Multiple sequence alignment - TraesCS1A01G013600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G013600 chr1A 100.000 2334 0 0 1 2334 7641717 7644050 0.000000e+00 4311
1 TraesCS1A01G013600 chr1A 80.831 626 58 35 845 1422 7962303 7962914 3.560000e-118 435
2 TraesCS1A01G013600 chr1A 89.764 254 17 2 6 251 531286227 531285975 1.350000e-82 316
3 TraesCS1A01G013600 chr1A 86.667 195 17 7 1146 1333 32451564 32451756 8.450000e-50 207
4 TraesCS1A01G013600 chr1A 84.768 151 18 3 573 722 7962060 7962206 1.870000e-31 147
5 TraesCS1A01G013600 chr1A 77.551 245 20 14 573 783 7843487 7843730 5.270000e-22 115
6 TraesCS1A01G013600 chr1B 82.204 1461 162 52 929 2334 8658545 8659962 0.000000e+00 1168
7 TraesCS1A01G013600 chr1B 79.618 471 25 29 365 785 8657674 8658123 2.960000e-69 272
8 TraesCS1A01G013600 chr1B 86.500 200 17 7 1142 1333 51590260 51590457 6.530000e-51 211
9 TraesCS1A01G013600 chr7B 80.777 515 67 22 843 1336 452468006 452468509 7.880000e-100 374
10 TraesCS1A01G013600 chr6A 92.742 248 15 2 6 251 24514295 24514049 2.850000e-94 355
11 TraesCS1A01G013600 chr6A 87.500 248 17 3 6 251 24571268 24571033 8.220000e-70 274
12 TraesCS1A01G013600 chr2A 90.514 253 19 4 1 249 43220831 43221082 1.730000e-86 329
13 TraesCS1A01G013600 chr2A 89.960 249 21 2 7 252 43242111 43242358 3.740000e-83 318
14 TraesCS1A01G013600 chr2A 84.314 255 33 5 1 251 767630591 767630842 2.320000e-60 243
15 TraesCS1A01G013600 chr5A 89.919 248 21 3 8 252 697754093 697753847 1.350000e-82 316
16 TraesCS1A01G013600 chr5A 88.845 251 20 3 8 251 697759293 697759044 3.770000e-78 302
17 TraesCS1A01G013600 chr1D 82.051 390 39 23 966 1338 6548480 6548105 1.050000e-78 303
18 TraesCS1A01G013600 chr1D 81.047 401 47 18 960 1336 6399957 6399562 2.270000e-75 292
19 TraesCS1A01G013600 chr1D 87.692 195 15 6 1146 1333 33712464 33712656 3.900000e-53 219
20 TraesCS1A01G013600 chr1D 85.128 195 20 6 1146 1333 33663996 33664188 8.510000e-45 191
21 TraesCS1A01G013600 chr1D 81.048 248 23 11 573 800 6548823 6548580 2.380000e-40 176
22 TraesCS1A01G013600 chr4D 86.381 257 25 8 1 251 497361339 497361591 2.960000e-69 272


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G013600 chr1A 7641717 7644050 2333 False 4311.0 4311 100.0000 1 2334 1 chr1A.!!$F1 2333
1 TraesCS1A01G013600 chr1A 7962060 7962914 854 False 291.0 435 82.7995 573 1422 2 chr1A.!!$F4 849
2 TraesCS1A01G013600 chr1B 8657674 8659962 2288 False 720.0 1168 80.9110 365 2334 2 chr1B.!!$F2 1969
3 TraesCS1A01G013600 chr7B 452468006 452468509 503 False 374.0 374 80.7770 843 1336 1 chr7B.!!$F1 493
4 TraesCS1A01G013600 chr1D 6548105 6548823 718 True 239.5 303 81.5495 573 1338 2 chr1D.!!$R2 765

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
117 118 0.031721 CGATACCCTAACTCACGCCC 59.968 60.0 0.0 0.0 0.0 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1749 2204 0.036105 AGAGCCATTCATGCACGTCA 60.036 50.0 0.0 0.0 0.0 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.877097 TAGCCAGGTTGAATCAGCAA 57.123 45.000 0.00 0.00 0.00 3.91
20 21 1.542492 AGCCAGGTTGAATCAGCAAG 58.458 50.000 0.00 0.00 0.00 4.01
21 22 1.074405 AGCCAGGTTGAATCAGCAAGA 59.926 47.619 0.00 0.00 0.00 3.02
22 23 1.888512 GCCAGGTTGAATCAGCAAGAA 59.111 47.619 0.00 0.00 0.00 2.52
23 24 2.297033 GCCAGGTTGAATCAGCAAGAAA 59.703 45.455 0.00 0.00 0.00 2.52
24 25 3.613432 GCCAGGTTGAATCAGCAAGAAAG 60.613 47.826 0.00 0.00 0.00 2.62
25 26 3.057033 CCAGGTTGAATCAGCAAGAAAGG 60.057 47.826 0.00 0.00 0.00 3.11
26 27 3.057033 CAGGTTGAATCAGCAAGAAAGGG 60.057 47.826 0.00 0.00 0.00 3.95
27 28 2.232208 GGTTGAATCAGCAAGAAAGGGG 59.768 50.000 0.00 0.00 0.00 4.79
28 29 3.157087 GTTGAATCAGCAAGAAAGGGGA 58.843 45.455 0.00 0.00 0.00 4.81
29 30 3.744940 TGAATCAGCAAGAAAGGGGAT 57.255 42.857 0.00 0.00 0.00 3.85
30 31 3.624777 TGAATCAGCAAGAAAGGGGATC 58.375 45.455 0.00 0.00 0.00 3.36
31 32 2.338577 ATCAGCAAGAAAGGGGATCG 57.661 50.000 0.00 0.00 0.00 3.69
32 33 0.253044 TCAGCAAGAAAGGGGATCGG 59.747 55.000 0.00 0.00 0.00 4.18
33 34 0.749454 CAGCAAGAAAGGGGATCGGG 60.749 60.000 0.00 0.00 0.00 5.14
34 35 0.914417 AGCAAGAAAGGGGATCGGGA 60.914 55.000 0.00 0.00 0.00 5.14
35 36 0.183731 GCAAGAAAGGGGATCGGGAT 59.816 55.000 0.00 0.00 0.00 3.85
36 37 1.410224 GCAAGAAAGGGGATCGGGATT 60.410 52.381 0.00 0.00 0.00 3.01
37 38 2.950418 GCAAGAAAGGGGATCGGGATTT 60.950 50.000 0.00 0.00 0.00 2.17
38 39 3.687264 GCAAGAAAGGGGATCGGGATTTA 60.687 47.826 0.00 0.00 0.00 1.40
39 40 4.137543 CAAGAAAGGGGATCGGGATTTAG 58.862 47.826 0.00 0.00 0.00 1.85
40 41 3.665443 AGAAAGGGGATCGGGATTTAGA 58.335 45.455 0.00 0.00 0.00 2.10
41 42 3.648545 AGAAAGGGGATCGGGATTTAGAG 59.351 47.826 0.00 0.00 0.00 2.43
42 43 1.353091 AGGGGATCGGGATTTAGAGC 58.647 55.000 0.00 0.00 0.00 4.09
43 44 0.325272 GGGGATCGGGATTTAGAGCC 59.675 60.000 0.00 0.00 41.82 4.70
44 45 0.037232 GGGATCGGGATTTAGAGCCG 60.037 60.000 0.00 0.00 43.35 5.52
45 46 0.037232 GGATCGGGATTTAGAGCCGG 60.037 60.000 0.00 0.00 33.01 6.13
46 47 0.037232 GATCGGGATTTAGAGCCGGG 60.037 60.000 2.18 0.00 32.96 5.73
47 48 1.481056 ATCGGGATTTAGAGCCGGGG 61.481 60.000 2.18 0.00 32.96 5.73
48 49 2.836888 GGGATTTAGAGCCGGGGG 59.163 66.667 2.18 0.00 29.87 5.40
49 50 2.076803 GGGATTTAGAGCCGGGGGT 61.077 63.158 2.18 0.00 29.87 4.95
50 51 1.148498 GGATTTAGAGCCGGGGGTG 59.852 63.158 2.18 0.00 0.00 4.61
51 52 1.148498 GATTTAGAGCCGGGGGTGG 59.852 63.158 2.18 0.00 0.00 4.61
52 53 2.339275 GATTTAGAGCCGGGGGTGGG 62.339 65.000 2.18 0.00 0.00 4.61
53 54 2.850851 ATTTAGAGCCGGGGGTGGGA 62.851 60.000 2.18 0.00 0.00 4.37
54 55 3.995809 TTAGAGCCGGGGGTGGGAG 62.996 68.421 2.18 0.00 0.00 4.30
60 61 4.733725 CGGGGGTGGGAGGAAGGA 62.734 72.222 0.00 0.00 0.00 3.36
61 62 2.044620 GGGGGTGGGAGGAAGGAT 59.955 66.667 0.00 0.00 0.00 3.24
62 63 1.320512 GGGGGTGGGAGGAAGGATA 59.679 63.158 0.00 0.00 0.00 2.59
63 64 1.060743 GGGGGTGGGAGGAAGGATAC 61.061 65.000 0.00 0.00 0.00 2.24
64 65 0.327191 GGGGTGGGAGGAAGGATACA 60.327 60.000 0.00 0.00 41.41 2.29
65 66 1.699257 GGGGTGGGAGGAAGGATACAT 60.699 57.143 0.00 0.00 41.41 2.29
66 67 1.700186 GGGTGGGAGGAAGGATACATC 59.300 57.143 0.00 0.00 41.41 3.06
67 68 1.344763 GGTGGGAGGAAGGATACATCG 59.655 57.143 0.00 0.00 34.35 3.84
68 69 1.048601 TGGGAGGAAGGATACATCGC 58.951 55.000 0.00 0.00 34.35 4.58
69 70 0.321996 GGGAGGAAGGATACATCGCC 59.678 60.000 0.00 0.00 34.35 5.54
70 71 0.321996 GGAGGAAGGATACATCGCCC 59.678 60.000 0.00 0.00 34.35 6.13
71 72 1.048601 GAGGAAGGATACATCGCCCA 58.951 55.000 0.00 0.00 34.35 5.36
72 73 1.416401 GAGGAAGGATACATCGCCCAA 59.584 52.381 0.00 0.00 34.35 4.12
73 74 1.141053 AGGAAGGATACATCGCCCAAC 59.859 52.381 0.00 0.00 34.35 3.77
74 75 1.217882 GAAGGATACATCGCCCAACG 58.782 55.000 0.00 0.00 41.69 4.10
75 76 0.179056 AAGGATACATCGCCCAACGG 60.179 55.000 0.00 0.00 40.82 4.44
88 89 4.329545 AACGGCGCCACCAGTGAT 62.330 61.111 28.98 0.00 39.03 3.06
89 90 4.760047 ACGGCGCCACCAGTGATC 62.760 66.667 28.98 0.00 39.03 2.92
90 91 4.457496 CGGCGCCACCAGTGATCT 62.457 66.667 28.98 0.00 39.03 2.75
91 92 2.821366 GGCGCCACCAGTGATCTG 60.821 66.667 24.80 0.00 41.01 2.90
92 93 2.265739 GCGCCACCAGTGATCTGA 59.734 61.111 0.00 0.00 43.76 3.27
93 94 1.153289 GCGCCACCAGTGATCTGAT 60.153 57.895 0.00 0.00 43.76 2.90
94 95 1.156645 GCGCCACCAGTGATCTGATC 61.157 60.000 10.72 10.72 43.76 2.92
95 96 0.531532 CGCCACCAGTGATCTGATCC 60.532 60.000 14.71 6.61 43.76 3.36
96 97 0.543277 GCCACCAGTGATCTGATCCA 59.457 55.000 14.71 0.97 43.76 3.41
97 98 1.065199 GCCACCAGTGATCTGATCCAA 60.065 52.381 14.71 0.00 43.76 3.53
98 99 2.636830 CCACCAGTGATCTGATCCAAC 58.363 52.381 14.71 7.50 43.76 3.77
99 100 2.274437 CACCAGTGATCTGATCCAACG 58.726 52.381 14.71 3.32 43.76 4.10
100 101 2.094026 CACCAGTGATCTGATCCAACGA 60.094 50.000 14.71 0.00 43.76 3.85
101 102 2.768527 ACCAGTGATCTGATCCAACGAT 59.231 45.455 14.71 0.00 43.76 3.73
102 103 3.960755 ACCAGTGATCTGATCCAACGATA 59.039 43.478 14.71 0.00 43.76 2.92
103 104 4.202161 ACCAGTGATCTGATCCAACGATAC 60.202 45.833 14.71 4.80 43.76 2.24
104 105 4.302455 CAGTGATCTGATCCAACGATACC 58.698 47.826 14.71 0.00 43.76 2.73
105 106 3.322254 AGTGATCTGATCCAACGATACCC 59.678 47.826 14.71 0.00 0.00 3.69
106 107 3.322254 GTGATCTGATCCAACGATACCCT 59.678 47.826 14.71 0.00 0.00 4.34
107 108 4.523173 GTGATCTGATCCAACGATACCCTA 59.477 45.833 14.71 0.00 0.00 3.53
108 109 5.010719 GTGATCTGATCCAACGATACCCTAA 59.989 44.000 14.71 0.00 0.00 2.69
109 110 4.931661 TCTGATCCAACGATACCCTAAC 57.068 45.455 0.00 0.00 0.00 2.34
110 111 4.543689 TCTGATCCAACGATACCCTAACT 58.456 43.478 0.00 0.00 0.00 2.24
111 112 4.583489 TCTGATCCAACGATACCCTAACTC 59.417 45.833 0.00 0.00 0.00 3.01
112 113 4.283337 TGATCCAACGATACCCTAACTCA 58.717 43.478 0.00 0.00 0.00 3.41
113 114 4.098960 TGATCCAACGATACCCTAACTCAC 59.901 45.833 0.00 0.00 0.00 3.51
114 115 2.424601 TCCAACGATACCCTAACTCACG 59.575 50.000 0.00 0.00 0.00 4.35
115 116 2.190981 CAACGATACCCTAACTCACGC 58.809 52.381 0.00 0.00 0.00 5.34
116 117 0.743097 ACGATACCCTAACTCACGCC 59.257 55.000 0.00 0.00 0.00 5.68
117 118 0.031721 CGATACCCTAACTCACGCCC 59.968 60.000 0.00 0.00 0.00 6.13
118 119 1.117150 GATACCCTAACTCACGCCCA 58.883 55.000 0.00 0.00 0.00 5.36
119 120 0.828677 ATACCCTAACTCACGCCCAC 59.171 55.000 0.00 0.00 0.00 4.61
120 121 0.251922 TACCCTAACTCACGCCCACT 60.252 55.000 0.00 0.00 0.00 4.00
121 122 1.218316 CCCTAACTCACGCCCACTC 59.782 63.158 0.00 0.00 0.00 3.51
122 123 1.218316 CCTAACTCACGCCCACTCC 59.782 63.158 0.00 0.00 0.00 3.85
123 124 1.258445 CCTAACTCACGCCCACTCCT 61.258 60.000 0.00 0.00 0.00 3.69
124 125 0.108615 CTAACTCACGCCCACTCCTG 60.109 60.000 0.00 0.00 0.00 3.86
125 126 1.541310 TAACTCACGCCCACTCCTGG 61.541 60.000 0.00 0.00 37.29 4.45
126 127 3.314331 CTCACGCCCACTCCTGGT 61.314 66.667 0.00 0.00 35.46 4.00
127 128 1.982395 CTCACGCCCACTCCTGGTA 60.982 63.158 0.00 0.00 35.46 3.25
128 129 1.305802 TCACGCCCACTCCTGGTAT 60.306 57.895 0.00 0.00 35.46 2.73
129 130 0.032912 TCACGCCCACTCCTGGTATA 60.033 55.000 0.00 0.00 35.46 1.47
130 131 1.048601 CACGCCCACTCCTGGTATAT 58.951 55.000 0.00 0.00 35.46 0.86
131 132 2.158430 TCACGCCCACTCCTGGTATATA 60.158 50.000 0.00 0.00 35.46 0.86
132 133 2.832129 CACGCCCACTCCTGGTATATAT 59.168 50.000 0.00 0.00 35.46 0.86
133 134 2.832129 ACGCCCACTCCTGGTATATATG 59.168 50.000 0.00 0.00 35.46 1.78
134 135 2.168521 CGCCCACTCCTGGTATATATGG 59.831 54.545 0.00 0.00 35.46 2.74
135 136 3.182152 GCCCACTCCTGGTATATATGGT 58.818 50.000 0.00 0.00 35.46 3.55
136 137 3.587506 GCCCACTCCTGGTATATATGGTT 59.412 47.826 0.00 0.00 35.46 3.67
137 138 4.323562 GCCCACTCCTGGTATATATGGTTC 60.324 50.000 0.00 0.00 35.46 3.62
138 139 4.844085 CCCACTCCTGGTATATATGGTTCA 59.156 45.833 0.00 0.00 35.46 3.18
139 140 5.280011 CCCACTCCTGGTATATATGGTTCAC 60.280 48.000 0.00 0.00 35.46 3.18
140 141 5.544176 CCACTCCTGGTATATATGGTTCACT 59.456 44.000 0.00 0.00 32.03 3.41
141 142 6.043243 CCACTCCTGGTATATATGGTTCACTT 59.957 42.308 0.00 0.00 32.03 3.16
142 143 6.931281 CACTCCTGGTATATATGGTTCACTTG 59.069 42.308 0.00 0.00 0.00 3.16
143 144 5.865085 TCCTGGTATATATGGTTCACTTGC 58.135 41.667 0.00 0.00 0.00 4.01
144 145 5.606749 TCCTGGTATATATGGTTCACTTGCT 59.393 40.000 0.00 0.00 0.00 3.91
145 146 5.934625 CCTGGTATATATGGTTCACTTGCTC 59.065 44.000 0.00 0.00 0.00 4.26
146 147 5.865085 TGGTATATATGGTTCACTTGCTCC 58.135 41.667 0.00 0.00 0.00 4.70
147 148 5.368230 TGGTATATATGGTTCACTTGCTCCA 59.632 40.000 0.00 0.00 0.00 3.86
148 149 5.934625 GGTATATATGGTTCACTTGCTCCAG 59.065 44.000 0.00 0.00 33.33 3.86
149 150 2.787473 TATGGTTCACTTGCTCCAGG 57.213 50.000 0.00 0.00 33.33 4.45
150 151 0.773644 ATGGTTCACTTGCTCCAGGT 59.226 50.000 0.00 0.00 33.33 4.00
151 152 0.108585 TGGTTCACTTGCTCCAGGTC 59.891 55.000 0.00 0.00 0.00 3.85
152 153 0.951040 GGTTCACTTGCTCCAGGTCG 60.951 60.000 0.00 0.00 0.00 4.79
153 154 0.951040 GTTCACTTGCTCCAGGTCGG 60.951 60.000 0.00 0.00 0.00 4.79
154 155 1.407656 TTCACTTGCTCCAGGTCGGT 61.408 55.000 0.00 0.00 35.57 4.69
155 156 1.374758 CACTTGCTCCAGGTCGGTC 60.375 63.158 0.00 0.00 35.57 4.79
156 157 2.266055 CTTGCTCCAGGTCGGTCC 59.734 66.667 0.00 0.00 35.57 4.46
157 158 2.525629 TTGCTCCAGGTCGGTCCA 60.526 61.111 0.00 0.00 39.02 4.02
158 159 2.111999 CTTGCTCCAGGTCGGTCCAA 62.112 60.000 0.00 0.00 39.02 3.53
159 160 1.488705 TTGCTCCAGGTCGGTCCAAT 61.489 55.000 0.00 0.00 39.02 3.16
160 161 1.450312 GCTCCAGGTCGGTCCAATG 60.450 63.158 0.00 0.00 39.02 2.82
161 162 1.899437 GCTCCAGGTCGGTCCAATGA 61.899 60.000 0.00 0.00 39.02 2.57
162 163 0.613260 CTCCAGGTCGGTCCAATGAA 59.387 55.000 0.00 0.00 39.02 2.57
163 164 1.003118 CTCCAGGTCGGTCCAATGAAA 59.997 52.381 0.00 0.00 39.02 2.69
164 165 1.165270 CCAGGTCGGTCCAATGAAAC 58.835 55.000 0.00 0.00 39.02 2.78
165 166 0.796312 CAGGTCGGTCCAATGAAACG 59.204 55.000 0.00 0.00 39.02 3.60
166 167 0.953960 AGGTCGGTCCAATGAAACGC 60.954 55.000 0.00 0.00 39.02 4.84
167 168 1.131826 GTCGGTCCAATGAAACGCG 59.868 57.895 3.53 3.53 0.00 6.01
168 169 1.005984 TCGGTCCAATGAAACGCGA 60.006 52.632 15.93 0.00 0.00 5.87
169 170 1.011968 TCGGTCCAATGAAACGCGAG 61.012 55.000 15.93 0.00 0.00 5.03
170 171 1.134694 GGTCCAATGAAACGCGAGC 59.865 57.895 15.93 1.19 0.00 5.03
171 172 1.298859 GGTCCAATGAAACGCGAGCT 61.299 55.000 15.93 0.00 0.00 4.09
172 173 0.179215 GTCCAATGAAACGCGAGCTG 60.179 55.000 15.93 0.49 0.00 4.24
173 174 1.135315 CCAATGAAACGCGAGCTGG 59.865 57.895 15.93 6.57 0.00 4.85
174 175 1.135315 CAATGAAACGCGAGCTGGG 59.865 57.895 15.93 0.00 0.00 4.45
175 176 2.690778 AATGAAACGCGAGCTGGGC 61.691 57.895 15.93 0.00 0.00 5.36
183 184 3.535962 CGAGCTGGGCCTCCTCTC 61.536 72.222 17.68 11.64 33.32 3.20
184 185 3.160748 GAGCTGGGCCTCCTCTCC 61.161 72.222 4.53 0.00 31.74 3.71
185 186 4.814041 AGCTGGGCCTCCTCTCCC 62.814 72.222 4.53 0.00 42.93 4.30
209 210 4.496336 GCCTGGGCTGGGCTGTAG 62.496 72.222 12.54 0.00 45.57 2.74
210 211 4.496336 CCTGGGCTGGGCTGTAGC 62.496 72.222 0.00 0.00 40.41 3.58
211 212 4.845580 CTGGGCTGGGCTGTAGCG 62.846 72.222 0.00 0.00 42.03 4.26
214 215 4.537433 GGCTGGGCTGTAGCGGAG 62.537 72.222 0.00 0.00 42.03 4.63
235 236 3.264845 ACCTTGGGGTCCGCCAAT 61.265 61.111 15.20 0.36 43.38 3.16
236 237 2.755469 CCTTGGGGTCCGCCAATG 60.755 66.667 15.20 9.61 36.17 2.82
237 238 2.035626 CTTGGGGTCCGCCAATGT 59.964 61.111 15.20 0.00 36.17 2.71
238 239 1.301623 CTTGGGGTCCGCCAATGTA 59.698 57.895 15.20 0.00 36.17 2.29
239 240 0.748005 CTTGGGGTCCGCCAATGTAG 60.748 60.000 15.20 1.42 36.17 2.74
240 241 1.493854 TTGGGGTCCGCCAATGTAGT 61.494 55.000 11.38 0.00 36.17 2.73
241 242 1.301954 GGGGTCCGCCAATGTAGTT 59.698 57.895 0.00 0.00 36.17 2.24
242 243 0.746923 GGGGTCCGCCAATGTAGTTC 60.747 60.000 0.00 0.00 36.17 3.01
243 244 0.746923 GGGTCCGCCAATGTAGTTCC 60.747 60.000 0.00 0.00 36.17 3.62
244 245 0.746923 GGTCCGCCAATGTAGTTCCC 60.747 60.000 0.00 0.00 34.09 3.97
245 246 1.087771 GTCCGCCAATGTAGTTCCCG 61.088 60.000 0.00 0.00 0.00 5.14
246 247 1.078708 CCGCCAATGTAGTTCCCGT 60.079 57.895 0.00 0.00 0.00 5.28
247 248 1.366111 CCGCCAATGTAGTTCCCGTG 61.366 60.000 0.00 0.00 0.00 4.94
248 249 0.390603 CGCCAATGTAGTTCCCGTGA 60.391 55.000 0.00 0.00 0.00 4.35
249 250 1.084289 GCCAATGTAGTTCCCGTGAC 58.916 55.000 0.00 0.00 0.00 3.67
250 251 1.609580 GCCAATGTAGTTCCCGTGACA 60.610 52.381 0.00 0.00 0.00 3.58
251 252 2.773487 CCAATGTAGTTCCCGTGACAA 58.227 47.619 0.00 0.00 0.00 3.18
252 253 2.742053 CCAATGTAGTTCCCGTGACAAG 59.258 50.000 0.00 0.00 0.00 3.16
253 254 2.742053 CAATGTAGTTCCCGTGACAAGG 59.258 50.000 0.00 0.00 0.00 3.61
260 261 4.913126 CCGTGACAAGGGAGTAGC 57.087 61.111 0.00 0.00 32.77 3.58
261 262 2.277858 CCGTGACAAGGGAGTAGCT 58.722 57.895 0.00 0.00 32.77 3.32
262 263 0.608640 CCGTGACAAGGGAGTAGCTT 59.391 55.000 0.00 0.00 32.77 3.74
263 264 1.673033 CCGTGACAAGGGAGTAGCTTG 60.673 57.143 0.00 0.00 32.77 4.01
264 265 1.000955 CGTGACAAGGGAGTAGCTTGT 59.999 52.381 0.00 0.00 43.04 3.16
270 271 5.562298 ACAAGGGAGTAGCTTGTCTTAAA 57.438 39.130 0.00 0.00 36.72 1.52
271 272 6.128138 ACAAGGGAGTAGCTTGTCTTAAAT 57.872 37.500 0.00 0.00 36.72 1.40
272 273 6.543735 ACAAGGGAGTAGCTTGTCTTAAATT 58.456 36.000 0.00 0.00 36.72 1.82
273 274 7.004691 ACAAGGGAGTAGCTTGTCTTAAATTT 58.995 34.615 0.00 0.00 36.72 1.82
274 275 7.040409 ACAAGGGAGTAGCTTGTCTTAAATTTG 60.040 37.037 0.00 0.00 36.72 2.32
275 276 6.543735 AGGGAGTAGCTTGTCTTAAATTTGT 58.456 36.000 0.00 0.00 0.00 2.83
276 277 6.655425 AGGGAGTAGCTTGTCTTAAATTTGTC 59.345 38.462 0.00 0.00 0.00 3.18
277 278 6.655425 GGGAGTAGCTTGTCTTAAATTTGTCT 59.345 38.462 0.00 0.00 0.00 3.41
278 279 7.822822 GGGAGTAGCTTGTCTTAAATTTGTCTA 59.177 37.037 0.00 0.00 0.00 2.59
279 280 9.216117 GGAGTAGCTTGTCTTAAATTTGTCTAA 57.784 33.333 0.00 0.00 0.00 2.10
281 282 9.998106 AGTAGCTTGTCTTAAATTTGTCTAAGA 57.002 29.630 0.00 0.00 32.90 2.10
361 362 9.793259 ATGTAAGACAAATCTTTTTAGGACTGA 57.207 29.630 0.00 0.00 42.91 3.41
362 363 9.273016 TGTAAGACAAATCTTTTTAGGACTGAG 57.727 33.333 0.00 0.00 42.91 3.35
363 364 7.751768 AAGACAAATCTTTTTAGGACTGAGG 57.248 36.000 0.00 0.00 42.91 3.86
366 367 8.437575 AGACAAATCTTTTTAGGACTGAGGTAA 58.562 33.333 0.00 0.00 0.00 2.85
380 381 8.688151 AGGACTGAGGTAATATTAGCGAATATC 58.312 37.037 16.77 10.32 37.27 1.63
383 384 9.026121 ACTGAGGTAATATTAGCGAATATCACT 57.974 33.333 16.77 10.20 37.27 3.41
396 399 5.758296 GCGAATATCACTTAGATGGTTTGGA 59.242 40.000 0.00 0.00 37.57 3.53
399 402 2.972625 TCACTTAGATGGTTTGGAGCG 58.027 47.619 0.00 0.00 0.00 5.03
420 423 4.774124 CGGATCATATGGATTGCCTATGT 58.226 43.478 2.13 0.00 36.00 2.29
426 429 7.078249 TCATATGGATTGCCTATGTACAACT 57.922 36.000 0.00 0.00 32.12 3.16
431 434 4.438744 GGATTGCCTATGTACAACTGTTGC 60.439 45.833 19.82 5.88 0.00 4.17
432 435 3.133141 TGCCTATGTACAACTGTTGCA 57.867 42.857 19.82 11.32 0.00 4.08
435 438 2.420022 CCTATGTACAACTGTTGCAGCC 59.580 50.000 19.82 6.44 34.37 4.85
442 445 0.806868 AACTGTTGCAGCCGATCATG 59.193 50.000 0.00 0.00 34.37 3.07
446 449 3.197092 TGCAGCCGATCATGCACG 61.197 61.111 11.92 4.78 46.97 5.34
447 450 3.197790 GCAGCCGATCATGCACGT 61.198 61.111 9.10 0.00 42.11 4.49
462 465 2.096980 TGCACGTACTACTGATTCGGAG 59.903 50.000 0.00 0.00 0.00 4.63
493 496 2.439701 CCCATGGCCACAGCTGAG 60.440 66.667 23.35 13.32 39.73 3.35
516 534 1.676014 GGTGGCTATCTGCTTGTCGTT 60.676 52.381 0.00 0.00 42.39 3.85
517 535 2.418197 GGTGGCTATCTGCTTGTCGTTA 60.418 50.000 0.00 0.00 42.39 3.18
518 536 2.860735 GTGGCTATCTGCTTGTCGTTAG 59.139 50.000 0.00 0.00 42.39 2.34
519 537 1.861575 GGCTATCTGCTTGTCGTTAGC 59.138 52.381 0.00 0.00 42.39 3.09
520 538 2.540515 GCTATCTGCTTGTCGTTAGCA 58.459 47.619 8.19 8.19 45.78 3.49
521 539 3.126831 GCTATCTGCTTGTCGTTAGCAT 58.873 45.455 8.76 0.33 46.63 3.79
523 541 1.725641 TCTGCTTGTCGTTAGCATGG 58.274 50.000 8.76 1.02 46.63 3.66
526 544 0.727398 GCTTGTCGTTAGCATGGTCC 59.273 55.000 0.00 0.00 38.51 4.46
527 545 1.369625 CTTGTCGTTAGCATGGTCCC 58.630 55.000 0.00 0.00 0.00 4.46
528 546 0.687920 TTGTCGTTAGCATGGTCCCA 59.312 50.000 0.00 0.00 0.00 4.37
529 547 0.687920 TGTCGTTAGCATGGTCCCAA 59.312 50.000 0.00 0.00 0.00 4.12
545 571 4.021925 AACGGGTCTGCTGGCTCC 62.022 66.667 0.00 0.00 0.00 4.70
555 581 3.160047 CTGGCTCCGGGCTCTCAT 61.160 66.667 13.58 0.00 41.46 2.90
556 582 3.457625 CTGGCTCCGGGCTCTCATG 62.458 68.421 13.58 0.00 41.46 3.07
623 662 1.747355 AGAAAGCAATGAATCCAGCGG 59.253 47.619 0.00 0.00 0.00 5.52
624 663 1.474077 GAAAGCAATGAATCCAGCGGT 59.526 47.619 0.00 0.00 0.00 5.68
625 664 1.098050 AAGCAATGAATCCAGCGGTC 58.902 50.000 0.00 0.00 0.00 4.79
626 665 0.035152 AGCAATGAATCCAGCGGTCA 60.035 50.000 0.00 0.00 0.00 4.02
627 666 0.379669 GCAATGAATCCAGCGGTCAG 59.620 55.000 0.00 0.00 0.00 3.51
660 699 2.780643 CATCGGCGTTCACTGCTG 59.219 61.111 6.85 0.00 40.13 4.41
742 808 4.811024 GCATCGAGTGAATTATTGGAGACA 59.189 41.667 0.00 0.00 39.83 3.41
778 868 3.386768 ACGTGGAATTGATATCTCCCG 57.613 47.619 3.98 10.42 0.00 5.14
794 884 1.628238 CCCGCCCACCACCACTAATA 61.628 60.000 0.00 0.00 0.00 0.98
800 890 3.244457 GCCCACCACCACTAATATCTACC 60.244 52.174 0.00 0.00 0.00 3.18
801 891 4.232091 CCCACCACCACTAATATCTACCT 58.768 47.826 0.00 0.00 0.00 3.08
802 892 5.399991 CCCACCACCACTAATATCTACCTA 58.600 45.833 0.00 0.00 0.00 3.08
803 893 5.245526 CCCACCACCACTAATATCTACCTAC 59.754 48.000 0.00 0.00 0.00 3.18
805 895 5.048224 CACCACCACTAATATCTACCTACCG 60.048 48.000 0.00 0.00 0.00 4.02
806 896 5.075493 CCACCACTAATATCTACCTACCGT 58.925 45.833 0.00 0.00 0.00 4.83
807 897 6.183361 ACCACCACTAATATCTACCTACCGTA 60.183 42.308 0.00 0.00 0.00 4.02
808 898 6.150140 CCACCACTAATATCTACCTACCGTAC 59.850 46.154 0.00 0.00 0.00 3.67
809 899 6.150140 CACCACTAATATCTACCTACCGTACC 59.850 46.154 0.00 0.00 0.00 3.34
810 900 5.649831 CCACTAATATCTACCTACCGTACCC 59.350 48.000 0.00 0.00 0.00 3.69
811 901 5.649831 CACTAATATCTACCTACCGTACCCC 59.350 48.000 0.00 0.00 0.00 4.95
812 902 5.553557 ACTAATATCTACCTACCGTACCCCT 59.446 44.000 0.00 0.00 0.00 4.79
813 903 2.967745 ATCTACCTACCGTACCCCTC 57.032 55.000 0.00 0.00 0.00 4.30
814 904 1.898863 TCTACCTACCGTACCCCTCT 58.101 55.000 0.00 0.00 0.00 3.69
815 905 1.771255 TCTACCTACCGTACCCCTCTC 59.229 57.143 0.00 0.00 0.00 3.20
816 906 1.773653 CTACCTACCGTACCCCTCTCT 59.226 57.143 0.00 0.00 0.00 3.10
817 907 0.550432 ACCTACCGTACCCCTCTCTC 59.450 60.000 0.00 0.00 0.00 3.20
818 908 0.534652 CCTACCGTACCCCTCTCTCG 60.535 65.000 0.00 0.00 0.00 4.04
819 909 1.153086 TACCGTACCCCTCTCTCGC 60.153 63.158 0.00 0.00 0.00 5.03
820 910 1.630126 TACCGTACCCCTCTCTCGCT 61.630 60.000 0.00 0.00 0.00 4.93
821 911 2.188161 CCGTACCCCTCTCTCGCTC 61.188 68.421 0.00 0.00 0.00 5.03
822 912 1.153127 CGTACCCCTCTCTCGCTCT 60.153 63.158 0.00 0.00 0.00 4.09
823 913 1.161563 CGTACCCCTCTCTCGCTCTC 61.162 65.000 0.00 0.00 0.00 3.20
824 914 0.181824 GTACCCCTCTCTCGCTCTCT 59.818 60.000 0.00 0.00 0.00 3.10
825 915 0.470766 TACCCCTCTCTCGCTCTCTC 59.529 60.000 0.00 0.00 0.00 3.20
826 916 1.279025 ACCCCTCTCTCGCTCTCTCT 61.279 60.000 0.00 0.00 0.00 3.10
827 917 0.535102 CCCCTCTCTCGCTCTCTCTC 60.535 65.000 0.00 0.00 0.00 3.20
828 918 0.469917 CCCTCTCTCGCTCTCTCTCT 59.530 60.000 0.00 0.00 0.00 3.10
829 919 1.541233 CCCTCTCTCGCTCTCTCTCTC 60.541 61.905 0.00 0.00 0.00 3.20
830 920 1.414181 CCTCTCTCGCTCTCTCTCTCT 59.586 57.143 0.00 0.00 0.00 3.10
831 921 2.546795 CCTCTCTCGCTCTCTCTCTCTC 60.547 59.091 0.00 0.00 0.00 3.20
832 922 2.363680 CTCTCTCGCTCTCTCTCTCTCT 59.636 54.545 0.00 0.00 0.00 3.10
833 923 2.362397 TCTCTCGCTCTCTCTCTCTCTC 59.638 54.545 0.00 0.00 0.00 3.20
834 924 2.363680 CTCTCGCTCTCTCTCTCTCTCT 59.636 54.545 0.00 0.00 0.00 3.10
835 925 2.362397 TCTCGCTCTCTCTCTCTCTCTC 59.638 54.545 0.00 0.00 0.00 3.20
836 926 2.363680 CTCGCTCTCTCTCTCTCTCTCT 59.636 54.545 0.00 0.00 0.00 3.10
837 927 2.362397 TCGCTCTCTCTCTCTCTCTCTC 59.638 54.545 0.00 0.00 0.00 3.20
838 928 2.363680 CGCTCTCTCTCTCTCTCTCTCT 59.636 54.545 0.00 0.00 0.00 3.10
839 929 3.551863 CGCTCTCTCTCTCTCTCTCTCTC 60.552 56.522 0.00 0.00 0.00 3.20
840 930 3.640967 GCTCTCTCTCTCTCTCTCTCTCT 59.359 52.174 0.00 0.00 0.00 3.10
841 931 4.261994 GCTCTCTCTCTCTCTCTCTCTCTC 60.262 54.167 0.00 0.00 0.00 3.20
853 943 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
884 1229 2.913617 GCCTATATAAACCCCTGCCTCT 59.086 50.000 0.00 0.00 0.00 3.69
895 1260 1.610102 CCCTGCCTCTTCTTGTGTCTG 60.610 57.143 0.00 0.00 0.00 3.51
926 1300 0.464036 CATTGCTAGCCCCACGTAGA 59.536 55.000 13.29 0.00 0.00 2.59
927 1301 0.464452 ATTGCTAGCCCCACGTAGAC 59.536 55.000 13.29 0.00 0.00 2.59
958 1346 1.944024 CGAGCTCTGTCGGTTCTCTAT 59.056 52.381 12.85 0.00 36.26 1.98
959 1347 2.032377 CGAGCTCTGTCGGTTCTCTATC 60.032 54.545 12.85 0.00 36.26 2.08
960 1348 3.211045 GAGCTCTGTCGGTTCTCTATCT 58.789 50.000 6.43 0.00 0.00 1.98
961 1349 4.382291 GAGCTCTGTCGGTTCTCTATCTA 58.618 47.826 6.43 0.00 0.00 1.98
971 1359 3.442273 GGTTCTCTATCTAGCATCTCCGG 59.558 52.174 0.00 0.00 0.00 5.14
972 1360 4.076394 GTTCTCTATCTAGCATCTCCGGT 58.924 47.826 0.00 0.00 0.00 5.28
989 1377 1.206072 GTGTGAAGCGAGCAAGCAG 59.794 57.895 6.21 0.00 40.15 4.24
991 1379 0.947660 TGTGAAGCGAGCAAGCAGAG 60.948 55.000 6.21 0.00 40.15 3.35
1009 1403 0.257328 AGAGAGAGAGATGGCGTCCA 59.743 55.000 2.37 1.01 38.19 4.02
1023 1417 3.381983 TCCACTCGTCGCATGGCT 61.382 61.111 9.15 0.00 33.20 4.75
1050 1450 2.428085 GGCCGTCCTCCTTCTCCTC 61.428 68.421 0.00 0.00 0.00 3.71
1088 1488 4.248842 TACGCCCGCCCATCCATG 62.249 66.667 0.00 0.00 0.00 3.66
1091 1491 4.839706 GCCCGCCCATCCATGGTT 62.840 66.667 12.58 0.00 46.65 3.67
1092 1492 2.519302 CCCGCCCATCCATGGTTC 60.519 66.667 12.58 0.00 46.65 3.62
1093 1493 2.519302 CCGCCCATCCATGGTTCC 60.519 66.667 12.58 0.00 46.65 3.62
1094 1494 2.597340 CGCCCATCCATGGTTCCT 59.403 61.111 12.58 0.00 46.65 3.36
1095 1495 1.825191 CGCCCATCCATGGTTCCTG 60.825 63.158 12.58 5.59 46.65 3.86
1096 1496 1.614711 GCCCATCCATGGTTCCTGA 59.385 57.895 12.58 0.00 46.65 3.86
1099 1499 1.133976 CCCATCCATGGTTCCTGACTC 60.134 57.143 12.58 0.00 46.65 3.36
1100 1500 1.133976 CCATCCATGGTTCCTGACTCC 60.134 57.143 12.58 0.00 43.05 3.85
1104 1537 1.065854 CCATGGTTCCTGACTCCTGAC 60.066 57.143 2.57 0.00 0.00 3.51
1117 1550 0.900421 TCCTGACCATCTGTGCTCAG 59.100 55.000 9.54 9.54 42.54 3.35
1129 1562 5.767816 TCTGTGCTCAGCGATACTTAATA 57.232 39.130 10.95 0.00 41.10 0.98
1131 1564 6.749139 TCTGTGCTCAGCGATACTTAATAAT 58.251 36.000 10.95 0.00 41.10 1.28
1134 1567 8.294341 TGTGCTCAGCGATACTTAATAATTAC 57.706 34.615 0.00 0.00 0.00 1.89
1338 1781 0.955919 AAGCGGACCTGCTAAGCAAC 60.956 55.000 10.57 0.00 46.60 4.17
1371 1819 2.990479 GTCCTCCGGTGGATGCTT 59.010 61.111 27.10 0.00 38.52 3.91
1372 1820 1.450312 GTCCTCCGGTGGATGCTTG 60.450 63.158 27.10 0.00 38.52 4.01
1373 1821 2.825836 CCTCCGGTGGATGCTTGC 60.826 66.667 17.99 0.00 0.00 4.01
1375 1823 1.522092 CTCCGGTGGATGCTTGCTA 59.478 57.895 0.00 0.00 0.00 3.49
1376 1824 0.811616 CTCCGGTGGATGCTTGCTAC 60.812 60.000 0.00 0.00 0.00 3.58
1377 1825 1.221840 CCGGTGGATGCTTGCTACT 59.778 57.895 0.00 0.00 0.00 2.57
1379 1827 1.091771 CGGTGGATGCTTGCTACTGG 61.092 60.000 0.00 0.00 0.00 4.00
1382 1830 1.225704 GGATGCTTGCTACTGGGCT 59.774 57.895 0.00 0.00 0.00 5.19
1423 1875 4.276431 CCTTAGATCTGTTCGTCCCTACTC 59.724 50.000 5.18 0.00 0.00 2.59
1424 1876 2.657143 AGATCTGTTCGTCCCTACTCC 58.343 52.381 0.00 0.00 0.00 3.85
1425 1877 1.334243 GATCTGTTCGTCCCTACTCCG 59.666 57.143 0.00 0.00 0.00 4.63
1426 1878 0.037303 TCTGTTCGTCCCTACTCCGT 59.963 55.000 0.00 0.00 0.00 4.69
1427 1879 0.450983 CTGTTCGTCCCTACTCCGTC 59.549 60.000 0.00 0.00 0.00 4.79
1429 1881 1.278985 TGTTCGTCCCTACTCCGTCTA 59.721 52.381 0.00 0.00 0.00 2.59
1430 1882 2.092753 TGTTCGTCCCTACTCCGTCTAT 60.093 50.000 0.00 0.00 0.00 1.98
1431 1883 2.948315 GTTCGTCCCTACTCCGTCTATT 59.052 50.000 0.00 0.00 0.00 1.73
1432 1884 3.287867 TCGTCCCTACTCCGTCTATTT 57.712 47.619 0.00 0.00 0.00 1.40
1433 1885 3.209410 TCGTCCCTACTCCGTCTATTTC 58.791 50.000 0.00 0.00 0.00 2.17
1434 1886 2.292845 CGTCCCTACTCCGTCTATTTCC 59.707 54.545 0.00 0.00 0.00 3.13
1435 1887 3.294214 GTCCCTACTCCGTCTATTTCCA 58.706 50.000 0.00 0.00 0.00 3.53
1439 1891 5.070047 TCCCTACTCCGTCTATTTCCATTTC 59.930 44.000 0.00 0.00 0.00 2.17
1453 1905 3.078837 TCCATTTCCTTTACGTTGCTCC 58.921 45.455 0.00 0.00 0.00 4.70
1455 1907 4.020039 TCCATTTCCTTTACGTTGCTCCTA 60.020 41.667 0.00 0.00 0.00 2.94
1484 1936 8.723942 ATGACTGAAAATAAAGTAGCTACCTG 57.276 34.615 20.31 8.67 0.00 4.00
1487 1939 6.371825 ACTGAAAATAAAGTAGCTACCTGCAC 59.628 38.462 20.31 0.00 45.94 4.57
1492 1944 1.038130 AGTAGCTACCTGCACCCTCG 61.038 60.000 20.31 0.00 45.94 4.63
1506 1958 2.753966 CCTCGGCATTGGCTGTTCG 61.754 63.158 8.71 0.00 46.81 3.95
1507 1959 2.031919 TCGGCATTGGCTGTTCGT 59.968 55.556 8.71 0.00 46.81 3.85
1516 1968 0.320050 TGGCTGTTCGTCTGCATGTA 59.680 50.000 0.00 0.00 41.72 2.29
1517 1969 1.066215 TGGCTGTTCGTCTGCATGTAT 60.066 47.619 0.00 0.00 41.72 2.29
1518 1970 1.328680 GGCTGTTCGTCTGCATGTATG 59.671 52.381 0.00 0.00 41.72 2.39
1574 2026 5.064579 TGTTGATGTAATAACGATGCCACTG 59.935 40.000 0.00 0.00 0.00 3.66
1593 2045 5.392380 CCACTGACAATTTGGCTTCTATGTC 60.392 44.000 3.47 0.00 38.08 3.06
1602 2054 3.411446 TGGCTTCTATGTCTTGTGTTGG 58.589 45.455 0.00 0.00 0.00 3.77
1608 2060 6.238759 GCTTCTATGTCTTGTGTTGGAACTTT 60.239 38.462 0.00 0.00 0.00 2.66
1615 2067 5.973565 GTCTTGTGTTGGAACTTTGAATCAG 59.026 40.000 0.00 0.00 0.00 2.90
1616 2068 4.305989 TGTGTTGGAACTTTGAATCAGC 57.694 40.909 0.00 0.00 0.00 4.26
1617 2069 3.698539 TGTGTTGGAACTTTGAATCAGCA 59.301 39.130 0.00 0.00 0.00 4.41
1622 2077 3.960102 TGGAACTTTGAATCAGCAGGTTT 59.040 39.130 0.00 0.00 0.00 3.27
1646 2101 1.197036 GGCTTGTCTGTTAAACGGAGC 59.803 52.381 0.00 0.00 33.48 4.70
1647 2102 1.136336 GCTTGTCTGTTAAACGGAGCG 60.136 52.381 0.00 0.00 33.48 5.03
1652 2107 2.097056 GTCTGTTAAACGGAGCGAACAC 60.097 50.000 0.00 0.00 33.48 3.32
1655 2110 2.937799 TGTTAAACGGAGCGAACACTTT 59.062 40.909 0.00 0.00 0.00 2.66
1697 2152 2.138320 CTGCGAGAGAAACAGAGCAAA 58.862 47.619 0.00 0.00 34.04 3.68
1698 2153 2.545526 CTGCGAGAGAAACAGAGCAAAA 59.454 45.455 0.00 0.00 34.04 2.44
1730 2185 1.068541 AGCGAAACGAATTTCCCAAGC 60.069 47.619 0.00 0.00 41.12 4.01
1734 2189 3.058224 CGAAACGAATTTCCCAAGCTTCT 60.058 43.478 0.00 0.00 41.12 2.85
1737 2192 3.486383 ACGAATTTCCCAAGCTTCTCAA 58.514 40.909 0.00 0.00 0.00 3.02
1742 2197 6.127897 CGAATTTCCCAAGCTTCTCAACTATT 60.128 38.462 0.00 0.00 0.00 1.73
1749 2204 7.724061 TCCCAAGCTTCTCAACTATTTTAACTT 59.276 33.333 0.00 0.00 0.00 2.66
1930 2414 9.445786 AAATACACGTTGAACATAGTTTTCAAG 57.554 29.630 0.00 0.00 42.27 3.02
1932 2416 7.542534 ACACGTTGAACATAGTTTTCAAGTA 57.457 32.000 0.00 0.00 42.27 2.24
1938 2422 9.382244 GTTGAACATAGTTTTCAAGTACATGTC 57.618 33.333 0.00 0.00 42.27 3.06
1939 2423 8.669946 TGAACATAGTTTTCAAGTACATGTCA 57.330 30.769 0.00 0.00 29.89 3.58
1942 2426 9.950680 AACATAGTTTTCAAGTACATGTCAAAG 57.049 29.630 0.00 0.00 0.00 2.77
1943 2427 9.337396 ACATAGTTTTCAAGTACATGTCAAAGA 57.663 29.630 0.00 0.00 0.00 2.52
1947 2431 9.736023 AGTTTTCAAGTACATGTCAAAGAATTC 57.264 29.630 0.00 0.00 0.00 2.17
1948 2432 8.682016 GTTTTCAAGTACATGTCAAAGAATTCG 58.318 33.333 0.00 0.00 0.00 3.34
1949 2433 7.722795 TTCAAGTACATGTCAAAGAATTCGA 57.277 32.000 0.00 0.00 0.00 3.71
1950 2434 7.722795 TCAAGTACATGTCAAAGAATTCGAA 57.277 32.000 0.00 0.00 0.00 3.71
1951 2435 7.796838 TCAAGTACATGTCAAAGAATTCGAAG 58.203 34.615 0.00 0.00 0.00 3.79
1952 2436 7.655732 TCAAGTACATGTCAAAGAATTCGAAGA 59.344 33.333 0.00 0.00 0.00 2.87
1953 2437 7.352719 AGTACATGTCAAAGAATTCGAAGAC 57.647 36.000 0.00 15.66 34.32 3.01
1954 2438 6.929049 AGTACATGTCAAAGAATTCGAAGACA 59.071 34.615 22.75 22.75 39.90 3.41
1955 2439 5.990408 ACATGTCAAAGAATTCGAAGACAC 58.010 37.500 22.88 9.15 38.62 3.67
1956 2440 5.527214 ACATGTCAAAGAATTCGAAGACACA 59.473 36.000 22.88 13.23 38.62 3.72
1957 2441 6.205464 ACATGTCAAAGAATTCGAAGACACAT 59.795 34.615 22.88 14.47 38.62 3.21
1958 2442 6.618287 TGTCAAAGAATTCGAAGACACATT 57.382 33.333 19.15 0.00 34.32 2.71
1959 2443 6.429624 TGTCAAAGAATTCGAAGACACATTG 58.570 36.000 19.15 7.80 34.32 2.82
1960 2444 5.853282 GTCAAAGAATTCGAAGACACATTGG 59.147 40.000 16.88 0.00 34.32 3.16
1961 2445 5.762711 TCAAAGAATTCGAAGACACATTGGA 59.237 36.000 3.35 0.00 34.32 3.53
1962 2446 6.430925 TCAAAGAATTCGAAGACACATTGGAT 59.569 34.615 3.35 0.00 34.32 3.41
2013 2499 8.046294 TGTAAAGATTGTTTGCACCGTATAAT 57.954 30.769 0.00 0.00 0.00 1.28
2091 2577 9.645059 TTCTAATGTCACAAAACATTTGTTTGA 57.355 25.926 9.29 1.43 45.29 2.69
2092 2578 9.645059 TCTAATGTCACAAAACATTTGTTTGAA 57.355 25.926 9.29 0.00 45.29 2.69
2171 2669 6.206395 TGAACATTCTTTGAACAGCTGAAA 57.794 33.333 23.35 9.84 0.00 2.69
2173 2671 7.095910 TGAACATTCTTTGAACAGCTGAAAAA 58.904 30.769 23.35 15.50 0.00 1.94
2197 2695 4.749245 AATGAGTCACGGACAATGTTTC 57.251 40.909 0.00 0.00 34.60 2.78
2210 2708 6.255887 CGGACAATGTTTCTCTGAATAGTACC 59.744 42.308 0.00 0.00 0.00 3.34
2213 2711 9.167311 GACAATGTTTCTCTGAATAGTACCAAT 57.833 33.333 0.00 0.00 0.00 3.16
2230 2730 8.378172 AGTACCAATATTTATGATGTTCACCG 57.622 34.615 0.00 0.00 0.00 4.94
2244 2744 0.943673 TCACCGTTGATGTTGCACAG 59.056 50.000 0.00 0.00 0.00 3.66
2246 2746 1.081242 CCGTTGATGTTGCACAGGC 60.081 57.895 0.00 0.00 41.68 4.85
2252 2752 1.589716 GATGTTGCACAGGCCCAGAC 61.590 60.000 0.00 0.00 40.13 3.51
2256 2756 0.035152 TTGCACAGGCCCAGACTATG 60.035 55.000 0.00 0.00 40.13 2.23
2257 2757 1.821332 GCACAGGCCCAGACTATGC 60.821 63.158 0.00 0.00 0.00 3.14
2262 2762 2.158755 ACAGGCCCAGACTATGCATAAC 60.159 50.000 8.00 5.28 0.00 1.89
2269 2769 5.686124 GCCCAGACTATGCATAACTCTTCTT 60.686 44.000 8.00 0.00 0.00 2.52
2271 2771 7.151308 CCCAGACTATGCATAACTCTTCTTAG 58.849 42.308 8.00 0.00 0.00 2.18
2275 2775 8.629158 AGACTATGCATAACTCTTCTTAGACAG 58.371 37.037 8.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.305635 TCTTGCTGATTCAACCTGGCTA 59.694 45.455 0.00 0.00 0.00 3.93
1 2 1.074405 TCTTGCTGATTCAACCTGGCT 59.926 47.619 0.00 0.00 0.00 4.75
2 3 1.538047 TCTTGCTGATTCAACCTGGC 58.462 50.000 0.00 0.00 0.00 4.85
3 4 3.057033 CCTTTCTTGCTGATTCAACCTGG 60.057 47.826 0.00 0.00 0.00 4.45
4 5 3.057033 CCCTTTCTTGCTGATTCAACCTG 60.057 47.826 0.00 0.00 0.00 4.00
5 6 3.160269 CCCTTTCTTGCTGATTCAACCT 58.840 45.455 0.00 0.00 0.00 3.50
6 7 2.232208 CCCCTTTCTTGCTGATTCAACC 59.768 50.000 0.00 0.00 0.00 3.77
7 8 3.157087 TCCCCTTTCTTGCTGATTCAAC 58.843 45.455 0.00 0.00 0.00 3.18
8 9 3.524095 TCCCCTTTCTTGCTGATTCAA 57.476 42.857 0.00 0.00 0.00 2.69
9 10 3.624777 GATCCCCTTTCTTGCTGATTCA 58.375 45.455 0.00 0.00 0.00 2.57
10 11 2.615912 CGATCCCCTTTCTTGCTGATTC 59.384 50.000 0.00 0.00 0.00 2.52
11 12 2.648059 CGATCCCCTTTCTTGCTGATT 58.352 47.619 0.00 0.00 0.00 2.57
12 13 1.133976 CCGATCCCCTTTCTTGCTGAT 60.134 52.381 0.00 0.00 0.00 2.90
13 14 0.253044 CCGATCCCCTTTCTTGCTGA 59.747 55.000 0.00 0.00 0.00 4.26
14 15 0.749454 CCCGATCCCCTTTCTTGCTG 60.749 60.000 0.00 0.00 0.00 4.41
15 16 0.914417 TCCCGATCCCCTTTCTTGCT 60.914 55.000 0.00 0.00 0.00 3.91
16 17 0.183731 ATCCCGATCCCCTTTCTTGC 59.816 55.000 0.00 0.00 0.00 4.01
17 18 2.736670 AATCCCGATCCCCTTTCTTG 57.263 50.000 0.00 0.00 0.00 3.02
18 19 4.045022 TCTAAATCCCGATCCCCTTTCTT 58.955 43.478 0.00 0.00 0.00 2.52
19 20 3.648545 CTCTAAATCCCGATCCCCTTTCT 59.351 47.826 0.00 0.00 0.00 2.52
20 21 3.807561 GCTCTAAATCCCGATCCCCTTTC 60.808 52.174 0.00 0.00 0.00 2.62
21 22 2.106684 GCTCTAAATCCCGATCCCCTTT 59.893 50.000 0.00 0.00 0.00 3.11
22 23 1.700186 GCTCTAAATCCCGATCCCCTT 59.300 52.381 0.00 0.00 0.00 3.95
23 24 1.353091 GCTCTAAATCCCGATCCCCT 58.647 55.000 0.00 0.00 0.00 4.79
24 25 0.325272 GGCTCTAAATCCCGATCCCC 59.675 60.000 0.00 0.00 0.00 4.81
25 26 0.037232 CGGCTCTAAATCCCGATCCC 60.037 60.000 0.00 0.00 44.55 3.85
26 27 0.037232 CCGGCTCTAAATCCCGATCC 60.037 60.000 0.00 0.00 44.55 3.36
27 28 0.037232 CCCGGCTCTAAATCCCGATC 60.037 60.000 0.00 0.00 44.55 3.69
28 29 1.481056 CCCCGGCTCTAAATCCCGAT 61.481 60.000 0.00 0.00 44.55 4.18
29 30 2.138179 CCCCGGCTCTAAATCCCGA 61.138 63.158 0.00 0.00 44.55 5.14
30 31 2.426023 CCCCGGCTCTAAATCCCG 59.574 66.667 0.00 0.00 41.60 5.14
31 32 2.076803 ACCCCCGGCTCTAAATCCC 61.077 63.158 0.00 0.00 0.00 3.85
32 33 1.148498 CACCCCCGGCTCTAAATCC 59.852 63.158 0.00 0.00 0.00 3.01
33 34 1.148498 CCACCCCCGGCTCTAAATC 59.852 63.158 0.00 0.00 0.00 2.17
34 35 2.383601 CCCACCCCCGGCTCTAAAT 61.384 63.158 0.00 0.00 0.00 1.40
35 36 3.012722 CCCACCCCCGGCTCTAAA 61.013 66.667 0.00 0.00 0.00 1.85
36 37 3.995809 CTCCCACCCCCGGCTCTAA 62.996 68.421 0.00 0.00 0.00 2.10
37 38 4.475444 CTCCCACCCCCGGCTCTA 62.475 72.222 0.00 0.00 0.00 2.43
43 44 2.615191 TATCCTTCCTCCCACCCCCG 62.615 65.000 0.00 0.00 0.00 5.73
44 45 1.060743 GTATCCTTCCTCCCACCCCC 61.061 65.000 0.00 0.00 0.00 5.40
45 46 0.327191 TGTATCCTTCCTCCCACCCC 60.327 60.000 0.00 0.00 0.00 4.95
46 47 1.700186 GATGTATCCTTCCTCCCACCC 59.300 57.143 0.00 0.00 0.00 4.61
47 48 1.344763 CGATGTATCCTTCCTCCCACC 59.655 57.143 0.00 0.00 0.00 4.61
48 49 1.270358 GCGATGTATCCTTCCTCCCAC 60.270 57.143 0.00 0.00 0.00 4.61
49 50 1.048601 GCGATGTATCCTTCCTCCCA 58.951 55.000 0.00 0.00 0.00 4.37
50 51 0.321996 GGCGATGTATCCTTCCTCCC 59.678 60.000 0.00 0.00 0.00 4.30
51 52 0.321996 GGGCGATGTATCCTTCCTCC 59.678 60.000 0.00 0.00 0.00 4.30
52 53 1.048601 TGGGCGATGTATCCTTCCTC 58.951 55.000 0.00 0.00 0.00 3.71
53 54 1.141053 GTTGGGCGATGTATCCTTCCT 59.859 52.381 0.00 0.00 0.00 3.36
54 55 1.594331 GTTGGGCGATGTATCCTTCC 58.406 55.000 0.00 0.00 0.00 3.46
55 56 1.217882 CGTTGGGCGATGTATCCTTC 58.782 55.000 0.00 0.00 44.77 3.46
56 57 0.179056 CCGTTGGGCGATGTATCCTT 60.179 55.000 0.00 0.00 44.77 3.36
57 58 1.445942 CCGTTGGGCGATGTATCCT 59.554 57.895 0.00 0.00 44.77 3.24
58 59 4.043168 CCGTTGGGCGATGTATCC 57.957 61.111 0.00 0.00 44.77 2.59
71 72 4.329545 ATCACTGGTGGCGCCGTT 62.330 61.111 23.90 0.00 41.21 4.44
72 73 4.760047 GATCACTGGTGGCGCCGT 62.760 66.667 23.90 10.84 41.21 5.68
73 74 4.457496 AGATCACTGGTGGCGCCG 62.457 66.667 23.90 10.06 41.21 6.46
74 75 2.599645 ATCAGATCACTGGTGGCGCC 62.600 60.000 22.73 22.73 43.60 6.53
75 76 1.153289 ATCAGATCACTGGTGGCGC 60.153 57.895 0.00 0.00 43.60 6.53
76 77 0.531532 GGATCAGATCACTGGTGGCG 60.532 60.000 12.66 0.00 43.60 5.69
77 78 0.543277 TGGATCAGATCACTGGTGGC 59.457 55.000 12.66 0.00 43.60 5.01
78 79 2.636830 GTTGGATCAGATCACTGGTGG 58.363 52.381 12.66 0.00 43.60 4.61
79 80 2.094026 TCGTTGGATCAGATCACTGGTG 60.094 50.000 12.66 0.00 43.60 4.17
80 81 2.179427 TCGTTGGATCAGATCACTGGT 58.821 47.619 12.66 0.00 43.60 4.00
81 82 2.967599 TCGTTGGATCAGATCACTGG 57.032 50.000 12.66 0.00 43.60 4.00
82 83 4.302455 GGTATCGTTGGATCAGATCACTG 58.698 47.826 12.66 0.00 44.66 3.66
83 84 3.322254 GGGTATCGTTGGATCAGATCACT 59.678 47.826 12.66 0.00 34.00 3.41
84 85 3.322254 AGGGTATCGTTGGATCAGATCAC 59.678 47.826 12.66 2.05 34.00 3.06
85 86 3.576861 AGGGTATCGTTGGATCAGATCA 58.423 45.455 12.66 0.00 34.00 2.92
86 87 5.244178 AGTTAGGGTATCGTTGGATCAGATC 59.756 44.000 1.18 1.18 34.00 2.75
87 88 5.148502 AGTTAGGGTATCGTTGGATCAGAT 58.851 41.667 0.00 0.00 34.00 2.90
88 89 4.543689 AGTTAGGGTATCGTTGGATCAGA 58.456 43.478 0.00 0.00 34.00 3.27
89 90 4.341235 TGAGTTAGGGTATCGTTGGATCAG 59.659 45.833 0.00 0.00 34.00 2.90
90 91 4.098960 GTGAGTTAGGGTATCGTTGGATCA 59.901 45.833 0.00 0.00 34.00 2.92
91 92 4.618965 GTGAGTTAGGGTATCGTTGGATC 58.381 47.826 0.00 0.00 34.00 3.36
92 93 3.067742 CGTGAGTTAGGGTATCGTTGGAT 59.932 47.826 0.00 0.00 36.65 3.41
93 94 2.424601 CGTGAGTTAGGGTATCGTTGGA 59.575 50.000 0.00 0.00 0.00 3.53
94 95 2.805845 CGTGAGTTAGGGTATCGTTGG 58.194 52.381 0.00 0.00 0.00 3.77
95 96 2.190981 GCGTGAGTTAGGGTATCGTTG 58.809 52.381 0.00 0.00 0.00 4.10
96 97 1.135721 GGCGTGAGTTAGGGTATCGTT 59.864 52.381 0.00 0.00 0.00 3.85
97 98 0.743097 GGCGTGAGTTAGGGTATCGT 59.257 55.000 0.00 0.00 0.00 3.73
98 99 0.031721 GGGCGTGAGTTAGGGTATCG 59.968 60.000 0.00 0.00 0.00 2.92
99 100 1.117150 TGGGCGTGAGTTAGGGTATC 58.883 55.000 0.00 0.00 0.00 2.24
100 101 0.828677 GTGGGCGTGAGTTAGGGTAT 59.171 55.000 0.00 0.00 0.00 2.73
101 102 0.251922 AGTGGGCGTGAGTTAGGGTA 60.252 55.000 0.00 0.00 0.00 3.69
102 103 1.535687 AGTGGGCGTGAGTTAGGGT 60.536 57.895 0.00 0.00 0.00 4.34
103 104 1.218316 GAGTGGGCGTGAGTTAGGG 59.782 63.158 0.00 0.00 0.00 3.53
104 105 1.218316 GGAGTGGGCGTGAGTTAGG 59.782 63.158 0.00 0.00 0.00 2.69
105 106 0.108615 CAGGAGTGGGCGTGAGTTAG 60.109 60.000 0.00 0.00 0.00 2.34
106 107 1.541310 CCAGGAGTGGGCGTGAGTTA 61.541 60.000 0.00 0.00 40.67 2.24
107 108 2.743718 CAGGAGTGGGCGTGAGTT 59.256 61.111 0.00 0.00 0.00 3.01
108 109 3.314331 CCAGGAGTGGGCGTGAGT 61.314 66.667 0.00 0.00 40.67 3.41
117 118 6.672266 AGTGAACCATATATACCAGGAGTG 57.328 41.667 0.00 0.00 0.00 3.51
118 119 6.464465 GCAAGTGAACCATATATACCAGGAGT 60.464 42.308 0.00 0.00 0.00 3.85
119 120 5.934625 GCAAGTGAACCATATATACCAGGAG 59.065 44.000 0.00 0.00 0.00 3.69
120 121 5.606749 AGCAAGTGAACCATATATACCAGGA 59.393 40.000 0.00 0.00 0.00 3.86
121 122 5.869579 AGCAAGTGAACCATATATACCAGG 58.130 41.667 0.00 0.00 0.00 4.45
122 123 5.934625 GGAGCAAGTGAACCATATATACCAG 59.065 44.000 0.00 0.00 0.00 4.00
123 124 5.368230 TGGAGCAAGTGAACCATATATACCA 59.632 40.000 0.00 0.00 0.00 3.25
124 125 5.865085 TGGAGCAAGTGAACCATATATACC 58.135 41.667 0.00 0.00 0.00 2.73
125 126 5.934625 CCTGGAGCAAGTGAACCATATATAC 59.065 44.000 0.00 0.00 0.00 1.47
126 127 5.606749 ACCTGGAGCAAGTGAACCATATATA 59.393 40.000 0.00 0.00 0.00 0.86
127 128 4.413520 ACCTGGAGCAAGTGAACCATATAT 59.586 41.667 0.00 0.00 0.00 0.86
128 129 3.780294 ACCTGGAGCAAGTGAACCATATA 59.220 43.478 0.00 0.00 0.00 0.86
129 130 2.578021 ACCTGGAGCAAGTGAACCATAT 59.422 45.455 0.00 0.00 0.00 1.78
130 131 1.985159 ACCTGGAGCAAGTGAACCATA 59.015 47.619 0.00 0.00 0.00 2.74
131 132 0.773644 ACCTGGAGCAAGTGAACCAT 59.226 50.000 0.00 0.00 0.00 3.55
132 133 0.108585 GACCTGGAGCAAGTGAACCA 59.891 55.000 0.00 0.00 0.00 3.67
133 134 0.951040 CGACCTGGAGCAAGTGAACC 60.951 60.000 0.00 0.00 0.00 3.62
134 135 0.951040 CCGACCTGGAGCAAGTGAAC 60.951 60.000 0.00 0.00 42.00 3.18
135 136 1.371183 CCGACCTGGAGCAAGTGAA 59.629 57.895 0.00 0.00 42.00 3.18
136 137 1.816863 GACCGACCTGGAGCAAGTGA 61.817 60.000 0.00 0.00 42.00 3.41
137 138 1.374758 GACCGACCTGGAGCAAGTG 60.375 63.158 0.00 0.00 42.00 3.16
138 139 2.584391 GGACCGACCTGGAGCAAGT 61.584 63.158 0.00 0.00 42.00 3.16
139 140 2.111999 TTGGACCGACCTGGAGCAAG 62.112 60.000 0.00 0.00 42.00 4.01
140 141 1.488705 ATTGGACCGACCTGGAGCAA 61.489 55.000 0.00 0.00 42.00 3.91
141 142 1.918293 ATTGGACCGACCTGGAGCA 60.918 57.895 0.00 0.00 42.00 4.26
142 143 1.450312 CATTGGACCGACCTGGAGC 60.450 63.158 0.00 0.00 42.00 4.70
143 144 0.613260 TTCATTGGACCGACCTGGAG 59.387 55.000 0.00 0.00 42.00 3.86
144 145 1.060729 TTTCATTGGACCGACCTGGA 58.939 50.000 0.00 0.00 42.00 3.86
145 146 1.165270 GTTTCATTGGACCGACCTGG 58.835 55.000 0.00 0.00 46.41 4.45
146 147 0.796312 CGTTTCATTGGACCGACCTG 59.204 55.000 0.00 0.00 39.86 4.00
147 148 0.953960 GCGTTTCATTGGACCGACCT 60.954 55.000 0.00 0.00 39.86 3.85
148 149 1.500396 GCGTTTCATTGGACCGACC 59.500 57.895 0.00 0.00 39.54 4.79
149 150 1.131826 CGCGTTTCATTGGACCGAC 59.868 57.895 0.00 0.00 0.00 4.79
150 151 1.005984 TCGCGTTTCATTGGACCGA 60.006 52.632 5.77 0.00 0.00 4.69
151 152 1.419922 CTCGCGTTTCATTGGACCG 59.580 57.895 5.77 0.00 0.00 4.79
152 153 1.134694 GCTCGCGTTTCATTGGACC 59.865 57.895 5.77 0.00 0.00 4.46
153 154 0.179215 CAGCTCGCGTTTCATTGGAC 60.179 55.000 5.77 0.00 0.00 4.02
154 155 1.298157 CCAGCTCGCGTTTCATTGGA 61.298 55.000 5.77 0.00 0.00 3.53
155 156 1.135315 CCAGCTCGCGTTTCATTGG 59.865 57.895 5.77 3.28 0.00 3.16
156 157 1.135315 CCCAGCTCGCGTTTCATTG 59.865 57.895 5.77 0.00 0.00 2.82
157 158 2.690778 GCCCAGCTCGCGTTTCATT 61.691 57.895 5.77 0.00 0.00 2.57
158 159 3.127533 GCCCAGCTCGCGTTTCAT 61.128 61.111 5.77 0.00 0.00 2.57
166 167 3.535962 GAGAGGAGGCCCAGCTCG 61.536 72.222 0.00 0.00 33.88 5.03
167 168 3.160748 GGAGAGGAGGCCCAGCTC 61.161 72.222 0.00 1.04 36.20 4.09
168 169 4.814041 GGGAGAGGAGGCCCAGCT 62.814 72.222 0.00 0.00 44.07 4.24
193 194 4.496336 GCTACAGCCCAGCCCAGG 62.496 72.222 0.00 0.00 32.68 4.45
194 195 4.845580 CGCTACAGCCCAGCCCAG 62.846 72.222 0.00 0.00 37.91 4.45
197 198 4.537433 CTCCGCTACAGCCCAGCC 62.537 72.222 0.00 0.00 37.91 4.85
203 204 4.874977 GGTCGGCTCCGCTACAGC 62.875 72.222 2.96 0.00 39.59 4.40
204 205 2.711922 AAGGTCGGCTCCGCTACAG 61.712 63.158 2.96 0.00 39.59 2.74
205 206 2.678934 AAGGTCGGCTCCGCTACA 60.679 61.111 2.96 0.00 39.59 2.74
206 207 2.202756 CAAGGTCGGCTCCGCTAC 60.203 66.667 2.96 0.00 39.59 3.58
207 208 3.458163 CCAAGGTCGGCTCCGCTA 61.458 66.667 2.96 0.00 39.59 4.26
222 223 1.493854 AACTACATTGGCGGACCCCA 61.494 55.000 0.00 0.00 33.59 4.96
223 224 0.746923 GAACTACATTGGCGGACCCC 60.747 60.000 0.00 0.00 33.59 4.95
224 225 0.746923 GGAACTACATTGGCGGACCC 60.747 60.000 0.00 0.00 33.59 4.46
225 226 0.746923 GGGAACTACATTGGCGGACC 60.747 60.000 0.00 0.00 0.00 4.46
226 227 1.087771 CGGGAACTACATTGGCGGAC 61.088 60.000 0.00 0.00 0.00 4.79
227 228 1.219664 CGGGAACTACATTGGCGGA 59.780 57.895 0.00 0.00 0.00 5.54
228 229 1.078708 ACGGGAACTACATTGGCGG 60.079 57.895 0.00 0.00 0.00 6.13
229 230 0.390603 TCACGGGAACTACATTGGCG 60.391 55.000 0.00 0.00 0.00 5.69
230 231 1.084289 GTCACGGGAACTACATTGGC 58.916 55.000 0.00 0.00 0.00 4.52
231 232 2.465860 TGTCACGGGAACTACATTGG 57.534 50.000 0.00 0.00 0.00 3.16
232 233 2.742053 CCTTGTCACGGGAACTACATTG 59.258 50.000 0.00 0.00 0.00 2.82
233 234 2.290071 CCCTTGTCACGGGAACTACATT 60.290 50.000 8.81 0.00 44.90 2.71
234 235 1.278127 CCCTTGTCACGGGAACTACAT 59.722 52.381 8.81 0.00 44.90 2.29
235 236 0.682852 CCCTTGTCACGGGAACTACA 59.317 55.000 8.81 0.00 44.90 2.74
236 237 3.527434 CCCTTGTCACGGGAACTAC 57.473 57.895 8.81 0.00 44.90 2.73
242 243 1.218316 GCTACTCCCTTGTCACGGG 59.782 63.158 8.15 8.15 43.38 5.28
243 244 0.608640 AAGCTACTCCCTTGTCACGG 59.391 55.000 0.00 0.00 0.00 4.94
244 245 1.714794 CAAGCTACTCCCTTGTCACG 58.285 55.000 0.00 0.00 35.97 4.35
249 250 7.040409 ACAAATTTAAGACAAGCTACTCCCTTG 60.040 37.037 0.00 0.00 43.98 3.61
250 251 7.004691 ACAAATTTAAGACAAGCTACTCCCTT 58.995 34.615 0.00 0.00 0.00 3.95
251 252 6.543735 ACAAATTTAAGACAAGCTACTCCCT 58.456 36.000 0.00 0.00 0.00 4.20
252 253 6.655425 AGACAAATTTAAGACAAGCTACTCCC 59.345 38.462 0.00 0.00 0.00 4.30
253 254 7.674471 AGACAAATTTAAGACAAGCTACTCC 57.326 36.000 0.00 0.00 0.00 3.85
255 256 9.998106 TCTTAGACAAATTTAAGACAAGCTACT 57.002 29.630 0.00 0.00 32.50 2.57
335 336 9.793259 TCAGTCCTAAAAAGATTTGTCTTACAT 57.207 29.630 0.00 0.00 0.00 2.29
336 337 9.273016 CTCAGTCCTAAAAAGATTTGTCTTACA 57.727 33.333 0.00 0.00 0.00 2.41
337 338 8.722394 CCTCAGTCCTAAAAAGATTTGTCTTAC 58.278 37.037 0.00 0.00 0.00 2.34
338 339 8.437575 ACCTCAGTCCTAAAAAGATTTGTCTTA 58.562 33.333 0.00 0.00 0.00 2.10
339 340 7.290813 ACCTCAGTCCTAAAAAGATTTGTCTT 58.709 34.615 0.00 0.00 0.00 3.01
340 341 6.842676 ACCTCAGTCCTAAAAAGATTTGTCT 58.157 36.000 0.00 0.00 0.00 3.41
341 342 8.617290 TTACCTCAGTCCTAAAAAGATTTGTC 57.383 34.615 0.00 0.00 0.00 3.18
348 349 8.979574 CGCTAATATTACCTCAGTCCTAAAAAG 58.020 37.037 0.00 0.00 0.00 2.27
349 350 8.698210 TCGCTAATATTACCTCAGTCCTAAAAA 58.302 33.333 0.00 0.00 0.00 1.94
350 351 8.241497 TCGCTAATATTACCTCAGTCCTAAAA 57.759 34.615 0.00 0.00 0.00 1.52
351 352 7.828508 TCGCTAATATTACCTCAGTCCTAAA 57.171 36.000 0.00 0.00 0.00 1.85
352 353 7.828508 TTCGCTAATATTACCTCAGTCCTAA 57.171 36.000 0.00 0.00 0.00 2.69
353 354 9.696572 ATATTCGCTAATATTACCTCAGTCCTA 57.303 33.333 0.00 0.00 35.19 2.94
354 355 6.919775 ATTCGCTAATATTACCTCAGTCCT 57.080 37.500 0.00 0.00 0.00 3.85
355 356 8.467598 TGATATTCGCTAATATTACCTCAGTCC 58.532 37.037 5.07 0.00 38.21 3.85
356 357 9.291664 GTGATATTCGCTAATATTACCTCAGTC 57.708 37.037 12.35 0.00 38.05 3.51
357 358 9.026121 AGTGATATTCGCTAATATTACCTCAGT 57.974 33.333 17.19 7.34 41.84 3.41
358 359 9.862371 AAGTGATATTCGCTAATATTACCTCAG 57.138 33.333 17.19 0.00 41.84 3.35
380 381 2.009774 CCGCTCCAAACCATCTAAGTG 58.990 52.381 0.00 0.00 0.00 3.16
383 384 2.503765 TGATCCGCTCCAAACCATCTAA 59.496 45.455 0.00 0.00 0.00 2.10
396 399 1.632409 AGGCAATCCATATGATCCGCT 59.368 47.619 3.65 0.00 34.06 5.52
399 402 6.653020 TGTACATAGGCAATCCATATGATCC 58.347 40.000 3.65 0.00 32.54 3.36
420 423 1.270571 TGATCGGCTGCAACAGTTGTA 60.271 47.619 14.88 9.51 33.43 2.41
426 429 1.674980 TGCATGATCGGCTGCAACA 60.675 52.632 13.18 0.00 44.87 3.33
431 434 0.528466 AGTACGTGCATGATCGGCTG 60.528 55.000 14.17 5.82 0.00 4.85
432 435 1.029681 TAGTACGTGCATGATCGGCT 58.970 50.000 14.17 6.04 0.00 5.52
435 438 3.334272 TCAGTAGTACGTGCATGATCG 57.666 47.619 14.17 2.34 0.00 3.69
442 445 2.717530 CTCCGAATCAGTAGTACGTGC 58.282 52.381 0.00 0.00 0.00 5.34
444 447 1.329906 CGCTCCGAATCAGTAGTACGT 59.670 52.381 0.00 0.00 0.00 3.57
445 448 1.596260 TCGCTCCGAATCAGTAGTACG 59.404 52.381 0.00 0.00 31.06 3.67
446 449 2.613133 ACTCGCTCCGAATCAGTAGTAC 59.387 50.000 0.00 0.00 34.74 2.73
447 450 2.612672 CACTCGCTCCGAATCAGTAGTA 59.387 50.000 0.00 0.00 34.74 1.82
526 544 4.335647 AGCCAGCAGACCCGTTGG 62.336 66.667 0.00 0.00 40.05 3.77
527 545 2.743928 GAGCCAGCAGACCCGTTG 60.744 66.667 0.00 0.00 0.00 4.10
528 546 4.021925 GGAGCCAGCAGACCCGTT 62.022 66.667 0.00 0.00 0.00 4.44
545 571 0.318529 CGATGAGACATGAGAGCCCG 60.319 60.000 0.00 0.00 0.00 6.13
550 576 3.194329 ACTTCTTGCGATGAGACATGAGA 59.806 43.478 0.00 0.00 0.00 3.27
551 577 3.306434 CACTTCTTGCGATGAGACATGAG 59.694 47.826 0.00 0.00 0.00 2.90
552 578 3.056607 TCACTTCTTGCGATGAGACATGA 60.057 43.478 0.00 0.00 0.00 3.07
553 579 3.061831 GTCACTTCTTGCGATGAGACATG 59.938 47.826 0.00 0.00 36.02 3.21
554 580 3.056250 AGTCACTTCTTGCGATGAGACAT 60.056 43.478 0.00 0.00 37.37 3.06
555 581 2.297315 AGTCACTTCTTGCGATGAGACA 59.703 45.455 0.00 0.00 37.37 3.41
556 582 2.953020 AGTCACTTCTTGCGATGAGAC 58.047 47.619 0.00 0.00 36.13 3.36
623 662 1.856265 CTTTTCCCTGCCACGCTGAC 61.856 60.000 0.00 0.00 0.00 3.51
624 663 1.600636 CTTTTCCCTGCCACGCTGA 60.601 57.895 0.00 0.00 0.00 4.26
625 664 2.956987 CTTTTCCCTGCCACGCTG 59.043 61.111 0.00 0.00 0.00 5.18
626 665 2.985847 GCTTTTCCCTGCCACGCT 60.986 61.111 0.00 0.00 0.00 5.07
627 666 2.548127 GATGCTTTTCCCTGCCACGC 62.548 60.000 0.00 0.00 0.00 5.34
628 667 1.508088 GATGCTTTTCCCTGCCACG 59.492 57.895 0.00 0.00 0.00 4.94
629 668 1.508088 CGATGCTTTTCCCTGCCAC 59.492 57.895 0.00 0.00 0.00 5.01
630 669 1.678635 CCGATGCTTTTCCCTGCCA 60.679 57.895 0.00 0.00 0.00 4.92
631 670 3.068729 GCCGATGCTTTTCCCTGCC 62.069 63.158 0.00 0.00 33.53 4.85
632 671 2.491621 GCCGATGCTTTTCCCTGC 59.508 61.111 0.00 0.00 33.53 4.85
637 676 0.517316 AGTGAACGCCGATGCTTTTC 59.483 50.000 0.00 0.00 34.43 2.29
660 699 3.973267 GAGTGGAGCTCGTCGGCAC 62.973 68.421 7.83 9.68 34.13 5.01
778 868 3.244457 GGTAGATATTAGTGGTGGTGGGC 60.244 52.174 0.00 0.00 0.00 5.36
794 884 2.374839 GAGAGGGGTACGGTAGGTAGAT 59.625 54.545 0.00 0.00 0.00 1.98
800 890 1.165284 GCGAGAGAGGGGTACGGTAG 61.165 65.000 0.00 0.00 0.00 3.18
801 891 1.153086 GCGAGAGAGGGGTACGGTA 60.153 63.158 0.00 0.00 0.00 4.02
802 892 2.439883 GCGAGAGAGGGGTACGGT 60.440 66.667 0.00 0.00 0.00 4.83
803 893 2.124236 AGCGAGAGAGGGGTACGG 60.124 66.667 0.00 0.00 0.00 4.02
805 895 0.181824 AGAGAGCGAGAGAGGGGTAC 59.818 60.000 0.00 0.00 0.00 3.34
806 896 0.470766 GAGAGAGCGAGAGAGGGGTA 59.529 60.000 0.00 0.00 0.00 3.69
807 897 1.226262 GAGAGAGCGAGAGAGGGGT 59.774 63.158 0.00 0.00 0.00 4.95
808 898 0.535102 GAGAGAGAGCGAGAGAGGGG 60.535 65.000 0.00 0.00 0.00 4.79
809 899 0.469917 AGAGAGAGAGCGAGAGAGGG 59.530 60.000 0.00 0.00 0.00 4.30
810 900 1.414181 AGAGAGAGAGAGCGAGAGAGG 59.586 57.143 0.00 0.00 0.00 3.69
811 901 2.363680 AGAGAGAGAGAGAGCGAGAGAG 59.636 54.545 0.00 0.00 0.00 3.20
812 902 2.362397 GAGAGAGAGAGAGAGCGAGAGA 59.638 54.545 0.00 0.00 0.00 3.10
813 903 2.363680 AGAGAGAGAGAGAGAGCGAGAG 59.636 54.545 0.00 0.00 0.00 3.20
814 904 2.362397 GAGAGAGAGAGAGAGAGCGAGA 59.638 54.545 0.00 0.00 0.00 4.04
815 905 2.363680 AGAGAGAGAGAGAGAGAGCGAG 59.636 54.545 0.00 0.00 0.00 5.03
816 906 2.362397 GAGAGAGAGAGAGAGAGAGCGA 59.638 54.545 0.00 0.00 0.00 4.93
817 907 2.363680 AGAGAGAGAGAGAGAGAGAGCG 59.636 54.545 0.00 0.00 0.00 5.03
818 908 3.640967 AGAGAGAGAGAGAGAGAGAGAGC 59.359 52.174 0.00 0.00 0.00 4.09
819 909 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
820 910 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
821 911 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
822 912 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
823 913 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
824 914 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
825 915 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
826 916 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
827 917 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
828 918 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
829 919 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
830 920 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
831 921 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
832 922 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
833 923 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
834 924 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
835 925 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
836 926 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
837 927 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
838 928 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
839 929 5.009911 CAGAGAGAGAGAGAGAGAGAGAGAG 59.990 52.000 0.00 0.00 0.00 3.20
840 930 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
841 931 4.501229 GCAGAGAGAGAGAGAGAGAGAGAG 60.501 54.167 0.00 0.00 0.00 3.20
853 943 5.420739 GGGGTTTATATAGGCAGAGAGAGAG 59.579 48.000 0.00 0.00 0.00 3.20
895 1260 1.305219 TAGCAATGCGAAGGTGGTGC 61.305 55.000 0.00 0.00 0.00 5.01
958 1346 1.751351 CTTCACACCGGAGATGCTAGA 59.249 52.381 9.46 0.00 0.00 2.43
959 1347 1.804372 GCTTCACACCGGAGATGCTAG 60.804 57.143 9.46 5.36 0.00 3.42
960 1348 0.175760 GCTTCACACCGGAGATGCTA 59.824 55.000 9.46 0.00 0.00 3.49
961 1349 1.078848 GCTTCACACCGGAGATGCT 60.079 57.895 9.46 0.00 0.00 3.79
971 1359 1.206072 CTGCTTGCTCGCTTCACAC 59.794 57.895 0.00 0.00 0.00 3.82
972 1360 0.947660 CTCTGCTTGCTCGCTTCACA 60.948 55.000 0.00 0.00 0.00 3.58
989 1377 0.951558 GGACGCCATCTCTCTCTCTC 59.048 60.000 0.00 0.00 0.00 3.20
991 1379 0.383949 GTGGACGCCATCTCTCTCTC 59.616 60.000 1.90 0.00 35.28 3.20
1032 1426 2.364448 AGGAGAAGGAGGACGGCC 60.364 66.667 0.00 0.00 0.00 6.13
1044 1441 1.077357 GACGAGCAGGAGGAGGAGA 60.077 63.158 0.00 0.00 0.00 3.71
1082 1482 1.842562 CAGGAGTCAGGAACCATGGAT 59.157 52.381 21.47 6.44 0.00 3.41
1086 1486 1.280457 GGTCAGGAGTCAGGAACCAT 58.720 55.000 0.00 0.00 0.00 3.55
1088 1488 1.208293 GATGGTCAGGAGTCAGGAACC 59.792 57.143 0.00 0.00 0.00 3.62
1091 1491 1.077828 ACAGATGGTCAGGAGTCAGGA 59.922 52.381 0.00 0.00 0.00 3.86
1092 1492 1.206610 CACAGATGGTCAGGAGTCAGG 59.793 57.143 0.00 0.00 0.00 3.86
1093 1493 1.405256 GCACAGATGGTCAGGAGTCAG 60.405 57.143 0.00 0.00 0.00 3.51
1094 1494 0.610174 GCACAGATGGTCAGGAGTCA 59.390 55.000 0.00 0.00 0.00 3.41
1095 1495 0.901124 AGCACAGATGGTCAGGAGTC 59.099 55.000 0.00 0.00 0.00 3.36
1096 1496 3.079480 AGCACAGATGGTCAGGAGT 57.921 52.632 0.00 0.00 0.00 3.85
1104 1537 1.068281 AGTATCGCTGAGCACAGATGG 59.932 52.381 15.88 3.34 46.03 3.51
1117 1550 8.009974 CCACAGCAAGTAATTATTAAGTATCGC 58.990 37.037 0.00 0.00 0.00 4.58
1129 1562 4.309099 CAATGCAACCACAGCAAGTAATT 58.691 39.130 0.00 0.00 46.27 1.40
1131 1564 2.545532 GCAATGCAACCACAGCAAGTAA 60.546 45.455 0.00 0.00 46.27 2.24
1134 1567 0.249531 TGCAATGCAACCACAGCAAG 60.250 50.000 5.01 0.00 46.27 4.01
1363 1811 1.077501 GCCCAGTAGCAAGCATCCA 60.078 57.895 0.00 0.00 0.00 3.41
1371 1819 4.785575 TGCTCTAGCCCAGTAGCA 57.214 55.556 0.00 0.00 42.41 3.49
1372 1820 0.320050 GGATGCTCTAGCCCAGTAGC 59.680 60.000 0.00 0.00 41.18 3.58
1373 1821 1.709578 TGGATGCTCTAGCCCAGTAG 58.290 55.000 0.00 0.00 41.18 2.57
1375 1823 0.763652 CATGGATGCTCTAGCCCAGT 59.236 55.000 0.00 0.00 41.18 4.00
1376 1824 3.627645 CATGGATGCTCTAGCCCAG 57.372 57.895 0.00 0.00 41.18 4.45
1400 1852 4.208746 AGTAGGGACGAACAGATCTAAGG 58.791 47.826 0.00 0.00 0.00 2.69
1401 1853 4.276431 GGAGTAGGGACGAACAGATCTAAG 59.724 50.000 0.00 0.00 0.00 2.18
1423 1875 5.583457 ACGTAAAGGAAATGGAAATAGACGG 59.417 40.000 0.00 0.00 0.00 4.79
1424 1876 6.657836 ACGTAAAGGAAATGGAAATAGACG 57.342 37.500 0.00 0.00 0.00 4.18
1425 1877 6.745907 GCAACGTAAAGGAAATGGAAATAGAC 59.254 38.462 0.00 0.00 0.00 2.59
1426 1878 6.657541 AGCAACGTAAAGGAAATGGAAATAGA 59.342 34.615 0.00 0.00 0.00 1.98
1427 1879 6.852664 AGCAACGTAAAGGAAATGGAAATAG 58.147 36.000 0.00 0.00 0.00 1.73
1429 1881 5.336451 GGAGCAACGTAAAGGAAATGGAAAT 60.336 40.000 0.00 0.00 0.00 2.17
1430 1882 4.022676 GGAGCAACGTAAAGGAAATGGAAA 60.023 41.667 0.00 0.00 0.00 3.13
1431 1883 3.504520 GGAGCAACGTAAAGGAAATGGAA 59.495 43.478 0.00 0.00 0.00 3.53
1432 1884 3.078837 GGAGCAACGTAAAGGAAATGGA 58.921 45.455 0.00 0.00 0.00 3.41
1433 1885 3.081804 AGGAGCAACGTAAAGGAAATGG 58.918 45.455 0.00 0.00 0.00 3.16
1434 1886 4.332819 CCTAGGAGCAACGTAAAGGAAATG 59.667 45.833 1.05 0.00 0.00 2.32
1435 1887 4.514401 CCTAGGAGCAACGTAAAGGAAAT 58.486 43.478 1.05 0.00 0.00 2.17
1439 1891 1.829222 TCCCTAGGAGCAACGTAAAGG 59.171 52.381 11.48 0.00 0.00 3.11
1453 1905 8.207545 AGCTACTTTATTTTCAGTCATCCCTAG 58.792 37.037 0.00 0.00 0.00 3.02
1455 1907 6.963322 AGCTACTTTATTTTCAGTCATCCCT 58.037 36.000 0.00 0.00 0.00 4.20
1487 1939 2.361610 AACAGCCAATGCCGAGGG 60.362 61.111 0.00 0.00 38.69 4.30
1492 1944 1.503542 CAGACGAACAGCCAATGCC 59.496 57.895 0.00 0.00 38.69 4.40
1516 1968 2.031157 GCCACGAACACTTAAACAGCAT 60.031 45.455 0.00 0.00 0.00 3.79
1517 1969 1.332375 GCCACGAACACTTAAACAGCA 59.668 47.619 0.00 0.00 0.00 4.41
1518 1970 1.602377 AGCCACGAACACTTAAACAGC 59.398 47.619 0.00 0.00 0.00 4.40
1519 1971 3.963383 AAGCCACGAACACTTAAACAG 57.037 42.857 0.00 0.00 0.00 3.16
1523 1975 5.354792 ACAAACTAAAGCCACGAACACTTAA 59.645 36.000 0.00 0.00 0.00 1.85
1532 1984 1.333619 ACAGCACAAACTAAAGCCACG 59.666 47.619 0.00 0.00 0.00 4.94
1533 1985 3.115554 CAACAGCACAAACTAAAGCCAC 58.884 45.455 0.00 0.00 0.00 5.01
1574 2026 6.088824 CACAAGACATAGAAGCCAAATTGTC 58.911 40.000 0.00 0.00 34.99 3.18
1593 2045 4.741676 GCTGATTCAAAGTTCCAACACAAG 59.258 41.667 0.00 0.00 0.00 3.16
1602 2054 4.936891 ACAAACCTGCTGATTCAAAGTTC 58.063 39.130 0.00 0.00 0.00 3.01
1608 2060 1.340889 GCCAACAAACCTGCTGATTCA 59.659 47.619 0.00 0.00 0.00 2.57
1615 2067 0.746659 AGACAAGCCAACAAACCTGC 59.253 50.000 0.00 0.00 0.00 4.85
1616 2068 1.750778 ACAGACAAGCCAACAAACCTG 59.249 47.619 0.00 0.00 0.00 4.00
1617 2069 2.143876 ACAGACAAGCCAACAAACCT 57.856 45.000 0.00 0.00 0.00 3.50
1622 2077 2.356382 CCGTTTAACAGACAAGCCAACA 59.644 45.455 0.00 0.00 0.00 3.33
1677 2132 1.788258 TTGCTCTGTTTCTCTCGCAG 58.212 50.000 0.00 0.00 0.00 5.18
1679 2134 3.609103 TTTTTGCTCTGTTTCTCTCGC 57.391 42.857 0.00 0.00 0.00 5.03
1698 2153 7.867445 AATTCGTTTCGCTACATGAATTTTT 57.133 28.000 0.00 0.00 33.57 1.94
1700 2155 6.526674 GGAAATTCGTTTCGCTACATGAATTT 59.473 34.615 13.95 13.95 44.28 1.82
1701 2156 6.027749 GGAAATTCGTTTCGCTACATGAATT 58.972 36.000 0.00 0.11 37.57 2.17
1702 2157 5.448632 GGGAAATTCGTTTCGCTACATGAAT 60.449 40.000 0.00 0.00 39.75 2.57
1713 2168 4.023193 TGAGAAGCTTGGGAAATTCGTTTC 60.023 41.667 2.10 0.00 0.00 2.78
1718 2173 6.765915 ATAGTTGAGAAGCTTGGGAAATTC 57.234 37.500 2.10 0.00 0.00 2.17
1721 2176 6.976934 AAAATAGTTGAGAAGCTTGGGAAA 57.023 33.333 2.10 0.00 0.00 3.13
1730 2185 7.530861 GCACGTCAAGTTAAAATAGTTGAGAAG 59.469 37.037 0.00 0.00 37.95 2.85
1734 2189 6.606234 TGCACGTCAAGTTAAAATAGTTGA 57.394 33.333 0.00 0.00 35.63 3.18
1737 2192 6.795098 TCATGCACGTCAAGTTAAAATAGT 57.205 33.333 0.00 0.00 0.00 2.12
1742 2197 4.793071 CCATTCATGCACGTCAAGTTAAA 58.207 39.130 0.00 0.00 0.00 1.52
1749 2204 0.036105 AGAGCCATTCATGCACGTCA 60.036 50.000 0.00 0.00 0.00 4.35
1913 2397 9.114952 TGACATGTACTTGAAAACTATGTTCAA 57.885 29.630 15.13 0.20 41.50 2.69
1914 2398 8.669946 TGACATGTACTTGAAAACTATGTTCA 57.330 30.769 15.13 2.30 33.21 3.18
1922 2406 8.682016 CGAATTCTTTGACATGTACTTGAAAAC 58.318 33.333 15.13 4.92 0.00 2.43
1930 2414 7.010023 GTGTCTTCGAATTCTTTGACATGTAC 58.990 38.462 15.85 3.35 36.91 2.90
1932 2416 5.527214 TGTGTCTTCGAATTCTTTGACATGT 59.473 36.000 15.85 0.00 36.91 3.21
1938 2422 6.000891 TCCAATGTGTCTTCGAATTCTTTG 57.999 37.500 0.00 4.89 0.00 2.77
1939 2423 6.824305 ATCCAATGTGTCTTCGAATTCTTT 57.176 33.333 0.00 0.00 0.00 2.52
1942 2426 7.873739 AAAAATCCAATGTGTCTTCGAATTC 57.126 32.000 0.00 0.00 0.00 2.17
1988 2472 5.950758 ATACGGTGCAAACAATCTTTACA 57.049 34.783 0.00 0.00 0.00 2.41
1989 2473 8.178964 TGATTATACGGTGCAAACAATCTTTAC 58.821 33.333 0.00 0.00 0.00 2.01
1994 2480 7.985634 AAATGATTATACGGTGCAAACAATC 57.014 32.000 0.00 0.00 0.00 2.67
2143 2641 6.866770 CAGCTGTTCAAAGAATGTTCATGATT 59.133 34.615 5.25 0.00 0.00 2.57
2144 2642 6.208007 TCAGCTGTTCAAAGAATGTTCATGAT 59.792 34.615 14.67 0.00 0.00 2.45
2173 2671 5.514274 AACATTGTCCGTGACTCATTTTT 57.486 34.783 5.77 0.00 33.15 1.94
2174 2672 5.299279 AGAAACATTGTCCGTGACTCATTTT 59.701 36.000 5.77 1.76 33.15 1.82
2175 2673 4.821805 AGAAACATTGTCCGTGACTCATTT 59.178 37.500 5.77 2.46 33.15 2.32
2176 2674 4.389374 AGAAACATTGTCCGTGACTCATT 58.611 39.130 5.77 0.00 33.15 2.57
2177 2675 3.997021 GAGAAACATTGTCCGTGACTCAT 59.003 43.478 5.77 0.00 33.15 2.90
2178 2676 3.069586 AGAGAAACATTGTCCGTGACTCA 59.930 43.478 0.00 0.00 33.15 3.41
2179 2677 3.430218 CAGAGAAACATTGTCCGTGACTC 59.570 47.826 5.77 0.00 33.15 3.36
2181 2679 3.390135 TCAGAGAAACATTGTCCGTGAC 58.610 45.455 0.00 0.00 0.00 3.67
2182 2680 3.744238 TCAGAGAAACATTGTCCGTGA 57.256 42.857 0.00 0.00 0.00 4.35
2183 2681 5.639506 ACTATTCAGAGAAACATTGTCCGTG 59.360 40.000 0.00 0.00 0.00 4.94
2184 2682 5.794894 ACTATTCAGAGAAACATTGTCCGT 58.205 37.500 0.00 0.00 0.00 4.69
2185 2683 6.255887 GGTACTATTCAGAGAAACATTGTCCG 59.744 42.308 0.00 0.00 0.00 4.79
2186 2684 7.103641 TGGTACTATTCAGAGAAACATTGTCC 58.896 38.462 0.00 0.00 0.00 4.02
2210 2708 9.172820 CATCAACGGTGAACATCATAAATATTG 57.827 33.333 7.51 0.00 37.30 1.90
2213 2711 7.857734 ACATCAACGGTGAACATCATAAATA 57.142 32.000 7.51 0.00 37.30 1.40
2218 2716 3.366273 GCAACATCAACGGTGAACATCAT 60.366 43.478 7.51 0.00 37.30 2.45
2219 2717 2.031245 GCAACATCAACGGTGAACATCA 60.031 45.455 7.51 0.00 37.30 3.07
2220 2718 2.031245 TGCAACATCAACGGTGAACATC 60.031 45.455 7.51 0.00 37.30 3.06
2221 2719 1.952990 TGCAACATCAACGGTGAACAT 59.047 42.857 7.51 0.00 37.30 2.71
2222 2720 1.064803 GTGCAACATCAACGGTGAACA 59.935 47.619 7.51 0.00 37.30 3.18
2244 2744 2.370189 AGAGTTATGCATAGTCTGGGCC 59.630 50.000 16.17 0.00 0.00 5.80
2246 2746 5.543507 AGAAGAGTTATGCATAGTCTGGG 57.456 43.478 17.15 0.00 0.00 4.45
2252 2752 8.845227 TCTCTGTCTAAGAAGAGTTATGCATAG 58.155 37.037 6.50 0.00 40.70 2.23
2256 2756 8.816144 CATTTCTCTGTCTAAGAAGAGTTATGC 58.184 37.037 0.00 0.00 40.70 3.14
2257 2757 9.868277 ACATTTCTCTGTCTAAGAAGAGTTATG 57.132 33.333 0.00 0.00 40.70 1.90
2262 2762 6.648310 TGCAACATTTCTCTGTCTAAGAAGAG 59.352 38.462 0.00 0.00 41.13 2.85
2269 2769 4.633126 GCATCTGCAACATTTCTCTGTCTA 59.367 41.667 0.00 0.00 41.59 2.59
2271 2771 3.756069 GCATCTGCAACATTTCTCTGTC 58.244 45.455 0.00 0.00 41.59 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.