Multiple sequence alignment - TraesCS1A01G113100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G113100 chr1A 100.000 2304 0 0 1 2304 115938837 115941140 0.000000e+00 4255.0
1 TraesCS1A01G113100 chr1A 98.204 167 3 0 1 167 94774932 94774766 2.240000e-75 292.0
2 TraesCS1A01G113100 chr1B 91.374 1681 107 15 360 2016 168330029 168331695 0.000000e+00 2266.0
3 TraesCS1A01G113100 chr1B 79.381 97 17 2 1552 1648 18211213 18211120 5.310000e-07 65.8
4 TraesCS1A01G113100 chr1D 92.276 1450 76 15 163 1585 110565725 110567165 0.000000e+00 2025.0
5 TraesCS1A01G113100 chr1D 88.750 400 16 8 1639 2016 110567169 110567561 1.610000e-126 462.0
6 TraesCS1A01G113100 chrUn 97.605 167 4 0 1 167 189394969 189394803 1.040000e-73 287.0
7 TraesCS1A01G113100 chr7D 97.605 167 4 0 1 167 203553916 203554082 1.040000e-73 287.0
8 TraesCS1A01G113100 chr7D 91.489 47 2 2 1567 1613 163564221 163564177 1.910000e-06 63.9
9 TraesCS1A01G113100 chr7D 89.130 46 5 0 1553 1598 7080208 7080163 8.890000e-05 58.4
10 TraesCS1A01G113100 chr7B 97.605 167 4 0 1 167 743088629 743088463 1.040000e-73 287.0
11 TraesCS1A01G113100 chr7A 97.605 167 4 0 1 167 4962272 4962106 1.040000e-73 287.0
12 TraesCS1A01G113100 chr5A 97.605 167 4 0 1 167 16600493 16600659 1.040000e-73 287.0
13 TraesCS1A01G113100 chr5A 97.605 167 4 0 1 167 300075409 300075243 1.040000e-73 287.0
14 TraesCS1A01G113100 chr4D 97.605 167 4 0 1 167 123415312 123415146 1.040000e-73 287.0
15 TraesCS1A01G113100 chr2A 97.605 167 4 0 1 167 618277526 618277692 1.040000e-73 287.0
16 TraesCS1A01G113100 chr6D 78.846 104 18 3 1548 1650 85798348 85798448 1.480000e-07 67.6
17 TraesCS1A01G113100 chr3B 91.489 47 4 0 1552 1598 644679731 644679777 5.310000e-07 65.8
18 TraesCS1A01G113100 chr6B 89.130 46 5 0 1554 1599 706132698 706132653 8.890000e-05 58.4
19 TraesCS1A01G113100 chr6B 76.923 104 20 3 1548 1650 162174590 162174690 3.200000e-04 56.5
20 TraesCS1A01G113100 chr2B 90.698 43 4 0 1553 1595 20142820 20142862 8.890000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G113100 chr1A 115938837 115941140 2303 False 4255.0 4255 100.000 1 2304 1 chr1A.!!$F1 2303
1 TraesCS1A01G113100 chr1B 168330029 168331695 1666 False 2266.0 2266 91.374 360 2016 1 chr1B.!!$F1 1656
2 TraesCS1A01G113100 chr1D 110565725 110567561 1836 False 1243.5 2025 90.513 163 2016 2 chr1D.!!$F1 1853

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
66 67 0.038892 TTAGTTTTCGCTCCGCTCGT 60.039 50.0 0.0 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1311 1332 0.81441 ATGAGAAGCCTCTGCGCATG 60.814 55.0 12.24 7.11 44.33 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.940209 TCAAAGGATTTCGCATGCTTT 57.060 38.095 17.13 4.52 39.68 3.51
21 22 3.836949 TCAAAGGATTTCGCATGCTTTC 58.163 40.909 17.13 6.79 37.54 2.62
22 23 2.925563 CAAAGGATTTCGCATGCTTTCC 59.074 45.455 17.13 15.17 37.54 3.13
23 24 1.838112 AGGATTTCGCATGCTTTCCA 58.162 45.000 17.13 0.00 0.00 3.53
24 25 2.381911 AGGATTTCGCATGCTTTCCAT 58.618 42.857 17.13 0.17 33.39 3.41
25 26 4.916591 AAAGGATTTCGCATGCTTTCCATG 60.917 41.667 17.13 0.00 44.33 3.66
26 27 7.863229 AAAGGATTTCGCATGCTTTCCATGG 62.863 44.000 17.13 4.97 42.73 3.66
46 47 2.428530 GGAATGACAGAATTCCCCTTGC 59.571 50.000 0.65 0.00 46.81 4.01
47 48 3.359950 GAATGACAGAATTCCCCTTGCT 58.640 45.455 0.65 0.00 31.52 3.91
48 49 2.978156 TGACAGAATTCCCCTTGCTT 57.022 45.000 0.65 0.00 0.00 3.91
49 50 4.591321 ATGACAGAATTCCCCTTGCTTA 57.409 40.909 0.65 0.00 0.00 3.09
50 51 3.955471 TGACAGAATTCCCCTTGCTTAG 58.045 45.455 0.65 0.00 0.00 2.18
51 52 3.330701 TGACAGAATTCCCCTTGCTTAGT 59.669 43.478 0.65 0.00 0.00 2.24
52 53 4.202567 TGACAGAATTCCCCTTGCTTAGTT 60.203 41.667 0.65 0.00 0.00 2.24
53 54 4.740902 ACAGAATTCCCCTTGCTTAGTTT 58.259 39.130 0.65 0.00 0.00 2.66
54 55 5.147767 ACAGAATTCCCCTTGCTTAGTTTT 58.852 37.500 0.65 0.00 0.00 2.43
55 56 5.243954 ACAGAATTCCCCTTGCTTAGTTTTC 59.756 40.000 0.65 0.00 0.00 2.29
56 57 4.459337 AGAATTCCCCTTGCTTAGTTTTCG 59.541 41.667 0.65 0.00 0.00 3.46
57 58 1.530323 TCCCCTTGCTTAGTTTTCGC 58.470 50.000 0.00 0.00 0.00 4.70
58 59 1.073284 TCCCCTTGCTTAGTTTTCGCT 59.927 47.619 0.00 0.00 0.00 4.93
59 60 1.468914 CCCCTTGCTTAGTTTTCGCTC 59.531 52.381 0.00 0.00 0.00 5.03
60 61 1.468914 CCCTTGCTTAGTTTTCGCTCC 59.531 52.381 0.00 0.00 0.00 4.70
61 62 1.128692 CCTTGCTTAGTTTTCGCTCCG 59.871 52.381 0.00 0.00 0.00 4.63
62 63 0.515564 TTGCTTAGTTTTCGCTCCGC 59.484 50.000 0.00 0.00 0.00 5.54
63 64 0.320421 TGCTTAGTTTTCGCTCCGCT 60.320 50.000 0.00 0.00 0.00 5.52
64 65 0.370615 GCTTAGTTTTCGCTCCGCTC 59.629 55.000 0.00 0.00 0.00 5.03
65 66 0.640768 CTTAGTTTTCGCTCCGCTCG 59.359 55.000 0.00 0.00 0.00 5.03
66 67 0.038892 TTAGTTTTCGCTCCGCTCGT 60.039 50.000 0.00 0.00 0.00 4.18
67 68 0.731514 TAGTTTTCGCTCCGCTCGTG 60.732 55.000 0.00 0.00 0.00 4.35
68 69 3.411351 TTTTCGCTCCGCTCGTGC 61.411 61.111 0.00 0.00 0.00 5.34
83 84 3.466881 TGCGTGGCACTCCTTACT 58.533 55.556 16.72 0.00 31.71 2.24
84 85 1.752198 TGCGTGGCACTCCTTACTT 59.248 52.632 16.72 0.00 31.71 2.24
85 86 0.602638 TGCGTGGCACTCCTTACTTG 60.603 55.000 16.72 0.00 31.71 3.16
86 87 1.912371 GCGTGGCACTCCTTACTTGC 61.912 60.000 16.72 4.30 35.40 4.01
87 88 1.626654 CGTGGCACTCCTTACTTGCG 61.627 60.000 16.72 0.00 37.11 4.85
88 89 1.003839 TGGCACTCCTTACTTGCGG 60.004 57.895 0.00 0.00 37.11 5.69
89 90 1.295423 GGCACTCCTTACTTGCGGA 59.705 57.895 0.00 0.00 37.11 5.54
103 104 2.338620 CGGAGCGGCATATCGGAA 59.661 61.111 1.45 0.00 0.00 4.30
104 105 1.300620 CGGAGCGGCATATCGGAAA 60.301 57.895 1.45 0.00 0.00 3.13
105 106 0.878523 CGGAGCGGCATATCGGAAAA 60.879 55.000 1.45 0.00 0.00 2.29
106 107 1.305201 GGAGCGGCATATCGGAAAAA 58.695 50.000 1.45 0.00 0.00 1.94
107 108 1.264288 GGAGCGGCATATCGGAAAAAG 59.736 52.381 1.45 0.00 0.00 2.27
108 109 2.210116 GAGCGGCATATCGGAAAAAGA 58.790 47.619 1.45 0.00 0.00 2.52
109 110 2.612212 GAGCGGCATATCGGAAAAAGAA 59.388 45.455 1.45 0.00 0.00 2.52
110 111 2.614057 AGCGGCATATCGGAAAAAGAAG 59.386 45.455 1.45 0.00 0.00 2.85
111 112 2.287009 GCGGCATATCGGAAAAAGAAGG 60.287 50.000 0.00 0.00 0.00 3.46
112 113 3.202906 CGGCATATCGGAAAAAGAAGGA 58.797 45.455 0.00 0.00 0.00 3.36
113 114 3.815401 CGGCATATCGGAAAAAGAAGGAT 59.185 43.478 0.00 0.00 0.00 3.24
114 115 4.275936 CGGCATATCGGAAAAAGAAGGATT 59.724 41.667 0.00 0.00 0.00 3.01
115 116 5.523369 GGCATATCGGAAAAAGAAGGATTG 58.477 41.667 0.00 0.00 0.00 2.67
116 117 5.299279 GGCATATCGGAAAAAGAAGGATTGA 59.701 40.000 0.00 0.00 0.00 2.57
117 118 6.202226 GCATATCGGAAAAAGAAGGATTGAC 58.798 40.000 0.00 0.00 0.00 3.18
118 119 6.038714 GCATATCGGAAAAAGAAGGATTGACT 59.961 38.462 0.00 0.00 0.00 3.41
119 120 7.415653 GCATATCGGAAAAAGAAGGATTGACTT 60.416 37.037 0.00 0.00 0.00 3.01
120 121 6.901081 ATCGGAAAAAGAAGGATTGACTTT 57.099 33.333 0.00 0.00 35.74 2.66
121 122 6.313744 TCGGAAAAAGAAGGATTGACTTTC 57.686 37.500 0.00 0.00 33.58 2.62
122 123 6.062095 TCGGAAAAAGAAGGATTGACTTTCT 58.938 36.000 0.00 0.00 44.82 2.52
123 124 7.221450 TCGGAAAAAGAAGGATTGACTTTCTA 58.779 34.615 0.00 0.00 42.68 2.10
124 125 7.883311 TCGGAAAAAGAAGGATTGACTTTCTAT 59.117 33.333 0.00 0.00 42.68 1.98
125 126 9.162764 CGGAAAAAGAAGGATTGACTTTCTATA 57.837 33.333 0.00 0.00 42.68 1.31
127 128 9.974750 GAAAAAGAAGGATTGACTTTCTATACG 57.025 33.333 0.00 0.00 42.68 3.06
128 129 8.494016 AAAAGAAGGATTGACTTTCTATACGG 57.506 34.615 0.00 0.00 42.68 4.02
129 130 6.163135 AGAAGGATTGACTTTCTATACGGG 57.837 41.667 0.00 0.00 41.91 5.28
130 131 4.338379 AGGATTGACTTTCTATACGGGC 57.662 45.455 0.00 0.00 0.00 6.13
131 132 3.071167 AGGATTGACTTTCTATACGGGCC 59.929 47.826 0.00 0.00 0.00 5.80
132 133 3.071167 GGATTGACTTTCTATACGGGCCT 59.929 47.826 0.84 0.00 0.00 5.19
133 134 3.536956 TTGACTTTCTATACGGGCCTG 57.463 47.619 11.02 11.02 0.00 4.85
134 135 2.463752 TGACTTTCTATACGGGCCTGT 58.536 47.619 23.52 23.52 0.00 4.00
135 136 2.429610 TGACTTTCTATACGGGCCTGTC 59.570 50.000 23.73 3.62 0.00 3.51
136 137 1.761198 ACTTTCTATACGGGCCTGTCC 59.239 52.381 23.73 0.00 0.00 4.02
145 146 3.321445 GGCCTGTCCCCTCTTACC 58.679 66.667 0.00 0.00 0.00 2.85
146 147 2.376165 GGCCTGTCCCCTCTTACCC 61.376 68.421 0.00 0.00 0.00 3.69
147 148 2.376165 GCCTGTCCCCTCTTACCCC 61.376 68.421 0.00 0.00 0.00 4.95
148 149 1.396594 CCTGTCCCCTCTTACCCCT 59.603 63.158 0.00 0.00 0.00 4.79
149 150 0.640495 CCTGTCCCCTCTTACCCCTA 59.360 60.000 0.00 0.00 0.00 3.53
150 151 1.009183 CCTGTCCCCTCTTACCCCTAA 59.991 57.143 0.00 0.00 0.00 2.69
151 152 2.361504 CCTGTCCCCTCTTACCCCTAAT 60.362 54.545 0.00 0.00 0.00 1.73
152 153 3.394645 CTGTCCCCTCTTACCCCTAATT 58.605 50.000 0.00 0.00 0.00 1.40
153 154 4.563782 CTGTCCCCTCTTACCCCTAATTA 58.436 47.826 0.00 0.00 0.00 1.40
154 155 4.973211 CTGTCCCCTCTTACCCCTAATTAA 59.027 45.833 0.00 0.00 0.00 1.40
155 156 4.723285 TGTCCCCTCTTACCCCTAATTAAC 59.277 45.833 0.00 0.00 0.00 2.01
156 157 4.723285 GTCCCCTCTTACCCCTAATTAACA 59.277 45.833 0.00 0.00 0.00 2.41
157 158 5.192321 GTCCCCTCTTACCCCTAATTAACAA 59.808 44.000 0.00 0.00 0.00 2.83
158 159 5.980640 TCCCCTCTTACCCCTAATTAACAAT 59.019 40.000 0.00 0.00 0.00 2.71
159 160 6.452330 TCCCCTCTTACCCCTAATTAACAATT 59.548 38.462 0.00 0.00 34.90 2.32
160 161 7.632573 TCCCCTCTTACCCCTAATTAACAATTA 59.367 37.037 0.00 0.00 32.38 1.40
161 162 8.453681 CCCCTCTTACCCCTAATTAACAATTAT 58.546 37.037 0.00 0.00 33.21 1.28
162 163 9.297037 CCCTCTTACCCCTAATTAACAATTATG 57.703 37.037 0.00 0.00 33.21 1.90
163 164 8.793592 CCTCTTACCCCTAATTAACAATTATGC 58.206 37.037 0.00 0.00 33.21 3.14
164 165 9.574516 CTCTTACCCCTAATTAACAATTATGCT 57.425 33.333 0.00 0.00 33.21 3.79
165 166 9.349713 TCTTACCCCTAATTAACAATTATGCTG 57.650 33.333 0.00 0.00 33.21 4.41
166 167 6.405278 ACCCCTAATTAACAATTATGCTGC 57.595 37.500 0.00 0.00 33.21 5.25
181 182 1.829533 CTGCAACCAAGTGGGCAGT 60.830 57.895 16.28 0.00 42.10 4.40
184 185 1.455587 CAACCAAGTGGGCAGTGGT 60.456 57.895 1.69 0.00 42.05 4.16
210 211 0.533032 AGTAAGCAGAGGGTTCTCGC 59.467 55.000 0.00 0.00 44.47 5.03
236 237 1.675641 GTGCGAAGGTTCCATGCCT 60.676 57.895 0.00 0.00 38.11 4.75
237 238 1.675310 TGCGAAGGTTCCATGCCTG 60.675 57.895 0.00 0.00 36.30 4.85
243 244 3.254657 CGAAGGTTCCATGCCTGTTTTTA 59.745 43.478 0.00 0.00 36.30 1.52
244 245 4.556233 GAAGGTTCCATGCCTGTTTTTAC 58.444 43.478 0.00 0.00 36.30 2.01
246 247 3.573967 AGGTTCCATGCCTGTTTTTACTG 59.426 43.478 0.00 0.00 34.56 2.74
254 255 5.606348 TGCCTGTTTTTACTGATTTTGGT 57.394 34.783 0.00 0.00 0.00 3.67
259 260 7.685884 GCCTGTTTTTACTGATTTTGGTAACCT 60.686 37.037 0.00 0.00 0.00 3.50
260 261 8.201464 CCTGTTTTTACTGATTTTGGTAACCTT 58.799 33.333 0.00 0.00 0.00 3.50
261 262 9.244799 CTGTTTTTACTGATTTTGGTAACCTTC 57.755 33.333 0.00 0.00 0.00 3.46
302 303 5.572896 CAGTTTTCTCTTCGTTGTTGCTTTT 59.427 36.000 0.00 0.00 0.00 2.27
326 327 1.991121 ACCCTTTTTCCCGGTCTTTC 58.009 50.000 0.00 0.00 0.00 2.62
328 329 2.312390 CCCTTTTTCCCGGTCTTTCAA 58.688 47.619 0.00 0.00 0.00 2.69
343 344 8.233868 CCGGTCTTTCAATTTTTGTTTCTTTTT 58.766 29.630 0.00 0.00 0.00 1.94
534 539 2.959372 GGCAACTAAACACGCCCC 59.041 61.111 0.00 0.00 38.67 5.80
535 540 2.559330 GCAACTAAACACGCCCCG 59.441 61.111 0.00 0.00 0.00 5.73
553 558 3.440872 CCCCGGTGATTTGATTTTCGTAA 59.559 43.478 0.00 0.00 0.00 3.18
611 622 7.951565 GCAATATAATGCGCATTAATCAAAACC 59.048 33.333 38.12 20.98 36.90 3.27
650 661 1.204704 AGTGAATCTGATTCGGCGTCA 59.795 47.619 21.70 3.00 42.15 4.35
733 744 1.135689 CCAAACGCATAGACAGCCAAC 60.136 52.381 0.00 0.00 0.00 3.77
862 873 0.179062 CAGCGAATTCCAGGAGAGGG 60.179 60.000 0.00 0.00 0.00 4.30
947 967 0.868406 GAACGTGAGGACAAGGCAAG 59.132 55.000 0.00 0.00 0.00 4.01
975 995 4.747265 AGGAGAGAGATAGAGGCATCTT 57.253 45.455 6.05 0.00 35.37 2.40
976 996 4.666512 AGGAGAGAGATAGAGGCATCTTC 58.333 47.826 6.05 4.34 35.37 2.87
978 998 5.551583 AGGAGAGAGATAGAGGCATCTTCTA 59.448 44.000 6.05 0.00 35.37 2.10
979 999 6.218315 AGGAGAGAGATAGAGGCATCTTCTAT 59.782 42.308 6.05 6.80 35.37 1.98
1014 1034 2.044946 GCCATGGCGAGAACCCTT 60.045 61.111 23.48 0.00 0.00 3.95
1028 1048 0.382873 ACCCTTTTTGGTTTCGTCGC 59.617 50.000 0.00 0.00 33.91 5.19
1134 1154 2.098770 GCCATCAAACTCCAGCATCTTC 59.901 50.000 0.00 0.00 0.00 2.87
1148 1169 2.100418 GCATCTTCCCCTTCTGAATTGC 59.900 50.000 0.00 0.00 0.00 3.56
1161 1182 3.828451 TCTGAATTGCTTTTCCCTTCTGG 59.172 43.478 0.00 0.00 0.00 3.86
1170 1191 4.666512 CTTTTCCCTTCTGGATTTCCTCA 58.333 43.478 0.00 0.00 44.66 3.86
1213 1234 4.477975 GCGTCCTCGGTCGACCAG 62.478 72.222 32.80 25.88 37.56 4.00
1341 1362 5.240183 CAGAGGCTTCTCATTCTTTTGTTCA 59.760 40.000 0.00 0.00 39.91 3.18
1354 1375 8.749499 CATTCTTTTGTTCATCTTTCTGTTGTC 58.251 33.333 0.00 0.00 0.00 3.18
1358 1379 3.807622 TGTTCATCTTTCTGTTGTCCGTC 59.192 43.478 0.00 0.00 0.00 4.79
1431 1452 9.977762 GATTTGAATTCATTAATTTGTTGCTCC 57.022 29.630 9.40 0.00 35.41 4.70
1482 1503 5.220265 CGTGCATATTTTTGTTCCAATGCTC 60.220 40.000 6.65 2.61 40.22 4.26
1527 1548 1.022735 CGTACTAGTCATCAGCCCGT 58.977 55.000 0.00 0.00 0.00 5.28
1528 1549 1.268589 CGTACTAGTCATCAGCCCGTG 60.269 57.143 0.00 0.00 0.00 4.94
1560 1594 6.555812 CAATTCATGCATGCATAGTACTCT 57.444 37.500 31.73 6.60 34.91 3.24
1563 1597 5.541953 TCATGCATGCATAGTACTCTCTT 57.458 39.130 31.73 4.38 34.91 2.85
1564 1598 5.922053 TCATGCATGCATAGTACTCTCTTT 58.078 37.500 31.73 4.16 34.91 2.52
1625 1659 3.411808 TCGTGGCACGACACTTATC 57.588 52.632 36.29 0.00 46.73 1.75
1628 1662 2.488937 TCGTGGCACGACACTTATCTTA 59.511 45.455 36.29 12.00 46.73 2.10
1633 1667 3.975670 GGCACGACACTTATCTTAGATCG 59.024 47.826 0.00 0.00 35.18 3.69
1635 1669 4.261072 GCACGACACTTATCTTAGATCGGA 60.261 45.833 0.00 0.00 34.16 4.55
1637 1671 5.236695 CACGACACTTATCTTAGATCGGAGA 59.763 44.000 0.00 3.97 45.75 3.71
1806 1861 4.536295 ATTGGGTTCTAATTAGGGGGTG 57.464 45.455 12.54 0.00 0.00 4.61
1851 1906 6.843208 ACGATGTAGGACATATGAACGATAG 58.157 40.000 10.38 0.00 39.27 2.08
1890 1945 6.935208 ACTCTAGAATACGAAAAATATGCCCC 59.065 38.462 0.00 0.00 0.00 5.80
1901 1956 6.020201 CGAAAAATATGCCCCGTAAAACATTC 60.020 38.462 0.00 0.00 0.00 2.67
1902 1957 5.923733 AAATATGCCCCGTAAAACATTCA 57.076 34.783 0.00 0.00 0.00 2.57
1969 2028 8.299570 ACAAAATTAGCACCTTATGTTGAAGAG 58.700 33.333 2.25 0.00 26.91 2.85
2016 2075 9.008965 AGAAATGCAAACTTTAAAAGTGGTTTT 57.991 25.926 0.00 0.00 41.91 2.43
2017 2076 9.272901 GAAATGCAAACTTTAAAAGTGGTTTTC 57.727 29.630 0.00 0.00 41.91 2.29
2018 2077 7.913674 ATGCAAACTTTAAAAGTGGTTTTCA 57.086 28.000 0.00 5.89 41.91 2.69
2019 2078 7.730364 TGCAAACTTTAAAAGTGGTTTTCAA 57.270 28.000 0.00 0.00 41.91 2.69
2020 2079 8.329203 TGCAAACTTTAAAAGTGGTTTTCAAT 57.671 26.923 0.00 0.00 41.91 2.57
2021 2080 8.787852 TGCAAACTTTAAAAGTGGTTTTCAATT 58.212 25.926 0.00 0.00 41.91 2.32
2022 2081 9.619316 GCAAACTTTAAAAGTGGTTTTCAATTT 57.381 25.926 0.00 0.00 44.30 1.82
2026 2085 9.719355 ACTTTAAAAGTGGTTTTCAATTTCTGT 57.281 25.926 0.00 0.00 42.00 3.41
2027 2086 9.971744 CTTTAAAAGTGGTTTTCAATTTCTGTG 57.028 29.630 0.00 0.00 42.00 3.66
2028 2087 9.495572 TTTAAAAGTGGTTTTCAATTTCTGTGT 57.504 25.926 0.00 0.00 42.00 3.72
2031 2090 9.495572 AAAAGTGGTTTTCAATTTCTGTGTAAA 57.504 25.926 0.00 0.00 42.00 2.01
2032 2091 9.665719 AAAGTGGTTTTCAATTTCTGTGTAAAT 57.334 25.926 0.00 0.00 39.10 1.40
2074 2133 9.757227 AGAGAATGTAAATAGATGAGTTAGTGC 57.243 33.333 0.00 0.00 0.00 4.40
2075 2134 9.534565 GAGAATGTAAATAGATGAGTTAGTGCA 57.465 33.333 0.00 0.00 0.00 4.57
2076 2135 9.539825 AGAATGTAAATAGATGAGTTAGTGCAG 57.460 33.333 0.00 0.00 0.00 4.41
2077 2136 9.319143 GAATGTAAATAGATGAGTTAGTGCAGT 57.681 33.333 0.00 0.00 0.00 4.40
2078 2137 9.672673 AATGTAAATAGATGAGTTAGTGCAGTT 57.327 29.630 0.00 0.00 0.00 3.16
2084 2143 9.726438 AATAGATGAGTTAGTGCAGTTAAAACT 57.274 29.630 7.72 7.72 40.60 2.66
2085 2144 9.726438 ATAGATGAGTTAGTGCAGTTAAAACTT 57.274 29.630 9.09 0.00 37.08 2.66
2086 2145 8.451908 AGATGAGTTAGTGCAGTTAAAACTTT 57.548 30.769 9.09 2.08 37.08 2.66
2087 2146 8.903820 AGATGAGTTAGTGCAGTTAAAACTTTT 58.096 29.630 9.09 1.80 37.08 2.27
2088 2147 9.170584 GATGAGTTAGTGCAGTTAAAACTTTTC 57.829 33.333 9.09 6.42 37.08 2.29
2089 2148 8.046294 TGAGTTAGTGCAGTTAAAACTTTTCA 57.954 30.769 9.09 2.14 37.08 2.69
2090 2149 8.516234 TGAGTTAGTGCAGTTAAAACTTTTCAA 58.484 29.630 9.09 0.00 37.08 2.69
2091 2150 9.349145 GAGTTAGTGCAGTTAAAACTTTTCAAA 57.651 29.630 9.09 0.00 37.08 2.69
2092 2151 9.135843 AGTTAGTGCAGTTAAAACTTTTCAAAC 57.864 29.630 0.00 0.00 37.08 2.93
2093 2152 9.135843 GTTAGTGCAGTTAAAACTTTTCAAACT 57.864 29.630 0.00 0.00 37.08 2.66
2094 2153 9.699703 TTAGTGCAGTTAAAACTTTTCAAACTT 57.300 25.926 0.00 0.00 37.08 2.66
2095 2154 8.601845 AGTGCAGTTAAAACTTTTCAAACTTT 57.398 26.923 0.00 0.00 37.08 2.66
2096 2155 8.495148 AGTGCAGTTAAAACTTTTCAAACTTTG 58.505 29.630 0.00 0.00 37.08 2.77
2097 2156 8.491950 GTGCAGTTAAAACTTTTCAAACTTTGA 58.508 29.630 0.00 0.00 37.08 2.69
2098 2157 8.491950 TGCAGTTAAAACTTTTCAAACTTTGAC 58.508 29.630 3.56 0.00 36.88 3.18
2099 2158 8.491950 GCAGTTAAAACTTTTCAAACTTTGACA 58.508 29.630 3.56 0.00 36.88 3.58
2101 2160 9.758651 AGTTAAAACTTTTCAAACTTTGACAGT 57.241 25.926 3.56 6.70 36.05 3.55
2107 2166 8.788325 ACTTTTCAAACTTTGACAGTACTAGT 57.212 30.769 11.54 0.00 39.87 2.57
2108 2167 9.227777 ACTTTTCAAACTTTGACAGTACTAGTT 57.772 29.630 0.00 0.00 39.87 2.24
2109 2168 9.490663 CTTTTCAAACTTTGACAGTACTAGTTG 57.509 33.333 0.00 0.00 39.87 3.16
2110 2169 8.780846 TTTCAAACTTTGACAGTACTAGTTGA 57.219 30.769 0.00 6.27 39.87 3.18
2111 2170 8.958119 TTCAAACTTTGACAGTACTAGTTGAT 57.042 30.769 0.00 0.00 39.87 2.57
2175 2234 2.858729 GCATTAACATGCGCCTTCG 58.141 52.632 4.18 0.00 46.45 3.79
2187 2246 0.572590 CGCCTTCGCTAATTCTGTCG 59.427 55.000 0.00 0.00 0.00 4.35
2188 2247 1.797713 CGCCTTCGCTAATTCTGTCGA 60.798 52.381 0.00 0.00 0.00 4.20
2189 2248 1.588861 GCCTTCGCTAATTCTGTCGAC 59.411 52.381 9.11 9.11 0.00 4.20
2190 2249 1.846782 CCTTCGCTAATTCTGTCGACG 59.153 52.381 11.62 6.07 0.00 5.12
2191 2250 2.477357 CCTTCGCTAATTCTGTCGACGA 60.477 50.000 11.62 8.49 0.00 4.20
2192 2251 2.905959 TCGCTAATTCTGTCGACGAA 57.094 45.000 19.74 19.74 0.00 3.85
2193 2252 2.512885 TCGCTAATTCTGTCGACGAAC 58.487 47.619 19.82 10.06 0.00 3.95
2194 2253 1.582502 CGCTAATTCTGTCGACGAACC 59.417 52.381 19.82 10.91 0.00 3.62
2195 2254 2.602878 GCTAATTCTGTCGACGAACCA 58.397 47.619 19.82 12.22 0.00 3.67
2196 2255 3.187700 GCTAATTCTGTCGACGAACCAT 58.812 45.455 19.82 13.59 0.00 3.55
2197 2256 3.000322 GCTAATTCTGTCGACGAACCATG 60.000 47.826 19.82 13.29 0.00 3.66
2198 2257 1.359848 ATTCTGTCGACGAACCATGC 58.640 50.000 19.82 0.00 0.00 4.06
2199 2258 0.317160 TTCTGTCGACGAACCATGCT 59.683 50.000 11.62 0.00 0.00 3.79
2200 2259 0.388520 TCTGTCGACGAACCATGCTG 60.389 55.000 11.62 0.00 0.00 4.41
2201 2260 1.354337 CTGTCGACGAACCATGCTGG 61.354 60.000 11.62 1.16 45.02 4.85
2202 2261 1.080093 GTCGACGAACCATGCTGGA 60.080 57.895 0.00 0.00 40.96 3.86
2203 2262 1.080093 TCGACGAACCATGCTGGAC 60.080 57.895 8.91 2.87 40.96 4.02
2204 2263 1.374125 CGACGAACCATGCTGGACA 60.374 57.895 8.91 0.00 40.96 4.02
2205 2264 1.626654 CGACGAACCATGCTGGACAC 61.627 60.000 8.91 0.62 40.96 3.67
2206 2265 0.320771 GACGAACCATGCTGGACACT 60.321 55.000 8.91 0.00 40.96 3.55
2207 2266 0.973632 ACGAACCATGCTGGACACTA 59.026 50.000 8.91 0.00 40.96 2.74
2208 2267 1.346395 ACGAACCATGCTGGACACTAA 59.654 47.619 8.91 0.00 40.96 2.24
2209 2268 2.027192 ACGAACCATGCTGGACACTAAT 60.027 45.455 8.91 0.00 40.96 1.73
2210 2269 2.352651 CGAACCATGCTGGACACTAATG 59.647 50.000 8.91 0.00 40.96 1.90
2211 2270 2.425143 ACCATGCTGGACACTAATGG 57.575 50.000 8.91 0.00 40.96 3.16
2212 2271 1.635487 ACCATGCTGGACACTAATGGT 59.365 47.619 8.91 0.00 44.80 3.55
2213 2272 3.558931 CCATGCTGGACACTAATGGTA 57.441 47.619 0.00 0.00 40.96 3.25
2214 2273 3.884895 CCATGCTGGACACTAATGGTAA 58.115 45.455 0.00 0.00 40.96 2.85
2215 2274 4.269183 CCATGCTGGACACTAATGGTAAA 58.731 43.478 0.00 0.00 40.96 2.01
2216 2275 4.889409 CCATGCTGGACACTAATGGTAAAT 59.111 41.667 0.00 0.00 40.96 1.40
2217 2276 6.061441 CCATGCTGGACACTAATGGTAAATA 58.939 40.000 0.00 0.00 40.96 1.40
2218 2277 6.716628 CCATGCTGGACACTAATGGTAAATAT 59.283 38.462 0.00 0.00 40.96 1.28
2219 2278 7.231317 CCATGCTGGACACTAATGGTAAATATT 59.769 37.037 0.00 0.00 40.96 1.28
2220 2279 9.283768 CATGCTGGACACTAATGGTAAATATTA 57.716 33.333 0.00 0.00 0.00 0.98
2221 2280 9.860650 ATGCTGGACACTAATGGTAAATATTAA 57.139 29.630 0.00 0.00 0.00 1.40
2222 2281 9.688091 TGCTGGACACTAATGGTAAATATTAAA 57.312 29.630 0.00 0.00 0.00 1.52
2243 2302 9.985730 ATTAAAAACTCATGTGTCAATGTGAAT 57.014 25.926 0.03 0.00 0.00 2.57
2244 2303 9.814899 TTAAAAACTCATGTGTCAATGTGAATT 57.185 25.926 0.03 0.00 0.00 2.17
2245 2304 7.703298 AAAACTCATGTGTCAATGTGAATTG 57.297 32.000 0.03 0.00 0.00 2.32
2246 2305 6.638096 AACTCATGTGTCAATGTGAATTGA 57.362 33.333 0.03 0.00 38.14 2.57
2247 2306 6.638096 ACTCATGTGTCAATGTGAATTGAA 57.362 33.333 2.86 0.00 41.61 2.69
2248 2307 7.041635 ACTCATGTGTCAATGTGAATTGAAA 57.958 32.000 2.86 0.00 41.61 2.69
2249 2308 7.490840 ACTCATGTGTCAATGTGAATTGAAAA 58.509 30.769 2.86 0.00 41.61 2.29
2250 2309 8.145767 ACTCATGTGTCAATGTGAATTGAAAAT 58.854 29.630 2.86 0.00 41.61 1.82
2251 2310 8.300495 TCATGTGTCAATGTGAATTGAAAATG 57.700 30.769 2.86 7.48 41.61 2.32
2252 2311 7.385478 TCATGTGTCAATGTGAATTGAAAATGG 59.615 33.333 2.86 0.00 41.61 3.16
2253 2312 6.580788 TGTGTCAATGTGAATTGAAAATGGT 58.419 32.000 2.86 0.00 41.61 3.55
2254 2313 6.479331 TGTGTCAATGTGAATTGAAAATGGTG 59.521 34.615 2.86 0.00 41.61 4.17
2255 2314 6.700960 GTGTCAATGTGAATTGAAAATGGTGA 59.299 34.615 2.86 0.00 41.61 4.02
2256 2315 7.385752 GTGTCAATGTGAATTGAAAATGGTGAT 59.614 33.333 2.86 0.00 41.61 3.06
2257 2316 7.385478 TGTCAATGTGAATTGAAAATGGTGATG 59.615 33.333 2.86 0.00 41.61 3.07
2258 2317 7.385752 GTCAATGTGAATTGAAAATGGTGATGT 59.614 33.333 2.86 0.00 41.61 3.06
2259 2318 7.932491 TCAATGTGAATTGAAAATGGTGATGTT 59.068 29.630 0.00 0.00 37.59 2.71
2260 2319 7.661127 ATGTGAATTGAAAATGGTGATGTTG 57.339 32.000 0.00 0.00 0.00 3.33
2261 2320 6.814043 TGTGAATTGAAAATGGTGATGTTGA 58.186 32.000 0.00 0.00 0.00 3.18
2262 2321 7.270779 TGTGAATTGAAAATGGTGATGTTGAA 58.729 30.769 0.00 0.00 0.00 2.69
2263 2322 7.932491 TGTGAATTGAAAATGGTGATGTTGAAT 59.068 29.630 0.00 0.00 0.00 2.57
2264 2323 8.776470 GTGAATTGAAAATGGTGATGTTGAATT 58.224 29.630 0.00 0.00 28.41 2.17
2265 2324 9.339850 TGAATTGAAAATGGTGATGTTGAATTT 57.660 25.926 0.00 0.00 26.56 1.82
2266 2325 9.601971 GAATTGAAAATGGTGATGTTGAATTTG 57.398 29.630 0.00 0.00 26.56 2.32
2267 2326 6.542574 TGAAAATGGTGATGTTGAATTTGC 57.457 33.333 0.00 0.00 0.00 3.68
2268 2327 6.053650 TGAAAATGGTGATGTTGAATTTGCA 58.946 32.000 0.00 0.00 0.00 4.08
2269 2328 5.927954 AAATGGTGATGTTGAATTTGCAC 57.072 34.783 0.00 0.00 0.00 4.57
2270 2329 3.010624 TGGTGATGTTGAATTTGCACG 57.989 42.857 0.00 0.00 0.00 5.34
2271 2330 1.720852 GGTGATGTTGAATTTGCACGC 59.279 47.619 0.00 0.00 0.00 5.34
2272 2331 2.607771 GGTGATGTTGAATTTGCACGCT 60.608 45.455 0.00 0.00 0.00 5.07
2273 2332 3.052036 GTGATGTTGAATTTGCACGCTT 58.948 40.909 0.00 0.00 0.00 4.68
2274 2333 3.051327 TGATGTTGAATTTGCACGCTTG 58.949 40.909 0.00 0.00 0.00 4.01
2275 2334 1.850377 TGTTGAATTTGCACGCTTGG 58.150 45.000 0.00 0.00 0.00 3.61
2276 2335 1.135915 TGTTGAATTTGCACGCTTGGT 59.864 42.857 0.00 0.00 0.00 3.67
2277 2336 2.359214 TGTTGAATTTGCACGCTTGGTA 59.641 40.909 0.00 0.00 0.00 3.25
2278 2337 2.697431 TGAATTTGCACGCTTGGTAC 57.303 45.000 0.00 0.00 0.00 3.34
2279 2338 1.950216 TGAATTTGCACGCTTGGTACA 59.050 42.857 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.367292 GGAAAGCATGCGAAATCCTTTGA 60.367 43.478 13.01 0.00 0.00 2.69
2 3 2.562298 TGGAAAGCATGCGAAATCCTTT 59.438 40.909 24.45 14.39 0.00 3.11
4 5 1.838112 TGGAAAGCATGCGAAATCCT 58.162 45.000 24.45 2.24 0.00 3.24
5 6 2.466846 CATGGAAAGCATGCGAAATCC 58.533 47.619 20.29 20.29 0.00 3.01
6 7 2.099592 TCCATGGAAAGCATGCGAAATC 59.900 45.455 13.46 9.09 0.00 2.17
7 8 2.101783 TCCATGGAAAGCATGCGAAAT 58.898 42.857 13.46 0.00 0.00 2.17
8 9 1.543607 TCCATGGAAAGCATGCGAAA 58.456 45.000 13.46 0.00 0.00 3.46
9 10 1.543607 TTCCATGGAAAGCATGCGAA 58.456 45.000 25.13 4.13 0.00 4.70
10 11 1.406180 CATTCCATGGAAAGCATGCGA 59.594 47.619 30.28 5.27 37.69 5.10
11 12 1.406180 TCATTCCATGGAAAGCATGCG 59.594 47.619 30.28 12.82 37.69 4.73
12 13 2.166870 TGTCATTCCATGGAAAGCATGC 59.833 45.455 30.28 18.30 37.69 4.06
13 14 3.697542 TCTGTCATTCCATGGAAAGCATG 59.302 43.478 30.28 22.68 37.69 4.06
14 15 3.972133 TCTGTCATTCCATGGAAAGCAT 58.028 40.909 30.28 11.92 37.69 3.79
15 16 3.438216 TCTGTCATTCCATGGAAAGCA 57.562 42.857 30.28 24.34 37.69 3.91
16 17 4.996788 ATTCTGTCATTCCATGGAAAGC 57.003 40.909 30.28 21.51 37.69 3.51
26 27 3.359950 AGCAAGGGGAATTCTGTCATTC 58.640 45.455 5.23 0.00 33.04 2.67
27 28 3.463048 AGCAAGGGGAATTCTGTCATT 57.537 42.857 5.23 0.00 0.00 2.57
28 29 3.463048 AAGCAAGGGGAATTCTGTCAT 57.537 42.857 5.23 0.00 0.00 3.06
29 30 2.978156 AAGCAAGGGGAATTCTGTCA 57.022 45.000 5.23 0.00 0.00 3.58
30 31 3.956744 ACTAAGCAAGGGGAATTCTGTC 58.043 45.455 5.23 0.00 0.00 3.51
31 32 4.388577 AACTAAGCAAGGGGAATTCTGT 57.611 40.909 5.23 0.00 0.00 3.41
32 33 5.619981 CGAAAACTAAGCAAGGGGAATTCTG 60.620 44.000 5.23 0.00 0.00 3.02
33 34 4.459337 CGAAAACTAAGCAAGGGGAATTCT 59.541 41.667 5.23 0.00 0.00 2.40
34 35 4.733850 CGAAAACTAAGCAAGGGGAATTC 58.266 43.478 0.00 0.00 0.00 2.17
35 36 3.056821 GCGAAAACTAAGCAAGGGGAATT 60.057 43.478 0.00 0.00 0.00 2.17
36 37 2.492088 GCGAAAACTAAGCAAGGGGAAT 59.508 45.455 0.00 0.00 0.00 3.01
37 38 1.883926 GCGAAAACTAAGCAAGGGGAA 59.116 47.619 0.00 0.00 0.00 3.97
38 39 1.073284 AGCGAAAACTAAGCAAGGGGA 59.927 47.619 0.00 0.00 0.00 4.81
39 40 1.468914 GAGCGAAAACTAAGCAAGGGG 59.531 52.381 0.00 0.00 0.00 4.79
40 41 1.468914 GGAGCGAAAACTAAGCAAGGG 59.531 52.381 0.00 0.00 0.00 3.95
41 42 1.128692 CGGAGCGAAAACTAAGCAAGG 59.871 52.381 0.00 0.00 0.00 3.61
42 43 2.510615 CGGAGCGAAAACTAAGCAAG 57.489 50.000 0.00 0.00 0.00 4.01
66 67 0.602638 CAAGTAAGGAGTGCCACGCA 60.603 55.000 0.00 0.00 36.29 5.24
67 68 1.912371 GCAAGTAAGGAGTGCCACGC 61.912 60.000 0.00 0.00 36.29 5.34
68 69 1.626654 CGCAAGTAAGGAGTGCCACG 61.627 60.000 0.00 0.00 34.73 4.94
69 70 1.298859 CCGCAAGTAAGGAGTGCCAC 61.299 60.000 0.00 0.00 34.73 5.01
70 71 1.003839 CCGCAAGTAAGGAGTGCCA 60.004 57.895 0.00 0.00 34.73 4.92
71 72 0.741221 CTCCGCAAGTAAGGAGTGCC 60.741 60.000 3.49 0.00 46.68 5.01
72 73 2.755929 CTCCGCAAGTAAGGAGTGC 58.244 57.895 3.49 0.00 46.68 4.40
76 77 2.577059 CCGCTCCGCAAGTAAGGA 59.423 61.111 0.00 0.00 34.93 3.36
77 78 3.195698 GCCGCTCCGCAAGTAAGG 61.196 66.667 0.00 0.00 0.00 2.69
78 79 0.529773 TATGCCGCTCCGCAAGTAAG 60.530 55.000 0.00 0.00 43.24 2.34
79 80 0.105964 ATATGCCGCTCCGCAAGTAA 59.894 50.000 0.00 0.00 43.24 2.24
80 81 0.319555 GATATGCCGCTCCGCAAGTA 60.320 55.000 0.00 0.00 43.24 2.24
81 82 1.595382 GATATGCCGCTCCGCAAGT 60.595 57.895 0.00 0.00 43.24 3.16
82 83 2.661566 CGATATGCCGCTCCGCAAG 61.662 63.158 0.00 0.00 43.24 4.01
83 84 2.661537 CGATATGCCGCTCCGCAA 60.662 61.111 0.00 0.00 43.24 4.85
84 85 4.662961 CCGATATGCCGCTCCGCA 62.663 66.667 0.00 0.00 44.35 5.69
85 86 3.858868 TTCCGATATGCCGCTCCGC 62.859 63.158 0.00 0.00 0.00 5.54
86 87 0.878523 TTTTCCGATATGCCGCTCCG 60.879 55.000 0.00 0.00 0.00 4.63
87 88 1.264288 CTTTTTCCGATATGCCGCTCC 59.736 52.381 0.00 0.00 0.00 4.70
88 89 2.210116 TCTTTTTCCGATATGCCGCTC 58.790 47.619 0.00 0.00 0.00 5.03
89 90 2.325583 TCTTTTTCCGATATGCCGCT 57.674 45.000 0.00 0.00 0.00 5.52
90 91 2.287009 CCTTCTTTTTCCGATATGCCGC 60.287 50.000 0.00 0.00 0.00 6.53
91 92 3.202906 TCCTTCTTTTTCCGATATGCCG 58.797 45.455 0.00 0.00 0.00 5.69
92 93 5.299279 TCAATCCTTCTTTTTCCGATATGCC 59.701 40.000 0.00 0.00 0.00 4.40
93 94 6.038714 AGTCAATCCTTCTTTTTCCGATATGC 59.961 38.462 0.00 0.00 0.00 3.14
94 95 7.559590 AGTCAATCCTTCTTTTTCCGATATG 57.440 36.000 0.00 0.00 0.00 1.78
95 96 8.581253 AAAGTCAATCCTTCTTTTTCCGATAT 57.419 30.769 0.00 0.00 0.00 1.63
96 97 7.883311 AGAAAGTCAATCCTTCTTTTTCCGATA 59.117 33.333 0.00 0.00 32.59 2.92
97 98 6.717084 AGAAAGTCAATCCTTCTTTTTCCGAT 59.283 34.615 0.00 0.00 32.59 4.18
98 99 6.062095 AGAAAGTCAATCCTTCTTTTTCCGA 58.938 36.000 0.00 0.00 32.59 4.55
99 100 6.319141 AGAAAGTCAATCCTTCTTTTTCCG 57.681 37.500 0.00 0.00 32.59 4.30
101 102 9.974750 CGTATAGAAAGTCAATCCTTCTTTTTC 57.025 33.333 0.00 0.00 32.59 2.29
102 103 8.947115 CCGTATAGAAAGTCAATCCTTCTTTTT 58.053 33.333 0.00 0.00 32.59 1.94
103 104 7.553044 CCCGTATAGAAAGTCAATCCTTCTTTT 59.447 37.037 0.00 0.00 32.59 2.27
104 105 7.048512 CCCGTATAGAAAGTCAATCCTTCTTT 58.951 38.462 0.00 0.00 34.68 2.52
105 106 6.583562 CCCGTATAGAAAGTCAATCCTTCTT 58.416 40.000 0.00 0.00 0.00 2.52
106 107 5.453480 GCCCGTATAGAAAGTCAATCCTTCT 60.453 44.000 0.00 0.00 0.00 2.85
107 108 4.750598 GCCCGTATAGAAAGTCAATCCTTC 59.249 45.833 0.00 0.00 0.00 3.46
108 109 4.444449 GGCCCGTATAGAAAGTCAATCCTT 60.444 45.833 0.00 0.00 0.00 3.36
109 110 3.071167 GGCCCGTATAGAAAGTCAATCCT 59.929 47.826 0.00 0.00 0.00 3.24
110 111 3.071167 AGGCCCGTATAGAAAGTCAATCC 59.929 47.826 0.00 0.00 0.00 3.01
111 112 4.058817 CAGGCCCGTATAGAAAGTCAATC 58.941 47.826 0.00 0.00 0.00 2.67
112 113 3.454812 ACAGGCCCGTATAGAAAGTCAAT 59.545 43.478 0.00 0.00 0.00 2.57
113 114 2.835764 ACAGGCCCGTATAGAAAGTCAA 59.164 45.455 0.00 0.00 0.00 3.18
114 115 2.429610 GACAGGCCCGTATAGAAAGTCA 59.570 50.000 0.00 0.00 0.00 3.41
115 116 2.223994 GGACAGGCCCGTATAGAAAGTC 60.224 54.545 0.00 0.00 0.00 3.01
116 117 1.761198 GGACAGGCCCGTATAGAAAGT 59.239 52.381 0.00 0.00 0.00 2.66
117 118 2.528041 GGACAGGCCCGTATAGAAAG 57.472 55.000 0.00 0.00 0.00 2.62
128 129 2.376165 GGGTAAGAGGGGACAGGCC 61.376 68.421 0.00 0.00 0.00 5.19
129 130 2.376165 GGGGTAAGAGGGGACAGGC 61.376 68.421 0.00 0.00 0.00 4.85
130 131 0.640495 TAGGGGTAAGAGGGGACAGG 59.360 60.000 0.00 0.00 0.00 4.00
131 132 2.563039 TTAGGGGTAAGAGGGGACAG 57.437 55.000 0.00 0.00 0.00 3.51
132 133 3.519370 AATTAGGGGTAAGAGGGGACA 57.481 47.619 0.00 0.00 0.00 4.02
133 134 4.723285 TGTTAATTAGGGGTAAGAGGGGAC 59.277 45.833 0.00 0.00 0.00 4.46
134 135 4.975463 TGTTAATTAGGGGTAAGAGGGGA 58.025 43.478 0.00 0.00 0.00 4.81
135 136 5.720486 TTGTTAATTAGGGGTAAGAGGGG 57.280 43.478 0.00 0.00 0.00 4.79
136 137 9.297037 CATAATTGTTAATTAGGGGTAAGAGGG 57.703 37.037 0.00 0.00 36.83 4.30
137 138 8.793592 GCATAATTGTTAATTAGGGGTAAGAGG 58.206 37.037 7.72 0.00 36.83 3.69
138 139 9.574516 AGCATAATTGTTAATTAGGGGTAAGAG 57.425 33.333 7.72 0.00 36.83 2.85
139 140 9.349713 CAGCATAATTGTTAATTAGGGGTAAGA 57.650 33.333 7.72 0.00 36.83 2.10
140 141 8.082242 GCAGCATAATTGTTAATTAGGGGTAAG 58.918 37.037 7.72 0.00 36.83 2.34
141 142 7.561722 TGCAGCATAATTGTTAATTAGGGGTAA 59.438 33.333 0.00 0.00 36.83 2.85
142 143 7.063593 TGCAGCATAATTGTTAATTAGGGGTA 58.936 34.615 0.00 0.00 36.83 3.69
143 144 5.896678 TGCAGCATAATTGTTAATTAGGGGT 59.103 36.000 0.00 2.88 36.83 4.95
144 145 6.403866 TGCAGCATAATTGTTAATTAGGGG 57.596 37.500 0.00 0.00 36.83 4.79
145 146 6.701400 GGTTGCAGCATAATTGTTAATTAGGG 59.299 38.462 2.05 1.65 36.83 3.53
146 147 7.264221 TGGTTGCAGCATAATTGTTAATTAGG 58.736 34.615 2.05 0.00 36.83 2.69
147 148 8.700722 TTGGTTGCAGCATAATTGTTAATTAG 57.299 30.769 2.05 0.00 36.83 1.73
148 149 8.310382 ACTTGGTTGCAGCATAATTGTTAATTA 58.690 29.630 2.05 0.00 37.71 1.40
149 150 7.118101 CACTTGGTTGCAGCATAATTGTTAATT 59.882 33.333 2.05 0.00 34.90 1.40
150 151 6.591062 CACTTGGTTGCAGCATAATTGTTAAT 59.409 34.615 2.05 0.00 0.00 1.40
151 152 5.925397 CACTTGGTTGCAGCATAATTGTTAA 59.075 36.000 2.05 0.00 0.00 2.01
152 153 5.468592 CACTTGGTTGCAGCATAATTGTTA 58.531 37.500 2.05 0.00 0.00 2.41
153 154 4.309099 CACTTGGTTGCAGCATAATTGTT 58.691 39.130 2.05 0.00 0.00 2.83
154 155 3.306225 CCACTTGGTTGCAGCATAATTGT 60.306 43.478 2.05 0.00 0.00 2.71
155 156 3.255725 CCACTTGGTTGCAGCATAATTG 58.744 45.455 2.05 2.04 0.00 2.32
156 157 2.234414 CCCACTTGGTTGCAGCATAATT 59.766 45.455 2.05 0.00 0.00 1.40
157 158 1.826720 CCCACTTGGTTGCAGCATAAT 59.173 47.619 2.05 0.00 0.00 1.28
158 159 1.255882 CCCACTTGGTTGCAGCATAA 58.744 50.000 2.05 0.00 0.00 1.90
159 160 1.250154 GCCCACTTGGTTGCAGCATA 61.250 55.000 2.05 0.00 36.04 3.14
160 161 2.576832 GCCCACTTGGTTGCAGCAT 61.577 57.895 2.05 0.00 36.04 3.79
161 162 3.225798 GCCCACTTGGTTGCAGCA 61.226 61.111 2.05 0.00 36.04 4.41
162 163 3.216944 CTGCCCACTTGGTTGCAGC 62.217 63.158 11.99 0.00 41.30 5.25
163 164 3.045142 CTGCCCACTTGGTTGCAG 58.955 61.111 10.87 10.87 41.62 4.41
164 165 2.126596 CACTGCCCACTTGGTTGCA 61.127 57.895 0.00 0.00 36.04 4.08
165 166 2.730094 CACTGCCCACTTGGTTGC 59.270 61.111 0.00 0.00 36.04 4.17
166 167 0.179004 TACCACTGCCCACTTGGTTG 60.179 55.000 0.00 0.00 40.98 3.77
181 182 3.559171 CCCTCTGCTTACTTTGCTTACCA 60.559 47.826 0.00 0.00 0.00 3.25
184 185 4.041691 AGAACCCTCTGCTTACTTTGCTTA 59.958 41.667 0.00 0.00 0.00 3.09
210 211 1.566018 GAACCTTCGCACAACCGGAG 61.566 60.000 9.46 1.96 33.60 4.63
236 237 8.973182 AGAAGGTTACCAAAATCAGTAAAAACA 58.027 29.630 3.51 0.00 30.64 2.83
243 244 7.514721 TCTTGTAGAAGGTTACCAAAATCAGT 58.485 34.615 3.51 0.00 0.00 3.41
244 245 7.979444 TCTTGTAGAAGGTTACCAAAATCAG 57.021 36.000 3.51 0.00 0.00 2.90
279 280 4.965119 AAGCAACAACGAAGAGAAAACT 57.035 36.364 0.00 0.00 0.00 2.66
302 303 3.913509 AGACCGGGAAAAAGGGTAAAAA 58.086 40.909 6.32 0.00 33.28 1.94
306 307 2.442502 TGAAAGACCGGGAAAAAGGGTA 59.557 45.455 6.32 0.00 33.28 3.69
307 308 1.215924 TGAAAGACCGGGAAAAAGGGT 59.784 47.619 6.32 0.00 36.58 4.34
310 311 6.315144 ACAAAAATTGAAAGACCGGGAAAAAG 59.685 34.615 6.32 0.00 0.00 2.27
311 312 6.174049 ACAAAAATTGAAAGACCGGGAAAAA 58.826 32.000 6.32 0.00 0.00 1.94
312 313 5.735766 ACAAAAATTGAAAGACCGGGAAAA 58.264 33.333 6.32 0.00 0.00 2.29
318 319 9.261318 GAAAAAGAAACAAAAATTGAAAGACCG 57.739 29.630 0.00 0.00 0.00 4.79
534 539 8.002433 ACAAAATTACGAAAATCAAATCACCG 57.998 30.769 0.00 0.00 0.00 4.94
553 558 0.100503 GCAGCCGGCGAATACAAAAT 59.899 50.000 23.20 0.00 0.00 1.82
564 575 2.870372 CAAGTACTTGCAGCCGGC 59.130 61.111 21.89 21.89 45.13 6.13
605 616 6.324819 ACATGCGAATAGAATTCAGGTTTTG 58.675 36.000 8.44 1.16 0.00 2.44
611 622 7.468922 TTCACTACATGCGAATAGAATTCAG 57.531 36.000 8.44 0.00 0.00 3.02
650 661 2.684374 GTTTACTGGTTTGGTTGGACGT 59.316 45.455 0.00 0.00 0.00 4.34
715 726 1.165270 GGTTGGCTGTCTATGCGTTT 58.835 50.000 0.00 0.00 0.00 3.60
733 744 2.104451 CAGTCTGGATCCTGGATTGAGG 59.896 54.545 17.73 2.54 0.00 3.86
862 873 9.424319 TGATTGATTATATAACGGCTCTCTTTC 57.576 33.333 0.00 0.00 0.00 2.62
896 912 4.650972 TGTGCCATTATATAACCTCCCC 57.349 45.455 0.00 0.00 0.00 4.81
921 941 3.303135 TCCTCACGTTCTGCCGCT 61.303 61.111 0.00 0.00 0.00 5.52
947 967 4.398319 CCTCTATCTCTCTCCTTGACTCC 58.602 52.174 0.00 0.00 0.00 3.85
975 995 2.361119 AGCCGCGTATCTTGTGAATAGA 59.639 45.455 4.92 0.00 0.00 1.98
976 996 2.472861 CAGCCGCGTATCTTGTGAATAG 59.527 50.000 4.92 0.00 0.00 1.73
978 998 1.290203 CAGCCGCGTATCTTGTGAAT 58.710 50.000 4.92 0.00 0.00 2.57
979 999 1.358725 GCAGCCGCGTATCTTGTGAA 61.359 55.000 4.92 0.00 0.00 3.18
1042 1062 1.880340 GCATGAAGACGGCGAGGAG 60.880 63.158 16.62 0.00 0.00 3.69
1134 1154 2.234661 GGGAAAAGCAATTCAGAAGGGG 59.765 50.000 4.22 0.00 0.00 4.79
1161 1182 4.511826 ACGAGAAACAAGTGTGAGGAAATC 59.488 41.667 0.00 0.00 0.00 2.17
1170 1191 1.792949 GCATCGACGAGAAACAAGTGT 59.207 47.619 3.01 0.00 0.00 3.55
1198 1219 3.450115 CCCTGGTCGACCGAGGAC 61.450 72.222 35.49 15.07 36.83 3.85
1311 1332 0.814410 ATGAGAAGCCTCTGCGCATG 60.814 55.000 12.24 7.11 44.33 4.06
1341 1362 3.512680 GATCGACGGACAACAGAAAGAT 58.487 45.455 0.00 0.00 0.00 2.40
1354 1375 2.412977 CCACTAGCTTATCGATCGACGG 60.413 54.545 22.06 14.01 42.82 4.79
1358 1379 5.303747 AGAATCCACTAGCTTATCGATCG 57.696 43.478 9.36 9.36 0.00 3.69
1431 1452 1.204704 TGCGAATCCACCAGAGTACAG 59.795 52.381 0.00 0.00 0.00 2.74
1560 1594 8.798402 ACCACGACATTTATTTTGGATTAAAGA 58.202 29.630 0.00 0.00 0.00 2.52
1563 1597 9.765795 AAAACCACGACATTTATTTTGGATTAA 57.234 25.926 0.00 0.00 0.00 1.40
1577 1611 7.484975 TCATTTTTGAACTAAAACCACGACAT 58.515 30.769 0.00 0.00 37.96 3.06
1766 1820 5.340360 CCCAATAGAAAGAATGGAGTTCCCT 60.340 44.000 0.00 0.00 37.56 4.20
1772 1826 8.986929 ATTAGAACCCAATAGAAAGAATGGAG 57.013 34.615 0.00 0.00 34.82 3.86
1806 1861 7.129109 TCGTCATTCTTCCAATTCACTTAAC 57.871 36.000 0.00 0.00 0.00 2.01
1851 1906 4.258702 TCTAGAGTTGTCAAGAGCCAAC 57.741 45.455 0.00 0.00 40.94 3.77
1862 1917 8.827677 GGCATATTTTTCGTATTCTAGAGTTGT 58.172 33.333 0.00 0.00 0.00 3.32
1864 1919 7.444487 GGGGCATATTTTTCGTATTCTAGAGTT 59.556 37.037 0.00 0.00 0.00 3.01
1871 1926 4.823790 ACGGGGCATATTTTTCGTATTC 57.176 40.909 0.00 0.00 0.00 1.75
1901 1956 9.611284 TTTTCTACATTGACTCATTCGAAAATG 57.389 29.630 13.72 13.72 43.10 2.32
1934 1993 6.478512 AGGTGCTAATTTTGTTCCAAAAGA 57.521 33.333 8.00 0.00 0.00 2.52
2048 2107 9.757227 GCACTAACTCATCTATTTACATTCTCT 57.243 33.333 0.00 0.00 0.00 3.10
2049 2108 9.534565 TGCACTAACTCATCTATTTACATTCTC 57.465 33.333 0.00 0.00 0.00 2.87
2050 2109 9.539825 CTGCACTAACTCATCTATTTACATTCT 57.460 33.333 0.00 0.00 0.00 2.40
2051 2110 9.319143 ACTGCACTAACTCATCTATTTACATTC 57.681 33.333 0.00 0.00 0.00 2.67
2052 2111 9.672673 AACTGCACTAACTCATCTATTTACATT 57.327 29.630 0.00 0.00 0.00 2.71
2058 2117 9.726438 AGTTTTAACTGCACTAACTCATCTATT 57.274 29.630 0.00 0.00 37.98 1.73
2059 2118 9.726438 AAGTTTTAACTGCACTAACTCATCTAT 57.274 29.630 0.00 0.00 39.66 1.98
2060 2119 9.555727 AAAGTTTTAACTGCACTAACTCATCTA 57.444 29.630 0.00 0.00 39.66 1.98
2061 2120 8.451908 AAAGTTTTAACTGCACTAACTCATCT 57.548 30.769 0.00 0.00 39.66 2.90
2062 2121 9.170584 GAAAAGTTTTAACTGCACTAACTCATC 57.829 33.333 0.00 0.00 39.66 2.92
2063 2122 8.682710 TGAAAAGTTTTAACTGCACTAACTCAT 58.317 29.630 0.00 0.00 39.66 2.90
2064 2123 8.046294 TGAAAAGTTTTAACTGCACTAACTCA 57.954 30.769 0.00 0.00 39.66 3.41
2065 2124 8.905103 TTGAAAAGTTTTAACTGCACTAACTC 57.095 30.769 0.00 0.00 39.66 3.01
2066 2125 9.135843 GTTTGAAAAGTTTTAACTGCACTAACT 57.864 29.630 0.00 0.00 39.66 2.24
2067 2126 9.135843 AGTTTGAAAAGTTTTAACTGCACTAAC 57.864 29.630 13.33 7.53 39.66 2.34
2068 2127 9.699703 AAGTTTGAAAAGTTTTAACTGCACTAA 57.300 25.926 14.37 0.00 39.66 2.24
2069 2128 9.699703 AAAGTTTGAAAAGTTTTAACTGCACTA 57.300 25.926 14.37 0.00 38.10 2.74
2070 2129 8.495148 CAAAGTTTGAAAAGTTTTAACTGCACT 58.505 29.630 10.19 4.18 38.98 4.40
2071 2130 8.491950 TCAAAGTTTGAAAAGTTTTAACTGCAC 58.508 29.630 15.92 2.37 38.98 4.57
2072 2131 8.491950 GTCAAAGTTTGAAAAGTTTTAACTGCA 58.508 29.630 19.63 1.02 42.15 4.41
2073 2132 8.491950 TGTCAAAGTTTGAAAAGTTTTAACTGC 58.508 29.630 19.63 3.40 42.15 4.40
2075 2134 9.758651 ACTGTCAAAGTTTGAAAAGTTTTAACT 57.241 25.926 19.63 9.69 42.15 2.24
2081 2140 9.227777 ACTAGTACTGTCAAAGTTTGAAAAGTT 57.772 29.630 27.42 18.50 42.15 2.66
2082 2141 8.788325 ACTAGTACTGTCAAAGTTTGAAAAGT 57.212 30.769 26.31 26.31 42.15 2.66
2083 2142 9.490663 CAACTAGTACTGTCAAAGTTTGAAAAG 57.509 33.333 19.63 20.08 42.15 2.27
2084 2143 9.221933 TCAACTAGTACTGTCAAAGTTTGAAAA 57.778 29.630 19.63 10.41 42.15 2.29
2085 2144 8.780846 TCAACTAGTACTGTCAAAGTTTGAAA 57.219 30.769 19.63 13.83 42.15 2.69
2086 2145 8.958119 ATCAACTAGTACTGTCAAAGTTTGAA 57.042 30.769 19.63 9.50 42.15 2.69
2168 2227 0.572590 CGACAGAATTAGCGAAGGCG 59.427 55.000 0.00 0.00 46.35 5.52
2169 2228 1.588861 GTCGACAGAATTAGCGAAGGC 59.411 52.381 11.55 0.00 40.37 4.35
2170 2229 1.846782 CGTCGACAGAATTAGCGAAGG 59.153 52.381 17.16 0.00 34.29 3.46
2171 2230 2.782163 TCGTCGACAGAATTAGCGAAG 58.218 47.619 17.16 0.00 34.29 3.79
2172 2231 2.905959 TCGTCGACAGAATTAGCGAA 57.094 45.000 17.16 0.00 34.29 4.70
2173 2232 2.512885 GTTCGTCGACAGAATTAGCGA 58.487 47.619 17.16 0.12 0.00 4.93
2174 2233 1.582502 GGTTCGTCGACAGAATTAGCG 59.417 52.381 17.16 0.00 0.00 4.26
2175 2234 2.602878 TGGTTCGTCGACAGAATTAGC 58.397 47.619 17.16 9.04 0.00 3.09
2176 2235 3.000322 GCATGGTTCGTCGACAGAATTAG 60.000 47.826 17.16 11.52 0.00 1.73
2177 2236 2.927477 GCATGGTTCGTCGACAGAATTA 59.073 45.455 17.16 12.29 0.00 1.40
2178 2237 1.732259 GCATGGTTCGTCGACAGAATT 59.268 47.619 17.16 6.82 0.00 2.17
2179 2238 1.066858 AGCATGGTTCGTCGACAGAAT 60.067 47.619 17.16 3.09 0.00 2.40
2180 2239 0.317160 AGCATGGTTCGTCGACAGAA 59.683 50.000 17.16 16.19 0.00 3.02
2181 2240 0.388520 CAGCATGGTTCGTCGACAGA 60.389 55.000 17.16 10.99 0.00 3.41
2182 2241 2.073307 CAGCATGGTTCGTCGACAG 58.927 57.895 17.16 8.67 0.00 3.51
2183 2242 4.260194 CAGCATGGTTCGTCGACA 57.740 55.556 17.16 0.00 0.00 4.35
2194 2253 7.750229 ATATTTACCATTAGTGTCCAGCATG 57.250 36.000 0.00 0.00 0.00 4.06
2195 2254 9.860650 TTAATATTTACCATTAGTGTCCAGCAT 57.139 29.630 0.00 0.00 0.00 3.79
2196 2255 9.688091 TTTAATATTTACCATTAGTGTCCAGCA 57.312 29.630 0.00 0.00 0.00 4.41
2217 2276 9.985730 ATTCACATTGACACATGAGTTTTTAAT 57.014 25.926 0.00 0.00 0.00 1.40
2218 2277 9.814899 AATTCACATTGACACATGAGTTTTTAA 57.185 25.926 0.00 0.00 0.00 1.52
2219 2278 9.247126 CAATTCACATTGACACATGAGTTTTTA 57.753 29.630 0.00 0.00 42.35 1.52
2220 2279 7.980662 TCAATTCACATTGACACATGAGTTTTT 59.019 29.630 0.00 0.00 43.32 1.94
2221 2280 7.490840 TCAATTCACATTGACACATGAGTTTT 58.509 30.769 0.00 0.00 43.32 2.43
2222 2281 7.041635 TCAATTCACATTGACACATGAGTTT 57.958 32.000 0.00 0.00 43.32 2.66
2223 2282 6.638096 TCAATTCACATTGACACATGAGTT 57.362 33.333 0.00 0.00 43.32 3.01
2233 2292 7.443477 ACATCACCATTTTCAATTCACATTGA 58.557 30.769 0.00 0.00 45.96 2.57
2234 2293 7.661127 ACATCACCATTTTCAATTCACATTG 57.339 32.000 0.00 0.00 41.25 2.82
2235 2294 7.932491 TCAACATCACCATTTTCAATTCACATT 59.068 29.630 0.00 0.00 0.00 2.71
2236 2295 7.443477 TCAACATCACCATTTTCAATTCACAT 58.557 30.769 0.00 0.00 0.00 3.21
2237 2296 6.814043 TCAACATCACCATTTTCAATTCACA 58.186 32.000 0.00 0.00 0.00 3.58
2238 2297 7.712264 TTCAACATCACCATTTTCAATTCAC 57.288 32.000 0.00 0.00 0.00 3.18
2239 2298 8.905660 AATTCAACATCACCATTTTCAATTCA 57.094 26.923 0.00 0.00 0.00 2.57
2240 2299 9.601971 CAAATTCAACATCACCATTTTCAATTC 57.398 29.630 0.00 0.00 0.00 2.17
2241 2300 8.077386 GCAAATTCAACATCACCATTTTCAATT 58.923 29.630 0.00 0.00 0.00 2.32
2242 2301 7.228906 TGCAAATTCAACATCACCATTTTCAAT 59.771 29.630 0.00 0.00 0.00 2.57
2243 2302 6.541278 TGCAAATTCAACATCACCATTTTCAA 59.459 30.769 0.00 0.00 0.00 2.69
2244 2303 6.018098 GTGCAAATTCAACATCACCATTTTCA 60.018 34.615 0.00 0.00 0.00 2.69
2245 2304 6.365050 GTGCAAATTCAACATCACCATTTTC 58.635 36.000 0.00 0.00 0.00 2.29
2246 2305 5.050227 CGTGCAAATTCAACATCACCATTTT 60.050 36.000 0.00 0.00 0.00 1.82
2247 2306 4.448395 CGTGCAAATTCAACATCACCATTT 59.552 37.500 0.00 0.00 0.00 2.32
2248 2307 3.989167 CGTGCAAATTCAACATCACCATT 59.011 39.130 0.00 0.00 0.00 3.16
2249 2308 3.577667 CGTGCAAATTCAACATCACCAT 58.422 40.909 0.00 0.00 0.00 3.55
2250 2309 2.861750 GCGTGCAAATTCAACATCACCA 60.862 45.455 0.00 0.00 0.00 4.17
2251 2310 1.720852 GCGTGCAAATTCAACATCACC 59.279 47.619 0.00 0.00 0.00 4.02
2252 2311 2.664916 AGCGTGCAAATTCAACATCAC 58.335 42.857 0.00 0.00 0.00 3.06
2253 2312 3.051327 CAAGCGTGCAAATTCAACATCA 58.949 40.909 0.00 0.00 0.00 3.07
2254 2313 2.409378 CCAAGCGTGCAAATTCAACATC 59.591 45.455 0.00 0.00 0.00 3.06
2255 2314 2.224018 ACCAAGCGTGCAAATTCAACAT 60.224 40.909 0.00 0.00 0.00 2.71
2256 2315 1.135915 ACCAAGCGTGCAAATTCAACA 59.864 42.857 0.00 0.00 0.00 3.33
2257 2316 1.851658 ACCAAGCGTGCAAATTCAAC 58.148 45.000 0.00 0.00 0.00 3.18
2258 2317 2.359214 TGTACCAAGCGTGCAAATTCAA 59.641 40.909 0.00 0.00 33.73 2.69
2259 2318 1.950216 TGTACCAAGCGTGCAAATTCA 59.050 42.857 0.00 0.00 33.73 2.57
2260 2319 2.697431 TGTACCAAGCGTGCAAATTC 57.303 45.000 0.00 0.00 33.73 2.17
2265 2324 1.598882 TTGATTGTACCAAGCGTGCA 58.401 45.000 0.00 0.00 35.00 4.57
2266 2325 2.697431 TTTGATTGTACCAAGCGTGC 57.303 45.000 0.00 0.00 0.00 5.34
2267 2326 5.545658 AGTATTTGATTGTACCAAGCGTG 57.454 39.130 0.00 0.00 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.