Multiple sequence alignment - TraesCS1A01G111200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G111200 chr1A 100.000 2884 0 0 1 2884 112030174 112027291 0.000000e+00 5326.0
1 TraesCS1A01G111200 chr1A 81.752 137 16 9 42 173 368829428 368829296 3.930000e-19 106.0
2 TraesCS1A01G111200 chr1D 92.769 1936 55 21 353 2236 108821832 108819930 0.000000e+00 2721.0
3 TraesCS1A01G111200 chr1D 96.875 32 1 0 1096 1127 263869263 263869232 1.000000e-03 54.7
4 TraesCS1A01G111200 chr1B 90.623 1877 71 33 372 2193 164420511 164418685 0.000000e+00 2394.0
5 TraesCS1A01G111200 chr1B 80.952 168 21 9 42 202 397451609 397451446 3.900000e-24 122.0
6 TraesCS1A01G111200 chr1B 84.091 88 12 2 88 173 43324807 43324720 1.840000e-12 84.2
7 TraesCS1A01G111200 chr3B 94.624 186 9 1 2699 2884 124629207 124629391 1.310000e-73 287.0
8 TraesCS1A01G111200 chr3B 82.222 135 18 6 42 173 663978081 663978212 8.450000e-21 111.0
9 TraesCS1A01G111200 chr7A 94.565 184 7 3 2702 2884 133812007 133812188 6.080000e-72 281.0
10 TraesCS1A01G111200 chr7A 95.495 111 5 0 2587 2697 133811352 133811462 8.210000e-41 178.0
11 TraesCS1A01G111200 chr7A 92.793 111 4 1 2587 2697 133811684 133811790 1.070000e-34 158.0
12 TraesCS1A01G111200 chr7A 76.632 291 49 16 954 1237 89910967 89910689 3.000000e-30 143.0
13 TraesCS1A01G111200 chr7A 96.825 63 2 0 2452 2514 133811151 133811213 3.930000e-19 106.0
14 TraesCS1A01G111200 chr6B 93.514 185 11 1 2699 2883 669949808 669949991 1.020000e-69 274.0
15 TraesCS1A01G111200 chr6B 94.595 111 6 0 2587 2697 669949648 669949758 3.820000e-39 172.0
16 TraesCS1A01G111200 chr6B 82.836 134 19 1 2452 2581 152326211 152326344 1.820000e-22 117.0
17 TraesCS1A01G111200 chr6B 95.455 66 3 0 2452 2517 170327800 170327735 3.930000e-19 106.0
18 TraesCS1A01G111200 chr6B 81.034 116 16 6 60 172 469288324 469288212 1.420000e-13 87.9
19 TraesCS1A01G111200 chr2B 91.935 186 14 1 2699 2884 63015015 63015199 2.850000e-65 259.0
20 TraesCS1A01G111200 chr2B 95.536 112 4 1 2587 2697 63014690 63014801 8.210000e-41 178.0
21 TraesCS1A01G111200 chr2B 90.278 72 7 0 2443 2514 137704328 137704399 8.510000e-16 95.3
22 TraesCS1A01G111200 chr5B 94.595 111 6 0 2587 2697 37829974 37829864 3.820000e-39 172.0
23 TraesCS1A01G111200 chr5B 81.148 122 18 5 54 173 241402393 241402275 3.060000e-15 93.5
24 TraesCS1A01G111200 chr4B 92.793 111 8 0 2587 2697 226200849 226200959 8.270000e-36 161.0
25 TraesCS1A01G111200 chr7D 90.000 120 10 2 2587 2705 569724427 569724309 1.380000e-33 154.0
26 TraesCS1A01G111200 chr7D 91.071 112 8 2 2587 2697 13818078 13818188 1.790000e-32 150.0
27 TraesCS1A01G111200 chr7D 95.238 63 3 0 2452 2514 370794401 370794463 1.830000e-17 100.0
28 TraesCS1A01G111200 chr4D 89.286 112 11 1 2587 2697 189511358 189511469 3.870000e-29 139.0
29 TraesCS1A01G111200 chr4D 89.062 64 7 0 2517 2580 413064781 413064844 2.380000e-11 80.5
30 TraesCS1A01G111200 chr7B 77.523 218 44 5 948 1165 38611595 38611383 3.020000e-25 126.0
31 TraesCS1A01G111200 chr2A 83.108 148 9 4 2452 2583 108315019 108314872 1.400000e-23 121.0
32 TraesCS1A01G111200 chr2A 92.857 70 4 1 2451 2519 94945868 94945799 1.830000e-17 100.0
33 TraesCS1A01G111200 chr2A 78.195 133 23 6 42 171 650624024 650623895 2.380000e-11 80.5
34 TraesCS1A01G111200 chr4A 84.328 134 5 6 994 1127 30157113 30156996 1.820000e-22 117.0
35 TraesCS1A01G111200 chr6D 82.432 148 9 2 2452 2582 133894618 133894471 2.350000e-21 113.0
36 TraesCS1A01G111200 chr5D 81.879 149 10 4 2452 2583 397487521 397487373 3.040000e-20 110.0
37 TraesCS1A01G111200 chr3A 80.147 136 20 7 42 173 46168415 46168283 8.510000e-16 95.3
38 TraesCS1A01G111200 chr3D 78.519 135 24 5 42 173 33382649 33382517 1.840000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G111200 chr1A 112027291 112030174 2883 True 5326.0 5326 100.0000 1 2884 1 chr1A.!!$R1 2883
1 TraesCS1A01G111200 chr1D 108819930 108821832 1902 True 2721.0 2721 92.7690 353 2236 1 chr1D.!!$R1 1883
2 TraesCS1A01G111200 chr1B 164418685 164420511 1826 True 2394.0 2394 90.6230 372 2193 1 chr1B.!!$R2 1821
3 TraesCS1A01G111200 chr2B 63014690 63015199 509 False 218.5 259 93.7355 2587 2884 2 chr2B.!!$F2 297

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
223 224 0.036732 GTGACATGCCTCCTGGTGAA 59.963 55.0 0.0 0.0 35.27 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1973 2035 0.38423 ATTTGTTGCAACGCGACTCG 60.384 50.0 23.79 0.0 42.88 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 9.528489 AATAATACTCAAAATTGTGTACCCACT 57.472 29.630 9.49 0.00 42.34 4.00
36 37 7.833285 AATACTCAAAATTGTGTACCCACTT 57.167 32.000 9.49 0.00 42.34 3.16
37 38 8.927675 AATACTCAAAATTGTGTACCCACTTA 57.072 30.769 9.49 0.00 42.34 2.24
38 39 6.628919 ACTCAAAATTGTGTACCCACTTAC 57.371 37.500 0.00 0.00 42.34 2.34
39 40 6.362248 ACTCAAAATTGTGTACCCACTTACT 58.638 36.000 0.00 0.00 42.34 2.24
40 41 6.485648 ACTCAAAATTGTGTACCCACTTACTC 59.514 38.462 0.00 0.00 42.34 2.59
41 42 5.467399 TCAAAATTGTGTACCCACTTACTCG 59.533 40.000 0.00 0.00 42.34 4.18
42 43 3.604875 ATTGTGTACCCACTTACTCGG 57.395 47.619 0.00 0.00 42.34 4.63
43 44 0.604578 TGTGTACCCACTTACTCGGC 59.395 55.000 0.00 0.00 42.34 5.54
44 45 0.604578 GTGTACCCACTTACTCGGCA 59.395 55.000 0.00 0.00 38.61 5.69
45 46 1.001181 GTGTACCCACTTACTCGGCAA 59.999 52.381 0.00 0.00 38.61 4.52
46 47 1.693062 TGTACCCACTTACTCGGCAAA 59.307 47.619 0.00 0.00 0.00 3.68
47 48 2.104451 TGTACCCACTTACTCGGCAAAA 59.896 45.455 0.00 0.00 0.00 2.44
48 49 1.601166 ACCCACTTACTCGGCAAAAC 58.399 50.000 0.00 0.00 0.00 2.43
49 50 1.134037 ACCCACTTACTCGGCAAAACA 60.134 47.619 0.00 0.00 0.00 2.83
50 51 1.950909 CCCACTTACTCGGCAAAACAA 59.049 47.619 0.00 0.00 0.00 2.83
51 52 2.359531 CCCACTTACTCGGCAAAACAAA 59.640 45.455 0.00 0.00 0.00 2.83
52 53 3.368495 CCACTTACTCGGCAAAACAAAC 58.632 45.455 0.00 0.00 0.00 2.93
53 54 3.066203 CCACTTACTCGGCAAAACAAACT 59.934 43.478 0.00 0.00 0.00 2.66
54 55 4.439563 CCACTTACTCGGCAAAACAAACTT 60.440 41.667 0.00 0.00 0.00 2.66
55 56 5.099575 CACTTACTCGGCAAAACAAACTTT 58.900 37.500 0.00 0.00 0.00 2.66
56 57 5.575218 CACTTACTCGGCAAAACAAACTTTT 59.425 36.000 0.00 0.00 0.00 2.27
57 58 6.090223 CACTTACTCGGCAAAACAAACTTTTT 59.910 34.615 0.00 0.00 0.00 1.94
78 79 4.466567 TTATGGCAATTTAGATGTCGCG 57.533 40.909 0.00 0.00 0.00 5.87
79 80 2.017138 TGGCAATTTAGATGTCGCGA 57.983 45.000 3.71 3.71 0.00 5.87
80 81 1.933181 TGGCAATTTAGATGTCGCGAG 59.067 47.619 10.24 0.00 0.00 5.03
81 82 2.201732 GGCAATTTAGATGTCGCGAGA 58.798 47.619 10.24 9.54 38.16 4.04
82 83 2.607635 GGCAATTTAGATGTCGCGAGAA 59.392 45.455 10.24 0.02 45.01 2.87
83 84 3.248602 GGCAATTTAGATGTCGCGAGAAT 59.751 43.478 10.24 6.47 45.01 2.40
84 85 4.447724 GGCAATTTAGATGTCGCGAGAATA 59.552 41.667 10.24 2.86 45.01 1.75
85 86 5.050363 GGCAATTTAGATGTCGCGAGAATAA 60.050 40.000 10.24 9.65 45.01 1.40
86 87 6.418956 GCAATTTAGATGTCGCGAGAATAAA 58.581 36.000 21.22 21.22 45.01 1.40
87 88 6.354622 GCAATTTAGATGTCGCGAGAATAAAC 59.645 38.462 21.32 6.97 45.01 2.01
88 89 7.398746 CAATTTAGATGTCGCGAGAATAAACA 58.601 34.615 21.32 11.79 45.01 2.83
89 90 6.954616 TTTAGATGTCGCGAGAATAAACAA 57.045 33.333 10.24 0.00 45.01 2.83
90 91 6.954616 TTAGATGTCGCGAGAATAAACAAA 57.045 33.333 10.24 0.00 45.01 2.83
91 92 7.534085 TTAGATGTCGCGAGAATAAACAAAT 57.466 32.000 10.24 0.00 45.01 2.32
92 93 6.422776 AGATGTCGCGAGAATAAACAAATT 57.577 33.333 10.24 0.00 45.01 1.82
93 94 6.842163 AGATGTCGCGAGAATAAACAAATTT 58.158 32.000 10.24 0.00 45.01 1.82
94 95 7.970384 AGATGTCGCGAGAATAAACAAATTTA 58.030 30.769 10.24 0.00 45.01 1.40
95 96 8.116753 AGATGTCGCGAGAATAAACAAATTTAG 58.883 33.333 10.24 0.00 45.01 1.85
96 97 7.124347 TGTCGCGAGAATAAACAAATTTAGT 57.876 32.000 10.24 0.00 45.01 2.24
97 98 7.577979 TGTCGCGAGAATAAACAAATTTAGTT 58.422 30.769 10.24 0.00 45.01 2.24
98 99 8.710551 TGTCGCGAGAATAAACAAATTTAGTTA 58.289 29.630 10.24 2.11 45.01 2.24
99 100 9.195831 GTCGCGAGAATAAACAAATTTAGTTAG 57.804 33.333 10.24 0.00 45.01 2.34
100 101 7.901377 TCGCGAGAATAAACAAATTTAGTTAGC 59.099 33.333 3.71 1.26 37.03 3.09
101 102 7.690637 CGCGAGAATAAACAAATTTAGTTAGCA 59.309 33.333 0.00 0.00 33.78 3.49
102 103 9.337091 GCGAGAATAAACAAATTTAGTTAGCAA 57.663 29.630 6.48 0.00 33.78 3.91
105 106 9.639601 AGAATAAACAAATTTAGTTAGCAAGCC 57.360 29.630 6.48 0.00 33.78 4.35
106 107 8.771920 AATAAACAAATTTAGTTAGCAAGCCC 57.228 30.769 6.48 0.00 33.78 5.19
107 108 4.434713 ACAAATTTAGTTAGCAAGCCCG 57.565 40.909 0.00 0.00 0.00 6.13
108 109 4.076394 ACAAATTTAGTTAGCAAGCCCGA 58.924 39.130 0.00 0.00 0.00 5.14
109 110 4.082949 ACAAATTTAGTTAGCAAGCCCGAC 60.083 41.667 0.00 0.00 0.00 4.79
110 111 2.843401 TTTAGTTAGCAAGCCCGACA 57.157 45.000 0.00 0.00 0.00 4.35
111 112 2.843401 TTAGTTAGCAAGCCCGACAA 57.157 45.000 0.00 0.00 0.00 3.18
112 113 2.843401 TAGTTAGCAAGCCCGACAAA 57.157 45.000 0.00 0.00 0.00 2.83
113 114 2.200373 AGTTAGCAAGCCCGACAAAT 57.800 45.000 0.00 0.00 0.00 2.32
114 115 2.084546 AGTTAGCAAGCCCGACAAATC 58.915 47.619 0.00 0.00 0.00 2.17
115 116 1.132453 GTTAGCAAGCCCGACAAATCC 59.868 52.381 0.00 0.00 0.00 3.01
116 117 0.618458 TAGCAAGCCCGACAAATCCT 59.382 50.000 0.00 0.00 0.00 3.24
117 118 0.962356 AGCAAGCCCGACAAATCCTG 60.962 55.000 0.00 0.00 0.00 3.86
118 119 0.960364 GCAAGCCCGACAAATCCTGA 60.960 55.000 0.00 0.00 0.00 3.86
119 120 0.804989 CAAGCCCGACAAATCCTGAC 59.195 55.000 0.00 0.00 0.00 3.51
120 121 0.400213 AAGCCCGACAAATCCTGACA 59.600 50.000 0.00 0.00 0.00 3.58
121 122 0.400213 AGCCCGACAAATCCTGACAA 59.600 50.000 0.00 0.00 0.00 3.18
122 123 1.202879 AGCCCGACAAATCCTGACAAA 60.203 47.619 0.00 0.00 0.00 2.83
123 124 1.611491 GCCCGACAAATCCTGACAAAA 59.389 47.619 0.00 0.00 0.00 2.44
124 125 2.035321 GCCCGACAAATCCTGACAAAAA 59.965 45.455 0.00 0.00 0.00 1.94
125 126 3.638484 CCCGACAAATCCTGACAAAAAC 58.362 45.455 0.00 0.00 0.00 2.43
126 127 3.067461 CCCGACAAATCCTGACAAAAACA 59.933 43.478 0.00 0.00 0.00 2.83
127 128 4.440802 CCCGACAAATCCTGACAAAAACAA 60.441 41.667 0.00 0.00 0.00 2.83
128 129 5.105752 CCGACAAATCCTGACAAAAACAAA 58.894 37.500 0.00 0.00 0.00 2.83
129 130 5.752955 CCGACAAATCCTGACAAAAACAAAT 59.247 36.000 0.00 0.00 0.00 2.32
130 131 6.920758 CCGACAAATCCTGACAAAAACAAATA 59.079 34.615 0.00 0.00 0.00 1.40
131 132 7.436673 CCGACAAATCCTGACAAAAACAAATAA 59.563 33.333 0.00 0.00 0.00 1.40
132 133 8.812329 CGACAAATCCTGACAAAAACAAATAAA 58.188 29.630 0.00 0.00 0.00 1.40
133 134 9.914923 GACAAATCCTGACAAAAACAAATAAAC 57.085 29.630 0.00 0.00 0.00 2.01
134 135 9.665719 ACAAATCCTGACAAAAACAAATAAACT 57.334 25.926 0.00 0.00 0.00 2.66
135 136 9.919348 CAAATCCTGACAAAAACAAATAAACTG 57.081 29.630 0.00 0.00 0.00 3.16
136 137 8.661352 AATCCTGACAAAAACAAATAAACTGG 57.339 30.769 0.00 0.00 0.00 4.00
137 138 7.411486 TCCTGACAAAAACAAATAAACTGGA 57.589 32.000 0.00 0.00 0.00 3.86
138 139 8.017418 TCCTGACAAAAACAAATAAACTGGAT 57.983 30.769 0.00 0.00 0.00 3.41
139 140 7.925483 TCCTGACAAAAACAAATAAACTGGATG 59.075 33.333 0.00 0.00 0.00 3.51
140 141 7.925483 CCTGACAAAAACAAATAAACTGGATGA 59.075 33.333 0.00 0.00 0.00 2.92
141 142 9.311916 CTGACAAAAACAAATAAACTGGATGAA 57.688 29.630 0.00 0.00 0.00 2.57
142 143 9.829507 TGACAAAAACAAATAAACTGGATGAAT 57.170 25.926 0.00 0.00 0.00 2.57
146 147 9.949174 AAAAACAAATAAACTGGATGAATTTGC 57.051 25.926 6.11 0.00 39.84 3.68
147 148 7.671495 AACAAATAAACTGGATGAATTTGCC 57.329 32.000 6.11 0.00 39.84 4.52
148 149 6.767456 ACAAATAAACTGGATGAATTTGCCA 58.233 32.000 6.11 0.00 39.84 4.92
149 150 7.396418 ACAAATAAACTGGATGAATTTGCCAT 58.604 30.769 6.11 0.00 39.84 4.40
150 151 7.334921 ACAAATAAACTGGATGAATTTGCCATG 59.665 33.333 6.11 0.00 39.84 3.66
151 152 2.973694 ACTGGATGAATTTGCCATGC 57.026 45.000 0.00 0.00 33.69 4.06
152 153 2.463752 ACTGGATGAATTTGCCATGCT 58.536 42.857 0.00 0.00 34.13 3.79
153 154 2.835764 ACTGGATGAATTTGCCATGCTT 59.164 40.909 0.00 0.00 34.13 3.91
154 155 3.194861 CTGGATGAATTTGCCATGCTTG 58.805 45.455 0.00 0.00 34.13 4.01
155 156 1.937899 GGATGAATTTGCCATGCTTGC 59.062 47.619 0.00 0.00 30.95 4.01
156 157 1.937899 GATGAATTTGCCATGCTTGCC 59.062 47.619 0.00 0.00 0.00 4.52
157 158 0.685660 TGAATTTGCCATGCTTGCCA 59.314 45.000 0.00 0.00 0.00 4.92
158 159 1.071857 TGAATTTGCCATGCTTGCCAA 59.928 42.857 0.00 0.00 0.00 4.52
159 160 1.465777 GAATTTGCCATGCTTGCCAAC 59.534 47.619 0.00 0.00 0.00 3.77
160 161 0.688487 ATTTGCCATGCTTGCCAACT 59.312 45.000 0.00 0.00 0.00 3.16
161 162 1.336131 TTTGCCATGCTTGCCAACTA 58.664 45.000 0.00 0.00 0.00 2.24
162 163 1.336131 TTGCCATGCTTGCCAACTAA 58.664 45.000 0.00 0.00 0.00 2.24
163 164 1.336131 TGCCATGCTTGCCAACTAAA 58.664 45.000 0.00 0.00 0.00 1.85
164 165 1.000731 TGCCATGCTTGCCAACTAAAC 59.999 47.619 0.00 0.00 0.00 2.01
165 166 1.273327 GCCATGCTTGCCAACTAAACT 59.727 47.619 0.00 0.00 0.00 2.66
166 167 2.289010 GCCATGCTTGCCAACTAAACTT 60.289 45.455 0.00 0.00 0.00 2.66
167 168 3.319755 CCATGCTTGCCAACTAAACTTG 58.680 45.455 0.00 0.00 0.00 3.16
168 169 2.507339 TGCTTGCCAACTAAACTTGC 57.493 45.000 0.00 0.00 0.00 4.01
169 170 1.068434 TGCTTGCCAACTAAACTTGCC 59.932 47.619 0.00 0.00 0.00 4.52
170 171 1.068434 GCTTGCCAACTAAACTTGCCA 59.932 47.619 0.00 0.00 0.00 4.92
171 172 2.289010 GCTTGCCAACTAAACTTGCCAT 60.289 45.455 0.00 0.00 0.00 4.40
172 173 3.578688 CTTGCCAACTAAACTTGCCATC 58.421 45.455 0.00 0.00 0.00 3.51
173 174 1.539388 TGCCAACTAAACTTGCCATCG 59.461 47.619 0.00 0.00 0.00 3.84
174 175 1.810151 GCCAACTAAACTTGCCATCGA 59.190 47.619 0.00 0.00 0.00 3.59
175 176 2.227865 GCCAACTAAACTTGCCATCGAA 59.772 45.455 0.00 0.00 0.00 3.71
176 177 3.305064 GCCAACTAAACTTGCCATCGAAA 60.305 43.478 0.00 0.00 0.00 3.46
177 178 4.794655 GCCAACTAAACTTGCCATCGAAAA 60.795 41.667 0.00 0.00 0.00 2.29
178 179 5.285651 CCAACTAAACTTGCCATCGAAAAA 58.714 37.500 0.00 0.00 0.00 1.94
201 202 4.666928 AAAAATGCCATGCAAATCGTTC 57.333 36.364 0.00 0.00 43.62 3.95
202 203 3.316071 AAATGCCATGCAAATCGTTCA 57.684 38.095 0.00 0.00 43.62 3.18
203 204 2.282701 ATGCCATGCAAATCGTTCAC 57.717 45.000 0.00 0.00 43.62 3.18
204 205 0.109827 TGCCATGCAAATCGTTCACG 60.110 50.000 0.00 0.00 34.76 4.35
205 206 0.109781 GCCATGCAAATCGTTCACGT 60.110 50.000 0.00 0.00 40.80 4.49
206 207 1.605500 CCATGCAAATCGTTCACGTG 58.394 50.000 9.94 9.94 40.80 4.49
207 208 1.196581 CCATGCAAATCGTTCACGTGA 59.803 47.619 15.76 15.76 40.80 4.35
208 209 2.233355 CATGCAAATCGTTCACGTGAC 58.767 47.619 19.90 12.53 40.80 3.67
209 210 1.291132 TGCAAATCGTTCACGTGACA 58.709 45.000 19.90 7.48 40.80 3.58
210 211 1.870402 TGCAAATCGTTCACGTGACAT 59.130 42.857 19.90 7.89 40.80 3.06
211 212 2.233355 GCAAATCGTTCACGTGACATG 58.767 47.619 19.90 14.53 40.80 3.21
212 213 2.233355 CAAATCGTTCACGTGACATGC 58.767 47.619 19.90 8.06 40.80 4.06
213 214 0.796312 AATCGTTCACGTGACATGCC 59.204 50.000 19.90 3.12 40.80 4.40
214 215 0.037326 ATCGTTCACGTGACATGCCT 60.037 50.000 19.90 0.00 40.80 4.75
215 216 0.666274 TCGTTCACGTGACATGCCTC 60.666 55.000 19.90 2.38 40.80 4.70
216 217 1.626654 CGTTCACGTGACATGCCTCC 61.627 60.000 19.90 0.00 34.11 4.30
217 218 0.320771 GTTCACGTGACATGCCTCCT 60.321 55.000 19.90 0.00 0.00 3.69
218 219 0.320683 TTCACGTGACATGCCTCCTG 60.321 55.000 19.90 0.00 0.00 3.86
219 220 1.742880 CACGTGACATGCCTCCTGG 60.743 63.158 10.90 0.00 0.00 4.45
220 221 2.217038 ACGTGACATGCCTCCTGGT 61.217 57.895 0.00 0.00 35.27 4.00
221 222 1.742880 CGTGACATGCCTCCTGGTG 60.743 63.158 0.00 0.00 35.27 4.17
222 223 1.679311 GTGACATGCCTCCTGGTGA 59.321 57.895 0.00 0.00 35.27 4.02
223 224 0.036732 GTGACATGCCTCCTGGTGAA 59.963 55.000 0.00 0.00 35.27 3.18
224 225 0.036732 TGACATGCCTCCTGGTGAAC 59.963 55.000 0.00 0.00 35.27 3.18
225 226 1.003355 ACATGCCTCCTGGTGAACG 60.003 57.895 0.00 0.00 35.27 3.95
226 227 1.003355 CATGCCTCCTGGTGAACGT 60.003 57.895 0.00 0.00 35.27 3.99
227 228 0.606401 CATGCCTCCTGGTGAACGTT 60.606 55.000 0.00 0.00 35.27 3.99
228 229 0.321653 ATGCCTCCTGGTGAACGTTC 60.322 55.000 21.42 21.42 35.27 3.95
229 230 2.027625 GCCTCCTGGTGAACGTTCG 61.028 63.158 22.48 8.65 35.27 3.95
230 231 1.663739 CCTCCTGGTGAACGTTCGA 59.336 57.895 22.48 12.36 0.00 3.71
231 232 0.388649 CCTCCTGGTGAACGTTCGAG 60.389 60.000 22.48 19.89 0.00 4.04
232 233 0.388649 CTCCTGGTGAACGTTCGAGG 60.389 60.000 24.62 24.62 0.00 4.63
233 234 1.374252 CCTGGTGAACGTTCGAGGG 60.374 63.158 23.58 18.27 0.00 4.30
234 235 1.366366 CTGGTGAACGTTCGAGGGT 59.634 57.895 22.48 0.00 0.00 4.34
235 236 0.249741 CTGGTGAACGTTCGAGGGTT 60.250 55.000 22.48 3.19 0.00 4.11
236 237 1.000060 CTGGTGAACGTTCGAGGGTTA 60.000 52.381 22.48 0.83 0.00 2.85
237 238 1.619827 TGGTGAACGTTCGAGGGTTAT 59.380 47.619 22.48 0.00 0.00 1.89
238 239 1.997606 GGTGAACGTTCGAGGGTTATG 59.002 52.381 22.48 0.00 0.00 1.90
239 240 2.353011 GGTGAACGTTCGAGGGTTATGA 60.353 50.000 22.48 0.00 0.00 2.15
240 241 2.921754 GTGAACGTTCGAGGGTTATGAG 59.078 50.000 22.48 0.00 0.00 2.90
241 242 2.094390 TGAACGTTCGAGGGTTATGAGG 60.094 50.000 22.48 0.00 0.00 3.86
242 243 0.822164 ACGTTCGAGGGTTATGAGGG 59.178 55.000 0.00 0.00 0.00 4.30
243 244 0.822164 CGTTCGAGGGTTATGAGGGT 59.178 55.000 0.00 0.00 0.00 4.34
244 245 1.206371 CGTTCGAGGGTTATGAGGGTT 59.794 52.381 0.00 0.00 0.00 4.11
245 246 2.354403 CGTTCGAGGGTTATGAGGGTTT 60.354 50.000 0.00 0.00 0.00 3.27
246 247 3.268330 GTTCGAGGGTTATGAGGGTTTC 58.732 50.000 0.00 0.00 0.00 2.78
247 248 1.835531 TCGAGGGTTATGAGGGTTTCC 59.164 52.381 0.00 0.00 0.00 3.13
249 250 3.036091 CGAGGGTTATGAGGGTTTCCTA 58.964 50.000 0.00 0.00 45.05 2.94
250 251 3.453353 CGAGGGTTATGAGGGTTTCCTAA 59.547 47.826 0.00 0.00 45.05 2.69
251 252 4.080751 CGAGGGTTATGAGGGTTTCCTAAA 60.081 45.833 0.00 0.00 45.05 1.85
252 253 5.572066 CGAGGGTTATGAGGGTTTCCTAAAA 60.572 44.000 0.00 0.00 45.05 1.52
253 254 6.222227 AGGGTTATGAGGGTTTCCTAAAAA 57.778 37.500 0.00 0.00 45.05 1.94
273 274 4.640789 AAAATCTAACCGCACAAACACA 57.359 36.364 0.00 0.00 0.00 3.72
274 275 4.846779 AAATCTAACCGCACAAACACAT 57.153 36.364 0.00 0.00 0.00 3.21
275 276 4.846779 AATCTAACCGCACAAACACATT 57.153 36.364 0.00 0.00 0.00 2.71
276 277 5.950758 AATCTAACCGCACAAACACATTA 57.049 34.783 0.00 0.00 0.00 1.90
277 278 4.735662 TCTAACCGCACAAACACATTAC 57.264 40.909 0.00 0.00 0.00 1.89
278 279 2.785713 AACCGCACAAACACATTACC 57.214 45.000 0.00 0.00 0.00 2.85
279 280 1.975660 ACCGCACAAACACATTACCT 58.024 45.000 0.00 0.00 0.00 3.08
280 281 1.877443 ACCGCACAAACACATTACCTC 59.123 47.619 0.00 0.00 0.00 3.85
281 282 2.151202 CCGCACAAACACATTACCTCT 58.849 47.619 0.00 0.00 0.00 3.69
282 283 2.095768 CCGCACAAACACATTACCTCTG 60.096 50.000 0.00 0.00 0.00 3.35
283 284 2.095768 CGCACAAACACATTACCTCTGG 60.096 50.000 0.00 0.00 0.00 3.86
284 285 3.146066 GCACAAACACATTACCTCTGGA 58.854 45.455 0.00 0.00 0.00 3.86
285 286 3.568007 GCACAAACACATTACCTCTGGAA 59.432 43.478 0.00 0.00 0.00 3.53
286 287 4.037446 GCACAAACACATTACCTCTGGAAA 59.963 41.667 0.00 0.00 0.00 3.13
287 288 5.451242 GCACAAACACATTACCTCTGGAAAA 60.451 40.000 0.00 0.00 0.00 2.29
288 289 6.208644 CACAAACACATTACCTCTGGAAAAG 58.791 40.000 0.00 0.00 0.00 2.27
289 290 6.039270 CACAAACACATTACCTCTGGAAAAGA 59.961 38.462 0.00 0.00 0.00 2.52
290 291 6.605594 ACAAACACATTACCTCTGGAAAAGAA 59.394 34.615 0.00 0.00 33.37 2.52
291 292 7.123547 ACAAACACATTACCTCTGGAAAAGAAA 59.876 33.333 0.00 0.00 33.37 2.52
292 293 7.654022 AACACATTACCTCTGGAAAAGAAAA 57.346 32.000 0.00 0.00 33.37 2.29
293 294 7.654022 ACACATTACCTCTGGAAAAGAAAAA 57.346 32.000 0.00 0.00 33.37 1.94
343 344 9.043548 TCTTTAAATAGGGTACTATATCCCAGC 57.956 37.037 3.04 0.00 45.64 4.85
344 345 5.934402 AAATAGGGTACTATATCCCAGCG 57.066 43.478 3.04 0.00 45.64 5.18
345 346 1.558233 AGGGTACTATATCCCAGCGC 58.442 55.000 0.00 0.00 45.64 5.92
346 347 1.077334 AGGGTACTATATCCCAGCGCT 59.923 52.381 2.64 2.64 45.64 5.92
347 348 1.900486 GGGTACTATATCCCAGCGCTT 59.100 52.381 7.50 0.00 42.95 4.68
348 349 2.353803 GGGTACTATATCCCAGCGCTTG 60.354 54.545 7.50 3.55 42.95 4.01
349 350 2.561419 GGTACTATATCCCAGCGCTTGA 59.439 50.000 7.50 8.26 0.00 3.02
350 351 3.006537 GGTACTATATCCCAGCGCTTGAA 59.993 47.826 7.50 0.00 0.00 2.69
351 352 4.322801 GGTACTATATCCCAGCGCTTGAAT 60.323 45.833 7.50 0.00 0.00 2.57
352 353 3.668447 ACTATATCCCAGCGCTTGAATG 58.332 45.455 7.50 0.00 0.00 2.67
353 354 2.936919 ATATCCCAGCGCTTGAATGA 57.063 45.000 7.50 0.00 0.00 2.57
354 355 2.708216 TATCCCAGCGCTTGAATGAA 57.292 45.000 7.50 0.00 0.00 2.57
355 356 1.386533 ATCCCAGCGCTTGAATGAAG 58.613 50.000 7.50 0.00 34.41 3.02
356 357 0.324614 TCCCAGCGCTTGAATGAAGA 59.675 50.000 7.50 0.00 32.82 2.87
357 358 1.065199 TCCCAGCGCTTGAATGAAGAT 60.065 47.619 7.50 0.00 32.82 2.40
358 359 1.065102 CCCAGCGCTTGAATGAAGATG 59.935 52.381 7.50 0.00 32.82 2.90
359 360 1.065102 CCAGCGCTTGAATGAAGATGG 59.935 52.381 7.50 0.00 32.82 3.51
360 361 1.065102 CAGCGCTTGAATGAAGATGGG 59.935 52.381 7.50 0.00 32.82 4.00
382 383 4.989168 GGAGTCACTGTAACGTTCTTGATT 59.011 41.667 2.82 0.00 0.00 2.57
661 708 1.643292 CATTGGCGCCGTGACTATG 59.357 57.895 23.90 13.57 32.47 2.23
662 709 1.523711 ATTGGCGCCGTGACTATGG 60.524 57.895 23.90 0.00 35.97 2.74
1515 1562 2.522185 ACGTATGGGTGTCACTACTGT 58.478 47.619 2.35 0.00 0.00 3.55
1516 1563 3.689347 ACGTATGGGTGTCACTACTGTA 58.311 45.455 2.35 0.00 0.00 2.74
1555 1602 3.634397 TGGATGGAGTGGAGAATGTTC 57.366 47.619 0.00 0.00 0.00 3.18
1559 1606 5.429762 TGGATGGAGTGGAGAATGTTCTAAT 59.570 40.000 0.00 0.00 37.73 1.73
1639 1686 2.431454 CACAGGGAAGAAGAGAAAGGC 58.569 52.381 0.00 0.00 0.00 4.35
1715 1777 1.591059 CGCGAAGGAGATGGCTCTG 60.591 63.158 0.00 0.00 41.06 3.35
1761 1823 1.681666 CTGAAGAAGGAGCTGGGCA 59.318 57.895 0.00 0.00 0.00 5.36
1784 1846 1.023513 CCAAGAAGAGGGAGCTTGCG 61.024 60.000 0.00 0.00 38.10 4.85
1973 2035 2.558359 AGTTATGTTTGAGTTGGCTGCC 59.442 45.455 12.87 12.87 0.00 4.85
2015 2078 9.673454 AAATTACGAACTTAGAAATTTGTGGAC 57.327 29.630 0.00 0.00 30.69 4.02
2073 2139 4.971939 TGAGTTGGTTGATGATTCTCACA 58.028 39.130 0.00 0.00 0.00 3.58
2077 2143 5.184479 AGTTGGTTGATGATTCTCACATTGG 59.816 40.000 0.00 0.00 0.00 3.16
2086 2152 6.647334 TGATTCTCACATTGGTAGCAAAAA 57.353 33.333 12.00 0.74 0.00 1.94
2210 2276 7.580495 CGGAAATTCCCCTTCATTCCAAAATAA 60.580 37.037 6.42 0.00 39.59 1.40
2239 2305 9.550811 GTCATATTTAAACTAAAACCACGAAGG 57.449 33.333 0.00 0.00 45.67 3.46
2240 2306 9.504708 TCATATTTAAACTAAAACCACGAAGGA 57.495 29.630 5.70 0.00 41.22 3.36
2249 2315 9.813446 AACTAAAACCACGAAGGATATACTTAG 57.187 33.333 0.00 2.91 41.22 2.18
2250 2316 7.924947 ACTAAAACCACGAAGGATATACTTAGC 59.075 37.037 7.65 0.00 41.22 3.09
2251 2317 5.864418 AACCACGAAGGATATACTTAGCA 57.136 39.130 7.65 0.00 41.22 3.49
2252 2318 6.420913 AACCACGAAGGATATACTTAGCAT 57.579 37.500 7.65 0.00 41.22 3.79
2253 2319 7.534723 AACCACGAAGGATATACTTAGCATA 57.465 36.000 7.65 0.00 41.22 3.14
2254 2320 7.159322 ACCACGAAGGATATACTTAGCATAG 57.841 40.000 7.65 0.00 41.22 2.23
2255 2321 6.946583 ACCACGAAGGATATACTTAGCATAGA 59.053 38.462 7.65 0.00 41.22 1.98
2256 2322 7.616150 ACCACGAAGGATATACTTAGCATAGAT 59.384 37.037 7.65 0.00 41.22 1.98
2257 2323 7.918033 CCACGAAGGATATACTTAGCATAGATG 59.082 40.741 7.65 0.00 41.22 2.90
2258 2324 8.462811 CACGAAGGATATACTTAGCATAGATGT 58.537 37.037 7.65 0.00 0.00 3.06
2259 2325 8.462811 ACGAAGGATATACTTAGCATAGATGTG 58.537 37.037 7.65 0.00 0.00 3.21
2260 2326 7.433719 CGAAGGATATACTTAGCATAGATGTGC 59.566 40.741 0.00 0.00 45.38 4.57
2274 2340 8.693542 GCATAGATGTGCATTTTTAAAGAACT 57.306 30.769 0.00 0.00 44.43 3.01
2275 2341 9.787532 GCATAGATGTGCATTTTTAAAGAACTA 57.212 29.630 0.00 0.00 44.43 2.24
2279 2345 9.559958 AGATGTGCATTTTTAAAGAACTATTCG 57.440 29.630 0.00 0.00 34.02 3.34
2280 2346 9.554724 GATGTGCATTTTTAAAGAACTATTCGA 57.445 29.630 0.00 0.00 34.02 3.71
2282 2348 9.554724 TGTGCATTTTTAAAGAACTATTCGATC 57.445 29.630 0.00 0.00 34.02 3.69
2283 2349 9.010366 GTGCATTTTTAAAGAACTATTCGATCC 57.990 33.333 0.00 0.00 34.02 3.36
2284 2350 8.735315 TGCATTTTTAAAGAACTATTCGATCCA 58.265 29.630 0.00 0.00 34.02 3.41
2285 2351 9.226345 GCATTTTTAAAGAACTATTCGATCCAG 57.774 33.333 0.00 0.00 34.02 3.86
2286 2352 9.226345 CATTTTTAAAGAACTATTCGATCCAGC 57.774 33.333 0.00 0.00 34.02 4.85
2287 2353 6.920569 TTTAAAGAACTATTCGATCCAGCC 57.079 37.500 0.00 0.00 34.02 4.85
2288 2354 4.487714 AAAGAACTATTCGATCCAGCCA 57.512 40.909 0.00 0.00 34.02 4.75
2289 2355 3.742433 AGAACTATTCGATCCAGCCAG 57.258 47.619 0.00 0.00 34.02 4.85
2290 2356 3.034635 AGAACTATTCGATCCAGCCAGT 58.965 45.455 0.00 0.00 34.02 4.00
2291 2357 4.215908 AGAACTATTCGATCCAGCCAGTA 58.784 43.478 0.00 0.00 34.02 2.74
2292 2358 4.279671 AGAACTATTCGATCCAGCCAGTAG 59.720 45.833 0.00 0.00 34.02 2.57
2293 2359 2.297597 ACTATTCGATCCAGCCAGTAGC 59.702 50.000 0.00 0.00 44.25 3.58
2294 2360 0.394565 ATTCGATCCAGCCAGTAGCC 59.605 55.000 0.00 0.00 45.47 3.93
2295 2361 0.975556 TTCGATCCAGCCAGTAGCCA 60.976 55.000 0.00 0.00 45.47 4.75
2296 2362 0.760567 TCGATCCAGCCAGTAGCCAT 60.761 55.000 0.00 0.00 45.47 4.40
2297 2363 0.320247 CGATCCAGCCAGTAGCCATC 60.320 60.000 0.00 0.00 45.47 3.51
2298 2364 1.055040 GATCCAGCCAGTAGCCATCT 58.945 55.000 0.00 0.00 45.47 2.90
2299 2365 1.419387 GATCCAGCCAGTAGCCATCTT 59.581 52.381 0.00 0.00 45.47 2.40
2300 2366 0.543277 TCCAGCCAGTAGCCATCTTG 59.457 55.000 0.00 0.00 45.47 3.02
2301 2367 0.254178 CCAGCCAGTAGCCATCTTGT 59.746 55.000 0.00 0.00 45.47 3.16
2302 2368 1.661341 CAGCCAGTAGCCATCTTGTC 58.339 55.000 0.00 0.00 45.47 3.18
2303 2369 0.543749 AGCCAGTAGCCATCTTGTCC 59.456 55.000 0.00 0.00 45.47 4.02
2304 2370 0.464554 GCCAGTAGCCATCTTGTCCC 60.465 60.000 0.00 0.00 34.35 4.46
2305 2371 1.207791 CCAGTAGCCATCTTGTCCCT 58.792 55.000 0.00 0.00 0.00 4.20
2306 2372 2.398588 CCAGTAGCCATCTTGTCCCTA 58.601 52.381 0.00 0.00 0.00 3.53
2307 2373 2.366916 CCAGTAGCCATCTTGTCCCTAG 59.633 54.545 0.00 0.00 0.00 3.02
2308 2374 2.366916 CAGTAGCCATCTTGTCCCTAGG 59.633 54.545 0.06 0.06 0.00 3.02
2309 2375 1.070914 GTAGCCATCTTGTCCCTAGGC 59.929 57.143 2.05 0.00 42.31 3.93
2310 2376 0.327000 AGCCATCTTGTCCCTAGGCT 60.327 55.000 2.05 0.00 46.89 4.58
2311 2377 0.548510 GCCATCTTGTCCCTAGGCTT 59.451 55.000 2.05 0.00 39.02 4.35
2312 2378 1.748591 GCCATCTTGTCCCTAGGCTTG 60.749 57.143 2.05 0.00 39.02 4.01
2313 2379 1.839994 CCATCTTGTCCCTAGGCTTGA 59.160 52.381 2.05 0.00 0.00 3.02
2314 2380 2.441001 CCATCTTGTCCCTAGGCTTGAT 59.559 50.000 2.05 0.00 0.00 2.57
2315 2381 3.648067 CCATCTTGTCCCTAGGCTTGATA 59.352 47.826 2.05 0.00 0.00 2.15
2316 2382 4.103153 CCATCTTGTCCCTAGGCTTGATAA 59.897 45.833 2.05 0.00 0.00 1.75
2317 2383 5.222007 CCATCTTGTCCCTAGGCTTGATAAT 60.222 44.000 2.05 0.00 0.00 1.28
2318 2384 5.975988 TCTTGTCCCTAGGCTTGATAATT 57.024 39.130 2.05 0.00 0.00 1.40
2319 2385 5.930135 TCTTGTCCCTAGGCTTGATAATTC 58.070 41.667 2.05 0.00 0.00 2.17
2320 2386 5.428457 TCTTGTCCCTAGGCTTGATAATTCA 59.572 40.000 2.05 0.00 0.00 2.57
2321 2387 5.296151 TGTCCCTAGGCTTGATAATTCAG 57.704 43.478 2.05 0.00 32.27 3.02
2322 2388 4.103153 TGTCCCTAGGCTTGATAATTCAGG 59.897 45.833 2.05 0.00 32.27 3.86
2323 2389 3.652869 TCCCTAGGCTTGATAATTCAGGG 59.347 47.826 2.05 6.85 33.27 4.45
2324 2390 3.245052 CCCTAGGCTTGATAATTCAGGGG 60.245 52.174 2.05 0.00 32.27 4.79
2325 2391 3.395941 CCTAGGCTTGATAATTCAGGGGT 59.604 47.826 0.00 0.00 32.27 4.95
2326 2392 3.584733 AGGCTTGATAATTCAGGGGTC 57.415 47.619 0.00 0.00 32.27 4.46
2327 2393 3.126453 AGGCTTGATAATTCAGGGGTCT 58.874 45.455 0.00 0.00 32.27 3.85
2328 2394 3.117738 AGGCTTGATAATTCAGGGGTCTG 60.118 47.826 0.00 0.00 42.21 3.51
2329 2395 3.217626 GCTTGATAATTCAGGGGTCTGG 58.782 50.000 0.00 0.00 41.23 3.86
2330 2396 3.825328 CTTGATAATTCAGGGGTCTGGG 58.175 50.000 0.00 0.00 41.23 4.45
2331 2397 2.135189 TGATAATTCAGGGGTCTGGGG 58.865 52.381 0.00 0.00 41.23 4.96
2332 2398 2.294195 TGATAATTCAGGGGTCTGGGGA 60.294 50.000 0.00 0.00 41.23 4.81
2333 2399 1.591768 TAATTCAGGGGTCTGGGGAC 58.408 55.000 0.00 0.00 41.23 4.46
2334 2400 1.562672 AATTCAGGGGTCTGGGGACG 61.563 60.000 0.00 0.00 42.97 4.79
2335 2401 2.471084 ATTCAGGGGTCTGGGGACGA 62.471 60.000 0.00 0.00 42.97 4.20
2336 2402 2.606519 CAGGGGTCTGGGGACGAA 60.607 66.667 0.00 0.00 42.97 3.85
2337 2403 2.206036 AGGGGTCTGGGGACGAAA 59.794 61.111 0.00 0.00 42.97 3.46
2338 2404 1.229853 AGGGGTCTGGGGACGAAAT 60.230 57.895 0.00 0.00 42.97 2.17
2339 2405 0.043637 AGGGGTCTGGGGACGAAATA 59.956 55.000 0.00 0.00 42.97 1.40
2340 2406 0.913924 GGGGTCTGGGGACGAAATAA 59.086 55.000 0.00 0.00 42.97 1.40
2341 2407 1.134189 GGGGTCTGGGGACGAAATAAG 60.134 57.143 0.00 0.00 42.97 1.73
2342 2408 1.835531 GGGTCTGGGGACGAAATAAGA 59.164 52.381 0.00 0.00 42.97 2.10
2343 2409 2.237893 GGGTCTGGGGACGAAATAAGAA 59.762 50.000 0.00 0.00 42.97 2.52
2344 2410 3.268330 GGTCTGGGGACGAAATAAGAAC 58.732 50.000 0.00 0.00 42.97 3.01
2345 2411 3.268330 GTCTGGGGACGAAATAAGAACC 58.732 50.000 0.00 0.00 32.47 3.62
2346 2412 2.237893 TCTGGGGACGAAATAAGAACCC 59.762 50.000 0.00 0.00 37.20 4.11
2347 2413 1.986631 TGGGGACGAAATAAGAACCCA 59.013 47.619 0.00 0.00 43.95 4.51
2348 2414 2.290450 TGGGGACGAAATAAGAACCCAC 60.290 50.000 0.00 0.00 41.48 4.61
2349 2415 2.290450 GGGGACGAAATAAGAACCCACA 60.290 50.000 0.00 0.00 39.10 4.17
2350 2416 3.007635 GGGACGAAATAAGAACCCACAG 58.992 50.000 0.00 0.00 37.50 3.66
2351 2417 2.418976 GGACGAAATAAGAACCCACAGC 59.581 50.000 0.00 0.00 0.00 4.40
2352 2418 2.073816 ACGAAATAAGAACCCACAGCG 58.926 47.619 0.00 0.00 0.00 5.18
2353 2419 1.202031 CGAAATAAGAACCCACAGCGC 60.202 52.381 0.00 0.00 0.00 5.92
2354 2420 1.810151 GAAATAAGAACCCACAGCGCA 59.190 47.619 11.47 0.00 0.00 6.09
2355 2421 2.128771 AATAAGAACCCACAGCGCAT 57.871 45.000 11.47 0.00 0.00 4.73
2356 2422 1.668419 ATAAGAACCCACAGCGCATC 58.332 50.000 11.47 0.00 0.00 3.91
2357 2423 0.323302 TAAGAACCCACAGCGCATCA 59.677 50.000 11.47 0.00 0.00 3.07
2358 2424 0.537143 AAGAACCCACAGCGCATCAA 60.537 50.000 11.47 0.00 0.00 2.57
2359 2425 0.322816 AGAACCCACAGCGCATCAAT 60.323 50.000 11.47 0.00 0.00 2.57
2360 2426 1.065491 AGAACCCACAGCGCATCAATA 60.065 47.619 11.47 0.00 0.00 1.90
2361 2427 1.949525 GAACCCACAGCGCATCAATAT 59.050 47.619 11.47 0.00 0.00 1.28
2362 2428 2.928801 ACCCACAGCGCATCAATATA 57.071 45.000 11.47 0.00 0.00 0.86
2363 2429 3.207265 ACCCACAGCGCATCAATATAA 57.793 42.857 11.47 0.00 0.00 0.98
2364 2430 3.550820 ACCCACAGCGCATCAATATAAA 58.449 40.909 11.47 0.00 0.00 1.40
2365 2431 4.144297 ACCCACAGCGCATCAATATAAAT 58.856 39.130 11.47 0.00 0.00 1.40
2366 2432 5.312895 ACCCACAGCGCATCAATATAAATA 58.687 37.500 11.47 0.00 0.00 1.40
2367 2433 5.945784 ACCCACAGCGCATCAATATAAATAT 59.054 36.000 11.47 0.00 0.00 1.28
2368 2434 7.109501 ACCCACAGCGCATCAATATAAATATA 58.890 34.615 11.47 0.00 0.00 0.86
2369 2435 7.775093 ACCCACAGCGCATCAATATAAATATAT 59.225 33.333 11.47 0.00 0.00 0.86
2370 2436 8.071967 CCCACAGCGCATCAATATAAATATATG 58.928 37.037 11.47 0.00 0.00 1.78
2371 2437 8.071967 CCACAGCGCATCAATATAAATATATGG 58.928 37.037 11.47 0.00 0.00 2.74
2372 2438 8.829612 CACAGCGCATCAATATAAATATATGGA 58.170 33.333 11.47 1.02 34.14 3.41
2373 2439 9.394767 ACAGCGCATCAATATAAATATATGGAA 57.605 29.630 11.47 0.00 33.53 3.53
2394 2460 8.378172 TGGAAACATGTACTCTTTTTAGTCTG 57.622 34.615 0.00 0.00 33.40 3.51
2395 2461 7.041372 TGGAAACATGTACTCTTTTTAGTCTGC 60.041 37.037 0.00 0.00 33.40 4.26
2396 2462 7.041372 GGAAACATGTACTCTTTTTAGTCTGCA 60.041 37.037 0.00 0.00 0.00 4.41
2397 2463 7.986085 AACATGTACTCTTTTTAGTCTGCAT 57.014 32.000 0.00 0.00 0.00 3.96
2398 2464 9.502091 AAACATGTACTCTTTTTAGTCTGCATA 57.498 29.630 0.00 0.00 0.00 3.14
2399 2465 9.502091 AACATGTACTCTTTTTAGTCTGCATAA 57.498 29.630 0.00 0.00 0.00 1.90
2400 2466 8.936864 ACATGTACTCTTTTTAGTCTGCATAAC 58.063 33.333 0.00 0.00 0.00 1.89
2401 2467 7.900782 TGTACTCTTTTTAGTCTGCATAACC 57.099 36.000 0.00 0.00 0.00 2.85
2402 2468 7.676947 TGTACTCTTTTTAGTCTGCATAACCT 58.323 34.615 0.00 0.00 0.00 3.50
2403 2469 7.817962 TGTACTCTTTTTAGTCTGCATAACCTC 59.182 37.037 0.00 0.00 0.00 3.85
2404 2470 7.010339 ACTCTTTTTAGTCTGCATAACCTCT 57.990 36.000 0.00 0.00 0.00 3.69
2405 2471 8.135382 ACTCTTTTTAGTCTGCATAACCTCTA 57.865 34.615 0.00 0.00 0.00 2.43
2406 2472 8.035984 ACTCTTTTTAGTCTGCATAACCTCTAC 58.964 37.037 0.00 0.00 0.00 2.59
2407 2473 7.033791 TCTTTTTAGTCTGCATAACCTCTACG 58.966 38.462 0.00 0.00 0.00 3.51
2408 2474 2.873133 AGTCTGCATAACCTCTACGC 57.127 50.000 0.00 0.00 0.00 4.42
2409 2475 2.379972 AGTCTGCATAACCTCTACGCT 58.620 47.619 0.00 0.00 0.00 5.07
2410 2476 2.761208 AGTCTGCATAACCTCTACGCTT 59.239 45.455 0.00 0.00 0.00 4.68
2411 2477 3.195825 AGTCTGCATAACCTCTACGCTTT 59.804 43.478 0.00 0.00 0.00 3.51
2412 2478 3.552294 GTCTGCATAACCTCTACGCTTTC 59.448 47.826 0.00 0.00 0.00 2.62
2413 2479 2.866762 CTGCATAACCTCTACGCTTTCC 59.133 50.000 0.00 0.00 0.00 3.13
2414 2480 2.500098 TGCATAACCTCTACGCTTTCCT 59.500 45.455 0.00 0.00 0.00 3.36
2415 2481 2.866762 GCATAACCTCTACGCTTTCCTG 59.133 50.000 0.00 0.00 0.00 3.86
2416 2482 3.458189 CATAACCTCTACGCTTTCCTGG 58.542 50.000 0.00 0.00 0.00 4.45
2417 2483 0.613777 AACCTCTACGCTTTCCTGGG 59.386 55.000 0.00 0.00 0.00 4.45
2418 2484 1.265454 ACCTCTACGCTTTCCTGGGG 61.265 60.000 0.00 0.00 0.00 4.96
2419 2485 1.153349 CTCTACGCTTTCCTGGGGC 60.153 63.158 0.00 0.00 0.00 5.80
2420 2486 1.612442 TCTACGCTTTCCTGGGGCT 60.612 57.895 0.00 0.00 0.00 5.19
2421 2487 1.450312 CTACGCTTTCCTGGGGCTG 60.450 63.158 0.00 0.00 0.00 4.85
2422 2488 3.622060 TACGCTTTCCTGGGGCTGC 62.622 63.158 0.00 0.00 0.00 5.25
2424 2490 4.684134 GCTTTCCTGGGGCTGCCA 62.684 66.667 22.05 0.00 0.00 4.92
2425 2491 2.361771 CTTTCCTGGGGCTGCCAT 59.638 61.111 22.05 0.00 0.00 4.40
2426 2492 1.614711 CTTTCCTGGGGCTGCCATA 59.385 57.895 22.05 7.49 0.00 2.74
2427 2493 0.753111 CTTTCCTGGGGCTGCCATAC 60.753 60.000 22.05 10.57 0.00 2.39
2428 2494 2.223464 TTTCCTGGGGCTGCCATACC 62.223 60.000 22.05 13.21 0.00 2.73
2429 2495 3.099170 CCTGGGGCTGCCATACCT 61.099 66.667 22.05 0.00 0.00 3.08
2430 2496 1.770110 CCTGGGGCTGCCATACCTA 60.770 63.158 22.05 0.00 0.00 3.08
2431 2497 1.136329 CCTGGGGCTGCCATACCTAT 61.136 60.000 22.05 0.00 0.00 2.57
2432 2498 1.656587 CTGGGGCTGCCATACCTATA 58.343 55.000 22.05 0.00 0.00 1.31
2433 2499 2.200081 CTGGGGCTGCCATACCTATAT 58.800 52.381 22.05 0.00 0.00 0.86
2434 2500 2.578021 CTGGGGCTGCCATACCTATATT 59.422 50.000 22.05 0.00 0.00 1.28
2435 2501 2.993146 TGGGGCTGCCATACCTATATTT 59.007 45.455 22.05 0.00 0.00 1.40
2436 2502 3.245229 TGGGGCTGCCATACCTATATTTG 60.245 47.826 22.05 0.00 0.00 2.32
2437 2503 3.245264 GGGGCTGCCATACCTATATTTGT 60.245 47.826 22.05 0.00 0.00 2.83
2438 2504 4.407365 GGGCTGCCATACCTATATTTGTT 58.593 43.478 22.05 0.00 0.00 2.83
2439 2505 4.459337 GGGCTGCCATACCTATATTTGTTC 59.541 45.833 22.05 0.00 0.00 3.18
2440 2506 5.316987 GGCTGCCATACCTATATTTGTTCT 58.683 41.667 15.17 0.00 0.00 3.01
2441 2507 5.412904 GGCTGCCATACCTATATTTGTTCTC 59.587 44.000 15.17 0.00 0.00 2.87
2442 2508 6.234177 GCTGCCATACCTATATTTGTTCTCT 58.766 40.000 0.00 0.00 0.00 3.10
2443 2509 6.148480 GCTGCCATACCTATATTTGTTCTCTG 59.852 42.308 0.00 0.00 0.00 3.35
2444 2510 6.533730 TGCCATACCTATATTTGTTCTCTGG 58.466 40.000 0.00 0.00 0.00 3.86
2445 2511 5.412904 GCCATACCTATATTTGTTCTCTGGC 59.587 44.000 0.00 0.00 37.68 4.85
2446 2512 6.533730 CCATACCTATATTTGTTCTCTGGCA 58.466 40.000 0.00 0.00 0.00 4.92
2447 2513 6.428159 CCATACCTATATTTGTTCTCTGGCAC 59.572 42.308 0.00 0.00 0.00 5.01
2448 2514 5.700402 ACCTATATTTGTTCTCTGGCACT 57.300 39.130 0.00 0.00 0.00 4.40
2449 2515 6.808321 ACCTATATTTGTTCTCTGGCACTA 57.192 37.500 0.00 0.00 0.00 2.74
2450 2516 6.583562 ACCTATATTTGTTCTCTGGCACTAC 58.416 40.000 0.00 0.00 0.00 2.73
2451 2517 6.156256 ACCTATATTTGTTCTCTGGCACTACA 59.844 38.462 0.00 0.00 0.00 2.74
2452 2518 7.047891 CCTATATTTGTTCTCTGGCACTACAA 58.952 38.462 0.00 0.00 0.00 2.41
2453 2519 6.992063 ATATTTGTTCTCTGGCACTACAAG 57.008 37.500 0.00 0.00 31.19 3.16
2454 2520 4.415881 TTTGTTCTCTGGCACTACAAGA 57.584 40.909 0.00 0.00 31.19 3.02
2455 2521 4.415881 TTGTTCTCTGGCACTACAAGAA 57.584 40.909 0.00 0.00 0.00 2.52
2456 2522 4.623932 TGTTCTCTGGCACTACAAGAAT 57.376 40.909 0.00 0.00 0.00 2.40
2457 2523 4.973168 TGTTCTCTGGCACTACAAGAATT 58.027 39.130 0.00 0.00 0.00 2.17
2487 2553 8.483307 GTAAATCTACGACCATTTAAGACCAA 57.517 34.615 0.00 0.00 0.00 3.67
2488 2554 9.106070 GTAAATCTACGACCATTTAAGACCAAT 57.894 33.333 0.00 0.00 0.00 3.16
2489 2555 8.575649 AAATCTACGACCATTTAAGACCAATT 57.424 30.769 0.00 0.00 0.00 2.32
2490 2556 6.978343 TCTACGACCATTTAAGACCAATTG 57.022 37.500 0.00 0.00 0.00 2.32
2491 2557 5.878116 TCTACGACCATTTAAGACCAATTGG 59.122 40.000 23.31 23.31 42.17 3.16
2505 2571 3.052036 CCAATTGGTCAAAAGCTGTTCG 58.948 45.455 16.90 0.00 0.00 3.95
2506 2572 3.243367 CCAATTGGTCAAAAGCTGTTCGA 60.243 43.478 16.90 0.00 0.00 3.71
2507 2573 3.904136 ATTGGTCAAAAGCTGTTCGAG 57.096 42.857 0.00 0.00 0.00 4.04
2508 2574 1.593196 TGGTCAAAAGCTGTTCGAGG 58.407 50.000 0.00 0.00 0.00 4.63
2509 2575 1.140052 TGGTCAAAAGCTGTTCGAGGA 59.860 47.619 0.00 0.00 0.00 3.71
2510 2576 1.801178 GGTCAAAAGCTGTTCGAGGAG 59.199 52.381 0.00 0.00 0.00 3.69
2511 2577 1.195674 GTCAAAAGCTGTTCGAGGAGC 59.804 52.381 9.20 9.20 35.28 4.70
2513 2579 1.462670 CAAAAGCTGTTCGAGGAGCTC 59.537 52.381 17.73 4.71 44.97 4.09
2514 2580 0.972883 AAAGCTGTTCGAGGAGCTCT 59.027 50.000 17.73 4.53 44.97 4.09
2515 2581 1.840737 AAGCTGTTCGAGGAGCTCTA 58.159 50.000 17.73 0.00 44.97 2.43
2516 2582 1.840737 AGCTGTTCGAGGAGCTCTAA 58.159 50.000 14.64 0.55 41.94 2.10
2517 2583 1.474879 AGCTGTTCGAGGAGCTCTAAC 59.525 52.381 14.64 12.99 41.94 2.34
2518 2584 1.470112 GCTGTTCGAGGAGCTCTAACC 60.470 57.143 14.64 0.00 35.98 2.85
2519 2585 1.819288 CTGTTCGAGGAGCTCTAACCA 59.181 52.381 14.64 2.76 35.98 3.67
2520 2586 2.428890 CTGTTCGAGGAGCTCTAACCAT 59.571 50.000 14.64 0.00 35.98 3.55
2521 2587 2.832129 TGTTCGAGGAGCTCTAACCATT 59.168 45.455 14.64 0.00 35.98 3.16
2522 2588 3.260884 TGTTCGAGGAGCTCTAACCATTT 59.739 43.478 14.64 0.00 35.98 2.32
2523 2589 4.254492 GTTCGAGGAGCTCTAACCATTTT 58.746 43.478 14.64 0.00 32.38 1.82
2524 2590 3.861840 TCGAGGAGCTCTAACCATTTTG 58.138 45.455 14.64 0.00 0.00 2.44
2525 2591 2.939103 CGAGGAGCTCTAACCATTTTGG 59.061 50.000 14.64 0.00 45.02 3.28
2538 2604 3.244976 CCATTTTGGTCAGAAATGTCGC 58.755 45.455 8.28 0.00 40.94 5.19
2539 2605 3.305267 CCATTTTGGTCAGAAATGTCGCA 60.305 43.478 8.28 0.00 40.94 5.10
2540 2606 4.297510 CATTTTGGTCAGAAATGTCGCAA 58.702 39.130 0.00 0.00 38.85 4.85
2541 2607 4.582701 TTTTGGTCAGAAATGTCGCAAT 57.417 36.364 0.00 0.00 0.00 3.56
2542 2608 4.582701 TTTGGTCAGAAATGTCGCAATT 57.417 36.364 0.00 0.00 0.00 2.32
2543 2609 4.582701 TTGGTCAGAAATGTCGCAATTT 57.417 36.364 0.00 0.00 32.43 1.82
2544 2610 4.582701 TGGTCAGAAATGTCGCAATTTT 57.417 36.364 0.00 0.00 29.89 1.82
2545 2611 4.942852 TGGTCAGAAATGTCGCAATTTTT 58.057 34.783 0.00 0.00 29.89 1.94
2571 2637 3.369835 CGAAATGGTCGTAAAGCAGAC 57.630 47.619 0.00 0.00 45.09 3.51
2572 2638 2.993899 CGAAATGGTCGTAAAGCAGACT 59.006 45.455 0.00 0.00 45.09 3.24
2573 2639 3.181530 CGAAATGGTCGTAAAGCAGACTG 60.182 47.826 0.00 0.00 45.09 3.51
2574 2640 1.726853 ATGGTCGTAAAGCAGACTGC 58.273 50.000 20.12 20.12 45.46 4.40
2583 2649 2.746359 GCAGACTGCACTGGTCCT 59.254 61.111 22.62 0.00 44.26 3.85
2584 2650 1.375268 GCAGACTGCACTGGTCCTC 60.375 63.158 22.62 0.00 44.26 3.71
2585 2651 1.080230 CAGACTGCACTGGTCCTCG 60.080 63.158 1.23 0.00 34.56 4.63
2586 2652 1.228583 AGACTGCACTGGTCCTCGA 60.229 57.895 1.23 0.00 34.56 4.04
2587 2653 0.827925 AGACTGCACTGGTCCTCGAA 60.828 55.000 1.23 0.00 34.56 3.71
2588 2654 0.667792 GACTGCACTGGTCCTCGAAC 60.668 60.000 0.00 0.00 0.00 3.95
2589 2655 1.367471 CTGCACTGGTCCTCGAACA 59.633 57.895 0.00 0.00 0.00 3.18
2590 2656 0.036952 CTGCACTGGTCCTCGAACAT 60.037 55.000 0.00 0.00 0.00 2.71
2630 2696 1.003545 GACGCCACATCATCAATTCCG 60.004 52.381 0.00 0.00 0.00 4.30
2641 2707 0.457166 TCAATTCCGCCTACGTGTCG 60.457 55.000 0.00 0.00 37.70 4.35
2667 2733 7.222611 GTGTCATTTTTGCTTATGTGTCACTTT 59.777 33.333 4.27 0.00 0.00 2.66
2706 2985 8.081633 TGACCACTCACATATTTTAGCAAAAAG 58.918 33.333 0.00 0.00 37.97 2.27
2761 3040 8.277018 GTCTAAGTCTTGTTTAGAGAAGCAAAC 58.723 37.037 0.00 0.00 37.70 2.93
2762 3041 7.985184 TCTAAGTCTTGTTTAGAGAAGCAAACA 59.015 33.333 0.00 0.00 41.56 2.83
2779 3058 1.060163 ACAACCAGGCTACCACCACT 61.060 55.000 0.00 0.00 0.00 4.00
2783 3062 0.110486 CCAGGCTACCACCACTTTGT 59.890 55.000 0.00 0.00 0.00 2.83
2784 3063 1.478654 CCAGGCTACCACCACTTTGTT 60.479 52.381 0.00 0.00 0.00 2.83
2800 3079 3.192230 TTGATTGGGTAGCGCGCG 61.192 61.111 28.44 28.44 0.00 6.86
2828 3107 4.181309 ACTTAAGGCTTCTCTTCGACTG 57.819 45.455 1.30 0.00 0.00 3.51
2832 3111 1.594310 GCTTCTCTTCGACTGGGCT 59.406 57.895 0.00 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.340088 TTGCCGAGTAAGTGGGTACA 58.660 50.000 0.00 0.00 0.00 2.90
27 28 2.460757 TTTGCCGAGTAAGTGGGTAC 57.539 50.000 0.00 0.00 0.00 3.34
28 29 2.104451 TGTTTTGCCGAGTAAGTGGGTA 59.896 45.455 0.00 0.00 0.00 3.69
29 30 1.134037 TGTTTTGCCGAGTAAGTGGGT 60.134 47.619 0.00 0.00 0.00 4.51
30 31 1.600023 TGTTTTGCCGAGTAAGTGGG 58.400 50.000 0.00 0.00 0.00 4.61
31 32 3.066203 AGTTTGTTTTGCCGAGTAAGTGG 59.934 43.478 0.00 0.00 0.00 4.00
32 33 4.287238 AGTTTGTTTTGCCGAGTAAGTG 57.713 40.909 0.00 0.00 0.00 3.16
33 34 4.976224 AAGTTTGTTTTGCCGAGTAAGT 57.024 36.364 0.00 0.00 0.00 2.24
34 35 6.641176 AAAAAGTTTGTTTTGCCGAGTAAG 57.359 33.333 0.00 0.00 29.56 2.34
54 55 5.741510 CGCGACATCTAAATTGCCATAAAAA 59.258 36.000 0.00 0.00 0.00 1.94
55 56 5.065346 TCGCGACATCTAAATTGCCATAAAA 59.935 36.000 3.71 0.00 0.00 1.52
56 57 4.572795 TCGCGACATCTAAATTGCCATAAA 59.427 37.500 3.71 0.00 0.00 1.40
57 58 4.123506 TCGCGACATCTAAATTGCCATAA 58.876 39.130 3.71 0.00 0.00 1.90
58 59 3.723260 TCGCGACATCTAAATTGCCATA 58.277 40.909 3.71 0.00 0.00 2.74
59 60 2.545526 CTCGCGACATCTAAATTGCCAT 59.454 45.455 3.71 0.00 0.00 4.40
60 61 1.933181 CTCGCGACATCTAAATTGCCA 59.067 47.619 3.71 0.00 0.00 4.92
61 62 2.201732 TCTCGCGACATCTAAATTGCC 58.798 47.619 3.71 0.00 0.00 4.52
62 63 3.925688 TTCTCGCGACATCTAAATTGC 57.074 42.857 3.71 0.00 0.00 3.56
63 64 7.398746 TGTTTATTCTCGCGACATCTAAATTG 58.601 34.615 3.71 0.00 0.00 2.32
64 65 7.534085 TGTTTATTCTCGCGACATCTAAATT 57.466 32.000 3.71 0.00 0.00 1.82
65 66 7.534085 TTGTTTATTCTCGCGACATCTAAAT 57.466 32.000 3.71 1.25 0.00 1.40
66 67 6.954616 TTGTTTATTCTCGCGACATCTAAA 57.045 33.333 3.71 4.59 0.00 1.85
67 68 6.954616 TTTGTTTATTCTCGCGACATCTAA 57.045 33.333 3.71 0.00 0.00 2.10
68 69 7.534085 AATTTGTTTATTCTCGCGACATCTA 57.466 32.000 3.71 0.00 0.00 1.98
69 70 6.422776 AATTTGTTTATTCTCGCGACATCT 57.577 33.333 3.71 0.00 0.00 2.90
70 71 7.903431 ACTAAATTTGTTTATTCTCGCGACATC 59.097 33.333 3.71 0.00 0.00 3.06
71 72 7.748847 ACTAAATTTGTTTATTCTCGCGACAT 58.251 30.769 3.71 2.53 0.00 3.06
72 73 7.124347 ACTAAATTTGTTTATTCTCGCGACA 57.876 32.000 3.71 0.00 0.00 4.35
73 74 9.195831 CTAACTAAATTTGTTTATTCTCGCGAC 57.804 33.333 3.71 0.00 0.00 5.19
74 75 7.901377 GCTAACTAAATTTGTTTATTCTCGCGA 59.099 33.333 9.26 9.26 0.00 5.87
75 76 7.690637 TGCTAACTAAATTTGTTTATTCTCGCG 59.309 33.333 0.00 0.00 0.00 5.87
76 77 8.889849 TGCTAACTAAATTTGTTTATTCTCGC 57.110 30.769 0.00 0.00 0.00 5.03
79 80 9.639601 GGCTTGCTAACTAAATTTGTTTATTCT 57.360 29.630 0.00 0.00 0.00 2.40
80 81 8.869897 GGGCTTGCTAACTAAATTTGTTTATTC 58.130 33.333 0.00 0.00 0.00 1.75
81 82 7.544217 CGGGCTTGCTAACTAAATTTGTTTATT 59.456 33.333 0.00 0.00 0.00 1.40
82 83 7.033185 CGGGCTTGCTAACTAAATTTGTTTAT 58.967 34.615 0.00 0.00 0.00 1.40
83 84 6.207025 TCGGGCTTGCTAACTAAATTTGTTTA 59.793 34.615 0.00 0.00 0.00 2.01
84 85 5.010213 TCGGGCTTGCTAACTAAATTTGTTT 59.990 36.000 0.00 0.00 0.00 2.83
85 86 4.521256 TCGGGCTTGCTAACTAAATTTGTT 59.479 37.500 0.00 6.15 0.00 2.83
86 87 4.076394 TCGGGCTTGCTAACTAAATTTGT 58.924 39.130 0.00 0.00 0.00 2.83
87 88 4.083003 TGTCGGGCTTGCTAACTAAATTTG 60.083 41.667 0.00 0.00 0.00 2.32
88 89 4.076394 TGTCGGGCTTGCTAACTAAATTT 58.924 39.130 0.00 0.00 0.00 1.82
89 90 3.681593 TGTCGGGCTTGCTAACTAAATT 58.318 40.909 0.00 0.00 0.00 1.82
90 91 3.343941 TGTCGGGCTTGCTAACTAAAT 57.656 42.857 0.00 0.00 0.00 1.40
91 92 2.843401 TGTCGGGCTTGCTAACTAAA 57.157 45.000 0.00 0.00 0.00 1.85
92 93 2.843401 TTGTCGGGCTTGCTAACTAA 57.157 45.000 0.00 0.00 0.00 2.24
93 94 2.843401 TTTGTCGGGCTTGCTAACTA 57.157 45.000 0.00 0.00 0.00 2.24
94 95 2.084546 GATTTGTCGGGCTTGCTAACT 58.915 47.619 0.00 0.00 0.00 2.24
95 96 1.132453 GGATTTGTCGGGCTTGCTAAC 59.868 52.381 0.00 0.00 0.00 2.34
96 97 1.004277 AGGATTTGTCGGGCTTGCTAA 59.996 47.619 0.00 0.00 0.00 3.09
97 98 0.618458 AGGATTTGTCGGGCTTGCTA 59.382 50.000 0.00 0.00 0.00 3.49
98 99 0.962356 CAGGATTTGTCGGGCTTGCT 60.962 55.000 0.00 0.00 0.00 3.91
99 100 0.960364 TCAGGATTTGTCGGGCTTGC 60.960 55.000 0.00 0.00 0.00 4.01
100 101 0.804989 GTCAGGATTTGTCGGGCTTG 59.195 55.000 0.00 0.00 0.00 4.01
101 102 0.400213 TGTCAGGATTTGTCGGGCTT 59.600 50.000 0.00 0.00 0.00 4.35
102 103 0.400213 TTGTCAGGATTTGTCGGGCT 59.600 50.000 0.00 0.00 0.00 5.19
103 104 1.243902 TTTGTCAGGATTTGTCGGGC 58.756 50.000 0.00 0.00 0.00 6.13
104 105 3.067461 TGTTTTTGTCAGGATTTGTCGGG 59.933 43.478 0.00 0.00 0.00 5.14
105 106 4.300189 TGTTTTTGTCAGGATTTGTCGG 57.700 40.909 0.00 0.00 0.00 4.79
106 107 6.826893 ATTTGTTTTTGTCAGGATTTGTCG 57.173 33.333 0.00 0.00 0.00 4.35
107 108 9.914923 GTTTATTTGTTTTTGTCAGGATTTGTC 57.085 29.630 0.00 0.00 0.00 3.18
108 109 9.665719 AGTTTATTTGTTTTTGTCAGGATTTGT 57.334 25.926 0.00 0.00 0.00 2.83
109 110 9.919348 CAGTTTATTTGTTTTTGTCAGGATTTG 57.081 29.630 0.00 0.00 0.00 2.32
110 111 9.108284 CCAGTTTATTTGTTTTTGTCAGGATTT 57.892 29.630 0.00 0.00 0.00 2.17
111 112 8.482128 TCCAGTTTATTTGTTTTTGTCAGGATT 58.518 29.630 0.00 0.00 0.00 3.01
112 113 8.017418 TCCAGTTTATTTGTTTTTGTCAGGAT 57.983 30.769 0.00 0.00 0.00 3.24
113 114 7.411486 TCCAGTTTATTTGTTTTTGTCAGGA 57.589 32.000 0.00 0.00 0.00 3.86
114 115 7.925483 TCATCCAGTTTATTTGTTTTTGTCAGG 59.075 33.333 0.00 0.00 0.00 3.86
115 116 8.870160 TCATCCAGTTTATTTGTTTTTGTCAG 57.130 30.769 0.00 0.00 0.00 3.51
116 117 9.829507 ATTCATCCAGTTTATTTGTTTTTGTCA 57.170 25.926 0.00 0.00 0.00 3.58
120 121 9.949174 GCAAATTCATCCAGTTTATTTGTTTTT 57.051 25.926 0.00 0.00 38.07 1.94
121 122 8.567104 GGCAAATTCATCCAGTTTATTTGTTTT 58.433 29.630 0.00 0.00 38.07 2.43
122 123 7.718753 TGGCAAATTCATCCAGTTTATTTGTTT 59.281 29.630 0.00 0.00 38.07 2.83
123 124 7.222872 TGGCAAATTCATCCAGTTTATTTGTT 58.777 30.769 0.00 0.00 38.07 2.83
124 125 6.767456 TGGCAAATTCATCCAGTTTATTTGT 58.233 32.000 0.00 0.00 38.07 2.83
125 126 7.677747 GCATGGCAAATTCATCCAGTTTATTTG 60.678 37.037 0.00 0.00 38.55 2.32
126 127 6.316890 GCATGGCAAATTCATCCAGTTTATTT 59.683 34.615 0.00 0.00 32.78 1.40
127 128 5.818857 GCATGGCAAATTCATCCAGTTTATT 59.181 36.000 0.00 0.00 32.78 1.40
128 129 5.129815 AGCATGGCAAATTCATCCAGTTTAT 59.870 36.000 0.00 0.00 32.78 1.40
129 130 4.467082 AGCATGGCAAATTCATCCAGTTTA 59.533 37.500 0.00 0.00 32.78 2.01
130 131 3.262405 AGCATGGCAAATTCATCCAGTTT 59.738 39.130 0.00 0.00 32.78 2.66
131 132 2.835764 AGCATGGCAAATTCATCCAGTT 59.164 40.909 0.00 0.00 32.78 3.16
132 133 2.463752 AGCATGGCAAATTCATCCAGT 58.536 42.857 0.00 0.00 32.78 4.00
133 134 3.194861 CAAGCATGGCAAATTCATCCAG 58.805 45.455 0.00 0.00 32.78 3.86
134 135 2.678479 GCAAGCATGGCAAATTCATCCA 60.678 45.455 0.00 0.00 32.79 3.41
135 136 1.937899 GCAAGCATGGCAAATTCATCC 59.062 47.619 0.00 0.00 32.79 3.51
146 147 3.319755 CAAGTTTAGTTGGCAAGCATGG 58.680 45.455 0.00 0.00 0.00 3.66
147 148 2.733026 GCAAGTTTAGTTGGCAAGCATG 59.267 45.455 0.00 0.00 0.00 4.06
148 149 3.030668 GCAAGTTTAGTTGGCAAGCAT 57.969 42.857 0.00 0.00 0.00 3.79
149 150 2.507339 GCAAGTTTAGTTGGCAAGCA 57.493 45.000 0.00 0.00 0.00 3.91
155 156 4.497473 TTTCGATGGCAAGTTTAGTTGG 57.503 40.909 0.00 0.00 0.00 3.77
180 181 4.063689 TGAACGATTTGCATGGCATTTTT 58.936 34.783 0.00 0.00 38.76 1.94
181 182 3.432933 GTGAACGATTTGCATGGCATTTT 59.567 39.130 0.00 0.00 38.76 1.82
182 183 2.995258 GTGAACGATTTGCATGGCATTT 59.005 40.909 0.00 0.00 38.76 2.32
183 184 2.609350 GTGAACGATTTGCATGGCATT 58.391 42.857 0.00 0.00 38.76 3.56
184 185 1.467883 CGTGAACGATTTGCATGGCAT 60.468 47.619 0.00 0.00 43.02 4.40
185 186 0.109827 CGTGAACGATTTGCATGGCA 60.110 50.000 0.00 0.00 43.02 4.92
186 187 0.109781 ACGTGAACGATTTGCATGGC 60.110 50.000 10.26 0.00 43.02 4.40
187 188 1.196581 TCACGTGAACGATTTGCATGG 59.803 47.619 17.62 0.00 43.02 3.66
188 189 2.233355 GTCACGTGAACGATTTGCATG 58.767 47.619 21.95 0.00 43.02 4.06
189 190 1.870402 TGTCACGTGAACGATTTGCAT 59.130 42.857 21.95 0.00 43.02 3.96
190 191 1.291132 TGTCACGTGAACGATTTGCA 58.709 45.000 21.95 8.54 43.02 4.08
191 192 2.233355 CATGTCACGTGAACGATTTGC 58.767 47.619 21.95 5.66 43.02 3.68
192 193 2.233355 GCATGTCACGTGAACGATTTG 58.767 47.619 21.95 12.16 43.02 2.32
193 194 1.196808 GGCATGTCACGTGAACGATTT 59.803 47.619 21.95 0.00 43.02 2.17
194 195 0.796312 GGCATGTCACGTGAACGATT 59.204 50.000 21.95 0.27 43.02 3.34
195 196 0.037326 AGGCATGTCACGTGAACGAT 60.037 50.000 21.95 9.91 43.02 3.73
196 197 0.666274 GAGGCATGTCACGTGAACGA 60.666 55.000 21.95 7.77 43.02 3.85
197 198 1.626654 GGAGGCATGTCACGTGAACG 61.627 60.000 21.95 12.57 46.33 3.95
198 199 0.320771 AGGAGGCATGTCACGTGAAC 60.321 55.000 21.95 14.83 0.00 3.18
199 200 0.320683 CAGGAGGCATGTCACGTGAA 60.321 55.000 21.95 11.23 0.00 3.18
200 201 1.293179 CAGGAGGCATGTCACGTGA 59.707 57.895 15.76 15.76 0.00 4.35
201 202 1.742880 CCAGGAGGCATGTCACGTG 60.743 63.158 9.94 9.94 0.00 4.49
202 203 2.217038 ACCAGGAGGCATGTCACGT 61.217 57.895 0.00 0.00 39.06 4.49
203 204 1.742880 CACCAGGAGGCATGTCACG 60.743 63.158 0.00 0.00 39.06 4.35
204 205 0.036732 TTCACCAGGAGGCATGTCAC 59.963 55.000 0.00 0.00 39.06 3.67
205 206 0.036732 GTTCACCAGGAGGCATGTCA 59.963 55.000 0.00 0.00 39.06 3.58
206 207 1.021390 CGTTCACCAGGAGGCATGTC 61.021 60.000 0.00 0.00 39.06 3.06
207 208 1.003355 CGTTCACCAGGAGGCATGT 60.003 57.895 0.00 0.00 39.06 3.21
208 209 0.606401 AACGTTCACCAGGAGGCATG 60.606 55.000 0.00 0.00 39.06 4.06
209 210 0.321653 GAACGTTCACCAGGAGGCAT 60.322 55.000 23.12 0.00 39.06 4.40
210 211 1.070786 GAACGTTCACCAGGAGGCA 59.929 57.895 23.12 0.00 39.06 4.75
211 212 2.027625 CGAACGTTCACCAGGAGGC 61.028 63.158 26.71 0.00 39.06 4.70
212 213 0.388649 CTCGAACGTTCACCAGGAGG 60.389 60.000 26.71 8.93 42.21 4.30
213 214 0.388649 CCTCGAACGTTCACCAGGAG 60.389 60.000 26.71 21.76 0.00 3.69
214 215 1.663739 CCTCGAACGTTCACCAGGA 59.336 57.895 26.71 14.54 0.00 3.86
215 216 1.374252 CCCTCGAACGTTCACCAGG 60.374 63.158 26.71 24.33 0.00 4.45
216 217 0.249741 AACCCTCGAACGTTCACCAG 60.250 55.000 26.71 17.87 0.00 4.00
217 218 1.039068 TAACCCTCGAACGTTCACCA 58.961 50.000 26.71 9.88 0.00 4.17
218 219 1.997606 CATAACCCTCGAACGTTCACC 59.002 52.381 26.71 2.11 0.00 4.02
219 220 2.921754 CTCATAACCCTCGAACGTTCAC 59.078 50.000 26.71 2.88 0.00 3.18
220 221 2.094390 CCTCATAACCCTCGAACGTTCA 60.094 50.000 26.71 13.46 0.00 3.18
221 222 2.537401 CCTCATAACCCTCGAACGTTC 58.463 52.381 18.47 18.47 0.00 3.95
222 223 1.206371 CCCTCATAACCCTCGAACGTT 59.794 52.381 0.00 0.00 0.00 3.99
223 224 0.822164 CCCTCATAACCCTCGAACGT 59.178 55.000 0.00 0.00 0.00 3.99
224 225 0.822164 ACCCTCATAACCCTCGAACG 59.178 55.000 0.00 0.00 0.00 3.95
225 226 3.268330 GAAACCCTCATAACCCTCGAAC 58.732 50.000 0.00 0.00 0.00 3.95
226 227 2.237893 GGAAACCCTCATAACCCTCGAA 59.762 50.000 0.00 0.00 0.00 3.71
227 228 1.835531 GGAAACCCTCATAACCCTCGA 59.164 52.381 0.00 0.00 0.00 4.04
228 229 1.838077 AGGAAACCCTCATAACCCTCG 59.162 52.381 0.00 0.00 0.00 4.63
229 230 5.446260 TTTAGGAAACCCTCATAACCCTC 57.554 43.478 0.00 0.00 35.26 4.30
230 231 5.871324 TTTTAGGAAACCCTCATAACCCT 57.129 39.130 0.00 0.00 35.26 4.34
251 252 5.000012 TGTGTTTGTGCGGTTAGATTTTT 58.000 34.783 0.00 0.00 0.00 1.94
252 253 4.640789 TGTGTTTGTGCGGTTAGATTTT 57.359 36.364 0.00 0.00 0.00 1.82
253 254 4.846779 ATGTGTTTGTGCGGTTAGATTT 57.153 36.364 0.00 0.00 0.00 2.17
254 255 4.846779 AATGTGTTTGTGCGGTTAGATT 57.153 36.364 0.00 0.00 0.00 2.40
255 256 4.155280 GGTAATGTGTTTGTGCGGTTAGAT 59.845 41.667 0.00 0.00 0.00 1.98
256 257 3.499157 GGTAATGTGTTTGTGCGGTTAGA 59.501 43.478 0.00 0.00 0.00 2.10
257 258 3.500680 AGGTAATGTGTTTGTGCGGTTAG 59.499 43.478 0.00 0.00 0.00 2.34
258 259 3.478509 AGGTAATGTGTTTGTGCGGTTA 58.521 40.909 0.00 0.00 0.00 2.85
259 260 2.292292 GAGGTAATGTGTTTGTGCGGTT 59.708 45.455 0.00 0.00 0.00 4.44
260 261 1.877443 GAGGTAATGTGTTTGTGCGGT 59.123 47.619 0.00 0.00 0.00 5.68
261 262 2.095768 CAGAGGTAATGTGTTTGTGCGG 60.096 50.000 0.00 0.00 0.00 5.69
262 263 2.095768 CCAGAGGTAATGTGTTTGTGCG 60.096 50.000 0.00 0.00 0.00 5.34
263 264 3.146066 TCCAGAGGTAATGTGTTTGTGC 58.854 45.455 0.00 0.00 0.00 4.57
264 265 5.766150 TTTCCAGAGGTAATGTGTTTGTG 57.234 39.130 0.00 0.00 0.00 3.33
265 266 6.126409 TCTTTTCCAGAGGTAATGTGTTTGT 58.874 36.000 0.00 0.00 0.00 2.83
266 267 6.633500 TCTTTTCCAGAGGTAATGTGTTTG 57.367 37.500 0.00 0.00 0.00 2.93
267 268 7.654022 TTTCTTTTCCAGAGGTAATGTGTTT 57.346 32.000 0.00 0.00 31.12 2.83
268 269 7.654022 TTTTCTTTTCCAGAGGTAATGTGTT 57.346 32.000 0.00 0.00 31.12 3.32
269 270 7.654022 TTTTTCTTTTCCAGAGGTAATGTGT 57.346 32.000 0.00 0.00 31.12 3.72
317 318 9.043548 GCTGGGATATAGTACCCTATTTAAAGA 57.956 37.037 0.00 0.00 45.74 2.52
318 319 7.980099 CGCTGGGATATAGTACCCTATTTAAAG 59.020 40.741 0.00 0.00 45.74 1.85
319 320 7.580109 GCGCTGGGATATAGTACCCTATTTAAA 60.580 40.741 0.00 0.00 45.74 1.52
320 321 6.127253 GCGCTGGGATATAGTACCCTATTTAA 60.127 42.308 0.00 0.00 45.74 1.52
321 322 5.361857 GCGCTGGGATATAGTACCCTATTTA 59.638 44.000 0.00 0.00 45.74 1.40
322 323 4.161754 GCGCTGGGATATAGTACCCTATTT 59.838 45.833 0.00 0.00 45.74 1.40
323 324 3.705072 GCGCTGGGATATAGTACCCTATT 59.295 47.826 0.00 0.00 45.74 1.73
324 325 3.052793 AGCGCTGGGATATAGTACCCTAT 60.053 47.826 10.39 0.00 45.74 2.57
325 326 2.310945 AGCGCTGGGATATAGTACCCTA 59.689 50.000 10.39 0.00 45.74 3.53
326 327 1.077334 AGCGCTGGGATATAGTACCCT 59.923 52.381 10.39 0.00 45.74 4.34
327 328 1.558233 AGCGCTGGGATATAGTACCC 58.442 55.000 10.39 0.00 45.74 3.69
328 329 2.561419 TCAAGCGCTGGGATATAGTACC 59.439 50.000 12.58 0.00 0.00 3.34
329 330 3.936372 TCAAGCGCTGGGATATAGTAC 57.064 47.619 12.58 0.00 0.00 2.73
330 331 4.526650 TCATTCAAGCGCTGGGATATAGTA 59.473 41.667 12.58 0.00 0.00 1.82
331 332 3.324846 TCATTCAAGCGCTGGGATATAGT 59.675 43.478 12.58 0.00 0.00 2.12
332 333 3.930336 TCATTCAAGCGCTGGGATATAG 58.070 45.455 12.58 0.00 0.00 1.31
333 334 4.040339 TCTTCATTCAAGCGCTGGGATATA 59.960 41.667 12.58 0.00 31.26 0.86
334 335 2.936919 TCATTCAAGCGCTGGGATAT 57.063 45.000 12.58 6.00 0.00 1.63
335 336 2.170397 TCTTCATTCAAGCGCTGGGATA 59.830 45.455 12.58 3.83 31.26 2.59
336 337 1.065199 TCTTCATTCAAGCGCTGGGAT 60.065 47.619 12.58 4.65 31.26 3.85
337 338 0.324614 TCTTCATTCAAGCGCTGGGA 59.675 50.000 12.58 1.02 31.26 4.37
338 339 1.065102 CATCTTCATTCAAGCGCTGGG 59.935 52.381 12.58 6.88 31.26 4.45
339 340 1.065102 CCATCTTCATTCAAGCGCTGG 59.935 52.381 12.58 8.66 31.26 4.85
340 341 1.065102 CCCATCTTCATTCAAGCGCTG 59.935 52.381 12.58 5.47 31.26 5.18
341 342 1.065199 TCCCATCTTCATTCAAGCGCT 60.065 47.619 2.64 2.64 31.26 5.92
342 343 1.332997 CTCCCATCTTCATTCAAGCGC 59.667 52.381 0.00 0.00 31.26 5.92
343 344 2.611292 GACTCCCATCTTCATTCAAGCG 59.389 50.000 0.00 0.00 31.26 4.68
344 345 3.376546 GTGACTCCCATCTTCATTCAAGC 59.623 47.826 0.00 0.00 31.26 4.01
345 346 4.634883 CAGTGACTCCCATCTTCATTCAAG 59.365 45.833 0.00 0.00 0.00 3.02
346 347 4.042062 ACAGTGACTCCCATCTTCATTCAA 59.958 41.667 0.00 0.00 0.00 2.69
347 348 3.584406 ACAGTGACTCCCATCTTCATTCA 59.416 43.478 0.00 0.00 0.00 2.57
348 349 4.213564 ACAGTGACTCCCATCTTCATTC 57.786 45.455 0.00 0.00 0.00 2.67
349 350 5.491982 GTTACAGTGACTCCCATCTTCATT 58.508 41.667 0.00 0.00 0.00 2.57
350 351 4.382040 CGTTACAGTGACTCCCATCTTCAT 60.382 45.833 0.00 0.00 0.00 2.57
351 352 3.056821 CGTTACAGTGACTCCCATCTTCA 60.057 47.826 0.00 0.00 0.00 3.02
352 353 3.056749 ACGTTACAGTGACTCCCATCTTC 60.057 47.826 0.00 0.00 0.00 2.87
353 354 2.897969 ACGTTACAGTGACTCCCATCTT 59.102 45.455 0.00 0.00 0.00 2.40
354 355 2.526432 ACGTTACAGTGACTCCCATCT 58.474 47.619 0.00 0.00 0.00 2.90
355 356 3.056749 AGAACGTTACAGTGACTCCCATC 60.057 47.826 0.00 0.00 0.00 3.51
356 357 2.897969 AGAACGTTACAGTGACTCCCAT 59.102 45.455 0.00 0.00 0.00 4.00
357 358 2.313317 AGAACGTTACAGTGACTCCCA 58.687 47.619 0.00 0.00 0.00 4.37
358 359 3.057734 CAAGAACGTTACAGTGACTCCC 58.942 50.000 0.00 0.00 0.00 4.30
359 360 3.973657 TCAAGAACGTTACAGTGACTCC 58.026 45.455 0.00 0.00 0.00 3.85
360 361 7.381678 ACTTAATCAAGAACGTTACAGTGACTC 59.618 37.037 0.00 0.00 35.60 3.36
382 383 3.260884 AGGAGAAGATTGCGTTGGACTTA 59.739 43.478 0.00 0.00 0.00 2.24
495 514 1.584724 TTGGATCTGGGGAGAGGAAC 58.415 55.000 0.00 0.00 0.00 3.62
661 708 2.334295 GTAGCCGTAGCCGTAGCC 59.666 66.667 0.00 0.00 41.25 3.93
662 709 2.051525 CGTAGCCGTAGCCGTAGC 60.052 66.667 0.00 0.00 41.25 3.58
663 710 2.635899 CCGTAGCCGTAGCCGTAG 59.364 66.667 0.00 0.00 41.25 3.51
664 711 3.585990 GCCGTAGCCGTAGCCGTA 61.586 66.667 0.00 0.00 41.25 4.02
727 774 2.284478 TGCTCCTGCTCCTGCTCT 60.284 61.111 0.00 0.00 40.48 4.09
798 845 0.039437 GCGTCGACTTGAACTCCTCA 60.039 55.000 14.70 0.00 0.00 3.86
1146 1193 1.860078 GAAGAAGTGGCGGAACACG 59.140 57.895 0.00 0.00 45.80 4.49
1428 1475 1.397692 CTCTCGGACAGGTACGTCTTC 59.602 57.143 3.70 0.00 38.28 2.87
1502 1549 3.446161 TGTGCCTATACAGTAGTGACACC 59.554 47.826 4.09 0.00 0.00 4.16
1509 1556 4.937201 TCCACATGTGCCTATACAGTAG 57.063 45.455 20.81 2.25 33.44 2.57
1515 1562 5.341169 TCCATCTATCCACATGTGCCTATA 58.659 41.667 20.81 14.88 0.00 1.31
1516 1563 4.170449 TCCATCTATCCACATGTGCCTAT 58.830 43.478 20.81 14.56 0.00 2.57
1555 1602 4.853196 CGCACAGAAACAATCCAACATTAG 59.147 41.667 0.00 0.00 0.00 1.73
1559 1606 1.268999 GCGCACAGAAACAATCCAACA 60.269 47.619 0.30 0.00 0.00 3.33
1761 1823 0.998145 AGCTCCCTCTTCTTGGCATT 59.002 50.000 0.00 0.00 0.00 3.56
1919 1981 4.504916 CTCGACCCAGCAGCCGAG 62.505 72.222 3.98 3.98 41.71 4.63
1973 2035 0.384230 ATTTGTTGCAACGCGACTCG 60.384 50.000 23.79 0.00 42.88 4.18
2086 2152 8.098912 ACCTCCGTATCAAAATGTTAACTACTT 58.901 33.333 7.22 0.00 0.00 2.24
2087 2153 7.618137 ACCTCCGTATCAAAATGTTAACTACT 58.382 34.615 7.22 0.00 0.00 2.57
2088 2154 7.838771 ACCTCCGTATCAAAATGTTAACTAC 57.161 36.000 7.22 0.00 0.00 2.73
2118 2184 9.316730 CATTTCAGGTTGAATTGAAGAAAGAAA 57.683 29.630 7.55 0.00 39.02 2.52
2121 2187 8.652810 AACATTTCAGGTTGAATTGAAGAAAG 57.347 30.769 16.23 0.00 39.02 2.62
2236 2302 8.138928 TGCACATCTATGCTAAGTATATCCTT 57.861 34.615 0.00 0.00 46.28 3.36
2237 2303 7.724490 TGCACATCTATGCTAAGTATATCCT 57.276 36.000 0.00 0.00 46.28 3.24
2238 2304 8.954950 AATGCACATCTATGCTAAGTATATCC 57.045 34.615 0.00 0.00 46.28 2.59
2244 2310 9.793252 CTTTAAAAATGCACATCTATGCTAAGT 57.207 29.630 0.00 0.00 46.28 2.24
2247 2313 9.787532 GTTCTTTAAAAATGCACATCTATGCTA 57.212 29.630 0.00 0.00 46.28 3.49
2248 2314 8.526147 AGTTCTTTAAAAATGCACATCTATGCT 58.474 29.630 0.00 0.00 46.28 3.79
2249 2315 8.693542 AGTTCTTTAAAAATGCACATCTATGC 57.306 30.769 0.00 0.00 46.32 3.14
2253 2319 9.559958 CGAATAGTTCTTTAAAAATGCACATCT 57.440 29.630 0.00 0.00 0.00 2.90
2254 2320 9.554724 TCGAATAGTTCTTTAAAAATGCACATC 57.445 29.630 0.00 0.00 0.00 3.06
2256 2322 9.554724 GATCGAATAGTTCTTTAAAAATGCACA 57.445 29.630 0.00 0.00 0.00 4.57
2257 2323 9.010366 GGATCGAATAGTTCTTTAAAAATGCAC 57.990 33.333 0.00 0.00 0.00 4.57
2258 2324 8.735315 TGGATCGAATAGTTCTTTAAAAATGCA 58.265 29.630 0.00 0.00 0.00 3.96
2259 2325 9.226345 CTGGATCGAATAGTTCTTTAAAAATGC 57.774 33.333 0.00 0.00 0.00 3.56
2260 2326 9.226345 GCTGGATCGAATAGTTCTTTAAAAATG 57.774 33.333 0.00 0.00 0.00 2.32
2261 2327 8.406297 GGCTGGATCGAATAGTTCTTTAAAAAT 58.594 33.333 0.00 0.00 0.00 1.82
2262 2328 7.392113 TGGCTGGATCGAATAGTTCTTTAAAAA 59.608 33.333 0.00 0.00 0.00 1.94
2263 2329 6.882140 TGGCTGGATCGAATAGTTCTTTAAAA 59.118 34.615 0.00 0.00 0.00 1.52
2264 2330 6.411376 TGGCTGGATCGAATAGTTCTTTAAA 58.589 36.000 0.00 0.00 0.00 1.52
2265 2331 5.984725 TGGCTGGATCGAATAGTTCTTTAA 58.015 37.500 0.00 0.00 0.00 1.52
2266 2332 5.128827 ACTGGCTGGATCGAATAGTTCTTTA 59.871 40.000 0.00 0.00 0.00 1.85
2267 2333 4.080863 ACTGGCTGGATCGAATAGTTCTTT 60.081 41.667 0.00 0.00 0.00 2.52
2268 2334 3.452627 ACTGGCTGGATCGAATAGTTCTT 59.547 43.478 0.00 0.00 0.00 2.52
2269 2335 3.034635 ACTGGCTGGATCGAATAGTTCT 58.965 45.455 0.00 0.00 0.00 3.01
2270 2336 3.460857 ACTGGCTGGATCGAATAGTTC 57.539 47.619 0.00 0.00 0.00 3.01
2271 2337 3.243907 GCTACTGGCTGGATCGAATAGTT 60.244 47.826 0.00 0.00 38.06 2.24
2272 2338 2.297597 GCTACTGGCTGGATCGAATAGT 59.702 50.000 0.00 0.00 38.06 2.12
2273 2339 2.353208 GGCTACTGGCTGGATCGAATAG 60.353 54.545 0.00 0.00 41.46 1.73
2274 2340 1.618837 GGCTACTGGCTGGATCGAATA 59.381 52.381 0.00 0.00 41.46 1.75
2275 2341 0.394565 GGCTACTGGCTGGATCGAAT 59.605 55.000 0.00 0.00 41.46 3.34
2276 2342 0.975556 TGGCTACTGGCTGGATCGAA 60.976 55.000 0.00 0.00 41.46 3.71
2277 2343 0.760567 ATGGCTACTGGCTGGATCGA 60.761 55.000 0.00 0.00 41.46 3.59
2278 2344 0.320247 GATGGCTACTGGCTGGATCG 60.320 60.000 0.00 0.00 41.46 3.69
2279 2345 1.055040 AGATGGCTACTGGCTGGATC 58.945 55.000 0.00 0.00 41.46 3.36
2280 2346 1.142465 CAAGATGGCTACTGGCTGGAT 59.858 52.381 0.00 0.00 41.46 3.41
2281 2347 0.543277 CAAGATGGCTACTGGCTGGA 59.457 55.000 0.00 0.00 41.46 3.86
2282 2348 0.254178 ACAAGATGGCTACTGGCTGG 59.746 55.000 0.00 0.00 41.46 4.85
2283 2349 1.661341 GACAAGATGGCTACTGGCTG 58.339 55.000 0.00 0.00 41.46 4.85
2284 2350 0.543749 GGACAAGATGGCTACTGGCT 59.456 55.000 0.00 0.00 41.46 4.75
2285 2351 0.464554 GGGACAAGATGGCTACTGGC 60.465 60.000 0.00 0.00 40.90 4.85
2286 2352 1.207791 AGGGACAAGATGGCTACTGG 58.792 55.000 0.00 0.00 0.00 4.00
2287 2353 2.366916 CCTAGGGACAAGATGGCTACTG 59.633 54.545 0.00 0.00 0.00 2.74
2288 2354 2.683768 CCTAGGGACAAGATGGCTACT 58.316 52.381 0.00 0.00 0.00 2.57
2289 2355 1.070914 GCCTAGGGACAAGATGGCTAC 59.929 57.143 11.72 0.00 37.58 3.58
2290 2356 1.424638 GCCTAGGGACAAGATGGCTA 58.575 55.000 11.72 0.00 37.58 3.93
2291 2357 0.327000 AGCCTAGGGACAAGATGGCT 60.327 55.000 11.72 0.00 44.90 4.75
2292 2358 0.548510 AAGCCTAGGGACAAGATGGC 59.451 55.000 11.72 0.00 40.54 4.40
2293 2359 1.839994 TCAAGCCTAGGGACAAGATGG 59.160 52.381 11.72 0.00 0.00 3.51
2294 2360 3.853355 ATCAAGCCTAGGGACAAGATG 57.147 47.619 11.72 0.00 0.00 2.90
2295 2361 6.101734 TGAATTATCAAGCCTAGGGACAAGAT 59.898 38.462 11.72 5.11 30.99 2.40
2296 2362 5.428457 TGAATTATCAAGCCTAGGGACAAGA 59.572 40.000 11.72 0.00 30.99 3.02
2297 2363 5.684704 TGAATTATCAAGCCTAGGGACAAG 58.315 41.667 11.72 0.00 30.99 3.16
2298 2364 5.397899 CCTGAATTATCAAGCCTAGGGACAA 60.398 44.000 11.72 0.00 34.49 3.18
2299 2365 4.103153 CCTGAATTATCAAGCCTAGGGACA 59.897 45.833 11.72 0.00 34.49 4.02
2300 2366 4.505742 CCCTGAATTATCAAGCCTAGGGAC 60.506 50.000 11.72 0.00 36.24 4.46
2301 2367 3.652869 CCCTGAATTATCAAGCCTAGGGA 59.347 47.826 11.72 0.00 36.24 4.20
2302 2368 3.245052 CCCCTGAATTATCAAGCCTAGGG 60.245 52.174 11.72 0.00 34.74 3.53
2303 2369 3.395941 ACCCCTGAATTATCAAGCCTAGG 59.604 47.826 3.67 3.67 34.49 3.02
2304 2370 4.349342 AGACCCCTGAATTATCAAGCCTAG 59.651 45.833 0.00 0.00 34.49 3.02
2305 2371 4.103153 CAGACCCCTGAATTATCAAGCCTA 59.897 45.833 0.00 0.00 43.02 3.93
2306 2372 3.117738 CAGACCCCTGAATTATCAAGCCT 60.118 47.826 0.00 0.00 43.02 4.58
2307 2373 3.217626 CAGACCCCTGAATTATCAAGCC 58.782 50.000 0.00 0.00 43.02 4.35
2308 2374 3.217626 CCAGACCCCTGAATTATCAAGC 58.782 50.000 0.00 0.00 43.02 4.01
2309 2375 3.435601 CCCCAGACCCCTGAATTATCAAG 60.436 52.174 0.00 0.00 43.02 3.02
2310 2376 2.513738 CCCCAGACCCCTGAATTATCAA 59.486 50.000 0.00 0.00 43.02 2.57
2311 2377 2.135189 CCCCAGACCCCTGAATTATCA 58.865 52.381 0.00 0.00 43.02 2.15
2312 2378 2.106684 GTCCCCAGACCCCTGAATTATC 59.893 54.545 0.00 0.00 43.02 1.75
2313 2379 2.136026 GTCCCCAGACCCCTGAATTAT 58.864 52.381 0.00 0.00 43.02 1.28
2314 2380 1.591768 GTCCCCAGACCCCTGAATTA 58.408 55.000 0.00 0.00 43.02 1.40
2315 2381 1.562672 CGTCCCCAGACCCCTGAATT 61.563 60.000 0.00 0.00 43.02 2.17
2316 2382 1.995626 CGTCCCCAGACCCCTGAAT 60.996 63.158 0.00 0.00 43.02 2.57
2317 2383 2.606519 CGTCCCCAGACCCCTGAA 60.607 66.667 0.00 0.00 43.02 3.02
2318 2384 2.682928 TTTCGTCCCCAGACCCCTGA 62.683 60.000 0.00 0.00 43.02 3.86
2319 2385 1.562672 ATTTCGTCCCCAGACCCCTG 61.563 60.000 0.00 0.00 40.12 4.45
2320 2386 0.043637 TATTTCGTCCCCAGACCCCT 59.956 55.000 0.00 0.00 40.12 4.79
2321 2387 0.913924 TTATTTCGTCCCCAGACCCC 59.086 55.000 0.00 0.00 40.12 4.95
2322 2388 1.835531 TCTTATTTCGTCCCCAGACCC 59.164 52.381 0.00 0.00 40.12 4.46
2323 2389 3.268330 GTTCTTATTTCGTCCCCAGACC 58.732 50.000 0.00 0.00 40.12 3.85
2324 2390 3.268330 GGTTCTTATTTCGTCCCCAGAC 58.732 50.000 0.00 0.00 39.83 3.51
2325 2391 2.237893 GGGTTCTTATTTCGTCCCCAGA 59.762 50.000 0.00 0.00 0.00 3.86
2326 2392 2.026636 TGGGTTCTTATTTCGTCCCCAG 60.027 50.000 0.00 0.00 35.77 4.45
2327 2393 1.986631 TGGGTTCTTATTTCGTCCCCA 59.013 47.619 0.00 0.00 38.31 4.96
2328 2394 2.290450 TGTGGGTTCTTATTTCGTCCCC 60.290 50.000 0.00 0.00 34.54 4.81
2329 2395 3.007635 CTGTGGGTTCTTATTTCGTCCC 58.992 50.000 0.00 0.00 35.85 4.46
2330 2396 2.418976 GCTGTGGGTTCTTATTTCGTCC 59.581 50.000 0.00 0.00 0.00 4.79
2331 2397 2.093783 CGCTGTGGGTTCTTATTTCGTC 59.906 50.000 0.00 0.00 0.00 4.20
2332 2398 2.073816 CGCTGTGGGTTCTTATTTCGT 58.926 47.619 0.00 0.00 0.00 3.85
2333 2399 1.202031 GCGCTGTGGGTTCTTATTTCG 60.202 52.381 0.00 0.00 0.00 3.46
2334 2400 1.810151 TGCGCTGTGGGTTCTTATTTC 59.190 47.619 9.73 0.00 0.00 2.17
2335 2401 1.904287 TGCGCTGTGGGTTCTTATTT 58.096 45.000 9.73 0.00 0.00 1.40
2336 2402 2.017049 GATGCGCTGTGGGTTCTTATT 58.983 47.619 9.73 0.00 0.00 1.40
2337 2403 1.065491 TGATGCGCTGTGGGTTCTTAT 60.065 47.619 9.73 0.00 0.00 1.73
2338 2404 0.323302 TGATGCGCTGTGGGTTCTTA 59.677 50.000 9.73 0.00 0.00 2.10
2339 2405 0.537143 TTGATGCGCTGTGGGTTCTT 60.537 50.000 9.73 0.00 0.00 2.52
2340 2406 0.322816 ATTGATGCGCTGTGGGTTCT 60.323 50.000 9.73 0.00 0.00 3.01
2341 2407 1.378531 TATTGATGCGCTGTGGGTTC 58.621 50.000 9.73 0.00 0.00 3.62
2342 2408 2.057137 ATATTGATGCGCTGTGGGTT 57.943 45.000 9.73 0.00 0.00 4.11
2343 2409 2.928801 TATATTGATGCGCTGTGGGT 57.071 45.000 9.73 0.00 0.00 4.51
2344 2410 4.771590 ATTTATATTGATGCGCTGTGGG 57.228 40.909 9.73 0.00 0.00 4.61
2345 2411 8.071967 CCATATATTTATATTGATGCGCTGTGG 58.928 37.037 9.73 0.00 0.00 4.17
2346 2412 8.829612 TCCATATATTTATATTGATGCGCTGTG 58.170 33.333 9.73 0.00 0.00 3.66
2347 2413 8.962884 TCCATATATTTATATTGATGCGCTGT 57.037 30.769 9.73 0.00 0.00 4.40
2368 2434 9.003658 CAGACTAAAAAGAGTACATGTTTCCAT 57.996 33.333 2.30 0.00 0.00 3.41
2369 2435 7.041372 GCAGACTAAAAAGAGTACATGTTTCCA 60.041 37.037 2.30 0.00 0.00 3.53
2370 2436 7.041372 TGCAGACTAAAAAGAGTACATGTTTCC 60.041 37.037 2.30 0.00 0.00 3.13
2371 2437 7.861630 TGCAGACTAAAAAGAGTACATGTTTC 58.138 34.615 2.30 2.54 0.00 2.78
2372 2438 7.801716 TGCAGACTAAAAAGAGTACATGTTT 57.198 32.000 2.30 0.00 0.00 2.83
2373 2439 7.986085 ATGCAGACTAAAAAGAGTACATGTT 57.014 32.000 2.30 0.00 0.00 2.71
2374 2440 8.936864 GTTATGCAGACTAAAAAGAGTACATGT 58.063 33.333 2.69 2.69 0.00 3.21
2375 2441 8.391106 GGTTATGCAGACTAAAAAGAGTACATG 58.609 37.037 0.00 0.00 0.00 3.21
2376 2442 8.322091 AGGTTATGCAGACTAAAAAGAGTACAT 58.678 33.333 0.00 0.00 0.00 2.29
2377 2443 7.676947 AGGTTATGCAGACTAAAAAGAGTACA 58.323 34.615 0.00 0.00 0.00 2.90
2378 2444 8.035984 AGAGGTTATGCAGACTAAAAAGAGTAC 58.964 37.037 0.00 0.00 0.00 2.73
2379 2445 8.135382 AGAGGTTATGCAGACTAAAAAGAGTA 57.865 34.615 0.00 0.00 0.00 2.59
2380 2446 7.010339 AGAGGTTATGCAGACTAAAAAGAGT 57.990 36.000 0.00 0.00 0.00 3.24
2381 2447 7.221067 CGTAGAGGTTATGCAGACTAAAAAGAG 59.779 40.741 0.00 0.00 0.00 2.85
2382 2448 7.033791 CGTAGAGGTTATGCAGACTAAAAAGA 58.966 38.462 0.00 0.00 0.00 2.52
2383 2449 6.237861 GCGTAGAGGTTATGCAGACTAAAAAG 60.238 42.308 0.00 0.00 0.00 2.27
2384 2450 5.579511 GCGTAGAGGTTATGCAGACTAAAAA 59.420 40.000 0.00 0.00 0.00 1.94
2385 2451 5.105473 AGCGTAGAGGTTATGCAGACTAAAA 60.105 40.000 0.00 0.00 32.18 1.52
2386 2452 4.401519 AGCGTAGAGGTTATGCAGACTAAA 59.598 41.667 0.00 0.00 32.18 1.85
2387 2453 3.952323 AGCGTAGAGGTTATGCAGACTAA 59.048 43.478 0.00 0.00 32.18 2.24
2388 2454 3.552875 AGCGTAGAGGTTATGCAGACTA 58.447 45.455 0.00 0.00 32.18 2.59
2389 2455 2.379972 AGCGTAGAGGTTATGCAGACT 58.620 47.619 0.00 0.00 32.18 3.24
2390 2456 2.873133 AGCGTAGAGGTTATGCAGAC 57.127 50.000 0.00 0.00 32.18 3.51
2391 2457 3.430374 GGAAAGCGTAGAGGTTATGCAGA 60.430 47.826 0.00 0.00 40.06 4.26
2392 2458 2.866762 GGAAAGCGTAGAGGTTATGCAG 59.133 50.000 0.00 0.00 40.06 4.41
2393 2459 2.500098 AGGAAAGCGTAGAGGTTATGCA 59.500 45.455 0.00 0.00 40.06 3.96
2394 2460 2.866762 CAGGAAAGCGTAGAGGTTATGC 59.133 50.000 0.00 0.00 40.06 3.14
2395 2461 3.458189 CCAGGAAAGCGTAGAGGTTATG 58.542 50.000 0.00 0.00 40.06 1.90
2396 2462 2.434702 CCCAGGAAAGCGTAGAGGTTAT 59.565 50.000 0.00 0.00 40.06 1.89
2397 2463 1.829222 CCCAGGAAAGCGTAGAGGTTA 59.171 52.381 0.00 0.00 40.06 2.85
2398 2464 0.613777 CCCAGGAAAGCGTAGAGGTT 59.386 55.000 0.00 0.00 43.26 3.50
2399 2465 1.265454 CCCCAGGAAAGCGTAGAGGT 61.265 60.000 0.00 0.00 0.00 3.85
2400 2466 1.522569 CCCCAGGAAAGCGTAGAGG 59.477 63.158 0.00 0.00 0.00 3.69
2401 2467 1.153349 GCCCCAGGAAAGCGTAGAG 60.153 63.158 0.00 0.00 0.00 2.43
2402 2468 1.612442 AGCCCCAGGAAAGCGTAGA 60.612 57.895 0.00 0.00 0.00 2.59
2403 2469 1.450312 CAGCCCCAGGAAAGCGTAG 60.450 63.158 0.00 0.00 0.00 3.51
2404 2470 2.668632 CAGCCCCAGGAAAGCGTA 59.331 61.111 0.00 0.00 0.00 4.42
2407 2473 4.684134 TGGCAGCCCCAGGAAAGC 62.684 66.667 9.64 0.00 39.18 3.51
2415 2481 3.245264 ACAAATATAGGTATGGCAGCCCC 60.245 47.826 9.64 2.49 0.00 5.80
2416 2482 4.034285 ACAAATATAGGTATGGCAGCCC 57.966 45.455 9.64 2.42 0.00 5.19
2417 2483 5.316987 AGAACAAATATAGGTATGGCAGCC 58.683 41.667 3.66 3.66 0.00 4.85
2418 2484 6.148480 CAGAGAACAAATATAGGTATGGCAGC 59.852 42.308 0.00 0.00 0.00 5.25
2419 2485 6.652481 CCAGAGAACAAATATAGGTATGGCAG 59.348 42.308 0.00 0.00 0.00 4.85
2420 2486 6.533730 CCAGAGAACAAATATAGGTATGGCA 58.466 40.000 0.00 0.00 0.00 4.92
2421 2487 5.412904 GCCAGAGAACAAATATAGGTATGGC 59.587 44.000 0.00 0.00 41.22 4.40
2422 2488 6.428159 GTGCCAGAGAACAAATATAGGTATGG 59.572 42.308 0.00 0.00 0.00 2.74
2423 2489 7.220030 AGTGCCAGAGAACAAATATAGGTATG 58.780 38.462 0.00 0.00 0.00 2.39
2424 2490 7.380423 AGTGCCAGAGAACAAATATAGGTAT 57.620 36.000 0.00 0.00 0.00 2.73
2425 2491 6.808321 AGTGCCAGAGAACAAATATAGGTA 57.192 37.500 0.00 0.00 0.00 3.08
2426 2492 5.700402 AGTGCCAGAGAACAAATATAGGT 57.300 39.130 0.00 0.00 0.00 3.08
2427 2493 6.582636 TGTAGTGCCAGAGAACAAATATAGG 58.417 40.000 0.00 0.00 0.00 2.57
2428 2494 7.981789 TCTTGTAGTGCCAGAGAACAAATATAG 59.018 37.037 0.00 0.00 30.30 1.31
2429 2495 7.847096 TCTTGTAGTGCCAGAGAACAAATATA 58.153 34.615 0.00 0.00 30.30 0.86
2430 2496 6.711277 TCTTGTAGTGCCAGAGAACAAATAT 58.289 36.000 0.00 0.00 30.30 1.28
2431 2497 6.109156 TCTTGTAGTGCCAGAGAACAAATA 57.891 37.500 0.00 0.00 30.30 1.40
2432 2498 4.973168 TCTTGTAGTGCCAGAGAACAAAT 58.027 39.130 0.00 0.00 30.30 2.32
2433 2499 4.415881 TCTTGTAGTGCCAGAGAACAAA 57.584 40.909 0.00 0.00 30.30 2.83
2434 2500 4.415881 TTCTTGTAGTGCCAGAGAACAA 57.584 40.909 0.00 0.00 0.00 2.83
2435 2501 4.623932 ATTCTTGTAGTGCCAGAGAACA 57.376 40.909 0.00 0.00 0.00 3.18
2436 2502 4.154918 CCAATTCTTGTAGTGCCAGAGAAC 59.845 45.833 0.00 0.00 0.00 3.01
2437 2503 4.202461 ACCAATTCTTGTAGTGCCAGAGAA 60.202 41.667 0.00 0.00 0.00 2.87
2438 2504 3.327757 ACCAATTCTTGTAGTGCCAGAGA 59.672 43.478 0.00 0.00 0.00 3.10
2439 2505 3.679389 ACCAATTCTTGTAGTGCCAGAG 58.321 45.455 0.00 0.00 0.00 3.35
2440 2506 3.674997 GACCAATTCTTGTAGTGCCAGA 58.325 45.455 0.00 0.00 0.00 3.86
2441 2507 2.416547 CGACCAATTCTTGTAGTGCCAG 59.583 50.000 0.00 0.00 0.00 4.85
2442 2508 2.224426 ACGACCAATTCTTGTAGTGCCA 60.224 45.455 0.00 0.00 0.00 4.92
2443 2509 2.423577 ACGACCAATTCTTGTAGTGCC 58.576 47.619 0.00 0.00 0.00 5.01
2444 2510 5.600908 TTTACGACCAATTCTTGTAGTGC 57.399 39.130 0.00 0.00 0.00 4.40
2445 2511 7.596749 AGATTTACGACCAATTCTTGTAGTG 57.403 36.000 0.00 0.00 0.00 2.74
2446 2512 8.699283 GTAGATTTACGACCAATTCTTGTAGT 57.301 34.615 0.00 0.00 0.00 2.73
2462 2528 8.483307 TTGGTCTTAAATGGTCGTAGATTTAC 57.517 34.615 0.00 0.00 40.67 2.01
2463 2529 9.675464 AATTGGTCTTAAATGGTCGTAGATTTA 57.325 29.630 0.00 0.00 40.67 1.40
2464 2530 8.458843 CAATTGGTCTTAAATGGTCGTAGATTT 58.541 33.333 0.00 0.00 40.67 2.17
2465 2531 7.067008 CCAATTGGTCTTAAATGGTCGTAGATT 59.933 37.037 16.90 0.00 40.67 2.40
2466 2532 6.542370 CCAATTGGTCTTAAATGGTCGTAGAT 59.458 38.462 16.90 0.00 40.67 1.98
2467 2533 5.878116 CCAATTGGTCTTAAATGGTCGTAGA 59.122 40.000 16.90 0.00 0.00 2.59
2468 2534 6.119144 CCAATTGGTCTTAAATGGTCGTAG 57.881 41.667 16.90 0.00 0.00 3.51
2484 2550 3.052036 CGAACAGCTTTTGACCAATTGG 58.948 45.455 23.31 23.31 42.17 3.16
2485 2551 3.963665 TCGAACAGCTTTTGACCAATTG 58.036 40.909 0.00 0.00 0.00 2.32
2486 2552 3.004734 CCTCGAACAGCTTTTGACCAATT 59.995 43.478 0.00 0.00 0.00 2.32
2487 2553 2.554032 CCTCGAACAGCTTTTGACCAAT 59.446 45.455 0.00 0.00 0.00 3.16
2488 2554 1.946768 CCTCGAACAGCTTTTGACCAA 59.053 47.619 0.00 0.00 0.00 3.67
2489 2555 1.140052 TCCTCGAACAGCTTTTGACCA 59.860 47.619 0.00 0.00 0.00 4.02
2490 2556 1.801178 CTCCTCGAACAGCTTTTGACC 59.199 52.381 0.00 0.00 0.00 4.02
2491 2557 1.195674 GCTCCTCGAACAGCTTTTGAC 59.804 52.381 7.82 0.00 32.48 3.18
2492 2558 1.070758 AGCTCCTCGAACAGCTTTTGA 59.929 47.619 11.22 0.00 43.80 2.69
2493 2559 1.462670 GAGCTCCTCGAACAGCTTTTG 59.537 52.381 16.77 0.00 46.31 2.44
2494 2560 1.346068 AGAGCTCCTCGAACAGCTTTT 59.654 47.619 16.77 7.90 46.31 2.27
2495 2561 0.972883 AGAGCTCCTCGAACAGCTTT 59.027 50.000 16.77 10.09 46.31 3.51
2496 2562 1.840737 TAGAGCTCCTCGAACAGCTT 58.159 50.000 16.77 10.51 46.31 3.74
2498 2564 1.470112 GGTTAGAGCTCCTCGAACAGC 60.470 57.143 10.93 7.10 44.10 4.40
2499 2565 1.819288 TGGTTAGAGCTCCTCGAACAG 59.181 52.381 10.93 0.00 44.10 3.16
2500 2566 1.919240 TGGTTAGAGCTCCTCGAACA 58.081 50.000 10.93 0.00 44.10 3.18
2501 2567 3.528597 AATGGTTAGAGCTCCTCGAAC 57.471 47.619 10.93 9.70 42.49 3.95
2502 2568 4.253685 CAAAATGGTTAGAGCTCCTCGAA 58.746 43.478 10.93 0.00 35.36 3.71
2503 2569 3.369471 CCAAAATGGTTAGAGCTCCTCGA 60.369 47.826 10.93 0.00 31.97 4.04
2504 2570 2.939103 CCAAAATGGTTAGAGCTCCTCG 59.061 50.000 10.93 0.00 31.97 4.63
2517 2583 3.244976 GCGACATTTCTGACCAAAATGG 58.755 45.455 11.86 0.00 44.62 3.16
2518 2584 3.899734 TGCGACATTTCTGACCAAAATG 58.100 40.909 6.96 6.96 45.40 2.32
2519 2585 4.582701 TTGCGACATTTCTGACCAAAAT 57.417 36.364 0.00 0.00 0.00 1.82
2520 2586 4.582701 ATTGCGACATTTCTGACCAAAA 57.417 36.364 0.00 0.00 0.00 2.44
2521 2587 4.582701 AATTGCGACATTTCTGACCAAA 57.417 36.364 0.00 0.00 0.00 3.28
2522 2588 4.582701 AAATTGCGACATTTCTGACCAA 57.417 36.364 0.00 0.00 0.00 3.67
2523 2589 4.582701 AAAATTGCGACATTTCTGACCA 57.417 36.364 0.00 0.00 0.00 4.02
2551 2617 6.691788 GCAGTCTGCTTTACGACCATTTCG 62.692 50.000 17.89 0.00 46.48 3.46
2552 2618 3.424962 GCAGTCTGCTTTACGACCATTTC 60.425 47.826 17.89 0.00 40.96 2.17
2553 2619 2.484264 GCAGTCTGCTTTACGACCATTT 59.516 45.455 17.89 0.00 40.96 2.32
2554 2620 2.076863 GCAGTCTGCTTTACGACCATT 58.923 47.619 17.89 0.00 40.96 3.16
2555 2621 1.001974 TGCAGTCTGCTTTACGACCAT 59.998 47.619 24.76 0.00 45.31 3.55
2556 2622 0.391228 TGCAGTCTGCTTTACGACCA 59.609 50.000 24.76 0.00 45.31 4.02
2557 2623 0.790814 GTGCAGTCTGCTTTACGACC 59.209 55.000 24.76 0.52 45.31 4.79
2558 2624 1.457303 CAGTGCAGTCTGCTTTACGAC 59.543 52.381 24.76 13.60 45.31 4.34
2559 2625 1.605457 CCAGTGCAGTCTGCTTTACGA 60.605 52.381 24.76 1.06 45.31 3.43
2560 2626 0.792640 CCAGTGCAGTCTGCTTTACG 59.207 55.000 24.76 11.13 45.31 3.18
2561 2627 1.801178 GACCAGTGCAGTCTGCTTTAC 59.199 52.381 24.76 15.00 45.31 2.01
2562 2628 1.270839 GGACCAGTGCAGTCTGCTTTA 60.271 52.381 24.76 2.63 45.31 1.85
2563 2629 0.536006 GGACCAGTGCAGTCTGCTTT 60.536 55.000 24.76 10.70 45.31 3.51
2564 2630 1.072159 GGACCAGTGCAGTCTGCTT 59.928 57.895 24.76 11.06 45.31 3.91
2565 2631 1.825281 GAGGACCAGTGCAGTCTGCT 61.825 60.000 24.76 4.74 45.31 4.24
2566 2632 1.375268 GAGGACCAGTGCAGTCTGC 60.375 63.158 18.32 18.32 45.29 4.26
2567 2633 1.080230 CGAGGACCAGTGCAGTCTG 60.080 63.158 4.76 0.00 34.56 3.51
2568 2634 0.827925 TTCGAGGACCAGTGCAGTCT 60.828 55.000 4.76 0.00 34.56 3.24
2569 2635 0.667792 GTTCGAGGACCAGTGCAGTC 60.668 60.000 0.00 0.00 0.00 3.51
2570 2636 1.367840 GTTCGAGGACCAGTGCAGT 59.632 57.895 0.00 0.00 0.00 4.40
2571 2637 0.036952 ATGTTCGAGGACCAGTGCAG 60.037 55.000 0.00 0.00 0.00 4.41
2572 2638 0.320683 CATGTTCGAGGACCAGTGCA 60.321 55.000 0.00 0.00 0.00 4.57
2573 2639 1.021390 CCATGTTCGAGGACCAGTGC 61.021 60.000 0.00 0.00 0.00 4.40
2574 2640 0.608130 TCCATGTTCGAGGACCAGTG 59.392 55.000 0.00 0.00 0.00 3.66
2575 2641 1.208052 CATCCATGTTCGAGGACCAGT 59.792 52.381 0.00 0.00 36.60 4.00
2576 2642 1.945387 CATCCATGTTCGAGGACCAG 58.055 55.000 0.00 0.00 36.60 4.00
2577 2643 0.107703 GCATCCATGTTCGAGGACCA 60.108 55.000 0.00 0.00 36.60 4.02
2578 2644 0.107703 TGCATCCATGTTCGAGGACC 60.108 55.000 0.00 0.00 36.60 4.46
2579 2645 1.959042 ATGCATCCATGTTCGAGGAC 58.041 50.000 0.00 0.00 36.60 3.85
2580 2646 2.093021 TCAATGCATCCATGTTCGAGGA 60.093 45.455 0.00 0.00 38.50 3.71
2581 2647 2.291365 TCAATGCATCCATGTTCGAGG 58.709 47.619 0.00 0.00 0.00 4.63
2582 2648 5.410439 TCATATCAATGCATCCATGTTCGAG 59.590 40.000 0.00 0.00 32.76 4.04
2583 2649 5.179929 GTCATATCAATGCATCCATGTTCGA 59.820 40.000 0.00 0.00 32.76 3.71
2584 2650 5.180680 AGTCATATCAATGCATCCATGTTCG 59.819 40.000 0.00 0.00 32.76 3.95
2585 2651 6.379386 CAGTCATATCAATGCATCCATGTTC 58.621 40.000 0.00 1.02 32.76 3.18
2586 2652 5.243060 CCAGTCATATCAATGCATCCATGTT 59.757 40.000 0.00 0.00 32.76 2.71
2587 2653 4.765339 CCAGTCATATCAATGCATCCATGT 59.235 41.667 0.00 0.00 32.76 3.21
2588 2654 5.007682 TCCAGTCATATCAATGCATCCATG 58.992 41.667 0.00 1.65 32.76 3.66
2589 2655 5.008331 GTCCAGTCATATCAATGCATCCAT 58.992 41.667 0.00 0.00 32.76 3.41
2590 2656 4.392047 GTCCAGTCATATCAATGCATCCA 58.608 43.478 0.00 0.00 32.76 3.41
2630 2696 1.425412 AAATGACACGACACGTAGGC 58.575 50.000 0.00 0.00 38.32 3.93
2641 2707 6.208644 AGTGACACATAAGCAAAAATGACAC 58.791 36.000 8.59 0.00 0.00 3.67
2697 2764 0.109723 ACGGGAGCCACTTTTTGCTA 59.890 50.000 0.00 0.00 38.11 3.49
2706 2985 4.083862 GAGTCCCACGGGAGCCAC 62.084 72.222 4.63 0.00 46.16 5.01
2728 3007 1.779569 ACAAGACTTAGACGTTGCCG 58.220 50.000 0.00 0.00 40.83 5.69
2730 3009 5.919141 TCTCTAAACAAGACTTAGACGTTGC 59.081 40.000 0.00 0.00 33.04 4.17
2739 3018 7.391148 TTGTTTGCTTCTCTAAACAAGACTT 57.609 32.000 10.23 0.00 46.12 3.01
2745 3024 4.338118 CCTGGTTGTTTGCTTCTCTAAACA 59.662 41.667 0.00 0.00 42.96 2.83
2761 3040 0.110486 AAGTGGTGGTAGCCTGGTTG 59.890 55.000 0.00 0.00 0.00 3.77
2762 3041 0.850784 AAAGTGGTGGTAGCCTGGTT 59.149 50.000 0.00 0.00 0.00 3.67
2779 3058 0.519519 CGCGCTACCCAATCAACAAA 59.480 50.000 5.56 0.00 0.00 2.83
2783 3062 3.192230 CGCGCGCTACCCAATCAA 61.192 61.111 30.48 0.00 0.00 2.57
2832 3111 2.281208 CGTCCGAACAAGGCCCAA 60.281 61.111 0.00 0.00 0.00 4.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.