Multiple sequence alignment - TraesCS1A01G112500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G112500 chr1A 100.000 3645 0 0 1 3645 114543744 114547388 0.000000e+00 6732
1 TraesCS1A01G112500 chr1A 89.668 271 28 0 3148 3418 38360987 38361257 2.690000e-91 346
2 TraesCS1A01G112500 chr1D 89.537 2915 168 56 1 2857 110333658 110336493 0.000000e+00 3567
3 TraesCS1A01G112500 chr1D 87.662 154 8 7 3411 3559 110336650 110336797 6.260000e-38 169
4 TraesCS1A01G112500 chr1B 90.754 2574 143 34 572 3079 167712241 167714785 0.000000e+00 3347
5 TraesCS1A01G112500 chr1B 87.712 236 17 6 3415 3644 167714782 167715011 7.760000e-67 265
6 TraesCS1A01G112500 chr4A 86.628 516 67 2 1787 2301 497011898 497012412 1.470000e-158 569
7 TraesCS1A01G112500 chr4B 86.434 516 68 2 1787 2301 119275144 119275658 6.830000e-157 564
8 TraesCS1A01G112500 chr4D 86.047 516 70 2 1787 2301 84278112 84278626 1.480000e-153 553
9 TraesCS1A01G112500 chr4D 88.298 282 31 2 3150 3430 499680011 499679731 1.620000e-88 337
10 TraesCS1A01G112500 chr4D 97.143 70 2 0 3078 3147 506269546 506269477 6.390000e-23 119
11 TraesCS1A01G112500 chr6A 94.118 272 15 1 3148 3418 1125646 1125917 2.620000e-111 412
12 TraesCS1A01G112500 chr6A 89.668 271 28 0 3148 3418 504896302 504896572 2.690000e-91 346
13 TraesCS1A01G112500 chr6A 89.247 279 26 4 3148 3423 521472908 521473185 2.690000e-91 346
14 TraesCS1A01G112500 chr3D 90.775 271 24 1 3148 3418 434949738 434949469 9.620000e-96 361
15 TraesCS1A01G112500 chr3D 94.667 75 4 0 3078 3152 573206018 573205944 2.300000e-22 117
16 TraesCS1A01G112500 chr3D 97.059 68 2 0 3078 3145 26009694 26009627 8.270000e-22 115
17 TraesCS1A01G112500 chr7A 89.781 274 25 2 3148 3418 68722053 68722326 7.490000e-92 348
18 TraesCS1A01G112500 chr7A 95.775 71 3 0 3077 3147 57204622 57204552 8.270000e-22 115
19 TraesCS1A01G112500 chr6B 89.377 273 29 0 3148 3420 324256314 324256586 9.690000e-91 344
20 TraesCS1A01G112500 chr3A 88.929 280 27 3 3148 3426 707834216 707833940 3.490000e-90 342
21 TraesCS1A01G112500 chr2A 92.941 85 5 1 3069 3152 12716555 12716471 4.940000e-24 122
22 TraesCS1A01G112500 chr2A 95.775 71 3 0 3077 3147 663633308 663633238 8.270000e-22 115
23 TraesCS1A01G112500 chr2A 94.521 73 4 0 3075 3147 391106238 391106310 2.970000e-21 113
24 TraesCS1A01G112500 chr7D 96.000 75 2 1 3073 3147 239629085 239629012 1.780000e-23 121
25 TraesCS1A01G112500 chr2D 97.143 70 2 0 3078 3147 13622964 13623033 6.390000e-23 119


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G112500 chr1A 114543744 114547388 3644 False 6732 6732 100.0000 1 3645 1 chr1A.!!$F2 3644
1 TraesCS1A01G112500 chr1D 110333658 110336797 3139 False 1868 3567 88.5995 1 3559 2 chr1D.!!$F1 3558
2 TraesCS1A01G112500 chr1B 167712241 167715011 2770 False 1806 3347 89.2330 572 3644 2 chr1B.!!$F1 3072
3 TraesCS1A01G112500 chr4A 497011898 497012412 514 False 569 569 86.6280 1787 2301 1 chr4A.!!$F1 514
4 TraesCS1A01G112500 chr4B 119275144 119275658 514 False 564 564 86.4340 1787 2301 1 chr4B.!!$F1 514
5 TraesCS1A01G112500 chr4D 84278112 84278626 514 False 553 553 86.0470 1787 2301 1 chr4D.!!$F1 514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
206 208 0.167470 CAACCACGCTTCATGCTCTG 59.833 55.0 0.0 0.0 40.11 3.35 F
1244 1267 0.108186 CATGCCCGTAGCTGTTCTCA 60.108 55.0 0.0 0.0 44.23 3.27 F
1291 1315 0.613260 AGTTCAAGCTGCGGGTCATA 59.387 50.0 0.0 0.0 0.00 2.15 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1275 1298 0.175760 GAGTATGACCCGCAGCTTGA 59.824 55.0 0.0 0.0 0.00 3.02 R
2562 2630 0.109272 CAGCTGCAAAGCCAGACATG 60.109 55.0 0.0 0.0 34.77 3.21 R
3082 3161 0.244994 CACTCTTCACCAGACGGAGG 59.755 60.0 0.0 0.0 35.59 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 2.290323 GCTAGTGGAGAAAGGAAGGCAA 60.290 50.000 0.00 0.00 0.00 4.52
58 59 1.762460 CACCTAGGGGCTCGACCAT 60.762 63.158 14.81 0.00 42.05 3.55
110 111 4.223800 GGCACTGGCGATGATGAA 57.776 55.556 0.00 0.00 42.47 2.57
116 117 3.059325 GCACTGGCGATGATGAAATACTC 60.059 47.826 0.00 0.00 0.00 2.59
118 119 5.532557 CACTGGCGATGATGAAATACTCTA 58.467 41.667 0.00 0.00 0.00 2.43
153 154 3.005684 TGTTGCCACAACAATCTTCATCC 59.994 43.478 10.54 0.00 0.00 3.51
160 161 3.334881 ACAACAATCTTCATCCCCTCCTT 59.665 43.478 0.00 0.00 0.00 3.36
206 208 0.167470 CAACCACGCTTCATGCTCTG 59.833 55.000 0.00 0.00 40.11 3.35
261 263 4.467084 GATTCGGAGCCGCCACCA 62.467 66.667 3.59 0.00 39.59 4.17
282 284 1.834996 GCCATGCCCATGAGAGAGA 59.165 57.895 9.73 0.00 41.20 3.10
283 285 0.250381 GCCATGCCCATGAGAGAGAG 60.250 60.000 9.73 0.00 41.20 3.20
284 286 1.421480 CCATGCCCATGAGAGAGAGA 58.579 55.000 9.73 0.00 41.20 3.10
285 287 1.345089 CCATGCCCATGAGAGAGAGAG 59.655 57.143 9.73 0.00 41.20 3.20
286 288 2.317973 CATGCCCATGAGAGAGAGAGA 58.682 52.381 2.09 0.00 41.20 3.10
287 289 2.070305 TGCCCATGAGAGAGAGAGAG 57.930 55.000 0.00 0.00 0.00 3.20
288 290 1.568123 TGCCCATGAGAGAGAGAGAGA 59.432 52.381 0.00 0.00 0.00 3.10
289 291 2.233271 GCCCATGAGAGAGAGAGAGAG 58.767 57.143 0.00 0.00 0.00 3.20
290 292 2.158623 GCCCATGAGAGAGAGAGAGAGA 60.159 54.545 0.00 0.00 0.00 3.10
291 293 3.748083 CCCATGAGAGAGAGAGAGAGAG 58.252 54.545 0.00 0.00 0.00 3.20
292 294 3.392285 CCCATGAGAGAGAGAGAGAGAGA 59.608 52.174 0.00 0.00 0.00 3.10
293 295 4.504514 CCCATGAGAGAGAGAGAGAGAGAG 60.505 54.167 0.00 0.00 0.00 3.20
294 296 4.346127 CCATGAGAGAGAGAGAGAGAGAGA 59.654 50.000 0.00 0.00 0.00 3.10
295 297 5.511031 CCATGAGAGAGAGAGAGAGAGAGAG 60.511 52.000 0.00 0.00 0.00 3.20
296 298 4.871822 TGAGAGAGAGAGAGAGAGAGAGA 58.128 47.826 0.00 0.00 0.00 3.10
297 299 4.892345 TGAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
298 300 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
299 301 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
300 302 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
301 303 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
302 304 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
303 305 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
304 306 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
305 307 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
320 322 1.222567 GAGAGGAGAGGGAGAGGAGT 58.777 60.000 0.00 0.00 0.00 3.85
325 327 2.930405 AGGAGAGGGAGAGGAGTAACTT 59.070 50.000 0.00 0.00 0.00 2.66
346 348 0.973496 AGGGAGAGAAAGCGAGGGAC 60.973 60.000 0.00 0.00 0.00 4.46
348 350 1.139947 GAGAGAAAGCGAGGGACGG 59.860 63.158 0.00 0.00 42.83 4.79
364 366 3.462678 GGGAGTGACGGAGGGAGC 61.463 72.222 0.00 0.00 0.00 4.70
402 404 1.974343 AGTCGCTTCGGACAGAGCT 60.974 57.895 0.00 0.00 39.42 4.09
403 405 1.803519 GTCGCTTCGGACAGAGCTG 60.804 63.158 0.00 0.00 36.91 4.24
408 410 2.622436 GCTTCGGACAGAGCTGTTAAT 58.378 47.619 4.42 0.00 45.05 1.40
444 446 4.426971 TCGAACCACGAGGGATCA 57.573 55.556 3.29 0.00 46.45 2.92
445 447 2.661054 TCGAACCACGAGGGATCAA 58.339 52.632 3.29 0.00 46.45 2.57
449 451 0.991920 AACCACGAGGGATCAACCAT 59.008 50.000 3.29 0.00 41.15 3.55
457 459 3.696051 CGAGGGATCAACCATGTCAAAAT 59.304 43.478 0.00 0.00 41.20 1.82
458 460 4.439153 CGAGGGATCAACCATGTCAAAATG 60.439 45.833 0.00 0.00 41.20 2.32
463 465 5.105797 GGATCAACCATGTCAAAATGTGCTA 60.106 40.000 0.00 0.00 38.79 3.49
468 470 7.224362 TCAACCATGTCAAAATGTGCTAAAAAG 59.776 33.333 0.00 0.00 0.00 2.27
486 491 6.421377 AAAAAGGCTCAATGTTTTTGTCAC 57.579 33.333 0.00 0.00 33.26 3.67
487 492 3.733443 AGGCTCAATGTTTTTGTCACC 57.267 42.857 0.00 0.00 0.00 4.02
521 526 1.300481 TCGGTGCGAAATGTCACAAA 58.700 45.000 0.00 0.00 35.04 2.83
541 546 7.730364 ACAAATCGTGAAGTGATAGTTTTCT 57.270 32.000 0.00 0.00 0.00 2.52
556 561 7.823799 TGATAGTTTTCTGCTAATCATGACACA 59.176 33.333 0.00 0.00 0.00 3.72
558 563 7.275888 AGTTTTCTGCTAATCATGACACAAA 57.724 32.000 0.00 0.00 0.00 2.83
593 598 2.379005 GCCTAAACCATTTCCTCCTGG 58.621 52.381 0.00 0.00 38.55 4.45
669 677 4.065088 CCAAGTCCAATATATGACACGGG 58.935 47.826 6.10 0.00 0.00 5.28
673 681 6.488769 AGTCCAATATATGACACGGGTTAA 57.511 37.500 0.00 0.00 0.00 2.01
681 689 2.366533 TGACACGGGTTAAAGCAAACA 58.633 42.857 0.00 0.00 0.00 2.83
789 802 3.529319 ACTAATTTCTCCTCAGGCCCAAT 59.471 43.478 0.00 0.00 0.00 3.16
919 938 0.892755 TCTATATAAGCGGCCCCGTG 59.107 55.000 8.66 0.00 42.09 4.94
1175 1198 2.613474 GCGGAACCTGTGGTATGTGTTA 60.613 50.000 0.00 0.00 33.12 2.41
1205 1228 7.119262 CCGATGTTTATTTAGTTTCTGTCTGGT 59.881 37.037 0.00 0.00 0.00 4.00
1206 1229 7.957484 CGATGTTTATTTAGTTTCTGTCTGGTG 59.043 37.037 0.00 0.00 0.00 4.17
1214 1237 1.909700 TTCTGTCTGGTGGATTTGGC 58.090 50.000 0.00 0.00 0.00 4.52
1216 1239 1.144708 TCTGTCTGGTGGATTTGGCAA 59.855 47.619 0.00 0.00 0.00 4.52
1217 1240 1.542915 CTGTCTGGTGGATTTGGCAAG 59.457 52.381 0.00 0.00 0.00 4.01
1219 1242 2.225091 TGTCTGGTGGATTTGGCAAGAT 60.225 45.455 0.00 0.00 0.00 2.40
1244 1267 0.108186 CATGCCCGTAGCTGTTCTCA 60.108 55.000 0.00 0.00 44.23 3.27
1260 1283 4.213270 TGTTCTCATGTGGTGATTCGAAAC 59.787 41.667 0.00 0.00 35.97 2.78
1275 1298 7.855904 GTGATTCGAAACAACATTTGAGTAGTT 59.144 33.333 9.90 0.00 0.00 2.24
1291 1315 0.613260 AGTTCAAGCTGCGGGTCATA 59.387 50.000 0.00 0.00 0.00 2.15
1305 1329 3.613193 CGGGTCATACTCTGTTCGTTTCA 60.613 47.826 0.00 0.00 0.00 2.69
1309 1333 6.072673 GGGTCATACTCTGTTCGTTTCATTTT 60.073 38.462 0.00 0.00 0.00 1.82
1312 1336 8.709646 GTCATACTCTGTTCGTTTCATTTTAGT 58.290 33.333 0.00 0.00 0.00 2.24
1324 1348 8.666573 TCGTTTCATTTTAGTGTCTGTTTGTTA 58.333 29.630 0.00 0.00 0.00 2.41
1351 1375 2.019156 GCCCGAAAAATGCTCTAGGCT 61.019 52.381 0.00 0.00 42.39 4.58
1356 1380 3.000724 CGAAAAATGCTCTAGGCTTCTCG 59.999 47.826 0.00 5.07 42.39 4.04
1363 1387 2.801342 GCTCTAGGCTTCTCGGATGTTG 60.801 54.545 0.00 0.00 38.06 3.33
1388 1412 5.886960 ATTTCCTGTGCTCTTTCATGTAC 57.113 39.130 0.00 0.00 0.00 2.90
1407 1434 8.874156 TCATGTACTATGCTAGGAAATGAAGAT 58.126 33.333 6.04 0.00 0.00 2.40
1408 1435 9.149225 CATGTACTATGCTAGGAAATGAAGATC 57.851 37.037 0.00 0.00 0.00 2.75
1424 1451 5.494724 TGAAGATCTGTATGCTCTTGCTTT 58.505 37.500 0.00 0.00 40.48 3.51
1425 1452 5.942236 TGAAGATCTGTATGCTCTTGCTTTT 59.058 36.000 0.00 0.00 40.48 2.27
1456 1492 1.871772 GCACTGCTGCTGTTGGTAG 59.128 57.895 9.60 0.00 40.63 3.18
1467 1503 2.365582 CTGTTGGTAGGGTTGTATGGC 58.634 52.381 0.00 0.00 0.00 4.40
1476 1512 4.747265 AGGGTTGTATGGCCAATGATAT 57.253 40.909 10.96 0.00 0.00 1.63
1485 1521 8.797350 TGTATGGCCAATGATATTCTATGAAG 57.203 34.615 10.96 0.00 0.00 3.02
1486 1522 6.770746 ATGGCCAATGATATTCTATGAAGC 57.229 37.500 10.96 0.00 0.00 3.86
1501 1537 7.175347 TCTATGAAGCTGAATGAGTAGTTGT 57.825 36.000 0.00 0.00 0.00 3.32
1507 1543 3.365364 GCTGAATGAGTAGTTGTTGTGGC 60.365 47.826 0.00 0.00 0.00 5.01
1510 1546 5.237815 TGAATGAGTAGTTGTTGTGGCTAG 58.762 41.667 0.00 0.00 0.00 3.42
1511 1547 4.891992 ATGAGTAGTTGTTGTGGCTAGT 57.108 40.909 0.00 0.00 0.00 2.57
1512 1548 4.682778 TGAGTAGTTGTTGTGGCTAGTT 57.317 40.909 0.00 0.00 0.00 2.24
1513 1549 4.377021 TGAGTAGTTGTTGTGGCTAGTTG 58.623 43.478 0.00 0.00 0.00 3.16
1514 1550 4.141801 TGAGTAGTTGTTGTGGCTAGTTGT 60.142 41.667 0.00 0.00 0.00 3.32
1515 1551 4.777463 AGTAGTTGTTGTGGCTAGTTGTT 58.223 39.130 0.00 0.00 0.00 2.83
1516 1552 4.574828 AGTAGTTGTTGTGGCTAGTTGTTG 59.425 41.667 0.00 0.00 0.00 3.33
1519 1555 4.275936 AGTTGTTGTGGCTAGTTGTTGATC 59.724 41.667 0.00 0.00 0.00 2.92
1520 1556 3.814625 TGTTGTGGCTAGTTGTTGATCA 58.185 40.909 0.00 0.00 0.00 2.92
1521 1557 4.203226 TGTTGTGGCTAGTTGTTGATCAA 58.797 39.130 3.38 3.38 0.00 2.57
1538 1597 1.610038 TCAACTTGCCAACTGCTCATG 59.390 47.619 0.00 0.00 42.00 3.07
1539 1598 1.338973 CAACTTGCCAACTGCTCATGT 59.661 47.619 0.00 0.00 42.00 3.21
1590 1649 5.367945 TTCCCTGTCAATGGTAACCTATC 57.632 43.478 0.00 0.00 0.00 2.08
1629 1688 8.641541 TGATTGTACATGTTGCTCATATCTAGA 58.358 33.333 2.30 0.00 34.67 2.43
1652 1711 6.701400 AGAGTTGAATGTGGTGCAAATTAAAC 59.299 34.615 0.00 0.00 34.29 2.01
1655 1714 5.911752 TGAATGTGGTGCAAATTAAACTGT 58.088 33.333 0.00 0.00 0.00 3.55
1665 1724 7.653311 GGTGCAAATTAAACTGTTTCATTCTCT 59.347 33.333 9.38 0.00 0.00 3.10
1676 1735 5.935945 TGTTTCATTCTCTGTACCTGGAAA 58.064 37.500 0.00 0.00 0.00 3.13
1679 1738 6.433847 TTCATTCTCTGTACCTGGAAAGAA 57.566 37.500 0.00 2.37 0.00 2.52
1683 1742 3.259374 TCTCTGTACCTGGAAAGAAGCAG 59.741 47.826 0.00 0.00 0.00 4.24
1689 1748 2.173569 ACCTGGAAAGAAGCAGTGTCTT 59.826 45.455 0.00 0.00 36.90 3.01
1711 1770 7.166473 GTCTTAACTGAGTTGCACATTCTTTTG 59.834 37.037 8.33 0.00 0.00 2.44
1729 1788 8.939201 TTCTTTTGAATGTTCACTGCAAATTA 57.061 26.923 0.00 0.00 36.83 1.40
1730 1789 8.939201 TCTTTTGAATGTTCACTGCAAATTAA 57.061 26.923 0.00 0.00 36.83 1.40
1731 1790 9.376075 TCTTTTGAATGTTCACTGCAAATTAAA 57.624 25.926 0.00 0.00 36.83 1.52
1734 1793 9.932699 TTTGAATGTTCACTGCAAATTAAAATG 57.067 25.926 0.00 0.00 36.83 2.32
1766 1825 5.556947 GCATGTTTGCTGCTTTTAGTTGTTC 60.557 40.000 0.00 0.00 45.77 3.18
1893 1954 6.667414 ACCCTAAGATCAGGATCTATGATGTC 59.333 42.308 11.93 6.41 46.75 3.06
2016 2077 3.213506 TGCTTGCAACAAGTACATGACT 58.786 40.909 4.87 0.00 41.56 3.41
2142 2203 1.282157 ACTGGTATGAGGGGTGCTTTC 59.718 52.381 0.00 0.00 0.00 2.62
2318 2379 5.239525 AGTGGTAAGCACTGAAGATTGTTTC 59.760 40.000 0.00 0.00 0.00 2.78
2342 2408 6.704937 TCATGTGCTGAGATGATATTCTTGTC 59.295 38.462 0.00 0.00 27.06 3.18
2343 2409 5.981174 TGTGCTGAGATGATATTCTTGTCA 58.019 37.500 0.00 0.00 0.00 3.58
2369 2436 8.757982 AAATTTCTGTGTGCCATATCTCTAAT 57.242 30.769 0.00 0.00 0.00 1.73
2378 2445 6.183360 TGTGCCATATCTCTAATTTTGTGCTG 60.183 38.462 0.00 0.00 0.00 4.41
2380 2447 5.766222 CCATATCTCTAATTTTGTGCTGCC 58.234 41.667 0.00 0.00 0.00 4.85
2474 2541 3.130516 TGATGGAGTCAACGCTAAGGTAG 59.869 47.826 0.00 0.00 32.78 3.18
2486 2553 8.512956 TCAACGCTAAGGTAGATATACTTGATC 58.487 37.037 0.00 0.00 0.00 2.92
2503 2570 3.237746 TGATCCTGGGCAATTGTTTTGA 58.762 40.909 7.40 0.00 0.00 2.69
2510 2577 5.287674 TGGGCAATTGTTTTGAAGATGAA 57.712 34.783 7.40 0.00 0.00 2.57
2514 2581 6.928492 GGGCAATTGTTTTGAAGATGAACTTA 59.072 34.615 7.40 0.00 39.13 2.24
2528 2595 7.814264 AGATGAACTTATTTATCCTGCCTTG 57.186 36.000 0.00 0.00 32.47 3.61
2535 2602 7.410991 ACTTATTTATCCTGCCTTGGTAAACT 58.589 34.615 0.00 0.00 0.00 2.66
2551 2618 2.592102 AACTGTTGTCCCTGCATCAT 57.408 45.000 0.00 0.00 0.00 2.45
2561 2629 5.263599 TGTCCCTGCATCATCTAATTGTTT 58.736 37.500 0.00 0.00 0.00 2.83
2562 2630 5.357878 TGTCCCTGCATCATCTAATTGTTTC 59.642 40.000 0.00 0.00 0.00 2.78
2563 2631 5.357878 GTCCCTGCATCATCTAATTGTTTCA 59.642 40.000 0.00 0.00 0.00 2.69
2564 2632 6.040166 GTCCCTGCATCATCTAATTGTTTCAT 59.960 38.462 0.00 0.00 0.00 2.57
2565 2633 6.040054 TCCCTGCATCATCTAATTGTTTCATG 59.960 38.462 0.00 0.00 0.00 3.07
2569 2638 7.477494 TGCATCATCTAATTGTTTCATGTCTG 58.523 34.615 0.00 0.00 0.00 3.51
2638 2707 1.544314 GGACAAGCTTTCCTGTCTGCT 60.544 52.381 14.30 0.00 37.37 4.24
2675 2744 6.203145 CAGAAGAAGTCTATCCGTTCTATCGA 59.797 42.308 0.00 0.00 33.56 3.59
2819 2888 8.481492 AATATGAATGGCCTGTTGAATCATTA 57.519 30.769 3.32 0.00 0.00 1.90
2822 2891 6.422333 TGAATGGCCTGTTGAATCATTACTA 58.578 36.000 3.32 0.00 0.00 1.82
2869 2938 1.750193 CTGTGGTTGTTGTCCTGTGT 58.250 50.000 0.00 0.00 0.00 3.72
2891 2960 8.123575 TGTGTTTGAATTTGATGCTTCATTTTG 58.876 29.630 2.75 0.00 31.83 2.44
2926 2998 7.362574 CCCAAGGAAAATGTTATACGTTCACAT 60.363 37.037 0.00 0.00 32.31 3.21
2944 3016 5.590145 TCACATGGTTTGAAACATTCTGTG 58.410 37.500 10.53 15.02 33.26 3.66
2951 3023 5.973565 GGTTTGAAACATTCTGTGAAGAGTG 59.026 40.000 10.53 0.00 0.00 3.51
2968 3040 2.560105 GAGTGAAGCAAAATTCTGGCCT 59.440 45.455 3.32 0.00 0.00 5.19
2970 3042 3.389002 AGTGAAGCAAAATTCTGGCCTTT 59.611 39.130 3.32 0.00 0.00 3.11
2978 3050 2.603075 ATTCTGGCCTTTGCACCTTA 57.397 45.000 3.32 0.00 40.13 2.69
2979 3051 2.603075 TTCTGGCCTTTGCACCTTAT 57.397 45.000 3.32 0.00 40.13 1.73
2980 3052 2.603075 TCTGGCCTTTGCACCTTATT 57.397 45.000 3.32 0.00 40.13 1.40
2981 3053 2.888212 TCTGGCCTTTGCACCTTATTT 58.112 42.857 3.32 0.00 40.13 1.40
2983 3055 3.645687 TCTGGCCTTTGCACCTTATTTTT 59.354 39.130 3.32 0.00 40.13 1.94
3046 3125 2.426024 TCTGGTTAGTGTATCGTCTGCC 59.574 50.000 0.00 0.00 0.00 4.85
3075 3154 4.524316 TTTGCTGGCGTTTAGTAGAGTA 57.476 40.909 0.00 0.00 0.00 2.59
3076 3155 3.777465 TGCTGGCGTTTAGTAGAGTAG 57.223 47.619 0.00 0.00 0.00 2.57
3077 3156 3.087031 TGCTGGCGTTTAGTAGAGTAGT 58.913 45.455 0.00 0.00 0.00 2.73
3078 3157 4.264253 TGCTGGCGTTTAGTAGAGTAGTA 58.736 43.478 0.00 0.00 0.00 1.82
3079 3158 4.095483 TGCTGGCGTTTAGTAGAGTAGTAC 59.905 45.833 0.00 0.00 0.00 2.73
3080 3159 4.335037 GCTGGCGTTTAGTAGAGTAGTACT 59.665 45.833 1.37 1.37 37.09 2.73
3081 3160 5.503846 GCTGGCGTTTAGTAGAGTAGTACTC 60.504 48.000 20.73 20.73 45.38 2.59
3082 3161 4.878397 TGGCGTTTAGTAGAGTAGTACTCC 59.122 45.833 23.82 11.67 46.18 3.85
3083 3162 4.274705 GGCGTTTAGTAGAGTAGTACTCCC 59.725 50.000 23.82 15.83 46.18 4.30
3084 3163 5.122519 GCGTTTAGTAGAGTAGTACTCCCT 58.877 45.833 23.82 20.98 46.18 4.20
3085 3164 5.236263 GCGTTTAGTAGAGTAGTACTCCCTC 59.764 48.000 23.82 15.12 46.18 4.30
3086 3165 5.757808 CGTTTAGTAGAGTAGTACTCCCTCC 59.242 48.000 23.82 11.15 46.18 4.30
3087 3166 5.543507 TTAGTAGAGTAGTACTCCCTCCG 57.456 47.826 23.82 0.00 46.18 4.63
3088 3167 3.383223 AGTAGAGTAGTACTCCCTCCGT 58.617 50.000 23.82 9.26 46.18 4.69
3089 3168 3.387699 AGTAGAGTAGTACTCCCTCCGTC 59.612 52.174 23.82 8.96 46.18 4.79
3090 3169 2.480390 AGAGTAGTACTCCCTCCGTCT 58.520 52.381 23.82 2.98 46.18 4.18
3091 3170 2.171027 AGAGTAGTACTCCCTCCGTCTG 59.829 54.545 23.82 0.00 46.18 3.51
3092 3171 1.212441 AGTAGTACTCCCTCCGTCTGG 59.788 57.143 0.00 0.00 0.00 3.86
3093 3172 1.064832 GTAGTACTCCCTCCGTCTGGT 60.065 57.143 0.00 0.00 36.30 4.00
3094 3173 0.323542 AGTACTCCCTCCGTCTGGTG 60.324 60.000 0.00 0.00 36.30 4.17
3095 3174 0.323178 GTACTCCCTCCGTCTGGTGA 60.323 60.000 0.00 0.00 36.30 4.02
3096 3175 0.406750 TACTCCCTCCGTCTGGTGAA 59.593 55.000 0.00 0.00 36.30 3.18
3097 3176 0.900647 ACTCCCTCCGTCTGGTGAAG 60.901 60.000 0.00 0.00 36.30 3.02
3098 3177 0.612174 CTCCCTCCGTCTGGTGAAGA 60.612 60.000 0.00 0.00 36.30 2.87
3099 3178 0.612174 TCCCTCCGTCTGGTGAAGAG 60.612 60.000 0.00 0.00 34.84 2.85
3100 3179 0.900647 CCCTCCGTCTGGTGAAGAGT 60.901 60.000 0.00 0.00 34.84 3.24
3101 3180 0.244994 CCTCCGTCTGGTGAAGAGTG 59.755 60.000 0.00 0.00 34.84 3.51
3102 3181 1.248486 CTCCGTCTGGTGAAGAGTGA 58.752 55.000 0.00 0.00 34.84 3.41
3103 3182 1.613925 CTCCGTCTGGTGAAGAGTGAA 59.386 52.381 0.00 0.00 34.84 3.18
3104 3183 1.340248 TCCGTCTGGTGAAGAGTGAAC 59.660 52.381 0.00 0.00 34.84 3.18
3105 3184 1.068588 CCGTCTGGTGAAGAGTGAACA 59.931 52.381 0.00 0.00 34.84 3.18
3106 3185 2.289072 CCGTCTGGTGAAGAGTGAACAT 60.289 50.000 0.00 0.00 34.84 2.71
3107 3186 2.989840 CGTCTGGTGAAGAGTGAACATC 59.010 50.000 0.00 0.00 34.84 3.06
3108 3187 3.305676 CGTCTGGTGAAGAGTGAACATCT 60.306 47.826 0.00 0.00 34.84 2.90
3109 3188 4.082733 CGTCTGGTGAAGAGTGAACATCTA 60.083 45.833 0.00 0.00 34.84 1.98
3110 3189 5.406649 GTCTGGTGAAGAGTGAACATCTAG 58.593 45.833 0.00 0.00 34.84 2.43
3111 3190 5.184096 GTCTGGTGAAGAGTGAACATCTAGA 59.816 44.000 0.00 0.00 34.84 2.43
3112 3191 5.417266 TCTGGTGAAGAGTGAACATCTAGAG 59.583 44.000 0.00 0.00 0.00 2.43
3113 3192 5.325239 TGGTGAAGAGTGAACATCTAGAGA 58.675 41.667 0.00 0.00 0.00 3.10
3114 3193 5.954752 TGGTGAAGAGTGAACATCTAGAGAT 59.045 40.000 0.00 0.00 34.56 2.75
3115 3194 6.438741 TGGTGAAGAGTGAACATCTAGAGATT 59.561 38.462 0.00 0.00 31.21 2.40
3116 3195 7.038729 TGGTGAAGAGTGAACATCTAGAGATTT 60.039 37.037 0.00 0.00 31.21 2.17
3117 3196 7.821846 GGTGAAGAGTGAACATCTAGAGATTTT 59.178 37.037 0.00 0.00 31.21 1.82
3118 3197 9.862371 GTGAAGAGTGAACATCTAGAGATTTTA 57.138 33.333 0.00 0.00 31.21 1.52
3120 3199 9.528018 GAAGAGTGAACATCTAGAGATTTTAGG 57.472 37.037 0.00 0.00 31.21 2.69
3121 3200 8.830915 AGAGTGAACATCTAGAGATTTTAGGA 57.169 34.615 0.00 0.00 31.21 2.94
3122 3201 8.691797 AGAGTGAACATCTAGAGATTTTAGGAC 58.308 37.037 0.00 0.00 31.21 3.85
3123 3202 8.367660 AGTGAACATCTAGAGATTTTAGGACA 57.632 34.615 0.00 0.00 31.21 4.02
3124 3203 8.816894 AGTGAACATCTAGAGATTTTAGGACAA 58.183 33.333 0.00 0.00 31.21 3.18
3125 3204 9.436957 GTGAACATCTAGAGATTTTAGGACAAA 57.563 33.333 0.00 0.00 31.21 2.83
3135 3214 9.401058 AGAGATTTTAGGACAAATTATGGAGTG 57.599 33.333 0.00 0.00 0.00 3.51
3136 3215 9.396022 GAGATTTTAGGACAAATTATGGAGTGA 57.604 33.333 0.00 0.00 0.00 3.41
3137 3216 9.753674 AGATTTTAGGACAAATTATGGAGTGAA 57.246 29.630 0.00 0.00 0.00 3.18
3139 3218 8.934023 TTTTAGGACAAATTATGGAGTGAAGT 57.066 30.769 0.00 0.00 0.00 3.01
3143 3222 8.934023 AGGACAAATTATGGAGTGAAGTAAAA 57.066 30.769 0.00 0.00 0.00 1.52
3144 3223 9.362151 AGGACAAATTATGGAGTGAAGTAAAAA 57.638 29.630 0.00 0.00 0.00 1.94
3207 3286 6.978343 CATTGGAAAAATGCAAGTCATCAT 57.022 33.333 0.00 0.00 33.40 2.45
3208 3287 7.000575 CATTGGAAAAATGCAAGTCATCATC 57.999 36.000 0.00 0.00 33.40 2.92
3209 3288 5.988310 TGGAAAAATGCAAGTCATCATCT 57.012 34.783 0.00 0.00 33.40 2.90
3210 3289 5.957798 TGGAAAAATGCAAGTCATCATCTC 58.042 37.500 0.00 0.00 33.40 2.75
3211 3290 5.713389 TGGAAAAATGCAAGTCATCATCTCT 59.287 36.000 0.00 0.00 33.40 3.10
3212 3291 6.127814 TGGAAAAATGCAAGTCATCATCTCTC 60.128 38.462 0.00 0.00 33.40 3.20
3213 3292 5.831702 AAAATGCAAGTCATCATCTCTCC 57.168 39.130 0.00 0.00 33.40 3.71
3214 3293 2.996249 TGCAAGTCATCATCTCTCCC 57.004 50.000 0.00 0.00 0.00 4.30
3215 3294 1.487976 TGCAAGTCATCATCTCTCCCC 59.512 52.381 0.00 0.00 0.00 4.81
3216 3295 1.767681 GCAAGTCATCATCTCTCCCCT 59.232 52.381 0.00 0.00 0.00 4.79
3217 3296 2.224257 GCAAGTCATCATCTCTCCCCTC 60.224 54.545 0.00 0.00 0.00 4.30
3218 3297 3.307506 CAAGTCATCATCTCTCCCCTCT 58.692 50.000 0.00 0.00 0.00 3.69
3219 3298 3.704545 AGTCATCATCTCTCCCCTCTT 57.295 47.619 0.00 0.00 0.00 2.85
3220 3299 4.006247 AGTCATCATCTCTCCCCTCTTT 57.994 45.455 0.00 0.00 0.00 2.52
3221 3300 5.149584 AGTCATCATCTCTCCCCTCTTTA 57.850 43.478 0.00 0.00 0.00 1.85
3222 3301 5.533112 AGTCATCATCTCTCCCCTCTTTAA 58.467 41.667 0.00 0.00 0.00 1.52
3223 3302 6.149616 AGTCATCATCTCTCCCCTCTTTAAT 58.850 40.000 0.00 0.00 0.00 1.40
3224 3303 6.619023 AGTCATCATCTCTCCCCTCTTTAATT 59.381 38.462 0.00 0.00 0.00 1.40
3225 3304 7.791766 AGTCATCATCTCTCCCCTCTTTAATTA 59.208 37.037 0.00 0.00 0.00 1.40
3226 3305 8.432805 GTCATCATCTCTCCCCTCTTTAATTAA 58.567 37.037 0.00 0.00 0.00 1.40
3227 3306 8.432805 TCATCATCTCTCCCCTCTTTAATTAAC 58.567 37.037 0.00 0.00 0.00 2.01
3228 3307 7.138054 TCATCTCTCCCCTCTTTAATTAACC 57.862 40.000 0.00 0.00 0.00 2.85
3229 3308 6.676632 TCATCTCTCCCCTCTTTAATTAACCA 59.323 38.462 0.00 0.00 0.00 3.67
3230 3309 6.963117 TCTCTCCCCTCTTTAATTAACCAA 57.037 37.500 0.00 0.00 0.00 3.67
3231 3310 6.718294 TCTCTCCCCTCTTTAATTAACCAAC 58.282 40.000 0.00 0.00 0.00 3.77
3232 3311 6.504279 TCTCTCCCCTCTTTAATTAACCAACT 59.496 38.462 0.00 0.00 0.00 3.16
3233 3312 7.018249 TCTCTCCCCTCTTTAATTAACCAACTT 59.982 37.037 0.00 0.00 0.00 2.66
3234 3313 7.173032 TCTCCCCTCTTTAATTAACCAACTTC 58.827 38.462 0.00 0.00 0.00 3.01
3235 3314 6.250711 TCCCCTCTTTAATTAACCAACTTCC 58.749 40.000 0.00 0.00 0.00 3.46
3236 3315 6.014012 CCCCTCTTTAATTAACCAACTTCCA 58.986 40.000 0.00 0.00 0.00 3.53
3237 3316 6.495526 CCCCTCTTTAATTAACCAACTTCCAA 59.504 38.462 0.00 0.00 0.00 3.53
3238 3317 7.180229 CCCCTCTTTAATTAACCAACTTCCAAT 59.820 37.037 0.00 0.00 0.00 3.16
3239 3318 8.034804 CCCTCTTTAATTAACCAACTTCCAATG 58.965 37.037 0.00 0.00 0.00 2.82
3240 3319 8.802267 CCTCTTTAATTAACCAACTTCCAATGA 58.198 33.333 0.00 0.00 0.00 2.57
3241 3320 9.846248 CTCTTTAATTAACCAACTTCCAATGAG 57.154 33.333 0.00 0.00 0.00 2.90
3242 3321 8.303876 TCTTTAATTAACCAACTTCCAATGAGC 58.696 33.333 0.00 0.00 0.00 4.26
3243 3322 7.775053 TTAATTAACCAACTTCCAATGAGCT 57.225 32.000 0.00 0.00 0.00 4.09
3244 3323 8.871629 TTAATTAACCAACTTCCAATGAGCTA 57.128 30.769 0.00 0.00 0.00 3.32
3245 3324 7.775053 AATTAACCAACTTCCAATGAGCTAA 57.225 32.000 0.00 0.00 0.00 3.09
3246 3325 6.817765 TTAACCAACTTCCAATGAGCTAAG 57.182 37.500 0.00 0.00 0.00 2.18
3247 3326 3.084786 ACCAACTTCCAATGAGCTAAGC 58.915 45.455 0.00 0.00 0.00 3.09
3248 3327 2.096496 CCAACTTCCAATGAGCTAAGCG 59.904 50.000 0.00 0.00 0.00 4.68
3249 3328 1.373570 ACTTCCAATGAGCTAAGCGC 58.626 50.000 0.00 0.00 39.57 5.92
3250 3329 1.339055 ACTTCCAATGAGCTAAGCGCA 60.339 47.619 11.47 0.00 43.16 6.09
3258 3337 4.963276 ATGAGCTAAGCGCATGTAAAAA 57.037 36.364 11.47 0.00 46.31 1.94
3259 3338 4.963276 TGAGCTAAGCGCATGTAAAAAT 57.037 36.364 11.47 0.00 42.61 1.82
3260 3339 5.309323 TGAGCTAAGCGCATGTAAAAATT 57.691 34.783 11.47 0.00 42.61 1.82
3261 3340 6.429791 TGAGCTAAGCGCATGTAAAAATTA 57.570 33.333 11.47 0.00 42.61 1.40
3262 3341 6.847400 TGAGCTAAGCGCATGTAAAAATTAA 58.153 32.000 11.47 0.00 42.61 1.40
3263 3342 6.966632 TGAGCTAAGCGCATGTAAAAATTAAG 59.033 34.615 11.47 0.00 42.61 1.85
3264 3343 7.083875 AGCTAAGCGCATGTAAAAATTAAGA 57.916 32.000 11.47 0.00 42.61 2.10
3265 3344 7.535139 AGCTAAGCGCATGTAAAAATTAAGAA 58.465 30.769 11.47 0.00 42.61 2.52
3266 3345 7.698130 AGCTAAGCGCATGTAAAAATTAAGAAG 59.302 33.333 11.47 0.00 42.61 2.85
3267 3346 7.696453 GCTAAGCGCATGTAAAAATTAAGAAGA 59.304 33.333 11.47 0.00 38.92 2.87
3268 3347 7.796958 AAGCGCATGTAAAAATTAAGAAGAC 57.203 32.000 11.47 0.00 0.00 3.01
3269 3348 6.908825 AGCGCATGTAAAAATTAAGAAGACA 58.091 32.000 11.47 0.00 0.00 3.41
3270 3349 7.367285 AGCGCATGTAAAAATTAAGAAGACAA 58.633 30.769 11.47 0.00 0.00 3.18
3271 3350 8.028938 AGCGCATGTAAAAATTAAGAAGACAAT 58.971 29.630 11.47 0.00 0.00 2.71
3272 3351 8.103924 GCGCATGTAAAAATTAAGAAGACAATG 58.896 33.333 0.30 0.00 0.00 2.82
3273 3352 9.128107 CGCATGTAAAAATTAAGAAGACAATGT 57.872 29.630 0.00 0.00 0.00 2.71
3281 3360 9.899226 AAAATTAAGAAGACAATGTGTAGCTTC 57.101 29.630 0.00 0.00 33.76 3.86
3282 3361 8.854614 AATTAAGAAGACAATGTGTAGCTTCT 57.145 30.769 8.65 8.65 40.84 2.85
3283 3362 8.854614 ATTAAGAAGACAATGTGTAGCTTCTT 57.145 30.769 22.60 22.60 45.43 2.52
3284 3363 9.944376 ATTAAGAAGACAATGTGTAGCTTCTTA 57.056 29.630 21.17 21.17 43.58 2.10
3285 3364 9.944376 TTAAGAAGACAATGTGTAGCTTCTTAT 57.056 29.630 23.56 11.25 44.32 1.73
3286 3365 8.854614 AAGAAGACAATGTGTAGCTTCTTATT 57.145 30.769 19.63 4.93 43.58 1.40
3287 3366 8.261492 AGAAGACAATGTGTAGCTTCTTATTG 57.739 34.615 8.65 14.06 37.93 1.90
3288 3367 6.992063 AGACAATGTGTAGCTTCTTATTGG 57.008 37.500 17.46 6.58 31.64 3.16
3289 3368 6.476378 AGACAATGTGTAGCTTCTTATTGGT 58.524 36.000 17.46 8.59 31.64 3.67
3290 3369 6.595716 AGACAATGTGTAGCTTCTTATTGGTC 59.404 38.462 17.46 13.67 31.64 4.02
3291 3370 6.476378 ACAATGTGTAGCTTCTTATTGGTCT 58.524 36.000 17.46 2.71 31.64 3.85
3292 3371 6.942576 ACAATGTGTAGCTTCTTATTGGTCTT 59.057 34.615 17.46 2.48 31.64 3.01
3293 3372 6.992063 ATGTGTAGCTTCTTATTGGTCTTG 57.008 37.500 0.00 0.00 0.00 3.02
3294 3373 6.109156 TGTGTAGCTTCTTATTGGTCTTGA 57.891 37.500 0.00 0.00 0.00 3.02
3295 3374 6.711277 TGTGTAGCTTCTTATTGGTCTTGAT 58.289 36.000 0.00 0.00 0.00 2.57
3296 3375 7.168219 TGTGTAGCTTCTTATTGGTCTTGATT 58.832 34.615 0.00 0.00 0.00 2.57
3297 3376 8.318412 TGTGTAGCTTCTTATTGGTCTTGATTA 58.682 33.333 0.00 0.00 0.00 1.75
3298 3377 8.604890 GTGTAGCTTCTTATTGGTCTTGATTAC 58.395 37.037 0.00 0.00 0.00 1.89
3299 3378 7.769044 TGTAGCTTCTTATTGGTCTTGATTACC 59.231 37.037 0.00 0.00 37.53 2.85
3300 3379 5.817816 AGCTTCTTATTGGTCTTGATTACCG 59.182 40.000 0.00 0.00 40.08 4.02
3301 3380 5.585047 GCTTCTTATTGGTCTTGATTACCGT 59.415 40.000 0.00 0.00 40.08 4.83
3302 3381 6.456988 GCTTCTTATTGGTCTTGATTACCGTG 60.457 42.308 0.00 0.00 40.08 4.94
3303 3382 6.045072 TCTTATTGGTCTTGATTACCGTGT 57.955 37.500 0.00 0.00 40.08 4.49
3304 3383 5.872617 TCTTATTGGTCTTGATTACCGTGTG 59.127 40.000 0.00 0.00 40.08 3.82
3305 3384 3.755112 TTGGTCTTGATTACCGTGTGA 57.245 42.857 0.00 0.00 40.08 3.58
3306 3385 3.973206 TGGTCTTGATTACCGTGTGAT 57.027 42.857 0.00 0.00 40.08 3.06
3307 3386 3.595173 TGGTCTTGATTACCGTGTGATG 58.405 45.455 0.00 0.00 40.08 3.07
3308 3387 3.259625 TGGTCTTGATTACCGTGTGATGA 59.740 43.478 0.00 0.00 40.08 2.92
3309 3388 3.865745 GGTCTTGATTACCGTGTGATGAG 59.134 47.826 0.00 0.00 0.00 2.90
3310 3389 4.381612 GGTCTTGATTACCGTGTGATGAGA 60.382 45.833 0.00 0.00 0.00 3.27
3311 3390 4.800993 GTCTTGATTACCGTGTGATGAGAG 59.199 45.833 0.00 0.00 0.00 3.20
3312 3391 4.705023 TCTTGATTACCGTGTGATGAGAGA 59.295 41.667 0.00 0.00 0.00 3.10
3313 3392 4.639135 TGATTACCGTGTGATGAGAGAG 57.361 45.455 0.00 0.00 0.00 3.20
3314 3393 4.270008 TGATTACCGTGTGATGAGAGAGA 58.730 43.478 0.00 0.00 0.00 3.10
3315 3394 4.705023 TGATTACCGTGTGATGAGAGAGAA 59.295 41.667 0.00 0.00 0.00 2.87
3316 3395 4.703645 TTACCGTGTGATGAGAGAGAAG 57.296 45.455 0.00 0.00 0.00 2.85
3317 3396 2.520069 ACCGTGTGATGAGAGAGAAGT 58.480 47.619 0.00 0.00 0.00 3.01
3318 3397 3.687125 ACCGTGTGATGAGAGAGAAGTA 58.313 45.455 0.00 0.00 0.00 2.24
3319 3398 4.274147 ACCGTGTGATGAGAGAGAAGTAT 58.726 43.478 0.00 0.00 0.00 2.12
3320 3399 4.707448 ACCGTGTGATGAGAGAGAAGTATT 59.293 41.667 0.00 0.00 0.00 1.89
3321 3400 5.186021 ACCGTGTGATGAGAGAGAAGTATTT 59.814 40.000 0.00 0.00 0.00 1.40
3322 3401 6.102663 CCGTGTGATGAGAGAGAAGTATTTT 58.897 40.000 0.00 0.00 0.00 1.82
3323 3402 6.591834 CCGTGTGATGAGAGAGAAGTATTTTT 59.408 38.462 0.00 0.00 0.00 1.94
3324 3403 7.759886 CCGTGTGATGAGAGAGAAGTATTTTTA 59.240 37.037 0.00 0.00 0.00 1.52
3325 3404 9.307121 CGTGTGATGAGAGAGAAGTATTTTTAT 57.693 33.333 0.00 0.00 0.00 1.40
3388 3467 9.965824 TTTTTGTGAACAAATTTTAAAGCCAAA 57.034 22.222 9.29 0.00 44.30 3.28
3389 3468 8.956617 TTTGTGAACAAATTTTAAAGCCAAAC 57.043 26.923 4.52 0.00 40.55 2.93
3390 3469 6.766084 TGTGAACAAATTTTAAAGCCAAACG 58.234 32.000 0.00 0.00 0.00 3.60
3391 3470 6.369065 TGTGAACAAATTTTAAAGCCAAACGT 59.631 30.769 0.00 0.00 0.00 3.99
3392 3471 7.095187 TGTGAACAAATTTTAAAGCCAAACGTT 60.095 29.630 0.00 0.00 0.00 3.99
3393 3472 7.424167 GTGAACAAATTTTAAAGCCAAACGTTC 59.576 33.333 0.00 0.00 0.00 3.95
3394 3473 6.969828 ACAAATTTTAAAGCCAAACGTTCA 57.030 29.167 0.00 0.00 0.00 3.18
3395 3474 6.767080 ACAAATTTTAAAGCCAAACGTTCAC 58.233 32.000 0.00 0.00 0.00 3.18
3396 3475 6.592220 ACAAATTTTAAAGCCAAACGTTCACT 59.408 30.769 0.00 0.00 0.00 3.41
3397 3476 6.822073 AATTTTAAAGCCAAACGTTCACTC 57.178 33.333 0.00 0.00 0.00 3.51
3398 3477 5.570234 TTTTAAAGCCAAACGTTCACTCT 57.430 34.783 0.00 0.00 0.00 3.24
3399 3478 5.570234 TTTAAAGCCAAACGTTCACTCTT 57.430 34.783 0.00 0.25 0.00 2.85
3400 3479 5.570234 TTAAAGCCAAACGTTCACTCTTT 57.430 34.783 0.00 11.28 0.00 2.52
3401 3480 6.680874 TTAAAGCCAAACGTTCACTCTTTA 57.319 33.333 0.00 10.36 0.00 1.85
3402 3481 4.547406 AAGCCAAACGTTCACTCTTTAC 57.453 40.909 0.00 0.00 0.00 2.01
3403 3482 2.876550 AGCCAAACGTTCACTCTTTACC 59.123 45.455 0.00 0.00 0.00 2.85
3404 3483 2.349155 GCCAAACGTTCACTCTTTACCG 60.349 50.000 0.00 0.00 0.00 4.02
3405 3484 2.222445 CCAAACGTTCACTCTTTACCGG 59.778 50.000 0.00 0.00 0.00 5.28
3406 3485 3.125316 CAAACGTTCACTCTTTACCGGA 58.875 45.455 9.46 0.00 0.00 5.14
3407 3486 2.428888 ACGTTCACTCTTTACCGGAC 57.571 50.000 9.46 0.00 0.00 4.79
3408 3487 1.334054 CGTTCACTCTTTACCGGACG 58.666 55.000 9.46 0.00 0.00 4.79
3409 3488 1.706443 GTTCACTCTTTACCGGACGG 58.294 55.000 9.46 9.56 42.03 4.79
3410 3489 1.270550 GTTCACTCTTTACCGGACGGA 59.729 52.381 18.80 0.00 38.96 4.69
3411 3490 1.171308 TCACTCTTTACCGGACGGAG 58.829 55.000 18.80 12.33 38.96 4.63
3412 3491 0.172803 CACTCTTTACCGGACGGAGG 59.827 60.000 18.80 4.47 38.96 4.30
3413 3492 0.969409 ACTCTTTACCGGACGGAGGG 60.969 60.000 18.80 7.01 38.96 4.30
3422 3501 0.950116 CGGACGGAGGGAGTATACAC 59.050 60.000 5.50 0.00 0.00 2.90
3427 3506 3.698040 GACGGAGGGAGTATACACTTTCA 59.302 47.826 5.50 0.00 34.21 2.69
3499 3578 1.419922 CATCCGAACCGCGTTTCAG 59.580 57.895 16.82 5.17 38.67 3.02
3516 3595 8.318167 CGCGTTTCAGTTTCTCTTTTTAAAAAT 58.682 29.630 13.55 0.00 0.00 1.82
3550 3629 3.940209 TTCATGTCAGTTTGCCATTCC 57.060 42.857 0.00 0.00 0.00 3.01
3551 3630 2.874014 TCATGTCAGTTTGCCATTCCA 58.126 42.857 0.00 0.00 0.00 3.53
3559 3638 1.627834 GTTTGCCATTCCATTTCCCCA 59.372 47.619 0.00 0.00 0.00 4.96
3560 3639 1.274712 TTGCCATTCCATTTCCCCAC 58.725 50.000 0.00 0.00 0.00 4.61
3561 3640 0.413037 TGCCATTCCATTTCCCCACT 59.587 50.000 0.00 0.00 0.00 4.00
3563 3642 1.482182 GCCATTCCATTTCCCCACTTC 59.518 52.381 0.00 0.00 0.00 3.01
3564 3643 2.110578 CCATTCCATTTCCCCACTTCC 58.889 52.381 0.00 0.00 0.00 3.46
3570 3653 2.972021 CCATTTCCCCACTTCCTTGTTT 59.028 45.455 0.00 0.00 0.00 2.83
3591 3674 7.466804 TGTTTGAAATCCCTAGAATTACCAGT 58.533 34.615 0.00 0.00 0.00 4.00
3644 3727 6.547141 TGAGAATTGACCAAACATGATATCCC 59.453 38.462 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 4.579869 TCCTTTCTCCACTAGCAAATGTC 58.420 43.478 0.00 0.00 0.00 3.06
10 11 4.640771 TCCTTTCTCCACTAGCAAATGT 57.359 40.909 0.00 0.00 0.00 2.71
37 38 1.380112 GTCGAGCCCCTAGGTGAGT 60.380 63.158 8.29 0.00 34.57 3.41
58 59 3.716195 CCCATGCCCTCACGGTGA 61.716 66.667 10.88 10.88 0.00 4.02
71 72 4.853050 GCAGCAGCTCTCGCCCAT 62.853 66.667 0.00 0.00 37.91 4.00
91 92 3.274586 CATCATCGCCAGTGCCGG 61.275 66.667 0.00 0.00 0.00 6.13
92 93 1.368345 TTTCATCATCGCCAGTGCCG 61.368 55.000 0.00 0.00 0.00 5.69
94 95 2.874701 AGTATTTCATCATCGCCAGTGC 59.125 45.455 0.00 0.00 0.00 4.40
96 97 4.679373 AGAGTATTTCATCATCGCCAGT 57.321 40.909 0.00 0.00 0.00 4.00
132 133 3.578688 GGATGAAGATTGTTGTGGCAAC 58.421 45.455 5.17 5.17 0.00 4.17
206 208 2.668550 GGACAAGGCGTGGTGGAC 60.669 66.667 5.22 0.00 0.00 4.02
261 263 3.410628 TCTCATGGGCATGGCGGT 61.411 61.111 13.76 0.79 39.24 5.68
274 276 4.871822 TCTCTCTCTCTCTCTCTCTCTCA 58.128 47.826 0.00 0.00 0.00 3.27
275 277 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
282 284 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
283 285 4.280677 CCTCTCTCTCTCTCTCTCTCTCTC 59.719 54.167 0.00 0.00 0.00 3.20
284 286 4.078922 TCCTCTCTCTCTCTCTCTCTCTCT 60.079 50.000 0.00 0.00 0.00 3.10
285 287 4.219115 TCCTCTCTCTCTCTCTCTCTCTC 58.781 52.174 0.00 0.00 0.00 3.20
286 288 4.078922 TCTCCTCTCTCTCTCTCTCTCTCT 60.079 50.000 0.00 0.00 0.00 3.10
287 289 4.219115 TCTCCTCTCTCTCTCTCTCTCTC 58.781 52.174 0.00 0.00 0.00 3.20
288 290 4.222336 CTCTCCTCTCTCTCTCTCTCTCT 58.778 52.174 0.00 0.00 0.00 3.10
289 291 3.323403 CCTCTCCTCTCTCTCTCTCTCTC 59.677 56.522 0.00 0.00 0.00 3.20
290 292 3.312890 CCTCTCCTCTCTCTCTCTCTCT 58.687 54.545 0.00 0.00 0.00 3.10
291 293 2.370189 CCCTCTCCTCTCTCTCTCTCTC 59.630 59.091 0.00 0.00 0.00 3.20
292 294 2.022035 TCCCTCTCCTCTCTCTCTCTCT 60.022 54.545 0.00 0.00 0.00 3.10
293 295 2.370189 CTCCCTCTCCTCTCTCTCTCTC 59.630 59.091 0.00 0.00 0.00 3.20
294 296 2.022035 TCTCCCTCTCCTCTCTCTCTCT 60.022 54.545 0.00 0.00 0.00 3.10
295 297 2.370189 CTCTCCCTCTCCTCTCTCTCTC 59.630 59.091 0.00 0.00 0.00 3.20
296 298 2.412591 CTCTCCCTCTCCTCTCTCTCT 58.587 57.143 0.00 0.00 0.00 3.10
297 299 1.421646 CCTCTCCCTCTCCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
298 300 1.010793 TCCTCTCCCTCTCCTCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
299 301 1.421646 CTCCTCTCCCTCTCCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
300 302 1.275002 ACTCCTCTCCCTCTCCTCTCT 60.275 57.143 0.00 0.00 0.00 3.10
301 303 1.222567 ACTCCTCTCCCTCTCCTCTC 58.777 60.000 0.00 0.00 0.00 3.20
302 304 2.512476 GTTACTCCTCTCCCTCTCCTCT 59.488 54.545 0.00 0.00 0.00 3.69
303 305 2.512476 AGTTACTCCTCTCCCTCTCCTC 59.488 54.545 0.00 0.00 0.00 3.71
304 306 2.580232 AGTTACTCCTCTCCCTCTCCT 58.420 52.381 0.00 0.00 0.00 3.69
305 307 3.028130 CAAGTTACTCCTCTCCCTCTCC 58.972 54.545 0.00 0.00 0.00 3.71
320 322 3.162666 TCGCTTTCTCTCCCTCAAGTTA 58.837 45.455 0.00 0.00 0.00 2.24
325 327 0.972983 CCCTCGCTTTCTCTCCCTCA 60.973 60.000 0.00 0.00 0.00 3.86
346 348 3.141488 CTCCCTCCGTCACTCCCG 61.141 72.222 0.00 0.00 0.00 5.14
348 350 3.827898 CGCTCCCTCCGTCACTCC 61.828 72.222 0.00 0.00 0.00 3.85
380 382 3.649277 CTGTCCGAAGCGACTGGGG 62.649 68.421 0.00 0.00 33.70 4.96
396 398 1.349627 CGCGCCATTAACAGCTCTG 59.650 57.895 0.00 0.00 0.00 3.35
402 404 3.492545 GACGGCGCGCCATTAACA 61.493 61.111 45.26 0.00 35.37 2.41
403 405 4.568876 CGACGGCGCGCCATTAAC 62.569 66.667 45.26 28.82 35.37 2.01
430 432 0.991920 ATGGTTGATCCCTCGTGGTT 59.008 50.000 2.33 0.00 34.77 3.67
434 436 1.275666 TGACATGGTTGATCCCTCGT 58.724 50.000 0.00 0.00 34.77 4.18
444 446 6.482973 CCTTTTTAGCACATTTTGACATGGTT 59.517 34.615 0.00 0.00 0.00 3.67
445 447 5.990996 CCTTTTTAGCACATTTTGACATGGT 59.009 36.000 0.00 0.00 0.00 3.55
449 451 5.163468 TGAGCCTTTTTAGCACATTTTGACA 60.163 36.000 0.00 0.00 0.00 3.58
457 459 4.935352 AACATTGAGCCTTTTTAGCACA 57.065 36.364 0.00 0.00 0.00 4.57
458 460 6.037062 ACAAAAACATTGAGCCTTTTTAGCAC 59.963 34.615 0.00 0.00 0.00 4.40
463 465 5.353956 GGTGACAAAAACATTGAGCCTTTTT 59.646 36.000 0.00 0.00 0.00 1.94
468 470 2.223711 ACGGTGACAAAAACATTGAGCC 60.224 45.455 0.00 0.00 0.00 4.70
487 492 1.126113 CACCGAACCGAAAATCTGACG 59.874 52.381 0.00 0.00 0.00 4.35
521 526 5.482908 AGCAGAAAACTATCACTTCACGAT 58.517 37.500 0.00 0.00 0.00 3.73
526 531 9.102757 TCATGATTAGCAGAAAACTATCACTTC 57.897 33.333 0.00 0.00 0.00 3.01
528 533 8.043113 TGTCATGATTAGCAGAAAACTATCACT 58.957 33.333 0.00 0.00 0.00 3.41
536 541 7.595875 CACATTTGTGTCATGATTAGCAGAAAA 59.404 33.333 9.45 3.58 40.96 2.29
541 546 4.766373 ACCACATTTGTGTCATGATTAGCA 59.234 37.500 9.66 0.00 44.21 3.49
556 561 1.187567 GGCCCAGAAGCACCACATTT 61.188 55.000 0.00 0.00 0.00 2.32
558 563 1.207488 TAGGCCCAGAAGCACCACAT 61.207 55.000 0.00 0.00 0.00 3.21
593 598 4.735358 GACCGGGAGTTTGGGCCC 62.735 72.222 17.59 17.59 41.11 5.80
669 677 4.382754 CGGCTCAAATCTGTTTGCTTTAAC 59.617 41.667 0.00 0.00 43.47 2.01
673 681 2.229792 TCGGCTCAAATCTGTTTGCTT 58.770 42.857 0.00 0.00 43.47 3.91
681 689 2.972625 TCAATCGTTCGGCTCAAATCT 58.027 42.857 0.00 0.00 0.00 2.40
789 802 2.348104 ATGCGTGACCGTGGAGCTA 61.348 57.895 0.00 0.00 36.15 3.32
919 938 1.633945 ACTAGGGTTTGGTGTGGATCC 59.366 52.381 4.20 4.20 0.00 3.36
1166 1189 7.781548 AATAAACATCGGGAGTAACACATAC 57.218 36.000 0.00 0.00 34.52 2.39
1175 1198 7.166167 ACAGAAACTAAATAAACATCGGGAGT 58.834 34.615 0.00 0.00 0.00 3.85
1214 1237 4.516698 AGCTACGGGCATGAATTTATCTTG 59.483 41.667 0.00 0.00 44.79 3.02
1216 1239 4.067896 CAGCTACGGGCATGAATTTATCT 58.932 43.478 0.00 0.00 44.79 1.98
1217 1240 3.815401 ACAGCTACGGGCATGAATTTATC 59.185 43.478 0.00 0.00 44.79 1.75
1219 1242 3.275617 ACAGCTACGGGCATGAATTTA 57.724 42.857 0.00 0.00 44.79 1.40
1244 1267 5.452078 AATGTTGTTTCGAATCACCACAT 57.548 34.783 15.82 15.82 0.00 3.21
1260 1283 4.913924 GCAGCTTGAACTACTCAAATGTTG 59.086 41.667 0.00 0.00 43.54 3.33
1275 1298 0.175760 GAGTATGACCCGCAGCTTGA 59.824 55.000 0.00 0.00 0.00 3.02
1291 1315 6.761714 AGACACTAAAATGAAACGAACAGAGT 59.238 34.615 0.00 0.00 0.00 3.24
1305 1329 9.528018 CACCATTTAACAAACAGACACTAAAAT 57.472 29.630 0.00 0.00 0.00 1.82
1309 1333 5.009210 GGCACCATTTAACAAACAGACACTA 59.991 40.000 0.00 0.00 0.00 2.74
1312 1336 4.314740 GGCACCATTTAACAAACAGACA 57.685 40.909 0.00 0.00 0.00 3.41
1351 1375 5.817296 CACAGGAAATATCAACATCCGAGAA 59.183 40.000 0.00 0.00 37.05 2.87
1356 1380 5.128919 AGAGCACAGGAAATATCAACATCC 58.871 41.667 0.00 0.00 0.00 3.51
1363 1387 6.690194 ACATGAAAGAGCACAGGAAATATC 57.310 37.500 0.00 0.00 0.00 1.63
1388 1412 9.368674 CATACAGATCTTCATTTCCTAGCATAG 57.631 37.037 0.00 0.00 38.80 2.23
1407 1434 8.792830 ATAACTTAAAAGCAAGAGCATACAGA 57.207 30.769 0.00 0.00 45.49 3.41
1408 1435 9.495754 GAATAACTTAAAAGCAAGAGCATACAG 57.504 33.333 0.00 0.00 45.49 2.74
1456 1492 5.079643 AGAATATCATTGGCCATACAACCC 58.920 41.667 6.09 0.00 32.39 4.11
1467 1503 9.227777 TCATTCAGCTTCATAGAATATCATTGG 57.772 33.333 0.00 0.00 31.26 3.16
1476 1512 7.615403 ACAACTACTCATTCAGCTTCATAGAA 58.385 34.615 0.00 0.00 0.00 2.10
1485 1521 3.365364 GCCACAACAACTACTCATTCAGC 60.365 47.826 0.00 0.00 0.00 4.26
1486 1522 4.067896 AGCCACAACAACTACTCATTCAG 58.932 43.478 0.00 0.00 0.00 3.02
1511 1547 3.737663 GCAGTTGGCAAGTTGATCAACAA 60.738 43.478 33.92 19.62 42.25 2.83
1512 1548 2.223782 GCAGTTGGCAAGTTGATCAACA 60.224 45.455 33.92 15.19 42.25 3.33
1513 1549 2.397549 GCAGTTGGCAAGTTGATCAAC 58.602 47.619 27.69 27.69 43.97 3.18
1514 1550 2.798976 GCAGTTGGCAAGTTGATCAA 57.201 45.000 7.16 3.38 43.97 2.57
1566 1625 4.034285 AGGTTACCATTGACAGGGAAAG 57.966 45.455 3.51 0.00 28.77 2.62
1570 1629 5.373812 AAGATAGGTTACCATTGACAGGG 57.626 43.478 3.51 0.00 0.00 4.45
1606 1665 8.011844 ACTCTAGATATGAGCAACATGTACAA 57.988 34.615 0.00 0.00 39.77 2.41
1608 1667 8.138074 TCAACTCTAGATATGAGCAACATGTAC 58.862 37.037 0.00 0.00 39.77 2.90
1617 1676 6.423302 CACCACATTCAACTCTAGATATGAGC 59.577 42.308 0.00 0.00 35.12 4.26
1629 1688 6.479660 CAGTTTAATTTGCACCACATTCAACT 59.520 34.615 0.00 0.00 32.05 3.16
1652 1711 5.152623 TCCAGGTACAGAGAATGAAACAG 57.847 43.478 0.00 0.00 0.00 3.16
1655 1714 6.433847 TCTTTCCAGGTACAGAGAATGAAA 57.566 37.500 0.00 0.00 0.00 2.69
1665 1724 2.438021 ACACTGCTTCTTTCCAGGTACA 59.562 45.455 0.00 0.00 33.43 2.90
1676 1735 4.946478 ACTCAGTTAAGACACTGCTTCT 57.054 40.909 0.00 0.00 43.51 2.85
1679 1738 3.134458 GCAACTCAGTTAAGACACTGCT 58.866 45.455 0.00 0.00 43.51 4.24
1683 1742 5.237344 AGAATGTGCAACTCAGTTAAGACAC 59.763 40.000 0.00 0.00 38.04 3.67
1689 1748 6.691754 TCAAAAGAATGTGCAACTCAGTTA 57.308 33.333 0.00 0.00 38.04 2.24
1729 1788 6.637658 GCAGCAAACATGCAAAATAACATTTT 59.362 30.769 3.41 0.00 43.31 1.82
1730 1789 6.016943 AGCAGCAAACATGCAAAATAACATTT 60.017 30.769 3.41 0.00 46.31 2.32
1731 1790 5.470777 AGCAGCAAACATGCAAAATAACATT 59.529 32.000 3.41 0.00 46.31 2.71
1734 1793 4.996062 AGCAGCAAACATGCAAAATAAC 57.004 36.364 3.41 0.00 46.31 1.89
1737 1796 4.904253 AAAAGCAGCAAACATGCAAAAT 57.096 31.818 3.41 0.00 46.31 1.82
1738 1797 4.874966 ACTAAAAGCAGCAAACATGCAAAA 59.125 33.333 3.41 0.00 46.31 2.44
1766 1825 6.093219 CCAGAGAATTGTCATTACCAGAACAG 59.907 42.308 5.28 0.00 0.00 3.16
1893 1954 1.089920 CACCCTTCTTCTTCATGCCG 58.910 55.000 0.00 0.00 0.00 5.69
2016 2077 2.026641 GCATCCTTTCCTGCATGCTTA 58.973 47.619 20.33 0.00 38.89 3.09
2318 2379 6.482308 TGACAAGAATATCATCTCAGCACATG 59.518 38.462 0.00 0.00 0.00 3.21
2355 2421 5.221106 GCAGCACAAAATTAGAGATATGGCA 60.221 40.000 0.00 0.00 0.00 4.92
2369 2436 1.682854 CCTGAAAGAGGCAGCACAAAA 59.317 47.619 0.00 0.00 34.01 2.44
2380 2447 0.401738 TGGTGAAGCCCCTGAAAGAG 59.598 55.000 0.00 0.00 32.96 2.85
2474 2541 6.006449 ACAATTGCCCAGGATCAAGTATATC 58.994 40.000 5.05 0.00 0.00 1.63
2486 2553 3.749665 TCTTCAAAACAATTGCCCAGG 57.250 42.857 5.05 0.00 0.00 4.45
2503 2570 7.286316 CCAAGGCAGGATAAATAAGTTCATCTT 59.714 37.037 0.00 0.00 39.89 2.40
2510 2577 7.339466 CAGTTTACCAAGGCAGGATAAATAAGT 59.661 37.037 2.81 0.00 0.00 2.24
2514 2581 5.580022 ACAGTTTACCAAGGCAGGATAAAT 58.420 37.500 2.81 0.00 0.00 1.40
2528 2595 1.975660 TGCAGGGACAACAGTTTACC 58.024 50.000 0.00 0.00 0.00 2.85
2535 2602 3.998913 TTAGATGATGCAGGGACAACA 57.001 42.857 0.00 0.00 0.00 3.33
2551 2618 6.680810 CAAAGCCAGACATGAAACAATTAGA 58.319 36.000 0.00 0.00 0.00 2.10
2561 2629 0.251033 AGCTGCAAAGCCAGACATGA 60.251 50.000 0.00 0.00 34.77 3.07
2562 2630 0.109272 CAGCTGCAAAGCCAGACATG 60.109 55.000 0.00 0.00 34.77 3.21
2563 2631 1.874345 GCAGCTGCAAAGCCAGACAT 61.874 55.000 33.36 0.00 41.59 3.06
2564 2632 2.558286 GCAGCTGCAAAGCCAGACA 61.558 57.895 33.36 0.00 41.59 3.41
2565 2633 2.197643 GAGCAGCTGCAAAGCCAGAC 62.198 60.000 38.24 14.46 45.16 3.51
2569 2638 4.112341 CCGAGCAGCTGCAAAGCC 62.112 66.667 38.24 20.20 45.16 4.35
2605 2674 2.976494 CTTGTCCAGGGGCACGGTTT 62.976 60.000 0.00 0.00 0.00 3.27
2638 2707 6.477053 AGACTTCTTCTGCTAGATTATGCA 57.523 37.500 0.00 0.00 37.63 3.96
2675 2744 6.947644 AGTTCCACACGGTAAAATAAGTTT 57.052 33.333 0.00 0.00 0.00 2.66
2819 2888 7.259290 ACATTGACAAACGAATTCAAGTAGT 57.741 32.000 6.22 0.00 32.91 2.73
2822 2891 9.528018 AAAATACATTGACAAACGAATTCAAGT 57.472 25.926 6.22 0.00 32.91 3.16
2869 2938 8.434733 TCACAAAATGAAGCATCAAATTCAAA 57.565 26.923 0.00 0.00 38.80 2.69
2891 2960 3.826729 ACATTTTCCTTGGGTAGCTTCAC 59.173 43.478 0.00 0.00 0.00 3.18
2901 2970 6.904498 TGTGAACGTATAACATTTTCCTTGG 58.096 36.000 0.00 0.00 0.00 3.61
2902 2971 7.484641 CCATGTGAACGTATAACATTTTCCTTG 59.515 37.037 7.68 0.00 32.27 3.61
2944 3016 4.233005 GCCAGAATTTTGCTTCACTCTTC 58.767 43.478 0.00 0.00 0.00 2.87
2997 3069 8.338072 TCCGGAAATTGTATACTGCTTAAAAA 57.662 30.769 0.00 0.00 0.00 1.94
2998 3070 7.925043 TCCGGAAATTGTATACTGCTTAAAA 57.075 32.000 0.00 0.00 0.00 1.52
2999 3071 7.554835 ACATCCGGAAATTGTATACTGCTTAAA 59.445 33.333 9.01 0.00 0.00 1.52
3000 3072 7.051623 ACATCCGGAAATTGTATACTGCTTAA 58.948 34.615 9.01 0.00 0.00 1.85
3001 3073 6.588204 ACATCCGGAAATTGTATACTGCTTA 58.412 36.000 9.01 0.00 0.00 3.09
3046 3125 0.318614 AACGCCAGCAAAATTGACCG 60.319 50.000 0.00 0.00 0.00 4.79
3075 3154 0.323542 CACCAGACGGAGGGAGTACT 60.324 60.000 0.00 0.00 35.59 2.73
3076 3155 0.323178 TCACCAGACGGAGGGAGTAC 60.323 60.000 0.00 0.00 35.59 2.73
3077 3156 0.406750 TTCACCAGACGGAGGGAGTA 59.593 55.000 0.00 0.00 35.59 2.59
3078 3157 0.900647 CTTCACCAGACGGAGGGAGT 60.901 60.000 0.00 0.00 35.59 3.85
3079 3158 0.612174 TCTTCACCAGACGGAGGGAG 60.612 60.000 0.00 0.00 35.59 4.30
3080 3159 0.612174 CTCTTCACCAGACGGAGGGA 60.612 60.000 0.00 0.00 35.59 4.20
3081 3160 0.900647 ACTCTTCACCAGACGGAGGG 60.901 60.000 0.00 0.00 35.59 4.30
3082 3161 0.244994 CACTCTTCACCAGACGGAGG 59.755 60.000 0.00 0.00 35.59 4.30
3083 3162 1.248486 TCACTCTTCACCAGACGGAG 58.752 55.000 0.00 0.00 35.59 4.63
3084 3163 1.340248 GTTCACTCTTCACCAGACGGA 59.660 52.381 0.00 0.00 35.59 4.69
3085 3164 1.068588 TGTTCACTCTTCACCAGACGG 59.931 52.381 0.00 0.00 38.77 4.79
3086 3165 2.509052 TGTTCACTCTTCACCAGACG 57.491 50.000 0.00 0.00 0.00 4.18
3087 3166 4.264460 AGATGTTCACTCTTCACCAGAC 57.736 45.455 0.00 0.00 0.00 3.51
3088 3167 5.325239 TCTAGATGTTCACTCTTCACCAGA 58.675 41.667 0.00 0.00 0.00 3.86
3089 3168 5.417266 TCTCTAGATGTTCACTCTTCACCAG 59.583 44.000 0.00 0.00 0.00 4.00
3090 3169 5.325239 TCTCTAGATGTTCACTCTTCACCA 58.675 41.667 0.00 0.00 0.00 4.17
3091 3170 5.906113 TCTCTAGATGTTCACTCTTCACC 57.094 43.478 0.00 0.00 0.00 4.02
3092 3171 8.770438 AAAATCTCTAGATGTTCACTCTTCAC 57.230 34.615 0.00 0.00 34.49 3.18
3094 3173 9.528018 CCTAAAATCTCTAGATGTTCACTCTTC 57.472 37.037 0.00 0.00 34.12 2.87
3095 3174 9.261035 TCCTAAAATCTCTAGATGTTCACTCTT 57.739 33.333 0.00 0.00 34.12 2.85
3096 3175 8.691797 GTCCTAAAATCTCTAGATGTTCACTCT 58.308 37.037 0.00 0.00 34.12 3.24
3097 3176 8.470805 TGTCCTAAAATCTCTAGATGTTCACTC 58.529 37.037 0.00 0.00 34.12 3.51
3098 3177 8.367660 TGTCCTAAAATCTCTAGATGTTCACT 57.632 34.615 0.00 0.00 34.12 3.41
3099 3178 9.436957 TTTGTCCTAAAATCTCTAGATGTTCAC 57.563 33.333 0.00 0.00 34.12 3.18
3109 3188 9.401058 CACTCCATAATTTGTCCTAAAATCTCT 57.599 33.333 0.00 0.00 0.00 3.10
3110 3189 9.396022 TCACTCCATAATTTGTCCTAAAATCTC 57.604 33.333 0.00 0.00 0.00 2.75
3111 3190 9.753674 TTCACTCCATAATTTGTCCTAAAATCT 57.246 29.630 0.00 0.00 0.00 2.40
3113 3192 9.533831 ACTTCACTCCATAATTTGTCCTAAAAT 57.466 29.630 0.00 0.00 0.00 1.82
3114 3193 8.934023 ACTTCACTCCATAATTTGTCCTAAAA 57.066 30.769 0.00 0.00 0.00 1.52
3118 3197 8.934023 TTTTACTTCACTCCATAATTTGTCCT 57.066 30.769 0.00 0.00 0.00 3.85
3184 3263 6.816640 AGATGATGACTTGCATTTTTCCAATG 59.183 34.615 0.00 0.00 37.34 2.82
3185 3264 6.942976 AGATGATGACTTGCATTTTTCCAAT 58.057 32.000 0.00 0.00 37.34 3.16
3186 3265 6.209986 AGAGATGATGACTTGCATTTTTCCAA 59.790 34.615 0.00 0.00 37.34 3.53
3187 3266 5.713389 AGAGATGATGACTTGCATTTTTCCA 59.287 36.000 0.00 0.00 37.34 3.53
3188 3267 6.205101 AGAGATGATGACTTGCATTTTTCC 57.795 37.500 0.00 0.00 37.34 3.13
3189 3268 6.264088 GGAGAGATGATGACTTGCATTTTTC 58.736 40.000 0.00 0.00 37.34 2.29
3190 3269 5.126707 GGGAGAGATGATGACTTGCATTTTT 59.873 40.000 0.00 0.00 37.34 1.94
3191 3270 4.643784 GGGAGAGATGATGACTTGCATTTT 59.356 41.667 0.00 0.00 37.34 1.82
3192 3271 4.205587 GGGAGAGATGATGACTTGCATTT 58.794 43.478 0.00 0.00 37.34 2.32
3193 3272 3.434739 GGGGAGAGATGATGACTTGCATT 60.435 47.826 0.00 0.00 37.34 3.56
3194 3273 2.106166 GGGGAGAGATGATGACTTGCAT 59.894 50.000 0.00 0.00 40.77 3.96
3195 3274 1.487976 GGGGAGAGATGATGACTTGCA 59.512 52.381 0.00 0.00 0.00 4.08
3196 3275 1.767681 AGGGGAGAGATGATGACTTGC 59.232 52.381 0.00 0.00 0.00 4.01
3197 3276 3.307506 AGAGGGGAGAGATGATGACTTG 58.692 50.000 0.00 0.00 0.00 3.16
3198 3277 3.704545 AGAGGGGAGAGATGATGACTT 57.295 47.619 0.00 0.00 0.00 3.01
3199 3278 3.704545 AAGAGGGGAGAGATGATGACT 57.295 47.619 0.00 0.00 0.00 3.41
3200 3279 5.878406 TTAAAGAGGGGAGAGATGATGAC 57.122 43.478 0.00 0.00 0.00 3.06
3201 3280 8.432805 GTTAATTAAAGAGGGGAGAGATGATGA 58.567 37.037 0.00 0.00 0.00 2.92
3202 3281 7.663493 GGTTAATTAAAGAGGGGAGAGATGATG 59.337 40.741 0.00 0.00 0.00 3.07
3203 3282 7.350921 TGGTTAATTAAAGAGGGGAGAGATGAT 59.649 37.037 0.00 0.00 0.00 2.45
3204 3283 6.676632 TGGTTAATTAAAGAGGGGAGAGATGA 59.323 38.462 0.00 0.00 0.00 2.92
3205 3284 6.900194 TGGTTAATTAAAGAGGGGAGAGATG 58.100 40.000 0.00 0.00 0.00 2.90
3206 3285 7.184753 AGTTGGTTAATTAAAGAGGGGAGAGAT 59.815 37.037 0.00 0.00 0.00 2.75
3207 3286 6.504279 AGTTGGTTAATTAAAGAGGGGAGAGA 59.496 38.462 0.00 0.00 0.00 3.10
3208 3287 6.722328 AGTTGGTTAATTAAAGAGGGGAGAG 58.278 40.000 0.00 0.00 0.00 3.20
3209 3288 6.713731 AGTTGGTTAATTAAAGAGGGGAGA 57.286 37.500 0.00 0.00 0.00 3.71
3210 3289 6.377429 GGAAGTTGGTTAATTAAAGAGGGGAG 59.623 42.308 0.00 0.00 0.00 4.30
3211 3290 6.183361 TGGAAGTTGGTTAATTAAAGAGGGGA 60.183 38.462 0.00 0.00 0.00 4.81
3212 3291 6.014012 TGGAAGTTGGTTAATTAAAGAGGGG 58.986 40.000 0.00 0.00 0.00 4.79
3213 3292 7.533289 TTGGAAGTTGGTTAATTAAAGAGGG 57.467 36.000 0.00 0.00 0.00 4.30
3214 3293 8.802267 TCATTGGAAGTTGGTTAATTAAAGAGG 58.198 33.333 0.00 0.00 0.00 3.69
3215 3294 9.846248 CTCATTGGAAGTTGGTTAATTAAAGAG 57.154 33.333 0.00 0.00 0.00 2.85
3216 3295 8.303876 GCTCATTGGAAGTTGGTTAATTAAAGA 58.696 33.333 0.00 0.00 0.00 2.52
3217 3296 8.306761 AGCTCATTGGAAGTTGGTTAATTAAAG 58.693 33.333 0.00 0.00 0.00 1.85
3218 3297 8.189119 AGCTCATTGGAAGTTGGTTAATTAAA 57.811 30.769 0.00 0.00 0.00 1.52
3219 3298 7.775053 AGCTCATTGGAAGTTGGTTAATTAA 57.225 32.000 0.00 0.00 0.00 1.40
3220 3299 8.871629 TTAGCTCATTGGAAGTTGGTTAATTA 57.128 30.769 0.00 0.00 0.00 1.40
3221 3300 7.577616 GCTTAGCTCATTGGAAGTTGGTTAATT 60.578 37.037 0.00 0.00 0.00 1.40
3222 3301 6.127619 GCTTAGCTCATTGGAAGTTGGTTAAT 60.128 38.462 0.00 0.00 0.00 1.40
3223 3302 5.183140 GCTTAGCTCATTGGAAGTTGGTTAA 59.817 40.000 0.00 0.00 0.00 2.01
3224 3303 4.700213 GCTTAGCTCATTGGAAGTTGGTTA 59.300 41.667 0.00 0.00 0.00 2.85
3225 3304 3.507622 GCTTAGCTCATTGGAAGTTGGTT 59.492 43.478 0.00 0.00 0.00 3.67
3226 3305 3.084786 GCTTAGCTCATTGGAAGTTGGT 58.915 45.455 0.00 0.00 0.00 3.67
3227 3306 2.096496 CGCTTAGCTCATTGGAAGTTGG 59.904 50.000 1.76 0.00 0.00 3.77
3228 3307 2.476854 GCGCTTAGCTCATTGGAAGTTG 60.477 50.000 0.00 0.00 44.04 3.16
3229 3308 1.740025 GCGCTTAGCTCATTGGAAGTT 59.260 47.619 0.00 0.00 44.04 2.66
3230 3309 1.373570 GCGCTTAGCTCATTGGAAGT 58.626 50.000 0.00 0.00 44.04 3.01
3242 3321 9.000018 GTCTTCTTAATTTTTACATGCGCTTAG 58.000 33.333 9.73 0.08 0.00 2.18
3243 3322 8.508062 TGTCTTCTTAATTTTTACATGCGCTTA 58.492 29.630 9.73 0.00 0.00 3.09
3244 3323 7.367285 TGTCTTCTTAATTTTTACATGCGCTT 58.633 30.769 9.73 0.00 0.00 4.68
3245 3324 6.908825 TGTCTTCTTAATTTTTACATGCGCT 58.091 32.000 9.73 0.00 0.00 5.92
3246 3325 7.561237 TTGTCTTCTTAATTTTTACATGCGC 57.439 32.000 0.00 0.00 0.00 6.09
3247 3326 9.128107 ACATTGTCTTCTTAATTTTTACATGCG 57.872 29.630 0.00 0.00 0.00 4.73
3255 3334 9.899226 GAAGCTACACATTGTCTTCTTAATTTT 57.101 29.630 8.12 0.00 32.01 1.82
3256 3335 9.289782 AGAAGCTACACATTGTCTTCTTAATTT 57.710 29.630 10.95 0.00 37.93 1.82
3257 3336 8.854614 AGAAGCTACACATTGTCTTCTTAATT 57.145 30.769 10.95 0.00 37.93 1.40
3258 3337 8.854614 AAGAAGCTACACATTGTCTTCTTAAT 57.145 30.769 20.91 6.29 43.58 1.40
3259 3338 9.944376 ATAAGAAGCTACACATTGTCTTCTTAA 57.056 29.630 26.03 17.04 45.84 1.85
3260 3339 9.944376 AATAAGAAGCTACACATTGTCTTCTTA 57.056 29.630 25.24 25.24 46.24 2.10
3261 3340 8.725148 CAATAAGAAGCTACACATTGTCTTCTT 58.275 33.333 23.58 23.58 45.43 2.52
3262 3341 7.335422 CCAATAAGAAGCTACACATTGTCTTCT 59.665 37.037 10.95 10.95 40.84 2.85
3263 3342 7.119846 ACCAATAAGAAGCTACACATTGTCTTC 59.880 37.037 7.53 7.53 33.76 2.87
3264 3343 6.942576 ACCAATAAGAAGCTACACATTGTCTT 59.057 34.615 0.00 0.00 0.00 3.01
3265 3344 6.476378 ACCAATAAGAAGCTACACATTGTCT 58.524 36.000 0.00 0.00 0.00 3.41
3266 3345 6.595716 AGACCAATAAGAAGCTACACATTGTC 59.404 38.462 0.00 0.00 0.00 3.18
3267 3346 6.476378 AGACCAATAAGAAGCTACACATTGT 58.524 36.000 0.00 0.00 0.00 2.71
3268 3347 6.992063 AGACCAATAAGAAGCTACACATTG 57.008 37.500 0.00 0.00 0.00 2.82
3269 3348 7.168219 TCAAGACCAATAAGAAGCTACACATT 58.832 34.615 0.00 0.00 0.00 2.71
3270 3349 6.711277 TCAAGACCAATAAGAAGCTACACAT 58.289 36.000 0.00 0.00 0.00 3.21
3271 3350 6.109156 TCAAGACCAATAAGAAGCTACACA 57.891 37.500 0.00 0.00 0.00 3.72
3272 3351 7.617041 AATCAAGACCAATAAGAAGCTACAC 57.383 36.000 0.00 0.00 0.00 2.90
3273 3352 7.769044 GGTAATCAAGACCAATAAGAAGCTACA 59.231 37.037 0.00 0.00 36.91 2.74
3274 3353 7.042658 CGGTAATCAAGACCAATAAGAAGCTAC 60.043 40.741 0.00 0.00 36.72 3.58
3275 3354 6.984474 CGGTAATCAAGACCAATAAGAAGCTA 59.016 38.462 0.00 0.00 36.72 3.32
3276 3355 5.817816 CGGTAATCAAGACCAATAAGAAGCT 59.182 40.000 0.00 0.00 36.72 3.74
3277 3356 5.585047 ACGGTAATCAAGACCAATAAGAAGC 59.415 40.000 0.00 0.00 36.72 3.86
3278 3357 6.594159 ACACGGTAATCAAGACCAATAAGAAG 59.406 38.462 0.00 0.00 36.72 2.85
3279 3358 6.370442 CACACGGTAATCAAGACCAATAAGAA 59.630 38.462 0.00 0.00 36.72 2.52
3280 3359 5.872617 CACACGGTAATCAAGACCAATAAGA 59.127 40.000 0.00 0.00 36.72 2.10
3281 3360 5.872617 TCACACGGTAATCAAGACCAATAAG 59.127 40.000 0.00 0.00 36.72 1.73
3282 3361 5.795972 TCACACGGTAATCAAGACCAATAA 58.204 37.500 0.00 0.00 36.72 1.40
3283 3362 5.408880 TCACACGGTAATCAAGACCAATA 57.591 39.130 0.00 0.00 36.72 1.90
3284 3363 4.280436 TCACACGGTAATCAAGACCAAT 57.720 40.909 0.00 0.00 36.72 3.16
3285 3364 3.755112 TCACACGGTAATCAAGACCAA 57.245 42.857 0.00 0.00 36.72 3.67
3286 3365 3.259625 TCATCACACGGTAATCAAGACCA 59.740 43.478 0.00 0.00 36.72 4.02
3287 3366 3.857052 TCATCACACGGTAATCAAGACC 58.143 45.455 0.00 0.00 0.00 3.85
3288 3367 4.744570 TCTCATCACACGGTAATCAAGAC 58.255 43.478 0.00 0.00 0.00 3.01
3289 3368 4.705023 TCTCTCATCACACGGTAATCAAGA 59.295 41.667 0.00 0.00 0.00 3.02
3290 3369 4.998788 TCTCTCATCACACGGTAATCAAG 58.001 43.478 0.00 0.00 0.00 3.02
3291 3370 4.705023 TCTCTCTCATCACACGGTAATCAA 59.295 41.667 0.00 0.00 0.00 2.57
3292 3371 4.270008 TCTCTCTCATCACACGGTAATCA 58.730 43.478 0.00 0.00 0.00 2.57
3293 3372 4.902443 TCTCTCTCATCACACGGTAATC 57.098 45.455 0.00 0.00 0.00 1.75
3294 3373 4.707448 ACTTCTCTCTCATCACACGGTAAT 59.293 41.667 0.00 0.00 0.00 1.89
3295 3374 4.079970 ACTTCTCTCTCATCACACGGTAA 58.920 43.478 0.00 0.00 0.00 2.85
3296 3375 3.687125 ACTTCTCTCTCATCACACGGTA 58.313 45.455 0.00 0.00 0.00 4.02
3297 3376 2.520069 ACTTCTCTCTCATCACACGGT 58.480 47.619 0.00 0.00 0.00 4.83
3298 3377 4.909696 ATACTTCTCTCTCATCACACGG 57.090 45.455 0.00 0.00 0.00 4.94
3299 3378 7.588143 AAAAATACTTCTCTCTCATCACACG 57.412 36.000 0.00 0.00 0.00 4.49
3365 3444 7.095187 ACGTTTGGCTTTAAAATTTGTTCACAA 60.095 29.630 0.00 0.00 0.00 3.33
3366 3445 6.369065 ACGTTTGGCTTTAAAATTTGTTCACA 59.631 30.769 0.00 0.00 0.00 3.58
3367 3446 6.767080 ACGTTTGGCTTTAAAATTTGTTCAC 58.233 32.000 0.00 0.00 0.00 3.18
3368 3447 6.969828 ACGTTTGGCTTTAAAATTTGTTCA 57.030 29.167 0.00 0.00 0.00 3.18
3369 3448 7.424167 GTGAACGTTTGGCTTTAAAATTTGTTC 59.576 33.333 0.46 0.00 32.52 3.18
3370 3449 7.118535 AGTGAACGTTTGGCTTTAAAATTTGTT 59.881 29.630 0.46 0.00 0.00 2.83
3371 3450 6.592220 AGTGAACGTTTGGCTTTAAAATTTGT 59.408 30.769 0.46 0.00 0.00 2.83
3372 3451 6.999456 AGTGAACGTTTGGCTTTAAAATTTG 58.001 32.000 0.46 0.00 0.00 2.32
3373 3452 7.039270 AGAGTGAACGTTTGGCTTTAAAATTT 58.961 30.769 0.46 0.00 0.00 1.82
3374 3453 6.569780 AGAGTGAACGTTTGGCTTTAAAATT 58.430 32.000 0.46 0.00 0.00 1.82
3375 3454 6.144078 AGAGTGAACGTTTGGCTTTAAAAT 57.856 33.333 0.46 0.00 0.00 1.82
3376 3455 5.570234 AGAGTGAACGTTTGGCTTTAAAA 57.430 34.783 0.46 0.00 0.00 1.52
3377 3456 5.570234 AAGAGTGAACGTTTGGCTTTAAA 57.430 34.783 0.46 0.00 0.00 1.52
3378 3457 5.570234 AAAGAGTGAACGTTTGGCTTTAA 57.430 34.783 0.46 0.00 0.00 1.52
3379 3458 5.007921 GGTAAAGAGTGAACGTTTGGCTTTA 59.992 40.000 0.46 11.39 0.00 1.85
3380 3459 4.201980 GGTAAAGAGTGAACGTTTGGCTTT 60.202 41.667 0.46 12.31 0.00 3.51
3381 3460 3.314357 GGTAAAGAGTGAACGTTTGGCTT 59.686 43.478 0.46 1.61 0.00 4.35
3382 3461 2.876550 GGTAAAGAGTGAACGTTTGGCT 59.123 45.455 0.46 0.71 0.00 4.75
3383 3462 2.349155 CGGTAAAGAGTGAACGTTTGGC 60.349 50.000 0.46 0.00 0.00 4.52
3384 3463 2.222445 CCGGTAAAGAGTGAACGTTTGG 59.778 50.000 0.46 0.00 0.00 3.28
3385 3464 3.060070 GTCCGGTAAAGAGTGAACGTTTG 60.060 47.826 0.46 0.00 0.00 2.93
3386 3465 3.126073 GTCCGGTAAAGAGTGAACGTTT 58.874 45.455 0.46 0.00 0.00 3.60
3387 3466 2.747436 GTCCGGTAAAGAGTGAACGTT 58.253 47.619 0.00 0.00 0.00 3.99
3388 3467 1.335324 CGTCCGGTAAAGAGTGAACGT 60.335 52.381 0.00 0.00 0.00 3.99
3389 3468 1.334054 CGTCCGGTAAAGAGTGAACG 58.666 55.000 0.00 0.00 0.00 3.95
3390 3469 1.270550 TCCGTCCGGTAAAGAGTGAAC 59.729 52.381 0.00 0.00 36.47 3.18
3391 3470 1.542915 CTCCGTCCGGTAAAGAGTGAA 59.457 52.381 0.00 0.00 36.47 3.18
3392 3471 1.171308 CTCCGTCCGGTAAAGAGTGA 58.829 55.000 0.00 0.00 36.47 3.41
3393 3472 0.172803 CCTCCGTCCGGTAAAGAGTG 59.827 60.000 0.00 0.00 36.47 3.51
3394 3473 0.969409 CCCTCCGTCCGGTAAAGAGT 60.969 60.000 0.00 0.00 36.47 3.24
3395 3474 0.682209 TCCCTCCGTCCGGTAAAGAG 60.682 60.000 0.00 3.95 36.47 2.85
3396 3475 0.682209 CTCCCTCCGTCCGGTAAAGA 60.682 60.000 0.00 0.00 36.47 2.52
3397 3476 0.969409 ACTCCCTCCGTCCGGTAAAG 60.969 60.000 0.00 2.74 36.47 1.85
3398 3477 0.331278 TACTCCCTCCGTCCGGTAAA 59.669 55.000 0.00 0.00 36.47 2.01
3399 3478 0.552848 ATACTCCCTCCGTCCGGTAA 59.447 55.000 0.00 0.00 36.47 2.85
3400 3479 1.072331 GTATACTCCCTCCGTCCGGTA 59.928 57.143 0.00 0.00 36.47 4.02
3401 3480 0.179006 GTATACTCCCTCCGTCCGGT 60.179 60.000 0.00 0.00 36.47 5.28
3402 3481 0.179009 TGTATACTCCCTCCGTCCGG 60.179 60.000 4.17 0.00 0.00 5.14
3403 3482 0.950116 GTGTATACTCCCTCCGTCCG 59.050 60.000 4.17 0.00 0.00 4.79
3404 3483 2.361643 AGTGTATACTCCCTCCGTCC 57.638 55.000 4.17 0.00 28.79 4.79
3405 3484 3.698040 TGAAAGTGTATACTCCCTCCGTC 59.302 47.826 4.17 0.00 35.69 4.79
3406 3485 3.700038 CTGAAAGTGTATACTCCCTCCGT 59.300 47.826 4.17 0.00 35.69 4.69
3407 3486 3.068307 CCTGAAAGTGTATACTCCCTCCG 59.932 52.174 4.17 0.00 35.69 4.63
3408 3487 4.099727 GTCCTGAAAGTGTATACTCCCTCC 59.900 50.000 4.17 0.00 35.69 4.30
3409 3488 4.202030 CGTCCTGAAAGTGTATACTCCCTC 60.202 50.000 4.17 1.34 35.69 4.30
3410 3489 3.700038 CGTCCTGAAAGTGTATACTCCCT 59.300 47.826 4.17 0.00 35.69 4.20
3411 3490 3.737355 GCGTCCTGAAAGTGTATACTCCC 60.737 52.174 4.17 0.00 35.69 4.30
3412 3491 3.445857 GCGTCCTGAAAGTGTATACTCC 58.554 50.000 4.17 0.00 35.69 3.85
3413 3492 3.130693 AGGCGTCCTGAAAGTGTATACTC 59.869 47.826 4.17 0.09 30.95 2.59
3422 3501 1.067776 ACGAACTAGGCGTCCTGAAAG 60.068 52.381 7.04 1.62 37.42 2.62
3427 3506 0.526662 CTGAACGAACTAGGCGTCCT 59.473 55.000 12.35 3.87 41.75 3.85
3546 3625 3.181407 ACAAGGAAGTGGGGAAATGGAAT 60.181 43.478 0.00 0.00 0.00 3.01
3548 3627 1.786441 ACAAGGAAGTGGGGAAATGGA 59.214 47.619 0.00 0.00 0.00 3.41
3550 3629 3.640967 TCAAACAAGGAAGTGGGGAAATG 59.359 43.478 0.00 0.00 0.00 2.32
3551 3630 3.922375 TCAAACAAGGAAGTGGGGAAAT 58.078 40.909 0.00 0.00 0.00 2.17
3559 3638 6.200878 TCTAGGGATTTCAAACAAGGAAGT 57.799 37.500 0.00 0.00 0.00 3.01
3560 3639 7.709149 ATTCTAGGGATTTCAAACAAGGAAG 57.291 36.000 0.00 0.00 0.00 3.46
3561 3640 9.020731 GTAATTCTAGGGATTTCAAACAAGGAA 57.979 33.333 0.00 0.00 0.00 3.36
3563 3642 7.396055 TGGTAATTCTAGGGATTTCAAACAAGG 59.604 37.037 0.00 0.00 0.00 3.61
3564 3643 8.348285 TGGTAATTCTAGGGATTTCAAACAAG 57.652 34.615 0.00 0.00 0.00 3.16
3570 3653 6.329197 CCCTACTGGTAATTCTAGGGATTTCA 59.671 42.308 2.83 0.00 46.10 2.69
3591 3674 3.117888 GCTCCCAAATTCAGATCACCCTA 60.118 47.826 0.00 0.00 0.00 3.53
3603 3686 5.750352 ATTCTCAATTGTGCTCCCAAATT 57.250 34.783 5.13 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.