Multiple sequence alignment - TraesCS1A01G060500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G060500 chr1A 100.000 3045 0 0 1 3045 41711135 41714179 0.000000e+00 5624.0
1 TraesCS1A01G060500 chr1A 100.000 448 0 0 3341 3788 41714475 41714922 0.000000e+00 828.0
2 TraesCS1A01G060500 chr1A 90.000 240 21 3 3381 3617 9754812 9754573 1.320000e-79 307.0
3 TraesCS1A01G060500 chr1A 100.000 33 0 0 2997 3029 41714096 41714128 1.140000e-05 62.1
4 TraesCS1A01G060500 chr1A 100.000 33 0 0 2962 2994 41714131 41714163 1.140000e-05 62.1
5 TraesCS1A01G060500 chr1D 95.817 2032 64 6 969 3000 41596776 41598786 0.000000e+00 3262.0
6 TraesCS1A01G060500 chr1D 93.625 502 26 2 466 966 41596200 41596696 0.000000e+00 745.0
7 TraesCS1A01G060500 chr1D 89.600 375 22 10 46 414 41595484 41595847 9.590000e-126 460.0
8 TraesCS1A01G060500 chr1B 95.047 2039 87 4 969 3000 61667164 61669195 0.000000e+00 3193.0
9 TraesCS1A01G060500 chr1B 86.216 370 26 16 69 429 61640210 61640563 9.930000e-101 377.0
10 TraesCS1A01G060500 chr1B 89.286 168 15 1 687 851 61666845 61667012 1.380000e-49 207.0
11 TraesCS1A01G060500 chr7D 93.493 292 4 3 3381 3657 509154763 509155054 1.630000e-113 420.0
12 TraesCS1A01G060500 chr7D 97.531 81 2 0 3708 3788 509155154 509155234 5.100000e-29 139.0
13 TraesCS1A01G060500 chr7D 100.000 41 0 0 3652 3692 509155066 509155106 4.060000e-10 76.8
14 TraesCS1A01G060500 chr5B 93.103 290 5 3 3383 3657 660816650 660816939 9.790000e-111 411.0
15 TraesCS1A01G060500 chr7A 91.409 291 10 3 3381 3656 10975359 10975069 5.940000e-103 385.0
16 TraesCS1A01G060500 chr7A 91.463 82 7 0 3707 3788 10974963 10974882 3.090000e-21 113.0
17 TraesCS1A01G060500 chr3A 92.917 240 14 3 3381 3617 155056127 155055888 2.800000e-91 346.0
18 TraesCS1A01G060500 chr7B 92.405 237 16 2 3383 3617 64558742 64558506 1.690000e-88 337.0
19 TraesCS1A01G060500 chr7B 92.683 82 6 0 3707 3788 64558354 64558273 6.650000e-23 119.0
20 TraesCS1A01G060500 chr2D 92.373 236 12 2 3381 3615 87840569 87840799 7.840000e-87 331.0
21 TraesCS1A01G060500 chr2D 94.366 142 7 1 3381 3521 282947211 282947070 2.290000e-52 217.0
22 TraesCS1A01G060500 chr2D 95.192 104 4 1 3515 3617 282940349 282940246 3.030000e-36 163.0
23 TraesCS1A01G060500 chr2D 92.683 82 6 0 3707 3788 87840953 87841034 6.650000e-23 119.0
24 TraesCS1A01G060500 chr5A 91.489 188 9 7 3435 3617 546820849 546821034 6.280000e-63 252.0
25 TraesCS1A01G060500 chr6B 96.341 82 3 0 3707 3788 550824815 550824734 6.600000e-28 135.0
26 TraesCS1A01G060500 chr4A 70.570 649 155 27 1439 2066 4621037 4620404 1.440000e-19 108.0
27 TraesCS1A01G060500 chr4D 74.899 247 55 7 1436 1676 465969535 465969780 5.170000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G060500 chr1A 41711135 41714922 3787 False 1644.05 5624 100.0000 1 3788 4 chr1A.!!$F1 3787
1 TraesCS1A01G060500 chr1D 41595484 41598786 3302 False 1489.00 3262 93.0140 46 3000 3 chr1D.!!$F1 2954
2 TraesCS1A01G060500 chr1B 61666845 61669195 2350 False 1700.00 3193 92.1665 687 3000 2 chr1B.!!$F2 2313

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
480 788 0.462047 GGATTCACATCCGGCGAAGT 60.462 55.000 9.30 0.0 39.93 3.01 F
597 905 0.882042 CACATGGGCCTCATCTACGC 60.882 60.000 4.53 0.0 32.92 4.42 F
2124 2571 1.154225 CACGCCCAATTCGTTGAGC 60.154 57.895 0.00 0.0 38.19 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2061 2508 0.105593 GAATCTCCATCGCAGGCTCA 59.894 55.0 0.00 0.0 0.00 4.26 R
2169 2616 0.676466 CCACAAACGCCATGGCTCTA 60.676 55.0 33.07 0.0 39.32 2.43 R
3667 4114 0.031010 AGAGCCGGGGAATAGAAGGT 60.031 55.0 2.18 0.0 0.00 3.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.205515 ACTCATATTTGGGTCTCAAGAATCT 57.794 36.000 0.00 0.00 26.77 2.40
25 26 7.637511 ACTCATATTTGGGTCTCAAGAATCTT 58.362 34.615 0.00 0.00 26.77 2.40
26 27 8.112183 ACTCATATTTGGGTCTCAAGAATCTTT 58.888 33.333 0.00 0.00 26.77 2.52
27 28 8.511604 TCATATTTGGGTCTCAAGAATCTTTC 57.488 34.615 0.00 0.00 36.62 2.62
28 29 7.557719 TCATATTTGGGTCTCAAGAATCTTTCC 59.442 37.037 0.00 0.00 36.62 3.13
29 30 3.721087 TGGGTCTCAAGAATCTTTCCC 57.279 47.619 12.33 12.33 34.77 3.97
30 31 2.027192 TGGGTCTCAAGAATCTTTCCCG 60.027 50.000 13.54 0.00 36.75 5.14
31 32 2.027100 GGGTCTCAAGAATCTTTCCCGT 60.027 50.000 0.00 0.00 0.00 5.28
32 33 3.197116 GGGTCTCAAGAATCTTTCCCGTA 59.803 47.826 0.00 0.00 0.00 4.02
33 34 4.182339 GGTCTCAAGAATCTTTCCCGTAC 58.818 47.826 0.00 0.00 0.00 3.67
34 35 4.322499 GGTCTCAAGAATCTTTCCCGTACA 60.322 45.833 0.00 0.00 0.00 2.90
35 36 5.420409 GTCTCAAGAATCTTTCCCGTACAT 58.580 41.667 0.00 0.00 0.00 2.29
36 37 5.875359 GTCTCAAGAATCTTTCCCGTACATT 59.125 40.000 0.00 0.00 0.00 2.71
37 38 6.371825 GTCTCAAGAATCTTTCCCGTACATTT 59.628 38.462 0.00 0.00 0.00 2.32
38 39 6.940298 TCTCAAGAATCTTTCCCGTACATTTT 59.060 34.615 0.00 0.00 0.00 1.82
39 40 6.908825 TCAAGAATCTTTCCCGTACATTTTG 58.091 36.000 0.00 0.00 0.00 2.44
40 41 6.488683 TCAAGAATCTTTCCCGTACATTTTGT 59.511 34.615 0.00 0.00 0.00 2.83
41 42 6.894339 AGAATCTTTCCCGTACATTTTGTT 57.106 33.333 0.00 0.00 0.00 2.83
42 43 7.284919 AGAATCTTTCCCGTACATTTTGTTT 57.715 32.000 0.00 0.00 0.00 2.83
43 44 7.368059 AGAATCTTTCCCGTACATTTTGTTTC 58.632 34.615 0.00 0.00 0.00 2.78
44 45 6.642707 ATCTTTCCCGTACATTTTGTTTCA 57.357 33.333 0.00 0.00 0.00 2.69
58 59 9.558396 ACATTTTGTTTCATTGTTTGATGGTAT 57.442 25.926 0.00 0.00 33.34 2.73
63 64 9.482627 TTGTTTCATTGTTTGATGGTATAAACC 57.517 29.630 0.00 0.00 46.98 3.27
100 101 3.545366 TGTGCACTACTAACAACACCA 57.455 42.857 19.41 0.00 0.00 4.17
104 105 3.812609 TGCACTACTAACAACACCATGTG 59.187 43.478 0.00 0.00 39.75 3.21
115 116 9.720667 CTAACAACACCATGTGATAAATATGTG 57.279 33.333 0.49 0.00 36.96 3.21
140 147 6.708285 ACATATGATGCAGCAGATGAGATTA 58.292 36.000 37.67 12.76 39.25 1.75
141 148 6.594547 ACATATGATGCAGCAGATGAGATTAC 59.405 38.462 37.67 0.00 39.25 1.89
168 175 7.445402 ACATATCAGGAAAAATCCATCTAACCG 59.555 37.037 0.00 0.00 0.00 4.44
169 176 4.523083 TCAGGAAAAATCCATCTAACCGG 58.477 43.478 0.00 0.00 0.00 5.28
194 201 4.080863 AGTGCATCGAATAATAGATCCCCC 60.081 45.833 0.00 0.00 0.00 5.40
259 266 3.183259 GCTAACGGCCGCATCAAA 58.817 55.556 28.58 3.05 34.27 2.69
280 287 7.609056 TCAAACATTAGTAACACTAGTCCTCC 58.391 38.462 0.00 0.00 31.47 4.30
283 290 7.549147 ACATTAGTAACACTAGTCCTCCAAA 57.451 36.000 0.00 0.00 31.47 3.28
292 299 7.133133 ACACTAGTCCTCCAAACTAGAAAAA 57.867 36.000 15.24 0.00 45.99 1.94
295 302 6.990939 ACTAGTCCTCCAAACTAGAAAAACAC 59.009 38.462 15.24 0.00 45.99 3.32
305 312 8.713271 CCAAACTAGAAAAACACACTCTATCTC 58.287 37.037 0.00 0.00 0.00 2.75
312 319 9.030452 AGAAAAACACACTCTATCTCTATCTGT 57.970 33.333 0.00 0.00 0.00 3.41
415 422 4.208686 GAGGGCGCAGGGTACGAG 62.209 72.222 10.83 0.00 0.00 4.18
421 428 4.509737 GCAGGGTACGAGGCGGAC 62.510 72.222 0.00 0.00 40.38 4.79
422 429 3.066190 CAGGGTACGAGGCGGACA 61.066 66.667 4.46 0.00 43.28 4.02
423 430 2.754658 AGGGTACGAGGCGGACAG 60.755 66.667 4.46 0.00 43.28 3.51
424 431 2.753043 GGGTACGAGGCGGACAGA 60.753 66.667 4.46 0.00 43.28 3.41
425 432 2.772691 GGGTACGAGGCGGACAGAG 61.773 68.421 4.46 0.00 43.28 3.35
426 433 2.772691 GGTACGAGGCGGACAGAGG 61.773 68.421 4.46 0.00 43.28 3.69
427 434 2.439701 TACGAGGCGGACAGAGGG 60.440 66.667 0.00 0.00 0.00 4.30
430 437 3.706373 GAGGCGGACAGAGGGCAA 61.706 66.667 0.00 0.00 0.00 4.52
431 438 3.672295 GAGGCGGACAGAGGGCAAG 62.672 68.421 0.00 0.00 0.00 4.01
432 439 4.785453 GGCGGACAGAGGGCAAGG 62.785 72.222 0.00 0.00 0.00 3.61
433 440 4.785453 GCGGACAGAGGGCAAGGG 62.785 72.222 0.00 0.00 0.00 3.95
434 441 4.785453 CGGACAGAGGGCAAGGGC 62.785 72.222 0.00 0.00 40.13 5.19
435 442 4.785453 GGACAGAGGGCAAGGGCG 62.785 72.222 0.00 0.00 42.47 6.13
480 788 0.462047 GGATTCACATCCGGCGAAGT 60.462 55.000 9.30 0.00 39.93 3.01
484 792 2.100631 CACATCCGGCGAAGTCACC 61.101 63.158 9.30 0.00 0.00 4.02
531 839 2.072298 CAGCGAGGAAAGAGAAACTGG 58.928 52.381 0.00 0.00 0.00 4.00
532 840 1.971357 AGCGAGGAAAGAGAAACTGGA 59.029 47.619 0.00 0.00 0.00 3.86
533 841 2.070028 GCGAGGAAAGAGAAACTGGAC 58.930 52.381 0.00 0.00 0.00 4.02
534 842 2.289133 GCGAGGAAAGAGAAACTGGACT 60.289 50.000 0.00 0.00 0.00 3.85
535 843 3.321497 CGAGGAAAGAGAAACTGGACTG 58.679 50.000 0.00 0.00 0.00 3.51
549 857 3.118738 ACTGGACTGTCGTTGAAGAACTT 60.119 43.478 1.07 0.00 0.00 2.66
562 870 2.244946 GAACTTGTCGTTCTGGGGC 58.755 57.895 0.00 0.00 46.74 5.80
597 905 0.882042 CACATGGGCCTCATCTACGC 60.882 60.000 4.53 0.00 32.92 4.42
641 949 2.549754 CCAGCATTGTTCAGTCTCGTTT 59.450 45.455 0.00 0.00 0.00 3.60
644 952 4.211164 CAGCATTGTTCAGTCTCGTTTGTA 59.789 41.667 0.00 0.00 0.00 2.41
668 976 3.066760 CCCTTTTTCGAAGCAAGTCAACT 59.933 43.478 14.68 0.00 0.00 3.16
744 1052 3.911868 TCATTCAAGTTTTCATTGGGCG 58.088 40.909 0.00 0.00 0.00 6.13
777 1085 5.939447 TGCCTCAAATTCATTTTCCCTTTT 58.061 33.333 0.00 0.00 0.00 2.27
843 1154 5.931441 AGGAGAAGTTTGAATTCGTTCTG 57.069 39.130 13.74 0.00 0.00 3.02
853 1164 4.311606 TGAATTCGTTCTGTTCGGATCAA 58.688 39.130 0.04 0.00 0.00 2.57
911 1273 6.558488 AATTTGGGCAGCCTTTGATATTTA 57.442 33.333 12.43 0.00 0.00 1.40
957 1319 6.773976 TCTTTTTGGGTATATCCTTTGCTG 57.226 37.500 3.09 0.00 36.25 4.41
958 1320 5.127031 TCTTTTTGGGTATATCCTTTGCTGC 59.873 40.000 3.09 0.00 36.25 5.25
959 1321 3.951563 TTGGGTATATCCTTTGCTGCT 57.048 42.857 3.09 0.00 36.25 4.24
1182 1629 4.101448 CCCACCTTGGCCTCCTCG 62.101 72.222 3.32 0.00 35.79 4.63
1680 2127 2.335369 GACGATATGCTCCGCCGT 59.665 61.111 0.00 0.00 36.08 5.68
1819 2266 4.675933 CGGACATAATCACCTACAACGTCA 60.676 45.833 0.00 0.00 0.00 4.35
1857 2304 2.202892 GAAGGGCGGGTCGATGAC 60.203 66.667 0.00 0.00 0.00 3.06
1941 2388 1.846007 TTGTGTTGAAGGGCTTGTGT 58.154 45.000 0.00 0.00 0.00 3.72
2061 2508 1.299976 GTGCCGGAGAGGATTGGTT 59.700 57.895 5.05 0.00 45.00 3.67
2124 2571 1.154225 CACGCCCAATTCGTTGAGC 60.154 57.895 0.00 0.00 38.19 4.26
2169 2616 4.084287 TCTGCAAGCAAAAGAAGATGGAT 58.916 39.130 0.00 0.00 0.00 3.41
2287 2734 1.237285 GGTTGATGCCGCTGTTGAGT 61.237 55.000 0.00 0.00 0.00 3.41
2460 2907 5.460419 CACTTACTCGACAATATCTTCTGGC 59.540 44.000 0.00 0.00 0.00 4.85
2589 3036 1.851658 GCAAAAGGCGTGAAACACAT 58.148 45.000 0.00 0.00 35.74 3.21
2610 3057 6.363626 CACATAGTGCTATCGATCTGTTTACC 59.636 42.308 0.00 0.00 0.00 2.85
2649 3096 0.447801 GCATGCCAAACGAATCGACT 59.552 50.000 10.55 0.00 0.00 4.18
2679 3126 7.946776 ACTATATTGATTGAAGGCTTGGCTTAT 59.053 33.333 3.46 1.02 0.00 1.73
2846 3293 0.539051 GGAGTGTGTGGATCCAGGAG 59.461 60.000 16.81 0.00 33.08 3.69
2885 3332 4.590850 TCGGCAGTACGTAGAGATACTA 57.409 45.455 0.00 0.00 30.36 1.82
2886 3333 4.948847 TCGGCAGTACGTAGAGATACTAA 58.051 43.478 0.00 0.00 32.49 2.24
2925 3372 3.918591 TCTTATTCGACGCTGTGTTCTTC 59.081 43.478 0.00 0.00 0.00 2.87
2987 3434 3.594134 CTCCTCCAGTTCAACTTGCTAG 58.406 50.000 0.00 0.00 0.00 3.42
3000 3447 5.236478 TCAACTTGCTAGAAACTTGTACAGC 59.764 40.000 1.04 0.00 0.00 4.40
3001 3448 4.065789 ACTTGCTAGAAACTTGTACAGCC 58.934 43.478 1.04 0.00 0.00 4.85
3002 3449 4.202367 ACTTGCTAGAAACTTGTACAGCCT 60.202 41.667 1.04 0.00 0.00 4.58
3003 3450 3.926616 TGCTAGAAACTTGTACAGCCTC 58.073 45.455 0.00 0.00 0.00 4.70
3004 3451 3.263261 GCTAGAAACTTGTACAGCCTCC 58.737 50.000 0.00 0.00 0.00 4.30
3005 3452 3.055747 GCTAGAAACTTGTACAGCCTCCT 60.056 47.826 0.00 0.00 0.00 3.69
3006 3453 3.686916 AGAAACTTGTACAGCCTCCTC 57.313 47.619 0.00 0.00 0.00 3.71
3007 3454 2.303311 AGAAACTTGTACAGCCTCCTCC 59.697 50.000 0.00 0.00 0.00 4.30
3008 3455 1.729586 AACTTGTACAGCCTCCTCCA 58.270 50.000 0.00 0.00 0.00 3.86
3009 3456 1.270907 ACTTGTACAGCCTCCTCCAG 58.729 55.000 0.00 0.00 0.00 3.86
3010 3457 1.270907 CTTGTACAGCCTCCTCCAGT 58.729 55.000 0.00 0.00 0.00 4.00
3011 3458 1.625818 CTTGTACAGCCTCCTCCAGTT 59.374 52.381 0.00 0.00 0.00 3.16
3012 3459 1.267121 TGTACAGCCTCCTCCAGTTC 58.733 55.000 0.00 0.00 0.00 3.01
3013 3460 1.267121 GTACAGCCTCCTCCAGTTCA 58.733 55.000 0.00 0.00 0.00 3.18
3014 3461 1.623811 GTACAGCCTCCTCCAGTTCAA 59.376 52.381 0.00 0.00 0.00 2.69
3015 3462 0.398318 ACAGCCTCCTCCAGTTCAAC 59.602 55.000 0.00 0.00 0.00 3.18
3016 3463 0.689623 CAGCCTCCTCCAGTTCAACT 59.310 55.000 0.00 0.00 0.00 3.16
3017 3464 1.072965 CAGCCTCCTCCAGTTCAACTT 59.927 52.381 0.00 0.00 0.00 2.66
3018 3465 1.072965 AGCCTCCTCCAGTTCAACTTG 59.927 52.381 0.00 0.00 0.00 3.16
3019 3466 1.528129 CCTCCTCCAGTTCAACTTGC 58.472 55.000 0.00 0.00 0.00 4.01
3020 3467 1.072965 CCTCCTCCAGTTCAACTTGCT 59.927 52.381 0.00 0.00 0.00 3.91
3021 3468 2.303022 CCTCCTCCAGTTCAACTTGCTA 59.697 50.000 0.00 0.00 0.00 3.49
3022 3469 3.594134 CTCCTCCAGTTCAACTTGCTAG 58.406 50.000 0.00 0.00 0.00 3.42
3023 3470 3.239449 TCCTCCAGTTCAACTTGCTAGA 58.761 45.455 1.04 0.00 0.00 2.43
3024 3471 3.646162 TCCTCCAGTTCAACTTGCTAGAA 59.354 43.478 1.04 0.00 0.00 2.10
3025 3472 4.102524 TCCTCCAGTTCAACTTGCTAGAAA 59.897 41.667 1.04 0.00 0.00 2.52
3026 3473 4.214332 CCTCCAGTTCAACTTGCTAGAAAC 59.786 45.833 1.04 3.81 0.00 2.78
3027 3474 5.036117 TCCAGTTCAACTTGCTAGAAACT 57.964 39.130 1.04 5.95 0.00 2.66
3028 3475 5.437060 TCCAGTTCAACTTGCTAGAAACTT 58.563 37.500 1.04 0.00 0.00 2.66
3029 3476 5.527582 TCCAGTTCAACTTGCTAGAAACTTC 59.472 40.000 1.04 0.00 0.00 3.01
3030 3477 5.435557 CAGTTCAACTTGCTAGAAACTTCG 58.564 41.667 1.04 0.00 0.00 3.79
3031 3478 5.006746 CAGTTCAACTTGCTAGAAACTTCGT 59.993 40.000 1.04 0.00 0.00 3.85
3032 3479 5.585047 AGTTCAACTTGCTAGAAACTTCGTT 59.415 36.000 1.04 0.00 0.00 3.85
3033 3480 6.093633 AGTTCAACTTGCTAGAAACTTCGTTT 59.906 34.615 1.04 0.00 38.54 3.60
3034 3481 6.431198 TCAACTTGCTAGAAACTTCGTTTT 57.569 33.333 1.04 0.00 35.77 2.43
3035 3482 6.848451 TCAACTTGCTAGAAACTTCGTTTTT 58.152 32.000 1.04 0.00 35.77 1.94
3359 3806 3.319198 GGGACGCCTCACCCTCAA 61.319 66.667 0.00 0.00 42.56 3.02
3360 3807 2.747686 GGACGCCTCACCCTCAAA 59.252 61.111 0.00 0.00 0.00 2.69
3361 3808 1.072505 GGACGCCTCACCCTCAAAA 59.927 57.895 0.00 0.00 0.00 2.44
3362 3809 0.536460 GGACGCCTCACCCTCAAAAA 60.536 55.000 0.00 0.00 0.00 1.94
3384 3831 3.728076 AAAGAAAAGAAAAGGGACGCC 57.272 42.857 0.00 0.00 0.00 5.68
3385 3832 2.658807 AGAAAAGAAAAGGGACGCCT 57.341 45.000 0.00 0.00 0.00 5.52
3386 3833 2.505405 AGAAAAGAAAAGGGACGCCTC 58.495 47.619 0.00 0.00 0.00 4.70
3387 3834 1.540267 GAAAAGAAAAGGGACGCCTCC 59.460 52.381 0.00 0.00 35.50 4.30
3388 3835 0.771755 AAAGAAAAGGGACGCCTCCT 59.228 50.000 1.57 0.00 36.68 3.69
3389 3836 0.325272 AAGAAAAGGGACGCCTCCTC 59.675 55.000 1.57 0.00 36.68 3.71
3390 3837 0.836400 AGAAAAGGGACGCCTCCTCA 60.836 55.000 1.57 0.00 36.68 3.86
3391 3838 0.036306 GAAAAGGGACGCCTCCTCAA 59.964 55.000 1.57 0.00 36.68 3.02
3392 3839 0.036875 AAAAGGGACGCCTCCTCAAG 59.963 55.000 1.57 0.00 36.68 3.02
3393 3840 2.470938 AAAGGGACGCCTCCTCAAGC 62.471 60.000 1.57 0.00 36.68 4.01
3399 3846 4.475135 GCCTCCTCAAGCGACCCC 62.475 72.222 0.00 0.00 0.00 4.95
3400 3847 3.003173 CCTCCTCAAGCGACCCCA 61.003 66.667 0.00 0.00 0.00 4.96
3401 3848 2.266055 CTCCTCAAGCGACCCCAC 59.734 66.667 0.00 0.00 0.00 4.61
3402 3849 3.316573 CTCCTCAAGCGACCCCACC 62.317 68.421 0.00 0.00 0.00 4.61
3403 3850 3.322466 CCTCAAGCGACCCCACCT 61.322 66.667 0.00 0.00 0.00 4.00
3404 3851 2.266055 CTCAAGCGACCCCACCTC 59.734 66.667 0.00 0.00 0.00 3.85
3405 3852 3.649277 CTCAAGCGACCCCACCTCG 62.649 68.421 0.00 0.00 0.00 4.63
3425 3872 4.519437 CTCCCGATGCTGCGCTGA 62.519 66.667 19.32 3.71 0.00 4.26
3426 3873 4.819761 TCCCGATGCTGCGCTGAC 62.820 66.667 19.32 9.87 0.00 3.51
3428 3875 3.857854 CCGATGCTGCGCTGACAC 61.858 66.667 19.32 6.70 0.00 3.67
3429 3876 3.857854 CGATGCTGCGCTGACACC 61.858 66.667 19.32 5.78 0.00 4.16
3430 3877 2.435586 GATGCTGCGCTGACACCT 60.436 61.111 19.32 1.87 0.00 4.00
3431 3878 2.435586 ATGCTGCGCTGACACCTC 60.436 61.111 19.32 0.00 0.00 3.85
3432 3879 3.965539 ATGCTGCGCTGACACCTCC 62.966 63.158 19.32 0.00 0.00 4.30
3433 3880 4.385405 GCTGCGCTGACACCTCCT 62.385 66.667 19.32 0.00 0.00 3.69
3434 3881 2.125753 CTGCGCTGACACCTCCTC 60.126 66.667 9.73 0.00 0.00 3.71
3435 3882 3.655810 CTGCGCTGACACCTCCTCC 62.656 68.421 9.73 0.00 0.00 4.30
3436 3883 4.459089 GCGCTGACACCTCCTCCC 62.459 72.222 0.00 0.00 0.00 4.30
3437 3884 3.775654 CGCTGACACCTCCTCCCC 61.776 72.222 0.00 0.00 0.00 4.81
3438 3885 2.284995 GCTGACACCTCCTCCCCT 60.285 66.667 0.00 0.00 0.00 4.79
3439 3886 1.920835 GCTGACACCTCCTCCCCTT 60.921 63.158 0.00 0.00 0.00 3.95
3440 3887 1.904990 GCTGACACCTCCTCCCCTTC 61.905 65.000 0.00 0.00 0.00 3.46
3441 3888 0.252467 CTGACACCTCCTCCCCTTCT 60.252 60.000 0.00 0.00 0.00 2.85
3442 3889 0.252284 TGACACCTCCTCCCCTTCTC 60.252 60.000 0.00 0.00 0.00 2.87
3443 3890 0.041982 GACACCTCCTCCCCTTCTCT 59.958 60.000 0.00 0.00 0.00 3.10
3444 3891 0.041982 ACACCTCCTCCCCTTCTCTC 59.958 60.000 0.00 0.00 0.00 3.20
3445 3892 0.041833 CACCTCCTCCCCTTCTCTCA 59.958 60.000 0.00 0.00 0.00 3.27
3446 3893 0.041982 ACCTCCTCCCCTTCTCTCAC 59.958 60.000 0.00 0.00 0.00 3.51
3447 3894 1.040339 CCTCCTCCCCTTCTCTCACG 61.040 65.000 0.00 0.00 0.00 4.35
3448 3895 1.000486 TCCTCCCCTTCTCTCACGG 60.000 63.158 0.00 0.00 0.00 4.94
3449 3896 2.726351 CCTCCCCTTCTCTCACGGC 61.726 68.421 0.00 0.00 0.00 5.68
3450 3897 2.683933 TCCCCTTCTCTCACGGCC 60.684 66.667 0.00 0.00 0.00 6.13
3451 3898 2.685380 CCCCTTCTCTCACGGCCT 60.685 66.667 0.00 0.00 0.00 5.19
3452 3899 2.726351 CCCCTTCTCTCACGGCCTC 61.726 68.421 0.00 0.00 0.00 4.70
3453 3900 1.684049 CCCTTCTCTCACGGCCTCT 60.684 63.158 0.00 0.00 0.00 3.69
3454 3901 0.395862 CCCTTCTCTCACGGCCTCTA 60.396 60.000 0.00 0.00 0.00 2.43
3455 3902 0.741915 CCTTCTCTCACGGCCTCTAC 59.258 60.000 0.00 0.00 0.00 2.59
3456 3903 1.464734 CTTCTCTCACGGCCTCTACA 58.535 55.000 0.00 0.00 0.00 2.74
3457 3904 1.819288 CTTCTCTCACGGCCTCTACAA 59.181 52.381 0.00 0.00 0.00 2.41
3458 3905 1.464734 TCTCTCACGGCCTCTACAAG 58.535 55.000 0.00 0.00 0.00 3.16
3459 3906 0.179124 CTCTCACGGCCTCTACAAGC 60.179 60.000 0.00 0.00 0.00 4.01
3460 3907 0.898326 TCTCACGGCCTCTACAAGCA 60.898 55.000 0.00 0.00 0.00 3.91
3461 3908 0.176680 CTCACGGCCTCTACAAGCAT 59.823 55.000 0.00 0.00 0.00 3.79
3462 3909 0.175760 TCACGGCCTCTACAAGCATC 59.824 55.000 0.00 0.00 0.00 3.91
3463 3910 0.811616 CACGGCCTCTACAAGCATCC 60.812 60.000 0.00 0.00 0.00 3.51
3464 3911 1.592669 CGGCCTCTACAAGCATCCG 60.593 63.158 0.00 0.00 0.00 4.18
3465 3912 1.889573 GGCCTCTACAAGCATCCGC 60.890 63.158 0.00 0.00 38.99 5.54
3466 3913 1.153369 GCCTCTACAAGCATCCGCA 60.153 57.895 0.00 0.00 42.27 5.69
3467 3914 0.744414 GCCTCTACAAGCATCCGCAA 60.744 55.000 0.00 0.00 42.27 4.85
3468 3915 1.737838 CCTCTACAAGCATCCGCAAA 58.262 50.000 0.00 0.00 42.27 3.68
3469 3916 2.292267 CCTCTACAAGCATCCGCAAAT 58.708 47.619 0.00 0.00 42.27 2.32
3470 3917 2.289002 CCTCTACAAGCATCCGCAAATC 59.711 50.000 0.00 0.00 42.27 2.17
3471 3918 3.201290 CTCTACAAGCATCCGCAAATCT 58.799 45.455 0.00 0.00 42.27 2.40
3472 3919 3.609853 TCTACAAGCATCCGCAAATCTT 58.390 40.909 0.00 0.00 42.27 2.40
3473 3920 2.927553 ACAAGCATCCGCAAATCTTC 57.072 45.000 0.00 0.00 42.27 2.87
3474 3921 1.474077 ACAAGCATCCGCAAATCTTCC 59.526 47.619 0.00 0.00 42.27 3.46
3475 3922 1.106285 AAGCATCCGCAAATCTTCCC 58.894 50.000 0.00 0.00 42.27 3.97
3476 3923 0.257039 AGCATCCGCAAATCTTCCCT 59.743 50.000 0.00 0.00 42.27 4.20
3477 3924 0.665298 GCATCCGCAAATCTTCCCTC 59.335 55.000 0.00 0.00 38.36 4.30
3478 3925 1.748591 GCATCCGCAAATCTTCCCTCT 60.749 52.381 0.00 0.00 38.36 3.69
3479 3926 2.216898 CATCCGCAAATCTTCCCTCTC 58.783 52.381 0.00 0.00 0.00 3.20
3480 3927 0.541863 TCCGCAAATCTTCCCTCTCC 59.458 55.000 0.00 0.00 0.00 3.71
3481 3928 0.464554 CCGCAAATCTTCCCTCTCCC 60.465 60.000 0.00 0.00 0.00 4.30
3482 3929 0.253044 CGCAAATCTTCCCTCTCCCA 59.747 55.000 0.00 0.00 0.00 4.37
3483 3930 1.133976 CGCAAATCTTCCCTCTCCCAT 60.134 52.381 0.00 0.00 0.00 4.00
3484 3931 2.104792 CGCAAATCTTCCCTCTCCCATA 59.895 50.000 0.00 0.00 0.00 2.74
3485 3932 3.433598 CGCAAATCTTCCCTCTCCCATAA 60.434 47.826 0.00 0.00 0.00 1.90
3486 3933 4.734266 GCAAATCTTCCCTCTCCCATAAT 58.266 43.478 0.00 0.00 0.00 1.28
3487 3934 4.764308 GCAAATCTTCCCTCTCCCATAATC 59.236 45.833 0.00 0.00 0.00 1.75
3488 3935 5.457342 GCAAATCTTCCCTCTCCCATAATCT 60.457 44.000 0.00 0.00 0.00 2.40
3489 3936 6.237154 CAAATCTTCCCTCTCCCATAATCTC 58.763 44.000 0.00 0.00 0.00 2.75
3490 3937 3.863086 TCTTCCCTCTCCCATAATCTCC 58.137 50.000 0.00 0.00 0.00 3.71
3491 3938 3.472848 TCTTCCCTCTCCCATAATCTCCT 59.527 47.826 0.00 0.00 0.00 3.69
3492 3939 3.266477 TCCCTCTCCCATAATCTCCTG 57.734 52.381 0.00 0.00 0.00 3.86
3493 3940 2.524440 TCCCTCTCCCATAATCTCCTGT 59.476 50.000 0.00 0.00 0.00 4.00
3494 3941 3.051032 TCCCTCTCCCATAATCTCCTGTT 60.051 47.826 0.00 0.00 0.00 3.16
3495 3942 3.718956 CCCTCTCCCATAATCTCCTGTTT 59.281 47.826 0.00 0.00 0.00 2.83
3496 3943 4.166919 CCCTCTCCCATAATCTCCTGTTTT 59.833 45.833 0.00 0.00 0.00 2.43
3497 3944 5.128919 CCTCTCCCATAATCTCCTGTTTTG 58.871 45.833 0.00 0.00 0.00 2.44
3498 3945 4.526970 TCTCCCATAATCTCCTGTTTTGC 58.473 43.478 0.00 0.00 0.00 3.68
3499 3946 3.631250 TCCCATAATCTCCTGTTTTGCC 58.369 45.455 0.00 0.00 0.00 4.52
3500 3947 3.269381 TCCCATAATCTCCTGTTTTGCCT 59.731 43.478 0.00 0.00 0.00 4.75
3501 3948 3.633986 CCCATAATCTCCTGTTTTGCCTC 59.366 47.826 0.00 0.00 0.00 4.70
3502 3949 4.530875 CCATAATCTCCTGTTTTGCCTCT 58.469 43.478 0.00 0.00 0.00 3.69
3503 3950 4.578105 CCATAATCTCCTGTTTTGCCTCTC 59.422 45.833 0.00 0.00 0.00 3.20
3504 3951 3.795688 AATCTCCTGTTTTGCCTCTCA 57.204 42.857 0.00 0.00 0.00 3.27
3505 3952 3.795688 ATCTCCTGTTTTGCCTCTCAA 57.204 42.857 0.00 0.00 0.00 3.02
3506 3953 3.795688 TCTCCTGTTTTGCCTCTCAAT 57.204 42.857 0.00 0.00 34.12 2.57
3507 3954 3.679389 TCTCCTGTTTTGCCTCTCAATC 58.321 45.455 0.00 0.00 34.12 2.67
3508 3955 3.072915 TCTCCTGTTTTGCCTCTCAATCA 59.927 43.478 0.00 0.00 34.12 2.57
3509 3956 3.149196 TCCTGTTTTGCCTCTCAATCAC 58.851 45.455 0.00 0.00 34.12 3.06
3510 3957 2.095567 CCTGTTTTGCCTCTCAATCACG 60.096 50.000 0.00 0.00 34.12 4.35
3511 3958 2.807967 CTGTTTTGCCTCTCAATCACGA 59.192 45.455 0.00 0.00 34.12 4.35
3512 3959 3.210227 TGTTTTGCCTCTCAATCACGAA 58.790 40.909 0.00 0.00 34.12 3.85
3513 3960 3.820467 TGTTTTGCCTCTCAATCACGAAT 59.180 39.130 0.00 0.00 34.12 3.34
3514 3961 4.083324 TGTTTTGCCTCTCAATCACGAATC 60.083 41.667 0.00 0.00 34.12 2.52
3515 3962 3.333029 TTGCCTCTCAATCACGAATCA 57.667 42.857 0.00 0.00 0.00 2.57
3516 3963 2.897436 TGCCTCTCAATCACGAATCAG 58.103 47.619 0.00 0.00 0.00 2.90
3517 3964 2.208431 GCCTCTCAATCACGAATCAGG 58.792 52.381 0.00 0.00 0.00 3.86
3518 3965 2.159043 GCCTCTCAATCACGAATCAGGA 60.159 50.000 0.00 0.00 0.00 3.86
3519 3966 3.494048 GCCTCTCAATCACGAATCAGGAT 60.494 47.826 0.00 0.00 0.00 3.24
3520 3967 4.305769 CCTCTCAATCACGAATCAGGATC 58.694 47.826 0.00 0.00 0.00 3.36
3521 3968 4.305769 CTCTCAATCACGAATCAGGATCC 58.694 47.826 2.48 2.48 0.00 3.36
3522 3969 3.706086 TCTCAATCACGAATCAGGATCCA 59.294 43.478 15.82 0.00 0.00 3.41
3523 3970 4.346127 TCTCAATCACGAATCAGGATCCAT 59.654 41.667 15.82 0.00 0.00 3.41
3524 3971 4.383173 TCAATCACGAATCAGGATCCATG 58.617 43.478 15.82 9.58 0.00 3.66
3525 3972 2.916702 TCACGAATCAGGATCCATGG 57.083 50.000 15.82 4.97 0.00 3.66
3526 3973 2.397597 TCACGAATCAGGATCCATGGA 58.602 47.619 18.88 18.88 0.00 3.41
3527 3974 2.366590 TCACGAATCAGGATCCATGGAG 59.633 50.000 21.33 6.48 0.00 3.86
3528 3975 1.696336 ACGAATCAGGATCCATGGAGG 59.304 52.381 21.33 9.65 39.47 4.30
3529 3976 1.696336 CGAATCAGGATCCATGGAGGT 59.304 52.381 21.33 3.64 39.02 3.85
3530 3977 2.105477 CGAATCAGGATCCATGGAGGTT 59.895 50.000 21.33 8.81 39.02 3.50
3531 3978 3.434167 CGAATCAGGATCCATGGAGGTTT 60.434 47.826 21.33 2.32 39.02 3.27
3532 3979 3.872459 ATCAGGATCCATGGAGGTTTC 57.128 47.619 21.33 12.43 39.02 2.78
3533 3980 1.846439 TCAGGATCCATGGAGGTTTCC 59.154 52.381 21.33 20.80 44.31 3.13
3542 3989 2.244946 GGAGGTTTCCGACAAGTGC 58.755 57.895 0.00 0.00 32.79 4.40
3543 3990 0.250338 GGAGGTTTCCGACAAGTGCT 60.250 55.000 0.00 0.00 32.79 4.40
3544 3991 1.001633 GGAGGTTTCCGACAAGTGCTA 59.998 52.381 0.00 0.00 32.79 3.49
3545 3992 2.067013 GAGGTTTCCGACAAGTGCTAC 58.933 52.381 0.00 0.00 0.00 3.58
3546 3993 1.692519 AGGTTTCCGACAAGTGCTACT 59.307 47.619 0.00 0.00 0.00 2.57
3547 3994 2.067013 GGTTTCCGACAAGTGCTACTC 58.933 52.381 0.00 0.00 0.00 2.59
3548 3995 1.719780 GTTTCCGACAAGTGCTACTCG 59.280 52.381 0.00 0.00 0.00 4.18
3549 3996 1.241165 TTCCGACAAGTGCTACTCGA 58.759 50.000 0.00 0.00 0.00 4.04
3550 3997 1.460504 TCCGACAAGTGCTACTCGAT 58.539 50.000 0.00 0.00 0.00 3.59
3551 3998 1.400846 TCCGACAAGTGCTACTCGATC 59.599 52.381 0.00 0.00 0.00 3.69
3552 3999 1.402259 CCGACAAGTGCTACTCGATCT 59.598 52.381 0.00 0.00 0.00 2.75
3553 4000 2.445316 CGACAAGTGCTACTCGATCTG 58.555 52.381 0.00 0.00 0.00 2.90
3554 4001 2.189342 GACAAGTGCTACTCGATCTGC 58.811 52.381 0.00 0.00 0.00 4.26
3555 4002 1.821753 ACAAGTGCTACTCGATCTGCT 59.178 47.619 0.00 0.00 0.00 4.24
3556 4003 3.017442 ACAAGTGCTACTCGATCTGCTA 58.983 45.455 0.00 0.00 0.00 3.49
3557 4004 3.634448 ACAAGTGCTACTCGATCTGCTAT 59.366 43.478 0.00 0.00 0.00 2.97
3558 4005 4.822350 ACAAGTGCTACTCGATCTGCTATA 59.178 41.667 0.00 0.00 0.00 1.31
3559 4006 5.150683 CAAGTGCTACTCGATCTGCTATAC 58.849 45.833 0.00 0.00 0.00 1.47
3560 4007 3.433957 AGTGCTACTCGATCTGCTATACG 59.566 47.826 0.00 0.00 0.00 3.06
3561 4008 2.742589 TGCTACTCGATCTGCTATACGG 59.257 50.000 0.00 0.00 0.00 4.02
3562 4009 2.476519 GCTACTCGATCTGCTATACGGC 60.477 54.545 0.00 0.00 0.00 5.68
3563 4010 1.605753 ACTCGATCTGCTATACGGCA 58.394 50.000 0.00 0.00 40.15 5.69
3598 4045 4.778415 CCGTGGGTCTGCGTCTCG 62.778 72.222 0.00 0.00 0.00 4.04
3609 4056 2.804167 CGTCTCGCTGCTCATCCT 59.196 61.111 0.00 0.00 0.00 3.24
3610 4057 1.299014 CGTCTCGCTGCTCATCCTC 60.299 63.158 0.00 0.00 0.00 3.71
3611 4058 1.299014 GTCTCGCTGCTCATCCTCG 60.299 63.158 0.00 0.00 0.00 4.63
3612 4059 2.027314 CTCGCTGCTCATCCTCGG 59.973 66.667 0.00 0.00 0.00 4.63
3613 4060 3.496875 CTCGCTGCTCATCCTCGGG 62.497 68.421 0.00 0.00 0.00 5.14
3614 4061 3.531207 CGCTGCTCATCCTCGGGA 61.531 66.667 0.00 0.00 35.55 5.14
3615 4062 2.420890 GCTGCTCATCCTCGGGAG 59.579 66.667 0.00 0.00 34.05 4.30
3631 4078 2.430367 AGGGAACTCGGTGTTGGC 59.570 61.111 0.00 0.00 39.30 4.52
3632 4079 3.047877 GGGAACTCGGTGTTGGCG 61.048 66.667 0.00 0.00 39.30 5.69
3633 4080 2.029964 GGAACTCGGTGTTGGCGA 59.970 61.111 0.00 0.00 39.30 5.54
3634 4081 2.027625 GGAACTCGGTGTTGGCGAG 61.028 63.158 0.00 0.00 39.30 5.03
3635 4082 2.027625 GAACTCGGTGTTGGCGAGG 61.028 63.158 0.00 0.00 39.30 4.63
3636 4083 2.710724 GAACTCGGTGTTGGCGAGGT 62.711 60.000 0.00 0.00 39.30 3.85
3637 4084 2.030562 CTCGGTGTTGGCGAGGTT 59.969 61.111 0.00 0.00 0.00 3.50
3638 4085 2.027625 CTCGGTGTTGGCGAGGTTC 61.028 63.158 0.00 0.00 0.00 3.62
3639 4086 3.047877 CGGTGTTGGCGAGGTTCC 61.048 66.667 0.00 0.00 0.00 3.62
3640 4087 2.112297 GGTGTTGGCGAGGTTCCA 59.888 61.111 0.00 0.00 0.00 3.53
3641 4088 1.303317 GGTGTTGGCGAGGTTCCAT 60.303 57.895 0.00 0.00 32.92 3.41
3642 4089 1.586154 GGTGTTGGCGAGGTTCCATG 61.586 60.000 0.00 0.00 32.92 3.66
3643 4090 1.303236 TGTTGGCGAGGTTCCATGG 60.303 57.895 4.97 4.97 32.92 3.66
3644 4091 1.002624 GTTGGCGAGGTTCCATGGA 60.003 57.895 11.44 11.44 32.92 3.41
3645 4092 1.026718 GTTGGCGAGGTTCCATGGAG 61.027 60.000 15.53 3.89 32.92 3.86
3646 4093 1.488705 TTGGCGAGGTTCCATGGAGT 61.489 55.000 15.53 3.63 32.92 3.85
3647 4094 1.450312 GGCGAGGTTCCATGGAGTG 60.450 63.158 15.53 5.55 0.00 3.51
3648 4095 2.109126 GCGAGGTTCCATGGAGTGC 61.109 63.158 15.53 11.66 0.00 4.40
3649 4096 1.450312 CGAGGTTCCATGGAGTGCC 60.450 63.158 15.53 17.55 0.00 5.01
3671 4118 2.990479 GGGGACGAGCATGACCTT 59.010 61.111 0.00 0.00 0.00 3.50
3672 4119 1.153349 GGGGACGAGCATGACCTTC 60.153 63.158 0.00 0.00 0.00 3.46
3673 4120 1.617947 GGGGACGAGCATGACCTTCT 61.618 60.000 0.00 0.00 0.00 2.85
3674 4121 1.112113 GGGACGAGCATGACCTTCTA 58.888 55.000 0.00 0.00 0.00 2.10
3675 4122 1.689273 GGGACGAGCATGACCTTCTAT 59.311 52.381 0.00 0.00 0.00 1.98
3676 4123 2.103263 GGGACGAGCATGACCTTCTATT 59.897 50.000 0.00 0.00 0.00 1.73
3677 4124 3.385577 GGACGAGCATGACCTTCTATTC 58.614 50.000 0.00 0.00 0.00 1.75
3678 4125 3.385577 GACGAGCATGACCTTCTATTCC 58.614 50.000 0.00 0.00 0.00 3.01
3679 4126 2.103263 ACGAGCATGACCTTCTATTCCC 59.897 50.000 0.00 0.00 0.00 3.97
3680 4127 2.548920 CGAGCATGACCTTCTATTCCCC 60.549 54.545 0.00 0.00 0.00 4.81
3681 4128 1.417890 AGCATGACCTTCTATTCCCCG 59.582 52.381 0.00 0.00 0.00 5.73
3682 4129 1.543429 GCATGACCTTCTATTCCCCGG 60.543 57.143 0.00 0.00 0.00 5.73
3683 4130 0.765510 ATGACCTTCTATTCCCCGGC 59.234 55.000 0.00 0.00 0.00 6.13
3684 4131 0.326238 TGACCTTCTATTCCCCGGCT 60.326 55.000 0.00 0.00 0.00 5.52
3685 4132 0.393448 GACCTTCTATTCCCCGGCTC 59.607 60.000 0.00 0.00 0.00 4.70
3686 4133 0.031010 ACCTTCTATTCCCCGGCTCT 60.031 55.000 0.00 0.00 0.00 4.09
3687 4134 1.132500 CCTTCTATTCCCCGGCTCTT 58.868 55.000 0.00 0.00 0.00 2.85
3688 4135 1.070914 CCTTCTATTCCCCGGCTCTTC 59.929 57.143 0.00 0.00 0.00 2.87
3689 4136 1.762957 CTTCTATTCCCCGGCTCTTCA 59.237 52.381 0.00 0.00 0.00 3.02
3690 4137 1.120530 TCTATTCCCCGGCTCTTCAC 58.879 55.000 0.00 0.00 0.00 3.18
3691 4138 0.106894 CTATTCCCCGGCTCTTCACC 59.893 60.000 0.00 0.00 0.00 4.02
3698 4145 3.319198 GGCTCTTCACCGACCCCA 61.319 66.667 0.00 0.00 0.00 4.96
3699 4146 2.266055 GCTCTTCACCGACCCCAG 59.734 66.667 0.00 0.00 0.00 4.45
3700 4147 2.982130 CTCTTCACCGACCCCAGG 59.018 66.667 0.00 0.00 0.00 4.45
3701 4148 1.609501 CTCTTCACCGACCCCAGGA 60.610 63.158 0.00 0.00 0.00 3.86
3702 4149 1.152204 TCTTCACCGACCCCAGGAA 60.152 57.895 0.00 0.00 0.00 3.36
3703 4150 1.192146 TCTTCACCGACCCCAGGAAG 61.192 60.000 0.00 0.00 37.03 3.46
3704 4151 1.152204 TTCACCGACCCCAGGAAGA 60.152 57.895 0.00 0.00 0.00 2.87
3705 4152 0.546747 TTCACCGACCCCAGGAAGAT 60.547 55.000 0.00 0.00 0.00 2.40
3706 4153 0.976073 TCACCGACCCCAGGAAGATC 60.976 60.000 0.00 0.00 0.00 2.75
3707 4154 2.058595 ACCGACCCCAGGAAGATCG 61.059 63.158 0.00 0.00 0.00 3.69
3708 4155 1.756950 CCGACCCCAGGAAGATCGA 60.757 63.158 0.00 0.00 34.77 3.59
3709 4156 1.115930 CCGACCCCAGGAAGATCGAT 61.116 60.000 0.00 0.00 34.77 3.59
3710 4157 0.032678 CGACCCCAGGAAGATCGATG 59.967 60.000 0.54 0.00 34.77 3.84
3711 4158 1.414158 GACCCCAGGAAGATCGATGA 58.586 55.000 0.54 0.00 0.00 2.92
3712 4159 1.974236 GACCCCAGGAAGATCGATGAT 59.026 52.381 0.54 0.00 0.00 2.45
3713 4160 1.696336 ACCCCAGGAAGATCGATGATG 59.304 52.381 0.54 0.00 0.00 3.07
3714 4161 1.002888 CCCCAGGAAGATCGATGATGG 59.997 57.143 0.54 3.35 0.00 3.51
3715 4162 1.002888 CCCAGGAAGATCGATGATGGG 59.997 57.143 0.54 9.00 39.96 4.00
3716 4163 1.002888 CCAGGAAGATCGATGATGGGG 59.997 57.143 0.54 0.00 0.00 4.96
3717 4164 1.973515 CAGGAAGATCGATGATGGGGA 59.026 52.381 0.54 0.00 0.00 4.81
3718 4165 2.570752 CAGGAAGATCGATGATGGGGAT 59.429 50.000 0.54 0.00 0.00 3.85
3719 4166 2.836981 AGGAAGATCGATGATGGGGATC 59.163 50.000 0.54 0.00 37.44 3.36
3720 4167 2.417924 GGAAGATCGATGATGGGGATCG 60.418 54.545 0.54 0.00 43.32 3.69
3724 4171 0.318441 TCGATGATGGGGATCGAAGC 59.682 55.000 0.00 0.00 46.54 3.86
3725 4172 1.010935 CGATGATGGGGATCGAAGCG 61.011 60.000 0.00 0.00 44.46 4.68
3726 4173 1.294659 GATGATGGGGATCGAAGCGC 61.295 60.000 0.00 0.00 0.00 5.92
3727 4174 2.666526 GATGGGGATCGAAGCGCC 60.667 66.667 2.29 15.14 38.71 6.53
3728 4175 4.609018 ATGGGGATCGAAGCGCCG 62.609 66.667 2.29 0.45 40.91 6.46
3738 4185 4.722700 AAGCGCCGGTGCTCCAAT 62.723 61.111 40.42 23.95 46.60 3.16
3744 4191 2.819595 CGGTGCTCCAATCCGGTG 60.820 66.667 0.00 0.00 40.49 4.94
3745 4192 2.438434 GGTGCTCCAATCCGGTGG 60.438 66.667 0.00 2.26 40.33 4.61
3746 4193 2.668632 GTGCTCCAATCCGGTGGA 59.331 61.111 12.91 12.91 45.72 4.02
3750 4197 2.690881 TCCAATCCGGTGGAGGGG 60.691 66.667 9.69 0.83 42.97 4.79
3751 4198 3.015145 CCAATCCGGTGGAGGGGT 61.015 66.667 5.11 0.00 41.65 4.95
3752 4199 2.272146 CAATCCGGTGGAGGGGTG 59.728 66.667 0.00 0.00 34.05 4.61
3753 4200 3.015145 AATCCGGTGGAGGGGTGG 61.015 66.667 0.00 0.00 34.05 4.61
3774 4221 4.659172 CGGAGGTGCAGGCCCAAA 62.659 66.667 0.00 0.00 0.00 3.28
3775 4222 2.203625 GGAGGTGCAGGCCCAAAA 60.204 61.111 0.00 0.00 0.00 2.44
3776 4223 2.574018 GGAGGTGCAGGCCCAAAAC 61.574 63.158 0.00 0.00 0.00 2.43
3777 4224 1.832167 GAGGTGCAGGCCCAAAACA 60.832 57.895 0.00 0.00 0.00 2.83
3778 4225 2.087462 GAGGTGCAGGCCCAAAACAC 62.087 60.000 0.00 0.31 0.00 3.32
3779 4226 2.133641 GGTGCAGGCCCAAAACACT 61.134 57.895 0.00 0.00 0.00 3.55
3780 4227 0.825840 GGTGCAGGCCCAAAACACTA 60.826 55.000 0.00 0.00 0.00 2.74
3781 4228 0.313987 GTGCAGGCCCAAAACACTAC 59.686 55.000 0.00 0.00 0.00 2.73
3782 4229 0.825840 TGCAGGCCCAAAACACTACC 60.826 55.000 0.00 0.00 0.00 3.18
3783 4230 1.532604 GCAGGCCCAAAACACTACCC 61.533 60.000 0.00 0.00 0.00 3.69
3784 4231 0.178975 CAGGCCCAAAACACTACCCA 60.179 55.000 0.00 0.00 0.00 4.51
3785 4232 0.112412 AGGCCCAAAACACTACCCAG 59.888 55.000 0.00 0.00 0.00 4.45
3786 4233 0.111639 GGCCCAAAACACTACCCAGA 59.888 55.000 0.00 0.00 0.00 3.86
3787 4234 1.479757 GGCCCAAAACACTACCCAGAA 60.480 52.381 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.205515 AGATTCTTGAGACCCAAATATGAGT 57.794 36.000 0.00 0.00 33.76 3.41
1 2 8.517062 AAAGATTCTTGAGACCCAAATATGAG 57.483 34.615 0.00 0.00 33.76 2.90
2 3 7.557719 GGAAAGATTCTTGAGACCCAAATATGA 59.442 37.037 0.00 0.00 33.76 2.15
3 4 7.201857 GGGAAAGATTCTTGAGACCCAAATATG 60.202 40.741 18.16 0.00 36.47 1.78
4 5 6.836007 GGGAAAGATTCTTGAGACCCAAATAT 59.164 38.462 18.16 0.00 36.47 1.28
5 6 6.187682 GGGAAAGATTCTTGAGACCCAAATA 58.812 40.000 18.16 0.00 36.47 1.40
6 7 5.019470 GGGAAAGATTCTTGAGACCCAAAT 58.981 41.667 18.16 0.00 36.47 2.32
7 8 4.407365 GGGAAAGATTCTTGAGACCCAAA 58.593 43.478 18.16 0.00 36.47 3.28
8 9 3.559171 CGGGAAAGATTCTTGAGACCCAA 60.559 47.826 20.65 0.00 36.26 4.12
9 10 2.027192 CGGGAAAGATTCTTGAGACCCA 60.027 50.000 20.65 0.00 36.26 4.51
10 11 2.027100 ACGGGAAAGATTCTTGAGACCC 60.027 50.000 15.32 15.32 0.00 4.46
11 12 3.336138 ACGGGAAAGATTCTTGAGACC 57.664 47.619 0.00 2.35 0.00 3.85
12 13 4.817517 TGTACGGGAAAGATTCTTGAGAC 58.182 43.478 0.00 0.00 0.00 3.36
13 14 5.677319 ATGTACGGGAAAGATTCTTGAGA 57.323 39.130 0.00 0.00 0.00 3.27
14 15 6.743575 AAATGTACGGGAAAGATTCTTGAG 57.256 37.500 0.00 0.00 0.00 3.02
15 16 6.488683 ACAAAATGTACGGGAAAGATTCTTGA 59.511 34.615 0.00 0.00 0.00 3.02
16 17 6.677913 ACAAAATGTACGGGAAAGATTCTTG 58.322 36.000 0.00 0.00 0.00 3.02
17 18 6.894339 ACAAAATGTACGGGAAAGATTCTT 57.106 33.333 0.00 0.00 0.00 2.52
18 19 6.894339 AACAAAATGTACGGGAAAGATTCT 57.106 33.333 0.00 0.00 0.00 2.40
19 20 7.142680 TGAAACAAAATGTACGGGAAAGATTC 58.857 34.615 0.00 0.00 0.00 2.52
20 21 7.045126 TGAAACAAAATGTACGGGAAAGATT 57.955 32.000 0.00 0.00 0.00 2.40
21 22 6.642707 TGAAACAAAATGTACGGGAAAGAT 57.357 33.333 0.00 0.00 0.00 2.40
22 23 6.642707 ATGAAACAAAATGTACGGGAAAGA 57.357 33.333 0.00 0.00 0.00 2.52
23 24 6.699642 ACAATGAAACAAAATGTACGGGAAAG 59.300 34.615 0.00 0.00 0.00 2.62
24 25 6.574350 ACAATGAAACAAAATGTACGGGAAA 58.426 32.000 0.00 0.00 0.00 3.13
25 26 6.150396 ACAATGAAACAAAATGTACGGGAA 57.850 33.333 0.00 0.00 0.00 3.97
26 27 5.776173 ACAATGAAACAAAATGTACGGGA 57.224 34.783 0.00 0.00 0.00 5.14
27 28 6.477033 TCAAACAATGAAACAAAATGTACGGG 59.523 34.615 0.00 0.00 34.30 5.28
28 29 7.456684 TCAAACAATGAAACAAAATGTACGG 57.543 32.000 0.00 0.00 34.30 4.02
29 30 8.003224 CCATCAAACAATGAAACAAAATGTACG 58.997 33.333 0.00 0.00 42.54 3.67
30 31 8.825745 ACCATCAAACAATGAAACAAAATGTAC 58.174 29.630 0.00 0.00 42.54 2.90
31 32 8.954950 ACCATCAAACAATGAAACAAAATGTA 57.045 26.923 0.00 0.00 42.54 2.29
32 33 7.862512 ACCATCAAACAATGAAACAAAATGT 57.137 28.000 0.00 0.00 42.54 2.71
37 38 9.482627 GGTTTATACCATCAAACAATGAAACAA 57.517 29.630 0.00 0.00 44.36 2.83
58 59 1.202830 ACGTGCAGGAACCATGGTTTA 60.203 47.619 30.33 12.44 38.60 2.01
61 62 0.467290 AAACGTGCAGGAACCATGGT 60.467 50.000 13.00 13.00 0.00 3.55
63 64 0.667993 ACAAACGTGCAGGAACCATG 59.332 50.000 14.38 6.74 0.00 3.66
104 105 8.671028 TGCTGCATCATATGTCACATATTTATC 58.329 33.333 7.64 0.00 0.00 1.75
115 116 4.566987 TCTCATCTGCTGCATCATATGTC 58.433 43.478 13.56 0.00 0.00 3.06
125 132 5.930569 TGATATGTGTAATCTCATCTGCTGC 59.069 40.000 0.00 0.00 0.00 5.25
140 147 9.125026 GTTAGATGGATTTTTCCTGATATGTGT 57.875 33.333 0.00 0.00 0.00 3.72
141 148 8.571336 GGTTAGATGGATTTTTCCTGATATGTG 58.429 37.037 0.00 0.00 0.00 3.21
168 175 5.582665 GGGATCTATTATTCGATGCACTTCC 59.417 44.000 0.00 0.00 30.62 3.46
169 176 5.582665 GGGGATCTATTATTCGATGCACTTC 59.417 44.000 0.00 0.00 29.90 3.01
220 227 5.104527 AGCCTGTTGTTACTTATGGCTCATA 60.105 40.000 0.00 0.00 44.99 2.15
259 266 7.234988 AGTTTGGAGGACTAGTGTTACTAATGT 59.765 37.037 0.00 0.00 29.00 2.71
280 287 9.482627 AGAGATAGAGTGTGTTTTTCTAGTTTG 57.517 33.333 0.00 0.00 0.00 2.93
295 302 8.817100 CGCTCTAATACAGATAGAGATAGAGTG 58.183 40.741 13.30 0.00 46.07 3.51
305 312 5.394663 CCCCAATCCGCTCTAATACAGATAG 60.395 48.000 0.00 0.00 31.13 2.08
308 315 2.632996 CCCCAATCCGCTCTAATACAGA 59.367 50.000 0.00 0.00 0.00 3.41
309 316 2.632996 TCCCCAATCCGCTCTAATACAG 59.367 50.000 0.00 0.00 0.00 2.74
310 317 2.632996 CTCCCCAATCCGCTCTAATACA 59.367 50.000 0.00 0.00 0.00 2.29
311 318 2.028020 CCTCCCCAATCCGCTCTAATAC 60.028 54.545 0.00 0.00 0.00 1.89
312 319 2.257207 CCTCCCCAATCCGCTCTAATA 58.743 52.381 0.00 0.00 0.00 0.98
313 320 1.059913 CCTCCCCAATCCGCTCTAAT 58.940 55.000 0.00 0.00 0.00 1.73
314 321 1.696097 GCCTCCCCAATCCGCTCTAA 61.696 60.000 0.00 0.00 0.00 2.10
352 359 2.185350 CTCTGCTCCGTCGCCAAT 59.815 61.111 0.00 0.00 0.00 3.16
409 416 2.772691 CCCTCTGTCCGCCTCGTAC 61.773 68.421 0.00 0.00 0.00 3.67
414 421 3.710722 CTTGCCCTCTGTCCGCCT 61.711 66.667 0.00 0.00 0.00 5.52
415 422 4.785453 CCTTGCCCTCTGTCCGCC 62.785 72.222 0.00 0.00 0.00 6.13
416 423 4.785453 CCCTTGCCCTCTGTCCGC 62.785 72.222 0.00 0.00 0.00 5.54
417 424 4.785453 GCCCTTGCCCTCTGTCCG 62.785 72.222 0.00 0.00 0.00 4.79
418 425 4.785453 CGCCCTTGCCCTCTGTCC 62.785 72.222 0.00 0.00 0.00 4.02
458 465 2.203351 GCCGGATGTGAATCCCCC 60.203 66.667 5.05 0.00 37.43 5.40
459 466 2.591715 CGCCGGATGTGAATCCCC 60.592 66.667 5.05 0.00 37.43 4.81
460 467 1.153249 TTCGCCGGATGTGAATCCC 60.153 57.895 5.05 0.00 38.52 3.85
461 468 0.462047 ACTTCGCCGGATGTGAATCC 60.462 55.000 5.05 0.00 42.33 3.01
462 469 0.931005 GACTTCGCCGGATGTGAATC 59.069 55.000 5.05 0.12 42.33 2.52
463 470 0.249120 TGACTTCGCCGGATGTGAAT 59.751 50.000 5.05 0.00 42.33 2.57
464 471 0.669318 GTGACTTCGCCGGATGTGAA 60.669 55.000 5.05 1.78 41.07 3.18
512 820 1.971357 TCCAGTTTCTCTTTCCTCGCT 59.029 47.619 0.00 0.00 0.00 4.93
531 839 3.061139 CGACAAGTTCTTCAACGACAGTC 60.061 47.826 0.00 0.00 37.61 3.51
532 840 2.858344 CGACAAGTTCTTCAACGACAGT 59.142 45.455 0.00 0.00 37.61 3.55
533 841 2.858344 ACGACAAGTTCTTCAACGACAG 59.142 45.455 0.00 0.00 37.61 3.51
534 842 2.883574 ACGACAAGTTCTTCAACGACA 58.116 42.857 0.00 0.00 37.61 4.35
535 843 3.920112 AACGACAAGTTCTTCAACGAC 57.080 42.857 0.00 0.00 39.16 4.34
562 870 4.708386 TGTAAAGGTGGCCCGGCG 62.708 66.667 0.00 0.00 35.12 6.46
566 874 0.970427 CCCATGTGTAAAGGTGGCCC 60.970 60.000 0.00 0.00 0.00 5.80
571 879 1.072266 TGAGGCCCATGTGTAAAGGT 58.928 50.000 0.00 0.00 0.00 3.50
597 905 2.527547 GAAATGTCGGTTGGGCTGCG 62.528 60.000 0.00 0.00 0.00 5.18
641 949 2.264005 TGCTTCGAAAAAGGGCTACA 57.736 45.000 0.00 0.00 0.00 2.74
644 952 1.609072 GACTTGCTTCGAAAAAGGGCT 59.391 47.619 19.14 4.23 0.00 5.19
668 976 3.165071 TGAGCAGTATGGAGTGAAGTCA 58.835 45.455 0.00 0.00 35.86 3.41
744 1052 4.435425 TGAATTTGAGGCATGCTAAATGC 58.565 39.130 18.92 18.67 43.85 3.56
799 1110 0.666374 AAAAGTTCCCCGTGCGAAAG 59.334 50.000 0.00 0.00 0.00 2.62
843 1154 5.371115 TTTGAACCAAGATTGATCCGAAC 57.629 39.130 0.00 0.00 0.00 3.95
927 1289 6.260663 AGGATATACCCAAAAAGAAAAGGCA 58.739 36.000 0.00 0.00 40.05 4.75
965 1327 4.541973 ATTGGGCTTCCATTTCTCAAAC 57.458 40.909 0.00 0.00 40.80 2.93
966 1328 5.336372 CGTAATTGGGCTTCCATTTCTCAAA 60.336 40.000 0.00 0.00 40.80 2.69
967 1329 4.157656 CGTAATTGGGCTTCCATTTCTCAA 59.842 41.667 0.00 0.00 40.80 3.02
971 1411 4.450082 AACGTAATTGGGCTTCCATTTC 57.550 40.909 0.00 0.00 40.80 2.17
1017 1457 0.522915 CGAGACTACGAAAGCCCGTC 60.523 60.000 0.00 0.00 43.20 4.79
1059 1506 2.203788 TGGAGGCGTGGAGACCTT 60.204 61.111 0.00 0.00 36.05 3.50
1173 1620 3.161450 TATGGGTGCGAGGAGGCC 61.161 66.667 0.00 0.00 0.00 5.19
1182 1629 1.532238 GAGGGAAGGGTATGGGTGC 59.468 63.158 0.00 0.00 0.00 5.01
1512 1959 2.202878 CAGTACCCGGCGACCATG 60.203 66.667 9.30 0.00 0.00 3.66
1689 2136 2.677524 TAGGTGACCACGTCGGGG 60.678 66.667 13.28 13.28 40.22 5.73
1848 2295 1.592669 CTCCATGGCGTCATCGACC 60.593 63.158 6.96 0.00 45.66 4.79
1857 2304 2.005451 CTCTTCAAGAACTCCATGGCG 58.995 52.381 6.96 2.63 0.00 5.69
2061 2508 0.105593 GAATCTCCATCGCAGGCTCA 59.894 55.000 0.00 0.00 0.00 4.26
2124 2571 2.190981 GCGTGAAGTATCGGGTTGTAG 58.809 52.381 0.00 0.00 0.00 2.74
2169 2616 0.676466 CCACAAACGCCATGGCTCTA 60.676 55.000 33.07 0.00 39.32 2.43
2287 2734 3.819368 TGTCCTTGAGTTGATGAAGCAA 58.181 40.909 0.00 0.00 0.00 3.91
2403 2850 1.431243 TGGAGCCCTTTGGTTACCATT 59.569 47.619 4.38 0.00 31.53 3.16
2589 3036 6.769341 TGTAGGTAAACAGATCGATAGCACTA 59.231 38.462 0.00 0.00 0.00 2.74
2610 3057 3.884693 TGCAGCCATTTGATACCATGTAG 59.115 43.478 0.00 0.00 0.00 2.74
2640 3087 9.394477 TCAATCAATATAGTGTAAGTCGATTCG 57.606 33.333 0.00 0.00 0.00 3.34
2649 3096 7.013274 GCCAAGCCTTCAATCAATATAGTGTAA 59.987 37.037 0.00 0.00 0.00 2.41
2679 3126 1.492133 CCTCCTTGACCAGGCCTTCA 61.492 60.000 0.00 1.63 43.55 3.02
2686 3133 2.046892 CCGTGCCTCCTTGACCAG 60.047 66.667 0.00 0.00 0.00 4.00
2846 3293 3.485877 GCCGAAGATGCACAAGAACATAC 60.486 47.826 0.00 0.00 0.00 2.39
2925 3372 4.384056 AGAAAGGACACTCACATGTTCAG 58.616 43.478 0.00 0.00 29.50 3.02
2987 3434 2.038557 TGGAGGAGGCTGTACAAGTTTC 59.961 50.000 0.00 0.00 0.00 2.78
3000 3447 1.072965 AGCAAGTTGAACTGGAGGAGG 59.927 52.381 7.16 0.00 0.00 4.30
3001 3448 2.557920 AGCAAGTTGAACTGGAGGAG 57.442 50.000 7.16 0.00 0.00 3.69
3002 3449 3.239449 TCTAGCAAGTTGAACTGGAGGA 58.761 45.455 7.16 0.00 0.00 3.71
3003 3450 3.685139 TCTAGCAAGTTGAACTGGAGG 57.315 47.619 7.16 0.00 0.00 4.30
3004 3451 5.059833 AGTTTCTAGCAAGTTGAACTGGAG 58.940 41.667 7.16 0.00 0.00 3.86
3005 3452 5.036117 AGTTTCTAGCAAGTTGAACTGGA 57.964 39.130 7.16 0.00 0.00 3.86
3006 3453 5.559035 CGAAGTTTCTAGCAAGTTGAACTGG 60.559 44.000 7.16 0.00 0.00 4.00
3007 3454 5.006746 ACGAAGTTTCTAGCAAGTTGAACTG 59.993 40.000 7.16 0.00 37.78 3.16
3008 3455 5.116882 ACGAAGTTTCTAGCAAGTTGAACT 58.883 37.500 7.16 4.07 37.78 3.01
3009 3456 5.405331 ACGAAGTTTCTAGCAAGTTGAAC 57.595 39.130 7.16 1.58 37.78 3.18
3342 3789 2.406002 TTTTGAGGGTGAGGCGTCCC 62.406 60.000 3.56 4.77 43.71 4.46
3343 3790 0.536460 TTTTTGAGGGTGAGGCGTCC 60.536 55.000 3.56 0.00 0.00 4.79
3344 3791 3.015516 TTTTTGAGGGTGAGGCGTC 57.984 52.632 0.00 0.00 0.00 5.19
3362 3809 4.161565 AGGCGTCCCTTTTCTTTTCTTTTT 59.838 37.500 0.00 0.00 38.74 1.94
3363 3810 3.704566 AGGCGTCCCTTTTCTTTTCTTTT 59.295 39.130 0.00 0.00 38.74 2.27
3364 3811 3.296854 AGGCGTCCCTTTTCTTTTCTTT 58.703 40.909 0.00 0.00 38.74 2.52
3365 3812 2.885266 GAGGCGTCCCTTTTCTTTTCTT 59.115 45.455 0.00 0.00 43.12 2.52
3366 3813 2.505405 GAGGCGTCCCTTTTCTTTTCT 58.495 47.619 0.00 0.00 43.12 2.52
3367 3814 1.540267 GGAGGCGTCCCTTTTCTTTTC 59.460 52.381 14.75 0.00 43.12 2.29
3368 3815 1.145119 AGGAGGCGTCCCTTTTCTTTT 59.855 47.619 21.60 0.00 45.26 2.27
3369 3816 0.771755 AGGAGGCGTCCCTTTTCTTT 59.228 50.000 21.60 0.00 45.26 2.52
3370 3817 0.325272 GAGGAGGCGTCCCTTTTCTT 59.675 55.000 21.60 1.00 45.26 2.52
3371 3818 0.836400 TGAGGAGGCGTCCCTTTTCT 60.836 55.000 21.60 1.79 45.26 2.52
3372 3819 0.036306 TTGAGGAGGCGTCCCTTTTC 59.964 55.000 21.60 12.93 45.26 2.29
3373 3820 0.036875 CTTGAGGAGGCGTCCCTTTT 59.963 55.000 21.60 3.00 45.26 2.27
3374 3821 1.679898 CTTGAGGAGGCGTCCCTTT 59.320 57.895 21.60 3.40 45.26 3.11
3375 3822 2.960688 GCTTGAGGAGGCGTCCCTT 61.961 63.158 21.60 4.20 45.26 3.95
3376 3823 3.394836 GCTTGAGGAGGCGTCCCT 61.395 66.667 21.60 9.29 45.26 4.20
3377 3824 4.821589 CGCTTGAGGAGGCGTCCC 62.822 72.222 21.60 13.44 45.26 4.46
3382 3829 4.475135 GGGGTCGCTTGAGGAGGC 62.475 72.222 0.00 0.00 0.00 4.70
3383 3830 3.003173 TGGGGTCGCTTGAGGAGG 61.003 66.667 0.00 0.00 0.00 4.30
3384 3831 2.266055 GTGGGGTCGCTTGAGGAG 59.734 66.667 0.00 0.00 0.00 3.69
3385 3832 3.319198 GGTGGGGTCGCTTGAGGA 61.319 66.667 0.00 0.00 0.00 3.71
3386 3833 3.316573 GAGGTGGGGTCGCTTGAGG 62.317 68.421 0.00 0.00 0.00 3.86
3387 3834 2.266055 GAGGTGGGGTCGCTTGAG 59.734 66.667 0.00 0.00 0.00 3.02
3388 3835 3.691342 CGAGGTGGGGTCGCTTGA 61.691 66.667 0.00 0.00 0.00 3.02
3417 3864 2.125753 GAGGAGGTGTCAGCGCAG 60.126 66.667 11.47 0.00 0.00 5.18
3418 3865 3.695606 GGAGGAGGTGTCAGCGCA 61.696 66.667 11.47 0.00 0.00 6.09
3419 3866 4.459089 GGGAGGAGGTGTCAGCGC 62.459 72.222 0.00 0.00 0.00 5.92
3420 3867 3.775654 GGGGAGGAGGTGTCAGCG 61.776 72.222 0.00 0.00 0.00 5.18
3421 3868 1.904990 GAAGGGGAGGAGGTGTCAGC 61.905 65.000 0.00 0.00 0.00 4.26
3422 3869 0.252467 AGAAGGGGAGGAGGTGTCAG 60.252 60.000 0.00 0.00 0.00 3.51
3423 3870 0.252284 GAGAAGGGGAGGAGGTGTCA 60.252 60.000 0.00 0.00 0.00 3.58
3424 3871 0.041982 AGAGAAGGGGAGGAGGTGTC 59.958 60.000 0.00 0.00 0.00 3.67
3425 3872 0.041982 GAGAGAAGGGGAGGAGGTGT 59.958 60.000 0.00 0.00 0.00 4.16
3426 3873 0.041833 TGAGAGAAGGGGAGGAGGTG 59.958 60.000 0.00 0.00 0.00 4.00
3427 3874 0.041982 GTGAGAGAAGGGGAGGAGGT 59.958 60.000 0.00 0.00 0.00 3.85
3428 3875 1.040339 CGTGAGAGAAGGGGAGGAGG 61.040 65.000 0.00 0.00 0.00 4.30
3429 3876 1.040339 CCGTGAGAGAAGGGGAGGAG 61.040 65.000 0.00 0.00 0.00 3.69
3430 3877 1.000486 CCGTGAGAGAAGGGGAGGA 60.000 63.158 0.00 0.00 0.00 3.71
3431 3878 2.726351 GCCGTGAGAGAAGGGGAGG 61.726 68.421 0.00 0.00 0.00 4.30
3432 3879 2.726351 GGCCGTGAGAGAAGGGGAG 61.726 68.421 0.00 0.00 0.00 4.30
3433 3880 2.683933 GGCCGTGAGAGAAGGGGA 60.684 66.667 0.00 0.00 0.00 4.81
3434 3881 2.685380 AGGCCGTGAGAGAAGGGG 60.685 66.667 0.00 0.00 0.00 4.79
3435 3882 0.395862 TAGAGGCCGTGAGAGAAGGG 60.396 60.000 0.00 0.00 0.00 3.95
3436 3883 0.741915 GTAGAGGCCGTGAGAGAAGG 59.258 60.000 0.00 0.00 0.00 3.46
3437 3884 1.464734 TGTAGAGGCCGTGAGAGAAG 58.535 55.000 0.00 0.00 0.00 2.85
3438 3885 1.819288 CTTGTAGAGGCCGTGAGAGAA 59.181 52.381 0.00 0.00 0.00 2.87
3439 3886 1.464734 CTTGTAGAGGCCGTGAGAGA 58.535 55.000 0.00 0.00 0.00 3.10
3440 3887 0.179124 GCTTGTAGAGGCCGTGAGAG 60.179 60.000 0.00 0.00 0.00 3.20
3441 3888 0.898326 TGCTTGTAGAGGCCGTGAGA 60.898 55.000 0.00 0.00 0.00 3.27
3442 3889 0.176680 ATGCTTGTAGAGGCCGTGAG 59.823 55.000 0.00 0.00 0.00 3.51
3443 3890 0.175760 GATGCTTGTAGAGGCCGTGA 59.824 55.000 0.00 0.00 0.00 4.35
3444 3891 0.811616 GGATGCTTGTAGAGGCCGTG 60.812 60.000 0.00 0.00 0.00 4.94
3445 3892 1.522569 GGATGCTTGTAGAGGCCGT 59.477 57.895 0.00 0.00 0.00 5.68
3446 3893 1.592669 CGGATGCTTGTAGAGGCCG 60.593 63.158 0.00 0.00 0.00 6.13
3447 3894 1.889573 GCGGATGCTTGTAGAGGCC 60.890 63.158 0.00 0.00 38.39 5.19
3448 3895 0.744414 TTGCGGATGCTTGTAGAGGC 60.744 55.000 0.00 0.00 43.34 4.70
3449 3896 1.737838 TTTGCGGATGCTTGTAGAGG 58.262 50.000 0.00 0.00 43.34 3.69
3450 3897 3.201290 AGATTTGCGGATGCTTGTAGAG 58.799 45.455 0.00 0.00 43.34 2.43
3451 3898 3.266510 AGATTTGCGGATGCTTGTAGA 57.733 42.857 0.00 0.00 43.34 2.59
3452 3899 3.242870 GGAAGATTTGCGGATGCTTGTAG 60.243 47.826 0.00 0.00 43.34 2.74
3453 3900 2.682856 GGAAGATTTGCGGATGCTTGTA 59.317 45.455 0.00 0.00 43.34 2.41
3454 3901 1.474077 GGAAGATTTGCGGATGCTTGT 59.526 47.619 0.00 0.00 43.34 3.16
3455 3902 1.202336 GGGAAGATTTGCGGATGCTTG 60.202 52.381 0.00 0.00 43.34 4.01
3456 3903 1.106285 GGGAAGATTTGCGGATGCTT 58.894 50.000 0.00 0.00 43.34 3.91
3457 3904 0.257039 AGGGAAGATTTGCGGATGCT 59.743 50.000 0.00 0.00 43.34 3.79
3458 3905 0.665298 GAGGGAAGATTTGCGGATGC 59.335 55.000 0.00 0.00 43.20 3.91
3459 3906 2.216898 GAGAGGGAAGATTTGCGGATG 58.783 52.381 0.00 0.00 0.00 3.51
3460 3907 1.141858 GGAGAGGGAAGATTTGCGGAT 59.858 52.381 0.00 0.00 0.00 4.18
3461 3908 0.541863 GGAGAGGGAAGATTTGCGGA 59.458 55.000 0.00 0.00 0.00 5.54
3462 3909 0.464554 GGGAGAGGGAAGATTTGCGG 60.465 60.000 0.00 0.00 0.00 5.69
3463 3910 0.253044 TGGGAGAGGGAAGATTTGCG 59.747 55.000 0.00 0.00 0.00 4.85
3464 3911 2.744352 ATGGGAGAGGGAAGATTTGC 57.256 50.000 0.00 0.00 0.00 3.68
3465 3912 6.198237 AGATTATGGGAGAGGGAAGATTTG 57.802 41.667 0.00 0.00 0.00 2.32
3466 3913 5.311913 GGAGATTATGGGAGAGGGAAGATTT 59.688 44.000 0.00 0.00 0.00 2.17
3467 3914 4.849235 GGAGATTATGGGAGAGGGAAGATT 59.151 45.833 0.00 0.00 0.00 2.40
3468 3915 4.111090 AGGAGATTATGGGAGAGGGAAGAT 59.889 45.833 0.00 0.00 0.00 2.40
3469 3916 3.472848 AGGAGATTATGGGAGAGGGAAGA 59.527 47.826 0.00 0.00 0.00 2.87
3470 3917 3.582208 CAGGAGATTATGGGAGAGGGAAG 59.418 52.174 0.00 0.00 0.00 3.46
3471 3918 3.051032 ACAGGAGATTATGGGAGAGGGAA 60.051 47.826 0.00 0.00 0.00 3.97
3472 3919 2.524440 ACAGGAGATTATGGGAGAGGGA 59.476 50.000 0.00 0.00 0.00 4.20
3473 3920 2.983296 ACAGGAGATTATGGGAGAGGG 58.017 52.381 0.00 0.00 0.00 4.30
3474 3921 5.128919 CAAAACAGGAGATTATGGGAGAGG 58.871 45.833 0.00 0.00 0.00 3.69
3475 3922 4.578105 GCAAAACAGGAGATTATGGGAGAG 59.422 45.833 0.00 0.00 0.00 3.20
3476 3923 4.526970 GCAAAACAGGAGATTATGGGAGA 58.473 43.478 0.00 0.00 0.00 3.71
3477 3924 3.633986 GGCAAAACAGGAGATTATGGGAG 59.366 47.826 0.00 0.00 0.00 4.30
3478 3925 3.269381 AGGCAAAACAGGAGATTATGGGA 59.731 43.478 0.00 0.00 0.00 4.37
3479 3926 3.633986 GAGGCAAAACAGGAGATTATGGG 59.366 47.826 0.00 0.00 0.00 4.00
3480 3927 4.530875 AGAGGCAAAACAGGAGATTATGG 58.469 43.478 0.00 0.00 0.00 2.74
3481 3928 5.188434 TGAGAGGCAAAACAGGAGATTATG 58.812 41.667 0.00 0.00 0.00 1.90
3482 3929 5.441718 TGAGAGGCAAAACAGGAGATTAT 57.558 39.130 0.00 0.00 0.00 1.28
3483 3930 4.908601 TGAGAGGCAAAACAGGAGATTA 57.091 40.909 0.00 0.00 0.00 1.75
3484 3931 3.795688 TGAGAGGCAAAACAGGAGATT 57.204 42.857 0.00 0.00 0.00 2.40
3485 3932 3.795688 TTGAGAGGCAAAACAGGAGAT 57.204 42.857 0.00 0.00 32.46 2.75
3486 3933 3.072915 TGATTGAGAGGCAAAACAGGAGA 59.927 43.478 0.00 0.00 40.48 3.71
3487 3934 3.190118 GTGATTGAGAGGCAAAACAGGAG 59.810 47.826 0.00 0.00 40.48 3.69
3488 3935 3.149196 GTGATTGAGAGGCAAAACAGGA 58.851 45.455 0.00 0.00 40.48 3.86
3489 3936 2.095567 CGTGATTGAGAGGCAAAACAGG 60.096 50.000 0.00 0.00 40.48 4.00
3490 3937 2.807967 TCGTGATTGAGAGGCAAAACAG 59.192 45.455 0.00 0.00 40.48 3.16
3491 3938 2.844946 TCGTGATTGAGAGGCAAAACA 58.155 42.857 0.00 0.00 40.48 2.83
3492 3939 3.896648 TTCGTGATTGAGAGGCAAAAC 57.103 42.857 0.00 0.00 40.48 2.43
3493 3940 4.071423 TGATTCGTGATTGAGAGGCAAAA 58.929 39.130 0.00 0.00 40.48 2.44
3494 3941 3.673902 TGATTCGTGATTGAGAGGCAAA 58.326 40.909 0.00 0.00 40.48 3.68
3495 3942 3.264947 CTGATTCGTGATTGAGAGGCAA 58.735 45.455 0.00 0.00 41.53 4.52
3496 3943 2.419159 CCTGATTCGTGATTGAGAGGCA 60.419 50.000 0.00 0.00 0.00 4.75
3497 3944 2.159043 TCCTGATTCGTGATTGAGAGGC 60.159 50.000 0.00 0.00 0.00 4.70
3498 3945 3.808466 TCCTGATTCGTGATTGAGAGG 57.192 47.619 0.00 0.00 0.00 3.69
3499 3946 4.202192 TGGATCCTGATTCGTGATTGAGAG 60.202 45.833 14.23 0.00 0.00 3.20
3500 3947 3.706086 TGGATCCTGATTCGTGATTGAGA 59.294 43.478 14.23 0.00 0.00 3.27
3501 3948 4.063998 TGGATCCTGATTCGTGATTGAG 57.936 45.455 14.23 0.00 0.00 3.02
3502 3949 4.383173 CATGGATCCTGATTCGTGATTGA 58.617 43.478 14.23 0.00 35.74 2.57
3503 3950 3.501062 CCATGGATCCTGATTCGTGATTG 59.499 47.826 14.23 0.00 35.74 2.67
3504 3951 3.392285 TCCATGGATCCTGATTCGTGATT 59.608 43.478 11.44 0.00 35.74 2.57
3505 3952 2.974794 TCCATGGATCCTGATTCGTGAT 59.025 45.455 11.44 0.00 35.74 3.06
3506 3953 2.366590 CTCCATGGATCCTGATTCGTGA 59.633 50.000 16.63 0.44 35.74 4.35
3507 3954 2.549563 CCTCCATGGATCCTGATTCGTG 60.550 54.545 16.63 0.00 38.35 4.35
3508 3955 1.696336 CCTCCATGGATCCTGATTCGT 59.304 52.381 16.63 0.00 38.35 3.85
3509 3956 1.696336 ACCTCCATGGATCCTGATTCG 59.304 52.381 16.63 0.00 39.71 3.34
3510 3957 3.872459 AACCTCCATGGATCCTGATTC 57.128 47.619 16.63 0.00 39.71 2.52
3511 3958 3.117360 GGAAACCTCCATGGATCCTGATT 60.117 47.826 20.61 9.50 41.96 2.57
3512 3959 2.444766 GGAAACCTCCATGGATCCTGAT 59.555 50.000 20.61 5.03 41.96 2.90
3513 3960 1.846439 GGAAACCTCCATGGATCCTGA 59.154 52.381 20.61 6.19 41.96 3.86
3514 3961 1.475751 CGGAAACCTCCATGGATCCTG 60.476 57.143 23.65 15.80 42.58 3.86
3515 3962 0.839946 CGGAAACCTCCATGGATCCT 59.160 55.000 23.65 7.77 42.58 3.24
3516 3963 0.837272 TCGGAAACCTCCATGGATCC 59.163 55.000 16.63 17.88 42.58 3.36
3517 3964 1.209504 TGTCGGAAACCTCCATGGATC 59.790 52.381 16.63 9.84 42.58 3.36
3518 3965 1.285280 TGTCGGAAACCTCCATGGAT 58.715 50.000 16.63 0.00 42.58 3.41
3519 3966 1.003118 CTTGTCGGAAACCTCCATGGA 59.997 52.381 15.27 15.27 42.58 3.41
3520 3967 1.271379 ACTTGTCGGAAACCTCCATGG 60.271 52.381 4.97 4.97 42.58 3.66
3521 3968 1.806542 CACTTGTCGGAAACCTCCATG 59.193 52.381 0.00 0.00 42.58 3.66
3522 3969 1.882352 GCACTTGTCGGAAACCTCCAT 60.882 52.381 0.00 0.00 42.58 3.41
3523 3970 0.534203 GCACTTGTCGGAAACCTCCA 60.534 55.000 0.00 0.00 42.58 3.86
3524 3971 0.250338 AGCACTTGTCGGAAACCTCC 60.250 55.000 0.00 0.00 38.52 4.30
3525 3972 2.067013 GTAGCACTTGTCGGAAACCTC 58.933 52.381 0.00 0.00 0.00 3.85
3526 3973 1.692519 AGTAGCACTTGTCGGAAACCT 59.307 47.619 0.00 0.00 0.00 3.50
3527 3974 2.067013 GAGTAGCACTTGTCGGAAACC 58.933 52.381 0.00 0.00 0.00 3.27
3528 3975 1.719780 CGAGTAGCACTTGTCGGAAAC 59.280 52.381 0.00 0.00 0.00 2.78
3529 3976 1.610038 TCGAGTAGCACTTGTCGGAAA 59.390 47.619 0.00 0.00 31.48 3.13
3530 3977 1.241165 TCGAGTAGCACTTGTCGGAA 58.759 50.000 0.00 0.00 31.48 4.30
3531 3978 1.400846 GATCGAGTAGCACTTGTCGGA 59.599 52.381 0.00 0.00 31.48 4.55
3532 3979 1.402259 AGATCGAGTAGCACTTGTCGG 59.598 52.381 0.00 0.00 31.48 4.79
3533 3980 2.445316 CAGATCGAGTAGCACTTGTCG 58.555 52.381 0.00 0.00 31.48 4.35
3534 3981 2.159310 AGCAGATCGAGTAGCACTTGTC 60.159 50.000 8.22 0.00 31.48 3.18
3535 3982 1.821753 AGCAGATCGAGTAGCACTTGT 59.178 47.619 8.22 0.00 31.48 3.16
3536 3983 2.575694 AGCAGATCGAGTAGCACTTG 57.424 50.000 8.22 0.00 0.00 3.16
3537 3984 4.083749 CGTATAGCAGATCGAGTAGCACTT 60.084 45.833 8.22 0.00 0.00 3.16
3538 3985 3.433957 CGTATAGCAGATCGAGTAGCACT 59.566 47.826 8.22 0.00 0.00 4.40
3539 3986 3.425094 CCGTATAGCAGATCGAGTAGCAC 60.425 52.174 8.22 0.00 0.00 4.40
3540 3987 2.742589 CCGTATAGCAGATCGAGTAGCA 59.257 50.000 8.22 0.00 0.00 3.49
3541 3988 2.476519 GCCGTATAGCAGATCGAGTAGC 60.477 54.545 0.00 0.00 0.00 3.58
3542 3989 2.742589 TGCCGTATAGCAGATCGAGTAG 59.257 50.000 0.00 0.00 38.00 2.57
3543 3990 2.774687 TGCCGTATAGCAGATCGAGTA 58.225 47.619 0.00 0.00 38.00 2.59
3544 3991 1.605753 TGCCGTATAGCAGATCGAGT 58.394 50.000 0.00 0.00 38.00 4.18
3581 4028 4.778415 CGAGACGCAGACCCACGG 62.778 72.222 0.00 0.00 0.00 4.94
3592 4039 1.299014 GAGGATGAGCAGCGAGACG 60.299 63.158 0.00 0.00 0.00 4.18
3593 4040 1.299014 CGAGGATGAGCAGCGAGAC 60.299 63.158 0.00 0.00 0.00 3.36
3594 4041 2.484928 CCGAGGATGAGCAGCGAGA 61.485 63.158 0.00 0.00 0.00 4.04
3595 4042 2.027314 CCGAGGATGAGCAGCGAG 59.973 66.667 0.00 0.00 0.00 5.03
3596 4043 3.531207 CCCGAGGATGAGCAGCGA 61.531 66.667 0.00 0.00 0.00 4.93
3597 4044 3.496875 CTCCCGAGGATGAGCAGCG 62.497 68.421 0.00 0.00 0.00 5.18
3598 4045 2.420890 CTCCCGAGGATGAGCAGC 59.579 66.667 0.00 0.00 0.00 5.25
3608 4055 2.362632 ACCGAGTTCCCTCCCGAG 60.363 66.667 0.00 0.00 33.93 4.63
3609 4056 2.678934 CACCGAGTTCCCTCCCGA 60.679 66.667 0.00 0.00 33.93 5.14
3610 4057 2.580601 AACACCGAGTTCCCTCCCG 61.581 63.158 0.00 0.00 34.74 5.14
3611 4058 1.003718 CAACACCGAGTTCCCTCCC 60.004 63.158 0.00 0.00 38.74 4.30
3612 4059 1.003718 CCAACACCGAGTTCCCTCC 60.004 63.158 0.00 0.00 38.74 4.30
3613 4060 1.671379 GCCAACACCGAGTTCCCTC 60.671 63.158 0.00 0.00 38.74 4.30
3614 4061 2.430367 GCCAACACCGAGTTCCCT 59.570 61.111 0.00 0.00 38.74 4.20
3615 4062 3.047877 CGCCAACACCGAGTTCCC 61.048 66.667 0.00 0.00 38.74 3.97
3616 4063 2.027625 CTCGCCAACACCGAGTTCC 61.028 63.158 2.90 0.00 45.17 3.62
3617 4064 3.550656 CTCGCCAACACCGAGTTC 58.449 61.111 2.90 0.00 45.17 3.01
3621 4068 2.029964 GAACCTCGCCAACACCGA 59.970 61.111 0.00 0.00 0.00 4.69
3622 4069 3.047877 GGAACCTCGCCAACACCG 61.048 66.667 0.00 0.00 0.00 4.94
3623 4070 1.303317 ATGGAACCTCGCCAACACC 60.303 57.895 0.00 0.00 39.21 4.16
3624 4071 1.586154 CCATGGAACCTCGCCAACAC 61.586 60.000 5.56 0.00 39.21 3.32
3625 4072 1.303236 CCATGGAACCTCGCCAACA 60.303 57.895 5.56 0.00 39.21 3.33
3626 4073 1.002624 TCCATGGAACCTCGCCAAC 60.003 57.895 13.46 0.00 39.21 3.77
3627 4074 1.299648 CTCCATGGAACCTCGCCAA 59.700 57.895 17.00 0.00 39.21 4.52
3628 4075 1.918293 ACTCCATGGAACCTCGCCA 60.918 57.895 17.00 0.00 40.24 5.69
3629 4076 1.450312 CACTCCATGGAACCTCGCC 60.450 63.158 17.00 0.00 0.00 5.54
3630 4077 2.109126 GCACTCCATGGAACCTCGC 61.109 63.158 17.00 10.02 0.00 5.03
3631 4078 1.450312 GGCACTCCATGGAACCTCG 60.450 63.158 17.00 6.12 0.00 4.63
3632 4079 0.038166 TTGGCACTCCATGGAACCTC 59.962 55.000 17.00 6.87 43.05 3.85
3633 4080 0.038744 CTTGGCACTCCATGGAACCT 59.961 55.000 17.00 0.00 43.05 3.50
3634 4081 1.598701 GCTTGGCACTCCATGGAACC 61.599 60.000 17.00 17.30 43.05 3.62
3635 4082 1.885871 GCTTGGCACTCCATGGAAC 59.114 57.895 17.00 8.19 43.05 3.62
3636 4083 1.675310 CGCTTGGCACTCCATGGAA 60.675 57.895 17.00 0.00 43.05 3.53
3637 4084 2.046023 CGCTTGGCACTCCATGGA 60.046 61.111 15.27 15.27 43.05 3.41
3638 4085 3.136123 CCGCTTGGCACTCCATGG 61.136 66.667 4.97 4.97 43.05 3.66
3639 4086 3.136123 CCCGCTTGGCACTCCATG 61.136 66.667 0.00 0.00 43.05 3.66
3640 4087 4.431131 CCCCGCTTGGCACTCCAT 62.431 66.667 0.00 0.00 43.05 3.41
3648 4095 4.473520 ATGCTCGTCCCCGCTTGG 62.474 66.667 0.00 0.00 0.00 3.61
3649 4096 3.197790 CATGCTCGTCCCCGCTTG 61.198 66.667 0.00 0.00 0.00 4.01
3650 4097 3.390521 TCATGCTCGTCCCCGCTT 61.391 61.111 0.00 0.00 0.00 4.68
3651 4098 4.148825 GTCATGCTCGTCCCCGCT 62.149 66.667 0.00 0.00 0.00 5.52
3653 4100 2.907897 GAAGGTCATGCTCGTCCCCG 62.908 65.000 0.00 0.00 0.00 5.73
3654 4101 1.153349 GAAGGTCATGCTCGTCCCC 60.153 63.158 0.00 0.00 0.00 4.81
3655 4102 1.112113 TAGAAGGTCATGCTCGTCCC 58.888 55.000 0.00 0.00 0.00 4.46
3656 4103 3.385577 GAATAGAAGGTCATGCTCGTCC 58.614 50.000 0.00 0.00 0.00 4.79
3657 4104 3.385577 GGAATAGAAGGTCATGCTCGTC 58.614 50.000 0.00 0.00 0.00 4.20
3658 4105 2.103263 GGGAATAGAAGGTCATGCTCGT 59.897 50.000 0.00 0.00 0.00 4.18
3659 4106 2.548920 GGGGAATAGAAGGTCATGCTCG 60.549 54.545 0.00 0.00 0.00 5.03
3660 4107 2.548920 CGGGGAATAGAAGGTCATGCTC 60.549 54.545 0.00 0.00 0.00 4.26
3661 4108 1.417890 CGGGGAATAGAAGGTCATGCT 59.582 52.381 0.00 0.00 0.00 3.79
3662 4109 1.543429 CCGGGGAATAGAAGGTCATGC 60.543 57.143 0.00 0.00 0.00 4.06
3663 4110 1.543429 GCCGGGGAATAGAAGGTCATG 60.543 57.143 2.18 0.00 0.00 3.07
3664 4111 0.765510 GCCGGGGAATAGAAGGTCAT 59.234 55.000 2.18 0.00 0.00 3.06
3665 4112 0.326238 AGCCGGGGAATAGAAGGTCA 60.326 55.000 2.18 0.00 0.00 4.02
3666 4113 0.393448 GAGCCGGGGAATAGAAGGTC 59.607 60.000 2.18 0.00 0.00 3.85
3667 4114 0.031010 AGAGCCGGGGAATAGAAGGT 60.031 55.000 2.18 0.00 0.00 3.50
3668 4115 1.070914 GAAGAGCCGGGGAATAGAAGG 59.929 57.143 2.18 0.00 0.00 3.46
3669 4116 1.762957 TGAAGAGCCGGGGAATAGAAG 59.237 52.381 2.18 0.00 0.00 2.85
3670 4117 1.485066 GTGAAGAGCCGGGGAATAGAA 59.515 52.381 2.18 0.00 0.00 2.10
3671 4118 1.120530 GTGAAGAGCCGGGGAATAGA 58.879 55.000 2.18 0.00 0.00 1.98
3672 4119 0.106894 GGTGAAGAGCCGGGGAATAG 59.893 60.000 2.18 0.00 0.00 1.73
3673 4120 1.682451 CGGTGAAGAGCCGGGGAATA 61.682 60.000 2.18 0.00 44.98 1.75
3674 4121 2.998949 GGTGAAGAGCCGGGGAAT 59.001 61.111 2.18 0.00 0.00 3.01
3675 4122 3.702048 CGGTGAAGAGCCGGGGAA 61.702 66.667 2.18 0.00 44.98 3.97
3679 4126 4.452733 GGGTCGGTGAAGAGCCGG 62.453 72.222 0.00 0.00 46.93 6.13
3682 4129 2.266055 CTGGGGTCGGTGAAGAGC 59.734 66.667 0.00 0.00 37.86 4.09
3683 4130 1.192146 TTCCTGGGGTCGGTGAAGAG 61.192 60.000 0.00 0.00 0.00 2.85
3684 4131 1.152204 TTCCTGGGGTCGGTGAAGA 60.152 57.895 0.00 0.00 0.00 2.87
3685 4132 1.192146 TCTTCCTGGGGTCGGTGAAG 61.192 60.000 0.00 0.00 35.01 3.02
3686 4133 0.546747 ATCTTCCTGGGGTCGGTGAA 60.547 55.000 0.00 0.00 0.00 3.18
3687 4134 0.976073 GATCTTCCTGGGGTCGGTGA 60.976 60.000 0.00 0.00 0.00 4.02
3688 4135 1.522569 GATCTTCCTGGGGTCGGTG 59.477 63.158 0.00 0.00 0.00 4.94
3689 4136 2.058595 CGATCTTCCTGGGGTCGGT 61.059 63.158 0.00 0.00 0.00 4.69
3690 4137 1.115930 ATCGATCTTCCTGGGGTCGG 61.116 60.000 5.90 0.00 33.46 4.79
3691 4138 0.032678 CATCGATCTTCCTGGGGTCG 59.967 60.000 0.00 0.00 0.00 4.79
3692 4139 1.414158 TCATCGATCTTCCTGGGGTC 58.586 55.000 0.00 0.00 0.00 4.46
3693 4140 1.696336 CATCATCGATCTTCCTGGGGT 59.304 52.381 0.00 0.00 0.00 4.95
3694 4141 1.002888 CCATCATCGATCTTCCTGGGG 59.997 57.143 0.00 0.00 0.00 4.96
3695 4142 1.002888 CCCATCATCGATCTTCCTGGG 59.997 57.143 10.98 10.98 36.21 4.45
3696 4143 1.002888 CCCCATCATCGATCTTCCTGG 59.997 57.143 0.00 0.00 0.00 4.45
3697 4144 1.973515 TCCCCATCATCGATCTTCCTG 59.026 52.381 0.00 0.00 0.00 3.86
3698 4145 2.405618 TCCCCATCATCGATCTTCCT 57.594 50.000 0.00 0.00 0.00 3.36
3699 4146 2.417924 CGATCCCCATCATCGATCTTCC 60.418 54.545 0.00 0.00 44.95 3.46
3700 4147 2.493675 TCGATCCCCATCATCGATCTTC 59.506 50.000 0.00 0.00 45.56 2.87
3701 4148 2.529632 TCGATCCCCATCATCGATCTT 58.470 47.619 0.00 0.00 45.56 2.40
3702 4149 2.222227 TCGATCCCCATCATCGATCT 57.778 50.000 0.00 0.00 45.56 2.75
3706 4153 1.010935 CGCTTCGATCCCCATCATCG 61.011 60.000 0.00 0.00 43.77 3.84
3707 4154 1.294659 GCGCTTCGATCCCCATCATC 61.295 60.000 0.00 0.00 0.00 2.92
3708 4155 1.302033 GCGCTTCGATCCCCATCAT 60.302 57.895 0.00 0.00 0.00 2.45
3709 4156 2.108976 GCGCTTCGATCCCCATCA 59.891 61.111 0.00 0.00 0.00 3.07
3710 4157 2.666526 GGCGCTTCGATCCCCATC 60.667 66.667 7.64 0.00 0.00 3.51
3711 4158 4.609018 CGGCGCTTCGATCCCCAT 62.609 66.667 7.64 0.00 0.00 4.00
3721 4168 4.722700 ATTGGAGCACCGGCGCTT 62.723 61.111 19.78 0.00 44.01 4.68
3727 4174 2.819595 CACCGGATTGGAGCACCG 60.820 66.667 9.46 0.00 45.24 4.94
3728 4175 2.438434 CCACCGGATTGGAGCACC 60.438 66.667 9.46 0.00 42.00 5.01
3729 4176 2.668632 TCCACCGGATTGGAGCAC 59.331 61.111 9.46 0.00 41.00 4.40
3733 4180 2.690881 CCCCTCCACCGGATTGGA 60.691 66.667 9.46 11.64 43.83 3.53
3734 4181 3.015145 ACCCCTCCACCGGATTGG 61.015 66.667 9.46 6.61 46.41 3.16
3735 4182 2.272146 CACCCCTCCACCGGATTG 59.728 66.667 9.46 0.00 0.00 2.67
3736 4183 3.015145 CCACCCCTCCACCGGATT 61.015 66.667 9.46 0.00 0.00 3.01
3757 4204 4.659172 TTTGGGCCTGCACCTCCG 62.659 66.667 4.53 0.00 0.00 4.63
3758 4205 2.203625 TTTTGGGCCTGCACCTCC 60.204 61.111 4.53 0.00 0.00 4.30
3759 4206 1.832167 TGTTTTGGGCCTGCACCTC 60.832 57.895 4.53 0.00 0.00 3.85
3760 4207 2.133641 GTGTTTTGGGCCTGCACCT 61.134 57.895 4.53 0.00 0.00 4.00
3761 4208 0.825840 TAGTGTTTTGGGCCTGCACC 60.826 55.000 4.53 0.00 0.00 5.01
3762 4209 0.313987 GTAGTGTTTTGGGCCTGCAC 59.686 55.000 4.53 8.55 0.00 4.57
3763 4210 0.825840 GGTAGTGTTTTGGGCCTGCA 60.826 55.000 4.53 0.00 0.00 4.41
3764 4211 1.532604 GGGTAGTGTTTTGGGCCTGC 61.533 60.000 4.53 0.00 0.00 4.85
3765 4212 0.178975 TGGGTAGTGTTTTGGGCCTG 60.179 55.000 4.53 0.00 0.00 4.85
3766 4213 0.112412 CTGGGTAGTGTTTTGGGCCT 59.888 55.000 4.53 0.00 0.00 5.19
3767 4214 0.111639 TCTGGGTAGTGTTTTGGGCC 59.888 55.000 0.00 0.00 0.00 5.80
3768 4215 1.989706 TTCTGGGTAGTGTTTTGGGC 58.010 50.000 0.00 0.00 0.00 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.