACCACGGCCACCTTCTCCCCCTTGCCGTCCCTTGACTCCACACTCTC
GGCGCTCCTCGAGGAAGACCAGCCGCCTGGCCCCGACGCCGAGCTCCTCCTCCCCATAGACTACGCATTCGCGGCGGCGG
CGGCGGGCACGGACGAGGCCCAGACGGAGCAGCAACAGTTTGGCCAGATGGTGCTCCCGGTGGTGACCGCGGCAGAGCAC
CACCCGGCGCTGCAGACGCAAATGAGCAGCACGGCGTCCGAGCTCATGCAGCTCACCTCGGGATACACCGACGAGTGCTT
CGCAGCGGCGCTGGCCGGAGGGTTCATGGGGCTGGAGGAGACCCTGTGCCAGCAGCAGCCTGGAGCGATGCTCCCCGGCG
CCGCCGACGCGGCGACGCA------------------GGGAGGT---------------------TTCTTCGGCGGCGGC
GGTTGCACGGGCACCGTGATGTCGATGATGCTGGGGATGGAGGAGATGGGCGAGTACCAGAGGATGATGGAGGGCGGCGC
GCTGGTGGACGCCGACTCCGCGGGGCAGATGGCGTTCCCTACCGCCGCAGAGATGCAGGTAGAAACCCCGAACGAATTCG
CCAAGAATCGCAATCGAAATCGGTAGGACAGAGCATGACCGATCGTTTCGCGGTGGTATAGATGGGAGGCAGCGGGAGCC
CCGGGCGGCTGCCGGCGGCGGGAGAGACCTCGAGCCTGGAGGACACGAGCCTCAAGGCCGCCCGCCTCTCCGTGGAGGAG
AGGAAGGAGAAGATCCACCGGTACATCAAGAAGAGGAACGAGCGGAACTTCAGCAAGAAGATCAAGGTGGCCCACCAAAC
CAAAATCAATCACCTTGGAACGATCCATGCATGGTCCTCAACGCCGCTGACATATCCGATCGAAAATCTGCAGTACGCGT
GCAGGAAAACCTTGGCGGACAGCAGGCCGCGCGTCCGCGGGAGGTTCGCCAAGAACGACGAGTACTGCGAAGCATCCACG
GAGATCGGATCACAGAACCACGAGGAGTACGAGCAGATGGTAAGTCTGGATCAAATTTCATCGATCGCCAGCTCCGGCTC
TGATCCGACGAGCATGTC---GTCGCTAACGAG-TTTTTCCATTTCAGCCGGGCGTGAAGGCGGAGGACATGCTCGACCC
CGACGCGCTGGCGCACATCAGCGGGATGAGCTCCTACATGTACAACCACACGGTGGAGTCGTGGATATAATCTGACTCAC
GACGAACACGAGCCC--GCTAATTCCATTTTTCCCTCAACCTATTTTACACGTGCAGATTTTTAACAGCCTGTTTAACTT
GATTTTGGTCCCGTGGAATAATTTTGTAGCTCCTGAAGCGGCGAGTTGAATTTACTTACCATGTAGGGTCGGCCCGTCTG
TTGTGTCAGTCGAAATCTGCTTTTCGCTTGTTGCAGCTAATTCTTGCAGGTGAATGTGAGGTTTTAGAGTTTGCAGAGGA
GTTGTGTACTTGGC-TTTTTTTAATAGAAAACACAGCTTCAGGGATCATGTATC--------TGGTCTTGCTCTTTTCCA
ATTCAACTCAACTCTGAGAATTGCAGGGATACAGGTAGACTATACCGGCGCATTTTTTTTTTGTAAAATACGTAATCGGG
AATTGTTGCTGCAATACATTATA---AGATTTACCACTGAAATGTACAGACAATTGTAAAAGTAGAGTCAATATAGCGTG
TCGGTGCAACTGTAGTCATACTACTTTCTCCCCTTGTGGACCCCCCG---AATTCGTTTATGTGTTGCAGTTGCAGCCGC
AGCTCATCGAGTGTGACCAGAATTCAAAGAGGGATGGCGTCTTTATGTTATCATACGCAGTTGCAGTCGATGCAGTTGTA
GTCATACTACTTT-------------------------------------------------------------------
------------------------CTCCCCTTGCGGACCCCTCGAATAATTCGTTTATGCATTGCATCTACAGCAGCA--
--------------------------------------------------------------------------------
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-----------------------------------------
>chr1D_3
--AAGACATCCAAGGGGCATCTTAGATCTGATAAATATCATGGAAAAATAATCAGTGCGGTGAAAAGACAACT-GACGCA
GAACGAGTAGTAAAAAATAACATTAATTCTTACTGCACCGGATCGATTGCATGCCCTAAAAGCCTTCACGAGCCAAAGAT
CGCCAAAATTGTTGTGA---------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AGTACATATGGATCGCTAGCTAGCATGAACGGTGCGAGTCATGGTG---------------
GTACATACATCGCTTAATCAGGAAG--TCTCTCTT----------TCTCAAGAAAAGATCGGGCACAAGCATGAGCGCGT
TGGAATCAAGGTAGAATCTCCCGTTTTCCTCGCATCATTTTGTGTATGTATTGTTTCCCGGTCAAAACCGAGCTAAGAGT
CAGGAGAAAAAACTAATCTTGGATAGACAAGGCGGTTTGTTTAGCGCCAAAATACAGCTCATAACCTGCACAAAAATA--
-GCTATCTTGGACATTCCTTCCCCAAGGCTTGCCCGTTTCAGTTTTAACTGAGGGCATGTTGGTCTTTGACCGCGGTACA
TGTGTGCCCTCCTTGTCCTAATTAAGTAACCAGGGCCGCCTAATTGTCCTAATCTCCTGTTGAAAATCCACATCTTGTTA
CAAAAAGTGCCCGTATCTCATGGCCTATAATTAGCCCGGACTCCTAGTTCCTGATCTTCCTGTTCCTGGCCTTATAAATA
GAAGCCGTTGCCATTTGCATGGTCTACGAGCTTCTCATCTCTTCCTCTTCCTCTTCCACCC-CCCTCTGCGGTTTCATCC
AGAAAAGATCGAAGCAAAACATTGGAGTGCTCGCCGCCGGCCGGGGTTTCCAATCGACGGTGCACGCCATGCTTGACGAC
GATCAGTCCTTCACCGTAAGTAAATCTCCTGACCATGATATAATCTA-CGCTCGGTTCTCGGAAATCGTTTGCTTTTTTT
CTGCATGTTTTGATGATGATCCGCCTCCTTTTGCCATCTTGCCCATGCATGCTGTTGATGAGGATTCCGTTCAAATGGCC
ATTGGC-AATGATCTTTGCTAGACAAACAGTTATGTGCACGGTGCAATAATTGTTTAGGTGTCTATCTATCACACCAAAG
CCAAAAGCAGGGACGGGATCCAGAAGAGGAGGAAATCTTTCGGCTTTTGGACCCCGGCCCCGTTGCAGTACAGAGAGAAT
CGATGCCTCGACTTGATAGTTTTTGCTTCGTGATCTCGTTAACCTTTATGTCCGCATTGCGTGCGCCGCGGAGAATTCTG
ATCAGGACCGCCTCTGCTTGGCCTGGCTTAAATTCTCTCATCCTTAACAGT-AACATTCCCCGGCATACGGCATACGGAC
CTATACTTCCACTGTTCTATCCGTTCCAATTCCGTCCTCATGGATGCAGAATTGAGCTGTGCAAATGCAGATACAACAGT
ACGGCATTTGATTCCCTCGCCCAAAACAGATTATATAAGGATCGTAGATGAAATGTGCTTGATCATGTAGATTGTAGGAT
GCCTTTTGTCTTTCTTTCTGAATCAAGAATCATGGTGGCTAACAGTAGCATTTGCATTCTACAGGCGTGTGCATGCGTAC
CTGGTCTCTCCTGTTGATCGGAGTTGAGGCATGATACAGGGGGGCACTGACGAATTTGTTGGTTTCTTGCAGGAGGGCAT
CTCGAGCCCCATAGCCGCGCACATCCTCGACTTCTGCGACGATGGCGGCGGCGGCGGCGACCTCTTCGGGGCGGTGAACG
CTGCGTCCGACGTGTTCGCTGCCTCGTCGGAGGACGCCTCGTCGTCGTTCACCGCCACGCCTCCTCTCTGCAGCCATGGC
GATAACATGTCGTCGGGTGCGGCCGCGGCCACGACCACGGCCAGCTTCTCCCCCTTGCCGTCCCTTGACTCCACACTCTC
GGCGCTCCTCGAGGAAGACCAGCCGCCTGGCCCAGACGCCGAGCTCCTCCTCCCCATAGATTACGCGTTCGCGGCGGCGG
CGGCAGGCACGGACGAGACCCAGACGGAGCAGCAACAGTATGGCCAGATGGTGCTCCCGGTGGTGACCGCGGCAGAGCAC
CACCCGGCGCTGCAGACGCAAATGAGCAGCACGGCGTCCGACCTCATGCAGCTCACCTCGGGATACACCAACGAGTGCTT
CGCGGCGGCACTGGCCGGAGGGTTCATGGGGCTGGAGGAGACCCTGTGCCAGCAGCAGCCTGGCGCGATGCTCCCTGGCG
CCGCCGACGCGGCGACGCAAGGGTGTTACGCGGCGCAGGGAGGT---------------------TTCTTCGGCGGCGGC
GGTTGCACGGGCACCGTGATGTCGATGATGCTGGGGATGGAGGAGATGGGCGAGTACCAGAGGATGATGGAGGGCGGCGC
GCTGGTGGACGCCGACTCCGCGGGGCAGATGGCATTCCCTACCGCCGCGGAGATGCAGGTAGAAACCCAGAACGAATTCG
CCAAGAATCGCAATCGGTA---GTAGGACAGAGCATGACCGGTCGTTTCGCGGTGGTATAGATCGGAGGCAGCGGGAGCC
CCGGGCGGCTGCCGGCGGCGGGAGAGACCTCGAGCCTGGAGGACACGAGCTTCAAGGCCGCCCGCCTCTCCGTGGAGGAG
AGGAAGGAGAAGATCCACCGGTACATCAAGAAGAGGAACGAGCGGAACTTCAGCAAGAAGATCAAGGTGACCCACCAAAC
CAGAATCAATCACCATTAAAGGATCCATGCATGGTCCTCGACGCCGCTGACAT--CCGATCGGAAAACTGCAGTACGCGT
GCAGGAAAACCTTGGCGGACAGCAGGCCGCGCGTCCGCGGGAGGTTCGCCAAGAACGACGAGTACTGCGAAGCGTCCACG
GCGATCGGATCACAGAACCACGAGGAGTACGAGCAGATGGTAAGTCTGGATCAAATTTCATCAATCGCCAGCACCGGCTC
TGATACGACGACGACGAGCATGTCTCTAACGAG--TTTTCCATTTCAGCCGGGCGTGAAGGCGGAGGACATGCTCGACCC
CGACGCGCTGGCGCACATCAGCGGGATGAGCTCCTACATGTACAACCACACGGTGGAGTCGTGGATATAATCTGACTCAC
GACGAACACGAGCCC--GCTAATTCCATTTTTCAC-CAACCTATTTTACACGTGCAGATTTTTAACAGCCTGTTTAACTT
GATTTTGGTCCCGTGGAATAATTTTGTAGCTCCTGAAGCGGCGAGTTGAATTTACTTACCATGTAGGGTCGGCCGGTCTG
TTGTGTCAGTCGAAATCTGCTTTTCGCTTGTTGCAGCTAATTCTTGCAGGTGAATGTGAGGTTCTAGAGTTTGCAGAGGA
GTTGTGTACTTGG-TTTTTTTTAATAGAAAACACAGCTTCAGGGATCATGTATC--------TGGTCTTGCTCTTTTCCA
ATTCAACTGAACTCTGAGAATTGTAGGGATACAGGTAGACTATACGGGCGCAATTTTTTTT-----AATACGGAATAATG
AATTGTTGCTGCAATACATTATACTAAGATTTAGTACTAAAATGTGCAGACAATTCTAAAAGTAGAGTCGGTGTAGCGTG
TAGGTGCAAATGTAGTCATACTACTTTCTCCCCTTGCGGACCCCTCGAATAATTCGTTTATGCGTTGCAACTGCAGCCGC
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------
>SNPs
-----------S-------------------------S----------------------------S-------------
S-------------------------------------------------------------------------------
--------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS----------------------------------------------SSSSSSSSSSSSSSS
-----------SSSSSSSSSSSSSSSS-------------------------------------S---------------
----------------------------------------------S-S--S-----S-----------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S--S-----------------------S------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------S----------S
--------------------------------------------------------------------------------
------S------------------------------S------------------------------------------
-----------S---------------------------------------------------------------S----
------------------------------------------------S-------------------------------
-----------------------------------S--------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S--------S----------
-S-----------------------S---------------------------S--------------------------
-----------------------------------------------------------------S--------------
---S--------------------------------------------------S--------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------SS--SSSSSSSSSSSSSSSSSSSSS---SS----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S-----S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S---------------------------------------------S----------------------------
---------------------------------S----------------------------------------------
-------------------------------------------------------------------------S------
---------------SS---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
------------SS----------------------------------------SSSSSSSS------------------
-----------------------------------------------------S---S----S-SS------S-------
----------S---------------------------------------------S-S---S---S---------S---
--------------------------------------------------------------------------------
---------------S---S-------------S--SSS-S---S-S-SSSS-SS-S--SSSS-SS--SSSS-SSSSSS-
SSSSSSS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS--------SSSSSSS-S--SS-----S--S--S--S---SS-SSSS--SS--S-SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_191
--------------------------------------------------------------------------------
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-----------TTGCCAAATACTCCCTCCGT-------------------------------------------------
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>reverse_1292
--------------------------------------------------------------------------------
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-----------CACGGGATCCAGAAGAGGAG-------------------------------------------------
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>forward_1058
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AC
GATCAGTCCTTCACCGTG--------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------
>reverse_2449
--------------------------------------------------------------------------------
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------------------------------------------------CGACCCAGGGAGGTTTCTTC------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>forward_1356
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CCCCGTTGCAGTACAGAGG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>reverse_2450
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GACCCAGGGAGGTTTCTTCG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>forward_1476
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GCTTGGCCTGGCTTAAATTCC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>reverse_3046
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GGGATCACAGAACCACGAGG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>forward_2469
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GACCCAGGGAGGTTTCTTCG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>reverse_4242
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CGGAGGGAGCAGTTCACAAT--------------------
